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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06660 AT2G30820 AT2G30820 |
| fragaria_vesca | FvH4_6g38770 FvH4_6g38770 FvH4_6g38770 |
| malus_domestica | MD00G1163200.v1.1 MD00G1163300.v1.1 MD09G1146900.v1.1 MD17G1133500.v1.1 |
| prunus_persica | Prupe.3G178400_v2.0.a1 Prupe.3G178400_v2.0.a1 |
| pyrus_communis | pycom09g06740 pycom17g12800 |
| rosa_chinensis | RchiOBHm_Chr2g0152321 |
| rosa_laevigata | RLG00000020628 |
| rosa_multiflora | Rmu_sc0004002.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00095800 |
| rosa_rugosa | Rorug02G0432300 Rorug02G0432400 |
| rosa_samantha | Rh2AG493900 Rh2BG506200 Rh2CG480200 Rh2DG517300 |
| rosa_wichuraiana | Rw2G040620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1287 |
| AccBSI | CCGCTC | 1 cut(s) | 129 |
| AccII | CGCG | 1 cut(s) | 160 |
| AccIII | TCCGGA | 1 cut(s) | 1037 |
| AciI | CCGC | 2 cut(s) | 127, 1103 |
| AclWI | GGATC | 1 cut(s) | 1341 |
| AcsI | RAATTY | 5 cut(s) | 299, 342, 404, 1077, 1309 |
| AcuI | CTGAAG | 6 cut(s) | 85, 231, 428, 600, 1184, 1413 |
| AfaI | GTAC | 3 cut(s) | 319, 553, 598 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 240, 257, 688, 1229, 1284, 1287 |
| AflII | CTTAAG | 1 cut(s) | 305 |
| AgsI | TTSAA | 7 cut(s) | 13, 341, 357, 409, 494, 710, 1314 |
| AjnI | CCWGG | 4 cut(s) | 787, 859, 1121, 1210 |
| AluBI | AGCT | 9 cut(s) | 77, 170, 209, 283, 353, 442, 564, 573, 779 |
| AluI | AGCT | 9 cut(s) | 77, 170, 209, 283, 353, 442, 564, 573, 779 |
| Alw21I | GWGCWC | 1 cut(s) | 285 |
| Alw26I | GTCTC | 6 cut(s) | 183, 323, 530, 912, 1029, 1167 |
| AlwI | GGATC | 1 cut(s) | 1341 |
| Ama87I | CYCGRG | 1 cut(s) | 163 |
| Aor13HI | TCCGGA | 1 cut(s) | 1037 |
| AoxI | GGCC | 3 cut(s) | 134, 294, 1220 |
| ApeKI | GCWGC | 1 cut(s) | 466 |
| ApoI | RAATTY | 5 cut(s) | 299, 342, 404, 1077, 1309 |
| AspLEI | GCGC | 1 cut(s) | 162 |
| AspS9I | GGNCC | 1 cut(s) | 918 |
| AsuHPI | GGTGA | 4 cut(s) | 131, 363, 648, 1022 |
| AvaI | CYCGRG | 1 cut(s) | 163 |
| AvaII | GGWCC | 1 cut(s) | 918 |
| AxyI | CCTNAGG | 1 cut(s) | 948 |
| BaeGI | GKGCMC | 1 cut(s) | 803 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 309, 342 |
| BanII | GRGCYC | 2 cut(s) | 285, 399 |
| Bbv12I | GWGCWC | 1 cut(s) | 285 |
| BbvI | GCAGC | 1 cut(s) | 478 |
| BccI | CCATC | 2 cut(s) | 384, 883 |
| BciT130I | CCWGG | 4 cut(s) | 789, 861, 1123, 1212 |
| BcoDI | GTCTC | 6 cut(s) | 183, 323, 530, 912, 1029, 1167 |
| BfaI | CTAG | 4 cut(s) | 252, 461, 593, 1017 |
| BfmI | CTRYAG | 2 cut(s) | 321, 757 |
| BfrI | CTTAAG | 1 cut(s) | 305 |
| BisI | GCNGC | 1 cut(s) | 467 |
| BlsI | GCNGC | 1 cut(s) | 468 |
| Bme1390I | CCNGG | 4 cut(s) | 789, 861, 1123, 1212 |
| Bme18I | GGWCC | 1 cut(s) | 918 |
| BmeT110I | CYCGRG | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 1 cut(s) | 918 |
