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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06660 AT2G30820 AT2G30820 |
| fragaria_vesca | FvH4_6g38770 FvH4_6g38770 FvH4_6g38770 |
| malus_domestica | MD00G1163200.v1.1 MD00G1163300.v1.1 MD09G1146900.v1.1 MD17G1133500.v1.1 |
| prunus_persica | Prupe.3G178400_v2.0.a1 Prupe.3G178400_v2.0.a1 |
| pyrus_communis | pycom09g06740 pycom17g12800 |
| rosa_chinensis | RchiOBHm_Chr2g0152321 |
| rosa_laevigata | RLG00000020628 |
| rosa_multiflora | Rmu_sc0004002.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00095800 |
| rosa_rugosa | Rorug02G0432300 Rorug02G0432400 |
| rosa_samantha | Rh2AG493900 Rh2BG506200 Rh2CG480200 Rh2DG517300 |
| rosa_wichuraiana | Rw2G040620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 660 |
| Acc65I | GGTACC | 1 cut(s) | 269 |
| AccB1I | GGYRCC | 1 cut(s) | 269 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1182 |
| AccBSI | CCGCTC | 1 cut(s) | 135 |
| AciI | CCGC | 4 cut(s) | 133, 278, 513, 1023 |
| AclWI | GGATC | 3 cut(s) | 420, 884, 1236 |
| AcoI | YGGCCR | 1 cut(s) | 1078 |
| AcsI | RAATTY | 4 cut(s) | 294, 359, 628, 1204 |
| AcuI | CTGAAG | 4 cut(s) | 246, 383, 699, 1052 |
| AfaI | GTAC | 4 cut(s) | 271, 446, 523, 876 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 178, 506, 854, 969, 1124, 1182 |
| AgsI | TTSAA | 7 cut(s) | 19, 312, 364, 611, 672, 1209, 1262 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 998 |
| AjnI | CCWGG | 4 cut(s) | 688, 760, 1025, 1075 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 11, 43 |
| AleI | CACNNNNGTG | 1 cut(s) | 1177 |
| AluBI | AGCT | 4 cut(s) | 83, 224, 263, 290 |
| AluI | AGCT | 4 cut(s) | 83, 224, 263, 290 |
| Alw21I | GWGCWC | 1 cut(s) | 234 |
| Alw26I | GTCTC | 2 cut(s) | 157, 1174 |
| Alw44I | GTGCAC | 1 cut(s) | 230 |
| AlwI | GGATC | 3 cut(s) | 420, 884, 1236 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 767 |
| AoxI | GGCC | 3 cut(s) | 246, 1078, 1115 |
| ApaLI | GTGCAC | 1 cut(s) | 230 |
| ApeKI | GCWGC | 3 cut(s) | 90, 495, 510 |
| ApoI | RAATTY | 4 cut(s) | 294, 359, 628, 1204 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 968, 1000 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 466 |
| Asp718I | GGTACC | 1 cut(s) | 269 |
| AspS9I | GGNCC | 2 cut(s) | 473, 819 |
| AsuHPI | GGTGA | 4 cut(s) | 137, 926, 1164, 1249 |
| AvaII | GGWCC | 2 cut(s) | 473, 819 |
| BaeGI | GKGCMC | 1 cut(s) | 234 |
| BalI | TGGCCA | 1 cut(s) | 1080 |
| BanI | GGYRCC | 1 cut(s) | 269 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 292, 324 |
| BauI | CACGAG | 1 cut(s) | 1164 |
| BbsI | GAAGAC | 1 cut(s) | 300 |
| Bbv12I | GWGCWC | 1 cut(s) | 234 |
| BbvI | GCAGC | 3 cut(s) | 77, 507, 522 |
| BccI | CCATC | 2 cut(s) | 339, 1181 |
| BceAI | ACGGC | 1 cut(s) | 871 |
| BciT130I | CCWGG | 4 cut(s) | 690, 762, 1027, 1077 |
| BcoDI | GTCTC | 2 cut(s) | 157, 1174 |
