Plant protein of unknown function (DUF863)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g47740 FvH4_6g47740 FvH4_6g47740 FvH4_6g47740 |
| malus_domestica | MD09G1059300.v1.1 MD17G1054900.v1.1 |
| prunus_persica | Prupe.3G261200_v2.0.a1 |
| pyrus_communis | pycom08g18570 pycom111g05020 pycom111g05040 pycom111g05060 pycom17g05270 pycom17g05290 |
| rosa_chinensis | RchiOBHm_Chr2g0166861 RchiOBHm_Chr4g0401141 RchiOBHm_Chr5g0037041 RchiOBHm_Chr7g0237831 |
| rosa_laevigata | RLG00000021662 RLG00000021675 |
| rosa_multiflora | Rmu_sc0005344.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00084060 Rroxscaffold_2G00084090 Rroxscaffold_2G00084470 Rroxscaffold_4G00327630 |
| rosa_rugosa | Rorug02G0525900 Rorug02G0526000 |
| rosa_samantha | Rh2AG592900 Rh2BG604100 Rh2BG604300 Rh2CG575000 Rh2CG575200 Rh2DG615600 Rh2DG615800 Rh3DG312900 Rh4DG186200 Rh5DG059300 Rh5DG383900 |
| rosa_wichuraiana | Rw2G049350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1281 |
| Acc36I | ACCTGC | 1 cut(s) | 1741 |
| Acc65I | GGTACC | 2 cut(s) | 1695, 1753 |
| AccB1I | GGYRCC | 2 cut(s) | 1695, 1753 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 482, 2027 |
| AciI | CCGC | 4 cut(s) | 350, 1095, 2397, 2575 |
| AclWI | GGATC | 2 cut(s) | 1628, 2319 |
| AcoI | YGGCCR | 2 cut(s) | 97, 2210 |
| AcsI | RAATTY | 6 cut(s) | 333, 1060, 1487, 1806, 1818, 1938 |
| AcuI | CTGAAG | 7 cut(s) | 500, 755, 1254, 1536, 1560, 1746, 2157 |
| AcyI | GRCGYC | 1 cut(s) | 2566 |
| AfaI | GTAC | 6 cut(s) | 489, 785, 1697, 1755, 2120, 2449 |
| AgeI | ACCGGT | 1 cut(s) | 728 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 760, 2565 |
| AhlI | ACTAGT | 2 cut(s) | 479, 2444 |
| AjnI | CCWGG | 3 cut(s) | 58, 534, 1241 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 815, 847, 1519, 1551, 2010, 2042 |
| AleI | CACNNNNGTG | 2 cut(s) | 660, 1648 |
| Alw21I | GWGCWC | 2 cut(s) | 698, 1447 |
| Alw26I | GTCTC | 3 cut(s) | 768, 911, 1856 |
| AlwI | GGATC | 2 cut(s) | 1628, 2319 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2540 |
| AoxI | GGCC | 6 cut(s) | 97, 173, 797, 949, 1840, 2210 |
| ApoI | RAATTY | 6 cut(s) | 333, 1060, 1487, 1806, 1818, 1938 |
| AseI | ATTAAT | 1 cut(s) | 2055 |
| AsiGI | ACCGGT | 1 cut(s) | 728 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 744, 1821, 2252 |
| Asp718I | GGTACC | 2 cut(s) | 1695, 1753 |