| BmiI | GGNNCC | 1 cut(s) | 920 |
| BmrFI | CCNGG | 4 cut(s) | 789, 861, 1123, 1212 |
| BmrI | ACTGGG | 2 cut(s) | 329, 916 |
| BmsI | GCATC | 3 cut(s) | 737, 840, 963 |
| BmuI | ACTGGG | 2 cut(s) | 329, 916 |
| BoxI | GACNNNNGTC | 1 cut(s) | 117 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 941, 973 |
| BpmI | CTGGAG | 2 cut(s) | 213, 771 |
| BpuEI | CTTGAG | 2 cut(s) | 269, 1131 |
| BsaBI | GATNNNNATC | 1 cut(s) | 120 |
| BsaI | GGTCTC | 1 cut(s) | 323 |
| BsaJI | CCNNGG | 1 cut(s) | 1211 |
| BsaWI | WCCGGW | 1 cut(s) | 1037 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 159, 189, 631, 661 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 240, 257, 688, 1229, 1284, 1287 |
| Bse1I | ACTGG | 6 cut(s) | 335, 559, 682, 922, 1133, 1253 |
| Bse21I | CCTNAGG | 1 cut(s) | 948 |
| Bse8I | GATNNNNATC | 1 cut(s) | 120 |
| BseAI | TCCGGA | 1 cut(s) | 1037 |
| BseBI | CCWGG | 4 cut(s) | 789, 861, 1123, 1212 |
| BseDI | CCNNGG | 1 cut(s) | 1211 |
| BseGI | GGATG | 3 cut(s) | 428, 728, 1493 |
| BseJI | GATNNNNATC | 1 cut(s) | 120 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 240, 257, 688, 1229, 1284, 1287 |
| BseMII | CTCAG | 8 cut(s) | 164, 194, 583, 624, 681, 939, 1424, 1493 |
| BseNI | ACTGG | 6 cut(s) | 335, 559, 682, 922, 1133, 1253 |
| BseRI | GAGGAG | 1 cut(s) | 1382 |
| BseSI | GKGCMC | 1 cut(s) | 803 |
| BseXI | GCAGC | 1 cut(s) | 478 |
| BseYI | CCCAGC | 1 cut(s) | 1497 |
| BsgI | GTGCAG | 2 cut(s) | 55, 706 |
| Bsh1236I | CGCG | 1 cut(s) | 160 |
| Bsh1285I | CGRYCG | 1 cut(s) | 118 |
| BshFI | GGCC | 3 cut(s) | 136, 296, 1222 |
| BsiEI | CGRYCG | 1 cut(s) | 118 |
| BsiHKAI | GWGCWC | 1 cut(s) | 285 |
| BsiHKCI | CYCGRG | 1 cut(s) | 163 |
| BsiSI | CCGG | 2 cut(s) | 72, 1038 |
| BslFI | GGGAC | 5 cut(s) | 125, 274, 904, 1229, 1304 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 240, 257, 688, 1229, 1284, 1287 |
| BsmAI | GTCTC | 6 cut(s) | 183, 323, 530, 912, 1029, 1167 |
| BsmBI | CGTCTC | 1 cut(s) | 1167 |
| BsmFI | GGGAC | 5 cut(s) | 125, 274, 904, 1229, 1304 |
| BsmI | GAATGC | 1 cut(s) | 1437 |
| BsnI | GGCC | 3 cut(s) | 136, 296, 1222 |
| Bso31I | GGTCTC | 1 cut(s) | 323 |
| BsoBI | CYCGRG | 1 cut(s) | 163 |
| Bsp1286I | GDGCHC | 3 cut(s) | 285, 399, 803 |
| Bsp13I | TCCGGA | 1 cut(s) | 1037 |
| Bsp143I | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| BspACI | CCGC | 2 cut(s) | 127, 1103 |
| BspANI | GGCC | 3 cut(s) | 136, 296, 1222 |
| BspCNI | CTCAG | 8 cut(s) | 163, 193, 582, 625, 680, 940, 1423, 1492 |
| BspEI | TCCGGA | 1 cut(s) | 1037 |
| BspFNI | CGCG | 1 cut(s) | 160 |
| BspHI | TCATGA | 1 cut(s) | 379 |
| BspLI | GGNNCC | 1 cut(s) | 920 |
| BspPI | GGATC | 1 cut(s) | 1341 |
| BspTI | CTTAAG | 1 cut(s) | 305 |
| BspTNI | GGTCTC | 1 cut(s) | 323 |