| BfaI | CTAG | 1 cut(s) | 492 |
| BfmI | CTRYAG | 2 cut(s) | 242, 531 |
| BisI | GCNGC | 3 cut(s) | 91, 496, 511 |
| BlsI | GCNGC | 3 cut(s) | 92, 497, 512 |
| Bme1390I | CCNGG | 4 cut(s) | 690, 762, 1027, 1077 |
| Bme18I | GGWCC | 2 cut(s) | 473, 819 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 998 |
| BmgT120I | GGNCC | 2 cut(s) | 473, 819 |
| BmiI | GGNNCC | 3 cut(s) | 271, 374, 821 |
| BmrFI | CCNGG | 4 cut(s) | 690, 762, 1027, 1077 |
| BmrI | ACTGGG | 2 cut(s) | 817, 949 |
| BmsI | GCATC | 2 cut(s) | 741, 867 |
| BmuI | ACTGGG | 2 cut(s) | 817, 949 |
| BoxI | GACNNNNGTC | 1 cut(s) | 182 |
| BpiI | GAAGAC | 1 cut(s) | 300 |
| BpmI | CTGGAG | 4 cut(s) | 525, 558, 619, 672 |
| BpuEI | CTTGAG | 1 cut(s) | 1029 |
| BsaJI | CCNNGG | 1 cut(s) | 1404 |
| BsaWI | WCCGGW | 2 cut(s) | 552, 663 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 178, 506, 854, 969, 1124, 1182 |
| Bse118I | RCCGGY | 1 cut(s) | 1036 |
| Bse1I | ACTGG | 4 cut(s) | 583, 823, 944, 1148 |
| BseBI | CCWGG | 4 cut(s) | 690, 762, 1027, 1077 |
| BseDI | CCNNGG | 1 cut(s) | 1404 |
| BseGI | GGATG | 7 cut(s) | 326, 383, 424, 647, 959, 1192, 1388 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 178, 506, 854, 969, 1124, 1182 |
| BseMII | CTCAG | 5 cut(s) | 170, 471, 549, 878, 1388 |
| BseNI | ACTGG | 4 cut(s) | 583, 823, 944, 1148 |
| BseRI | GAGGAG | 1 cut(s) | 761 |
| BseSI | GKGCMC | 1 cut(s) | 234 |
| BseXI | GCAGC | 3 cut(s) | 77, 507, 522 |
| BseYI | CCCAGC | 2 cut(s) | 286, 1392 |
| BsgI | GTGCAG | 2 cut(s) | 61, 607 |
| BshFI | GGCC | 3 cut(s) | 248, 1080, 1117 |
| BshNI | GGYRCC | 1 cut(s) | 269 |
| BsiHKAI | GWGCWC | 1 cut(s) | 234 |
| BsiSI | CCGG | 3 cut(s) | 553, 664, 1037 |
| BslFI | GGGAC | 2 cut(s) | 125, 805 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 178, 506, 854, 969, 1124, 1182 |
| BsmAI | GTCTC | 2 cut(s) | 157, 1174 |
| BsmBI | CGTCTC | 1 cut(s) | 157 |
| BsmFI | GGGAC | 2 cut(s) | 125, 805 |
| BsmI | GAATGC | 1 cut(s) | 617 |
| BsnI | GGCC | 3 cut(s) | 248, 1080, 1117 |
| Bsp1286I | GDGCHC | 1 cut(s) | 234 |
| Bsp143I | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| BspACI | CCGC | 4 cut(s) | 133, 278, 513, 1023 |
| BspANI | GGCC | 3 cut(s) | 248, 1080, 1117 |
| BspCNI | CTCAG | 5 cut(s) | 169, 472, 550, 877, 1387 |
| BspHI | TCATGA | 1 cut(s) | 334 |
| BspLI | GGNNCC | 3 cut(s) | 271, 374, 821 |
| BspMAI | CTGCAG | 1 cut(s) | 246 |
| BspPI | GGATC | 3 cut(s) | 420, 884, 1236 |
| BspT107I | GGYRCC | 1 cut(s) | 269 |
| BsrBI | CCGCTC | 1 cut(s) | 135 |
| BsrFI | RCCGGY | 1 cut(s) | 1036 |
| BsrI | ACTGG | 4 cut(s) | 583, 823, 944, 1148 |
| BssAI | RCCGGY | 1 cut(s) | 1036 |
| BssECI | CCNNGG | 1 cut(s) | 1404 |
| BssMI | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| BssSI | CACGAG | 1 cut(s) | 1164 |
| Bst2BI | CACGAG | 1 cut(s) | 1164 |