| AspS9I | GGNCC | 4 cut(s) | 111, 596, 1565, 1841 |
| AsuC2I | CCSGG | 1 cut(s) | 2274 |
| AsuHPI | GGTGA | 5 cut(s) | 674, 1101, 1631, 1799, 2314 |
| AvaII | GGWCC | 3 cut(s) | 111, 596, 1565 |
| BalI | TGGCCA | 1 cut(s) | 99 |
| BanI | GGYRCC | 2 cut(s) | 1695, 1753 |
| BanII | GRGCYC | 1 cut(s) | 698 |
| BbsI | GAAGAC | 2 cut(s) | 1534, 1962 |
| Bbv12I | GWGCWC | 2 cut(s) | 698, 1447 |
| BccI | CCATC | 9 cut(s) | 102, 179, 421, 560, 607, 988, 1832, 1883, 2473 |
| BceAI | ACGGC | 1 cut(s) | 2225 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 33 |
| BciT130I | CCWGG | 3 cut(s) | 60, 536, 1243 |
| BclI | TGATCA | 2 cut(s) | 916, 1930 |
| BcnI | CCSGG | 1 cut(s) | 2274 |
| BcoDI | GTCTC | 3 cut(s) | 768, 911, 1856 |
| BcuI | ACTAGT | 2 cut(s) | 479, 2444 |
| BfaI | CTAG | 4 cut(s) | 87, 480, 996, 2445 |
| BfmI | CTRYAG | 1 cut(s) | 2507 |
| BfuAI | ACCTGC | 1 cut(s) | 1741 |
| BmcAI | AGTACT | 1 cut(s) | 2449 |
| Bme1390I | CCNGG | 4 cut(s) | 60, 536, 1243, 2274 |
| Bme18I | GGWCC | 3 cut(s) | 111, 596, 1565 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 760, 2565 |
| BmgT120I | GGNCC | 4 cut(s) | 111, 596, 1565, 1841 |
| BmiI | GGNNCC | 7 cut(s) | 113, 576, 597, 741, 1508, 1697, 1755 |
| BmrFI | CCNGG | 4 cut(s) | 60, 536, 1243, 2274 |
| BmrI | ACTGGG | 1 cut(s) | 1511 |
| BmsI | GCATC | 1 cut(s) | 362 |
| BmuI | ACTGGG | 1 cut(s) | 1511 |
| BpiI | GAAGAC | 2 cut(s) | 1534, 1962 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1374, 1406 |
| BpmI | CTGGAG | 2 cut(s) | 864, 2562 |
| BpuEI | CTTGAG | 2 cut(s) | 1162, 2537 |
| BpuMI | CCSGG | 1 cut(s) | 2274 |
| BsaHI | GRCGYC | 1 cut(s) | 2566 |
| BsaI | GGTCTC | 1 cut(s) | 911 |
| BsaJI | CCNNGG | 4 cut(s) | 100, 387, 1242, 2272 |
| BsaWI | WCCGGW | 1 cut(s) | 728 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 601, 631, 2401, 2431 |
| Bse118I | RCCGGY | 1 cut(s) | 728 |
| Bse1I | ACTGG | 5 cut(s) | 176, 1157, 1506, 2100, 2545 |
| Bse3DI | GCAATG | 2 cut(s) | 97, 1354 |
| BseBI | CCWGG | 3 cut(s) | 60, 536, 1243 |
| BseDI | CCNNGG | 4 cut(s) | 100, 387, 1242, 2272 |
| BseGI | GGATG | 2 cut(s) | 113, 2269 |
| BseMI | GCAATG | 2 cut(s) | 97, 1354 |
| BseMII | CTCAG | 7 cut(s) | 1085, 1095, 1460, 1788, 1851, 2298, 2507 |
| BseNI | ACTGG | 5 cut(s) | 176, 1157, 1506, 2100, 2545 |
| BseRI | GAGGAG | 3 cut(s) | 861, 2080, 2245 |
| BseYI | CCCAGC | 2 cut(s) | 471, 491 |