| BsrBI | CCGCTC | 1 cut(s) | 129 |
| BsrI | ACTGG | 6 cut(s) | 335, 559, 682, 922, 1133, 1253 |
| BssECI | CCNNGG | 1 cut(s) | 1211 |
| BssMI | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| Bst2UI | CCWGG | 4 cut(s) | 789, 861, 1123, 1212 |
| Bst4CI | ACNGT | 4 cut(s) | 643, 758, 868, 1362 |
| Bst6I | CTCTTC | 3 cut(s) | 207, 489, 1056 |
| BstAFI | CTTAAG | 1 cut(s) | 305 |
| BstC8I | GCNNGC | 1 cut(s) | 1353 |
| BstDEI | CTNAG | 8 cut(s) | 150, 180, 569, 633, 667, 948, 1410, 1479 |
| BstF5I | GGATG | 3 cut(s) | 428, 728, 1493 |
| BstFNI | CGCG | 1 cut(s) | 160 |
| BstHHI | GCGC | 1 cut(s) | 162 |
| BstKTI | GATC | 5 cut(s) | 41, 65, 118, 241, 1336 |
| BstMAI | GTCTC | 6 cut(s) | 183, 323, 530, 912, 1029, 1167 |
| BstMBI | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| BstMCI | CGRYCG | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 570, 776 |
| BstNI | CCWGG | 4 cut(s) | 789, 861, 1123, 1212 |
| BstNSI | RCATGY | 1 cut(s) | 1355 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 117 |
| BstSCI | CCNGG | 4 cut(s) | 787, 859, 1121, 1210 |
| BstSFI | CTRYAG | 2 cut(s) | 321, 757 |
| BstSLI | GKGCMC | 1 cut(s) | 803 |
| BstUI | CGCG | 1 cut(s) | 160 |
| BstV1I | GCAGC | 1 cut(s) | 478 |
| Bsu36I | CCTNAGG | 1 cut(s) | 948 |
| BsuRI | GGCC | 3 cut(s) | 136, 296, 1222 |
| BtsCI | GGATG | 3 cut(s) | 428, 728, 1493 |
| BtsIMutI | CAGTG | 6 cut(s) | 639, 689, 830, 1140, 1246, 1515 |
| Cac8I | GCNNGC | 1 cut(s) | 1353 |
| CciI | TCATGA | 1 cut(s) | 379 |
| CfoI | GCGC | 1 cut(s) | 162 |
| Cfr13I | GGNCC | 1 cut(s) | 918 |
| CseI | GACGC | 1 cut(s) | 1184 |
| Csp6I | GTAC | 3 cut(s) | 318, 552, 597 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 1491 |
| CviAII | CATG | 4 cut(s) | 380, 414, 998, 1352 |
| CviQI | GTAC | 3 cut(s) | 318, 552, 597 |
| DdeI | CTNAG | 8 cut(s) | 150, 180, 569, 633, 667, 948, 1410, 1479 |
| DpnI | GATC | 5 cut(s) | 40, 64, 117, 240, 1335 |
| DpnII | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| Eam1104I | CTCTTC | 3 cut(s) | 207, 489, 1056 |
| EarI | CTCTTC | 3 cut(s) | 207, 489, 1056 |
| EciI | GGCGGA | 1 cut(s) | 1118 |
| Ecl136II | GAGCTC | 1 cut(s) | 283 |
| Eco147I | AGGCCT | 1 cut(s) | 1222 |
| Eco24I | GRGCYC | 2 cut(s) | 285, 399 |
| Eco31I | GGTCTC | 1 cut(s) | 323 |
| Eco47I | GGWCC | 1 cut(s) | 918 |
| Eco53kI | GAGCTC | 1 cut(s) | 283 |
| Eco57I | CTGAAG | 6 cut(s) | 85, 231, 428, 600, 1184, 1413 |
| Eco81I | CCTNAGG | 1 cut(s) | 948 |
| Eco88I | CYCGRG | 1 cut(s) | 163 |
| EcoICRI | GAGCTC | 1 cut(s) | 283 |
| EcoO109I | RGGNCCY | 1 cut(s) | 918 |
| EcoRII | CCWGG | 4 cut(s) | 787, 859, 1121, 1210 |
| EcoT38I | GRGCYC | 2 cut(s) | 285, 399 |
| Esp3I | CGTCTC | 1 cut(s) | 1167 |
| FaeI | CATG | 4 cut(s) | 383, 417, 1001, 1355 |
| FaqI | GGGAC | 5 cut(s) | 125, 274, 904, 1229, 1304 |