| Bst2UI | CCWGG | 4 cut(s) | 690, 762, 1027, 1077 |
| Bst4CI | ACNGT | 4 cut(s) | 203, 535, 769, 1284 |
| Bst6I | CTCTTC | 4 cut(s) | 447, 533, 960, 1284 |
| BstC8I | GCNNGC | 3 cut(s) | 11, 246, 1248 |
| BstDEI | CTNAG | 5 cut(s) | 156, 480, 558, 864, 1374 |
| BstDSI | CCRYGG | 1 cut(s) | 1404 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 504 |
| BstF5I | GGATG | 7 cut(s) | 326, 383, 424, 647, 959, 1192, 1388 |
| BstKTI | GATC | 5 cut(s) | 47, 415, 424, 892, 1231 |
| BstMAI | GTCTC | 2 cut(s) | 157, 1174 |
| BstMBI | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 19, 132, 612 |
| BstNI | CCWGG | 4 cut(s) | 690, 762, 1027, 1077 |
| BstNSI | RCATGY | 1 cut(s) | 1250 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 182 |
| BstSCI | CCNGG | 4 cut(s) | 688, 760, 1025, 1075 |
| BstSFI | CTRYAG | 2 cut(s) | 242, 531 |
| BstSLI | GKGCMC | 1 cut(s) | 234 |
| BstV1I | GCAGC | 3 cut(s) | 77, 507, 522 |
| BstV2I | GAAGAC | 1 cut(s) | 300 |
| BstX2I | RGATCY | 1 cut(s) | 889 |
| BstYI | RGATCY | 1 cut(s) | 889 |
| BsuRI | GGCC | 3 cut(s) | 248, 1080, 1117 |
| BtgI | CCRYGG | 1 cut(s) | 1404 |
| BtsCI | GGATG | 7 cut(s) | 326, 383, 424, 647, 959, 1192, 1388 |
| BtsIMutI | CAGTG | 5 cut(s) | 540, 590, 872, 1141, 1280 |
| Cac8I | GCNNGC | 3 cut(s) | 11, 246, 1248 |
| CaiI | CAGNNNCTG | 1 cut(s) | 767 |
| CciI | TCATGA | 1 cut(s) | 334 |
| Cfr10I | RCCGGY | 1 cut(s) | 1036 |
| Cfr13I | GGNCC | 2 cut(s) | 473, 819 |
| Csp6I | GTAC | 4 cut(s) | 270, 445, 522, 875 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1240, 1275 |
| CviAII | CATG | 4 cut(s) | 335, 369, 1247, 1318 |
| CviQI | GTAC | 4 cut(s) | 270, 445, 522, 875 |
| DdeI | CTNAG | 5 cut(s) | 156, 480, 558, 864, 1374 |
| DpnI | GATC | 5 cut(s) | 46, 414, 423, 891, 1230 |
| DpnII | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| DriI | GACNNNNNGTC | 1 cut(s) | 998 |
| EaeI | YGGCCR | 1 cut(s) | 1078 |
| Eam1104I | CTCTTC | 4 cut(s) | 447, 533, 960, 1284 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 998 |
| EarI | CTCTTC | 4 cut(s) | 447, 533, 960, 1284 |
| EciI | GGCGGA | 1 cut(s) | 1012 |
| Eco147I | AGGCCT | 1 cut(s) | 1117 |
| Eco32I | GATATC | 1 cut(s) | 192 |
| Eco47I | GGWCC | 2 cut(s) | 473, 819 |
| Eco57I | CTGAAG | 4 cut(s) | 246, 383, 699, 1052 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 504 |
| EcoO109I | RGGNCCY | 2 cut(s) | 473, 819 |
| EcoRII | CCWGG | 4 cut(s) | 688, 760, 1025, 1075 |
| EcoRV | GATATC | 1 cut(s) | 192 |
| Esp3I | CGTCTC | 1 cut(s) | 157 |
| FaeI | CATG | 4 cut(s) | 338, 372, 1250, 1321 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 219, 251 |
| FaqI | GGGAC | 2 cut(s) | 125, 805 |
| FatI | CATG | 4 cut(s) | 334, 368, 1246, 1317 |
| Fnu4HI | GCNGC | 3 cut(s) | 91, 496, 511 |
| FokI | GGATG | 7 cut(s) | 313, 370, 411, 634, 946, 1199, 1375 |
| Fsp4HI | GCNGC | 3 cut(s) | 91, 496, 511 |
| FspBI | CTAG | 1 cut(s) | 492 |