| BsgI | GTGCAG | 3 cut(s) | 1769, 2445, 2474 |
| BshFI | GGCC | 6 cut(s) | 99, 175, 799, 951, 1842, 2212 |
| BshNI | GGYRCC | 2 cut(s) | 1695, 1753 |
| BshTI | ACCGGT | 1 cut(s) | 728 |
| BsiHKAI | GWGCWC | 2 cut(s) | 698, 1447 |
| BsiSI | CCGG | 2 cut(s) | 729, 2274 |
| BslFI | GGGAC | 2 cut(s) | 97, 609 |
| BsmAI | GTCTC | 3 cut(s) | 768, 911, 1856 |
| BsmFI | GGGAC | 2 cut(s) | 97, 609 |
| BsnI | GGCC | 6 cut(s) | 99, 175, 799, 951, 1842, 2212 |
| Bso31I | GGTCTC | 1 cut(s) | 911 |
| Bsp1286I | GDGCHC | 2 cut(s) | 698, 1447 |
| Bsp1407I | TGTACA | 1 cut(s) | 783 |
| Bsp143I | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| Bsp19I | CCATGG | 1 cut(s) | 100 |
| BspACI | CCGC | 4 cut(s) | 350, 1095, 2397, 2575 |
| BspANI | GGCC | 6 cut(s) | 99, 175, 799, 951, 1842, 2212 |
| BspCNI | CTCAG | 7 cut(s) | 1084, 1096, 1459, 1789, 1852, 2299, 2506 |
| BspHI | TCATGA | 4 cut(s) | 193, 1630, 1834, 1894 |
| BspLI | GGNNCC | 7 cut(s) | 113, 576, 597, 741, 1508, 1697, 1755 |
| BspMAI | CTGCAG | 1 cut(s) | 2511 |
| BspMI | ACCTGC | 1 cut(s) | 1741 |
| BspPI | GGATC | 2 cut(s) | 1628, 2319 |
| BspT107I | GGYRCC | 2 cut(s) | 1695, 1753 |
| BspTNI | GGTCTC | 1 cut(s) | 911 |
| BsrDI | GCAATG | 2 cut(s) | 97, 1354 |
| BsrFI | RCCGGY | 1 cut(s) | 728 |
| BsrGI | TGTACA | 1 cut(s) | 783 |
| BsrI | ACTGG | 5 cut(s) | 176, 1157, 1506, 2100, 2545 |
| BssAI | RCCGGY | 1 cut(s) | 728 |
| BssECI | CCNNGG | 4 cut(s) | 100, 387, 1242, 2272 |
| BssMI | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| BssNI | GRCGYC | 1 cut(s) | 2566 |
| BssT1I | CCWWGG | 2 cut(s) | 100, 387 |
| Bst2UI | CCWGG | 3 cut(s) | 60, 536, 1243 |
| Bst4CI | ACNGT | 6 cut(s) | 42, 683, 1175, 1361, 1627, 2452 |
| Bst6I | CTCTTC | 1 cut(s) | 2398 |
| BstACI | GRCGYC | 1 cut(s) | 2566 |
| BstAUI | TGTACA | 1 cut(s) | 783 |
| BstC8I | GCNNGC | 4 cut(s) | 1014, 1890, 2357, 2457 |
| BstDEI | CTNAG | 9 cut(s) | 1071, 1080, 1104, 1446, 1797, 1860, 2307, 2465, 2493 |
| BstDSI | CCRYGG | 1 cut(s) | 100 |
| BstEII | GGTNACC | 1 cut(s) | 401 |
| BstF5I | GGATG | 2 cut(s) | 113, 2269 |
| BstKTI | GATC | 6 cut(s) | 312, 919, 1636, 1933, 2155, 2314 |
| BstMAI | GTCTC | 3 cut(s) | 768, 911, 1856 |
| BstMBI | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 96, 350, 868, 1001, 2003, 2572 |
| BstNI | CCWGG | 3 cut(s) | 60, 536, 1243 |
| BstNSI | RCATGY | 2 cut(s) | 1008, 1903 |