| FatI | CATG | 4 cut(s) | 379, 413, 997, 1351 |
| Fnu4HI | GCNGC | 1 cut(s) | 467 |
| FokI | GGATG | 3 cut(s) | 415, 715, 1480 |
| FriOI | GRGCYC | 2 cut(s) | 285, 399 |
| Fsp4HI | GCNGC | 1 cut(s) | 467 |
| FspBI | CTAG | 4 cut(s) | 252, 461, 593, 1017 |
| GlaI | GCGC | 1 cut(s) | 161 |
| GluI | GCNGC | 1 cut(s) | 467 |
| GsaI | CCCAGC | 1 cut(s) | 1501 |
| GsuI | CTGGAG | 2 cut(s) | 213, 771 |
| HaeIII | GGCC | 3 cut(s) | 136, 296, 1222 |
| HapII | CCGG | 2 cut(s) | 72, 1038 |
| HgaI | GACGC | 1 cut(s) | 1184 |
| HhaI | GCGC | 1 cut(s) | 162 |
| Hin1II | CATG | 4 cut(s) | 383, 417, 1001, 1355 |
| Hin6I | GCGC | 1 cut(s) | 160 |
| HinP1I | GCGC | 1 cut(s) | 160 |
| HindIII | AAGCTT | 2 cut(s) | 351, 440 |
| HpaII | CCGG | 2 cut(s) | 72, 1038 |
| HphI | GGTGA | 4 cut(s) | 131, 363, 648, 1022 |
| Hpy166II | GTNNAC | 2 cut(s) | 590, 871 |
| Hpy8I | GTNNAC | 2 cut(s) | 590, 871 |
| HpyAV | CCTTC | 3 cut(s) | 575, 1291, 1375 |
| HpyCH4III | ACNGT | 4 cut(s) | 643, 758, 868, 1362 |
| HpyCH4V | TGCA | 7 cut(s) | 36, 664, 687, 770, 853, 1046, 1486 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 570, 776 |
| HpyF3I | CTNAG | 8 cut(s) | 150, 180, 569, 633, 667, 948, 1410, 1479 |
| Hsp92II | CATG | 4 cut(s) | 383, 417, 1001, 1355 |
| HspAI | GCGC | 1 cut(s) | 160 |
| Kpn2I | TCCGGA | 1 cut(s) | 1037 |
| Kzo9I | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| LmnI | GCTCC | 3 cut(s) | 74, 167, 280 |
| Lsp1109I | GCAGC | 1 cut(s) | 478 |
| LweI | GCATC | 3 cut(s) | 737, 840, 963 |
| MaeI | CTAG | 4 cut(s) | 252, 461, 593, 1017 |
| MaeIII | GTNAC | 3 cut(s) | 643, 752, 1135 |
| MalI | GATC | 5 cut(s) | 40, 64, 117, 240, 1335 |
| MbiI | CCGCTC | 1 cut(s) | 129 |
| MboI | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| MhlI | GDGCHC | 3 cut(s) | 285, 399, 803 |
| MluCI | AATT | 9 cut(s) | 20, 270, 299, 342, 363, 404, 1077, 1227, 1309 |
| MlyI | GAGTC | 4 cut(s) | 114, 256, 829, 1031 |
| MmeI | TCCRAC | 3 cut(s) | 674, 848, 1356 |
| MroI | TCCGGA | 1 cut(s) | 1037 |
| MseI | TTAA | 4 cut(s) | 306, 362, 435, 483 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1251 |
| MspCI | CTTAAG | 1 cut(s) | 305 |
| MspI | CCGG | 2 cut(s) | 72, 1038 |
| MspR9I | CCNGG | 4 cut(s) | 789, 861, 1123, 1212 |
| Mva1269I | GAATGC | 1 cut(s) | 1437 |
| MvaI | CCWGG | 4 cut(s) | 789, 861, 1123, 1212 |
| MvnI | CGCG | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 570, 776 |
| NdeII | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| NlaIII | CATG | 4 cut(s) | 383, 417, 1001, 1355 |
| NlaIV | GGNNCC | 1 cut(s) | 920 |
| NmeAIII | GCCGAG | 1 cut(s) | 112 |
| NmuCI | GTSAC | 1 cut(s) | 1135 |
| NspI | RCATGY | 1 cut(s) | 1355 |
| PaeI | GCATGC | 1 cut(s) | 1355 |
| PagI | TCATGA | 1 cut(s) | 379 |
| PceI | AGGCCT | 1 cut(s) | 1222 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1452 |