| GluI | GCNGC | 3 cut(s) | 91, 496, 511 |
| GsaI | CCCAGC | 2 cut(s) | 290, 1396 |
| GsuI | CTGGAG | 4 cut(s) | 525, 558, 619, 672 |
| HaeIII | GGCC | 3 cut(s) | 248, 1080, 1117 |
| HapII | CCGG | 3 cut(s) | 553, 664, 1037 |
| Hin1II | CATG | 4 cut(s) | 338, 372, 1250, 1321 |
| HindIII | AAGCTT | 1 cut(s) | 261 |
| HinfI | GANTC | 8 cut(s) | 34, 344, 527, 541, 813, 926, 1010, 1197 |
| HpaII | CCGG | 3 cut(s) | 553, 664, 1037 |
| HphI | GGTGA | 4 cut(s) | 137, 926, 1164, 1249 |
| Hpy166II | GTNNAC | 3 cut(s) | 232, 853, 1111 |
| Hpy188I | TCNGA | 6 cut(s) | 481, 652, 745, 964, 1233, 1288 |
| Hpy8I | GTNNAC | 3 cut(s) | 232, 853, 1111 |
| HpyAV | CCTTC | 5 cut(s) | 245, 486, 510, 723, 1228 |
| HpyCH4III | ACNGT | 4 cut(s) | 203, 535, 769, 1284 |
| HpyCH4V | TGCA | 9 cut(s) | 42, 232, 244, 588, 754, 779, 841, 950, 1381 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 19, 132, 612 |
| HpyF3I | CTNAG | 5 cut(s) | 156, 480, 558, 864, 1374 |
| Hsp92II | CATG | 4 cut(s) | 338, 372, 1250, 1321 |
| KpnI | GGTACC | 1 cut(s) | 273 |
| Kzo9I | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| LmnI | GCTCC | 2 cut(s) | 378, 591 |
| Lsp1109I | GCAGC | 3 cut(s) | 77, 507, 522 |
| LweI | GCATC | 2 cut(s) | 741, 867 |
| MaeI | CTAG | 1 cut(s) | 492 |
| MaeIII | GTNAC | 3 cut(s) | 167, 1039, 1358 |
| MalI | GATC | 5 cut(s) | 46, 414, 423, 891, 1230 |
| MbiI | CCGCTC | 1 cut(s) | 135 |
| MboI | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| MflI | RGATCY | 1 cut(s) | 889 |
| MhlI | GDGCHC | 1 cut(s) | 234 |
| MlsI | TGGCCA | 1 cut(s) | 1080 |
| MluCI | AATT | 5 cut(s) | 294, 359, 628, 655, 1204 |
| MluNI | TGGCCA | 1 cut(s) | 1080 |
| MlyI | GAGTC | 1 cut(s) | 550 |
| MmeI | TCCRAC | 3 cut(s) | 390, 749, 1251 |
| Mox20I | TGGCCA | 1 cut(s) | 1080 |
| MroXI | GAANNNNTTC | 1 cut(s) | 466 |
| MscI | TGGCCA | 1 cut(s) | 1080 |
| MseI | TTAA | 3 cut(s) | 258, 317, 933 |
| MslI | CAYNNNNRTG | 4 cut(s) | 912, 1146, 1164, 1177 |
| Msp20I | TGGCCA | 1 cut(s) | 1080 |
| MspA1I | CMGCKG | 3 cut(s) | 224, 290, 513 |
| MspI | CCGG | 3 cut(s) | 553, 664, 1037 |
| MspR9I | CCNGG | 4 cut(s) | 690, 762, 1027, 1077 |
| Mva1269I | GAATGC | 1 cut(s) | 617 |
| MvaI | CCWGG | 4 cut(s) | 690, 762, 1027, 1077 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 19, 132, 612 |
| NdeII | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| NlaIII | CATG | 4 cut(s) | 338, 372, 1250, 1321 |
| NlaIV | GGNNCC | 3 cut(s) | 271, 374, 821 |
| NmuCI | GTSAC | 1 cut(s) | 1358 |
| NspI | RCATGY | 1 cut(s) | 1250 |
| OliI | CACNNNNGTG | 1 cut(s) | 1177 |
| PaeI | GCATGC | 1 cut(s) | 1250 |
| PagI | TCATGA | 1 cut(s) | 334 |
| PceI | AGGCCT | 1 cut(s) | 1117 |
| PctI | GAATGC | 1 cut(s) | 617 |
| PdmI | GAANNNNTTC | 1 cut(s) | 466 |
| PfeI | GAWTC | 7 cut(s) | 34, 344, 527, 813, 926, 1010, 1197 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1182 |