| BstPI | GGTNACC | 1 cut(s) | 401 |
| BstSCI | CCNGG | 4 cut(s) | 58, 534, 1241, 2272 |
| BstSFI | CTRYAG | 1 cut(s) | 2507 |
| BstV2I | GAAGAC | 2 cut(s) | 1534, 1962 |
| BstX2I | RGATCY | 1 cut(s) | 2311 |
| BstYI | RGATCY | 1 cut(s) | 2311 |
| BsuRI | GGCC | 6 cut(s) | 99, 175, 799, 951, 1842, 2212 |
| BtgI | CCRYGG | 1 cut(s) | 100 |
| BtgZI | GCGATG | 1 cut(s) | 1869 |
| BtsCI | GGATG | 2 cut(s) | 113, 2269 |
| BtsI | GCAGTG | 1 cut(s) | 2541 |
| BtsIMutI | CAGTG | 5 cut(s) | 568, 2093, 2162, 2501, 2541 |
| BveI | ACCTGC | 1 cut(s) | 1741 |
| Cac8I | GCNNGC | 4 cut(s) | 1014, 1890, 2357, 2457 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2540 |
| CciI | TCATGA | 4 cut(s) | 193, 1630, 1834, 1894 |
| Cfr10I | RCCGGY | 1 cut(s) | 728 |
| Cfr13I | GGNCC | 4 cut(s) | 111, 596, 1565, 1841 |
| CseI | GACGC | 1 cut(s) | 2555 |
| Csp6I | GTAC | 6 cut(s) | 488, 784, 1696, 1754, 2119, 2448 |
| CspAI | ACCGGT | 1 cut(s) | 728 |
| CviQI | GTAC | 6 cut(s) | 488, 784, 1696, 1754, 2119, 2448 |
| DdeI | CTNAG | 9 cut(s) | 1071, 1080, 1104, 1446, 1797, 1860, 2307, 2465, 2493 |
| DpnI | GATC | 6 cut(s) | 311, 918, 1635, 1932, 2154, 2313 |
| DpnII | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| DraI | TTTAAA | 1 cut(s) | 1059 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1281 |
| DriI | GACNNNNNGTC | 2 cut(s) | 760, 2565 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1281 |
| EaeI | YGGCCR | 2 cut(s) | 97, 2210 |
| Eam1104I | CTCTTC | 1 cut(s) | 2398 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 760, 2565 |
| EarI | CTCTTC | 1 cut(s) | 2398 |
| Ecl136II | GAGCTC | 1 cut(s) | 696 |
| Eco130I | CCWWGG | 2 cut(s) | 100, 387 |
| Eco24I | GRGCYC | 1 cut(s) | 698 |
| Eco31I | GGTCTC | 1 cut(s) | 911 |
| Eco32I | GATATC | 1 cut(s) | 2585 |
| Eco47I | GGWCC | 3 cut(s) | 111, 596, 1565 |
| Eco53kI | GAGCTC | 1 cut(s) | 696 |
| Eco57I | CTGAAG | 7 cut(s) | 500, 755, 1254, 1536, 1560, 1746, 2157 |
| Eco91I | GGTNACC | 1 cut(s) | 401 |
| EcoICRI | GAGCTC | 1 cut(s) | 696 |
| EcoO65I | GGTNACC | 1 cut(s) | 401 |
| EcoRII | CCWGG | 3 cut(s) | 58, 534, 1241 |
| EcoRV | GATATC | 1 cut(s) | 2585 |
| EcoT14I | CCWWGG | 2 cut(s) | 100, 387 |
| EcoT22I | ATGCAT | 1 cut(s) | 864 |
| EcoT38I | GRGCYC | 1 cut(s) | 698 |
| ErhI | CCWWGG | 2 cut(s) | 100, 387 |
| FaqI | GGGAC | 2 cut(s) | 97, 609 |
| FauI | CCCGC | 1 cut(s) | 2390 |