| PctI | GAATGC | 1 cut(s) | 1437 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1287 |
| PfoI | TCCNGGA | 1 cut(s) | 787 |
| PkrI | GCNGC | 1 cut(s) | 468 |
| Ple19I | CGATCG | 1 cut(s) | 118 |
| PleI | GAGTC | 4 cut(s) | 113, 256, 829, 1030 |
| PpsI | GAGTC | 4 cut(s) | 113, 256, 829, 1030 |
| PpuMI | RGGWCCY | 1 cut(s) | 918 |
| PshAI | GACNNNNGTC | 1 cut(s) | 117 |
| Psp124BI | GAGCTC | 1 cut(s) | 285 |
| Psp5II | RGGWCCY | 1 cut(s) | 918 |
| Psp6I | CCWGG | 4 cut(s) | 787, 859, 1121, 1210 |
| PspFI | CCCAGC | 1 cut(s) | 1497 |
| PspGI | CCWGG | 4 cut(s) | 787, 859, 1121, 1210 |
| PspN4I | GGNNCC | 1 cut(s) | 920 |
| PspPI | GGNCC | 1 cut(s) | 918 |
| PspPPI | RGGWCCY | 1 cut(s) | 918 |
| PvuI | CGATCG | 1 cut(s) | 118 |
| RsaI | GTAC | 3 cut(s) | 319, 553, 598 |
| RsaNI | GTAC | 3 cut(s) | 318, 552, 597 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1251 |
| SacI | GAGCTC | 1 cut(s) | 285 |
| SaqAI | TTAA | 4 cut(s) | 306, 362, 435, 483 |
| SatI | GCNGC | 1 cut(s) | 467 |
| Sau3AI | GATC | 5 cut(s) | 38, 62, 115, 238, 1333 |
| Sau96I | GGNCC | 1 cut(s) | 918 |
| SchI | GAGTC | 4 cut(s) | 114, 256, 829, 1031 |
| ScrFI | CCNGG | 4 cut(s) | 789, 861, 1123, 1212 |
| SduI | GDGCHC | 3 cut(s) | 285, 399, 803 |
| SfaNI | GCATC | 3 cut(s) | 737, 840, 963 |
| SfcI | CTRYAG | 2 cut(s) | 321, 757 |
| SinI | GGWCC | 1 cut(s) | 918 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1251 |
| SmlI | CTYRAG | 3 cut(s) | 284, 305, 1146 |
| SmoI | CTYRAG | 3 cut(s) | 284, 305, 1146 |
| SphI | GCATGC | 1 cut(s) | 1355 |
| Sse9I | AATT | 9 cut(s) | 20, 270, 299, 342, 363, 404, 1077, 1227, 1309 |
| SseBI | AGGCCT | 1 cut(s) | 1222 |
| SsiI | CCGC | 2 cut(s) | 127, 1103 |
| SspMI | CTAG | 4 cut(s) | 252, 461, 593, 1017 |
| SstI | GAGCTC | 1 cut(s) | 285 |
| StuI | AGGCCT | 1 cut(s) | 1222 |
| StyD4I | CCNGG | 4 cut(s) | 787, 859, 1121, 1210 |
| TaaI | ACNGT | 4 cut(s) | 643, 758, 868, 1362 |
| TaqI | TCGA | 2 cut(s) | 910, 1446 |
| TasI | AATT | 9 cut(s) | 20, 270, 299, 342, 363, 404, 1077, 1227, 1309 |
| Tru1I | TTAA | 4 cut(s) | 306, 362, 435, 483 |
| Tru9I | TTAA | 4 cut(s) | 306, 362, 435, 483 |
| TscAI | CASTG | 6 cut(s) | 646, 689, 837, 1140, 1253, 1515 |
| TseFI | GTSAC | 1 cut(s) | 1135 |
| TseI | GCWGC | 1 cut(s) | 466 |
| Tsp45I | GTSAC | 1 cut(s) | 1135 |
| TspDTI | ATGAA | 8 cut(s) | 594, 608, 735, 1071, 1269, 1393, 1482, 1506 |
| TspRI | CASTG | 6 cut(s) | 646, 689, 837, 1140, 1253, 1515 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1287 |
| Vha464I | CTTAAG | 1 cut(s) | 305 |
| VpaK11BI | GGWCC | 1 cut(s) | 918 |
| XapI | RAATTY | 5 cut(s) | 299, 342, 404, 1077, 1309 |
| XceI | RCATGY | 1 cut(s) | 1355 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 551 |
| XspI | CTAG | 4 cut(s) | 252, 461, 593, 1017 |