| PfoI | TCCNGGA | 1 cut(s) | 688 |
| PkrI | GCNGC | 3 cut(s) | 92, 497, 512 |
| PleI | GAGTC | 1 cut(s) | 549 |
| PpsI | GAGTC | 1 cut(s) | 549 |
| PpuMI | RGGWCCY | 2 cut(s) | 473, 819 |
| PshAI | GACNNNNGTC | 1 cut(s) | 182 |
| PsiI | TTATAA | 1 cut(s) | 660 |
| Psp5II | RGGWCCY | 2 cut(s) | 473, 819 |
| Psp6I | CCWGG | 4 cut(s) | 688, 760, 1025, 1075 |
| PspFI | CCCAGC | 2 cut(s) | 286, 1392 |
| PspGI | CCWGG | 4 cut(s) | 688, 760, 1025, 1075 |
| PspN4I | GGNNCC | 3 cut(s) | 271, 374, 821 |
| PspPI | GGNCC | 2 cut(s) | 473, 819 |
| PspPPI | RGGWCCY | 2 cut(s) | 473, 819 |
| PstI | CTGCAG | 1 cut(s) | 246 |
| PstNI | CAGNNNCTG | 1 cut(s) | 767 |
| PsuI | RGATCY | 1 cut(s) | 889 |
| PvuII | CAGCTG | 2 cut(s) | 224, 290 |
| RsaI | GTAC | 4 cut(s) | 271, 446, 523, 876 |
| RsaNI | GTAC | 4 cut(s) | 270, 445, 522, 875 |
| RseI | CAYNNNNRTG | 4 cut(s) | 912, 1146, 1164, 1177 |
| SaqAI | TTAA | 3 cut(s) | 258, 317, 933 |
| SatI | GCNGC | 3 cut(s) | 91, 496, 511 |
| Sau3AI | GATC | 5 cut(s) | 44, 412, 421, 889, 1228 |
| Sau96I | GGNCC | 2 cut(s) | 473, 819 |
| SchI | GAGTC | 1 cut(s) | 550 |
| ScrFI | CCNGG | 4 cut(s) | 690, 762, 1027, 1077 |
| SduI | GDGCHC | 1 cut(s) | 234 |
| SfaNI | GCATC | 2 cut(s) | 741, 867 |
| SfcI | CTRYAG | 2 cut(s) | 242, 531 |
| SinI | GGWCC | 2 cut(s) | 473, 819 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 912, 1146, 1164, 1177 |
| SmlI | CTYRAG | 1 cut(s) | 1044 |
| SmoI | CTYRAG | 1 cut(s) | 1044 |
| SphI | GCATGC | 1 cut(s) | 1250 |
| Sse9I | AATT | 5 cut(s) | 294, 359, 628, 655, 1204 |
| SseBI | AGGCCT | 1 cut(s) | 1117 |
| SsiI | CCGC | 4 cut(s) | 133, 278, 513, 1023 |
| SspI | AATATT | 1 cut(s) | 565 |
| SspMI | CTAG | 1 cut(s) | 492 |
| StuI | AGGCCT | 1 cut(s) | 1117 |
| StyD4I | CCNGG | 4 cut(s) | 688, 760, 1025, 1075 |
| TaaI | ACNGT | 4 cut(s) | 203, 535, 769, 1284 |
| TaqI | TCGA | 2 cut(s) | 71, 77 |
| TasI | AATT | 5 cut(s) | 294, 359, 628, 655, 1204 |
| TatI | WGTACW | 2 cut(s) | 444, 874 |
| TfiI | GAWTC | 7 cut(s) | 34, 344, 527, 813, 926, 1010, 1197 |
| Tru1I | TTAA | 3 cut(s) | 258, 317, 933 |
| Tru9I | TTAA | 3 cut(s) | 258, 317, 933 |
| TscAI | CASTG | 5 cut(s) | 540, 590, 872, 1148, 1287 |
| TseFI | GTSAC | 1 cut(s) | 1358 |
| TseI | GCWGC | 3 cut(s) | 90, 495, 510 |
| Tsp45I | GTSAC | 1 cut(s) | 1358 |
| TspDTI | ATGAA | 9 cut(s) | 455, 465, 636, 1164, 1170, 1288, 1368, 1377, 1401 |
| TspGWI | ACGGA | 4 cut(s) | 194, 1209, 1245, 1393 |
| TspRI | CASTG | 5 cut(s) | 540, 590, 872, 1148, 1287 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1182 |
| VneI | GTGCAC | 1 cut(s) | 230 |
| VpaK11BI | GGWCC | 2 cut(s) | 473, 819 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 504 |
| XapI | RAATTY | 4 cut(s) | 294, 359, 628, 1204 |
| XceI | RCATGY | 1 cut(s) | 1250 |
| XmnI | GAANNNNTTC | 1 cut(s) | 466 |
| XspI | CTAG | 1 cut(s) | 492 |