| FbaI | TGATCA | 2 cut(s) | 916, 1930 |
| FokI | GGATG | 2 cut(s) | 120, 2276 |
| FriOI | GRGCYC | 1 cut(s) | 698 |
| FspBI | CTAG | 4 cut(s) | 87, 480, 996, 2445 |
| GsaI | CCCAGC | 2 cut(s) | 475, 495 |
| GsuI | CTGGAG | 2 cut(s) | 864, 2562 |
| HaeIII | GGCC | 6 cut(s) | 99, 175, 799, 951, 1842, 2212 |
| HapII | CCGG | 2 cut(s) | 729, 2274 |
| HgaI | GACGC | 1 cut(s) | 2555 |
| Hin1I | GRCGYC | 1 cut(s) | 2566 |
| HincII | GTYRAC | 4 cut(s) | 423, 897, 1585, 1780 |
| HindII | GTYRAC | 4 cut(s) | 423, 897, 1585, 1780 |
| HindIII | AAGCTT | 3 cut(s) | 512, 1683, 1791 |
| HinfI | GANTC | 7 cut(s) | 79, 239, 504, 1106, 1208, 1864, 2099 |
| HpaI | GTTAAC | 1 cut(s) | 897 |
| HpaII | CCGG | 2 cut(s) | 729, 2274 |
| HphI | GGTGA | 5 cut(s) | 674, 1101, 1631, 1799, 2314 |
| Hpy188I | TCNGA | 8 cut(s) | 519, 735, 750, 1048, 1087, 1105, 1798, 2176 |
| HpyAV | CCTTC | 8 cut(s) | 575, 730, 832, 962, 1380, 1994, 2242, 2321 |
| HpyCH4III | ACNGT | 6 cut(s) | 42, 683, 1175, 1361, 1627, 2452 |
| HpyCH4IV | ACGT | 1 cut(s) | 2166 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 96, 350, 868, 1001, 2003, 2572 |
| HpyF3I | CTNAG | 9 cut(s) | 1071, 1080, 1104, 1446, 1797, 1860, 2307, 2465, 2493 |
| HpySE526I | ACGT | 1 cut(s) | 2166 |
| Hsp92I | GRCGYC | 1 cut(s) | 2566 |
| KpnI | GGTACC | 2 cut(s) | 1699, 1757 |
| Ksp22I | TGATCA | 2 cut(s) | 916, 1930 |
| KspAI | GTTAAC | 1 cut(s) | 897 |
| Kzo9I | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| LmnI | GCTCC | 2 cut(s) | 2060, 2482 |
| LweI | GCATC | 1 cut(s) | 362 |
| MaeI | CTAG | 4 cut(s) | 87, 480, 996, 2445 |
| MaeII | ACGT | 1 cut(s) | 2166 |
| MaeIII | GTNAC | 7 cut(s) | 401, 1107, 1237, 2167, 2224, 2302, 2536 |
| MalI | GATC | 6 cut(s) | 311, 918, 1635, 1932, 2154, 2313 |
| MboI | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| MfeI | CAATTG | 2 cut(s) | 830, 1971 |
| MflI | RGATCY | 1 cut(s) | 2311 |
| MhlI | GDGCHC | 2 cut(s) | 698, 1447 |
| MlsI | TGGCCA | 1 cut(s) | 99 |
| MluNI | TGGCCA | 1 cut(s) | 99 |
| MlyI | GAGTC | 5 cut(s) | 73, 513, 1115, 1858, 2093 |
| Mox20I | TGGCCA | 1 cut(s) | 99 |
| Mph1103I | ATGCAT | 1 cut(s) | 864 |
| MroXI | GAANNNNTTC | 3 cut(s) | 744, 1821, 2252 |
| MscI | TGGCCA | 1 cut(s) | 99 |
| MslI | CAYNNNNRTG | 3 cut(s) | 660, 1314, 1648 |
| Msp20I | TGGCCA | 1 cut(s) | 99 |
| MspA1I | CMGCKG | 5 cut(s) | 350, 548, 1859, 2355, 2575 |
| MspI | CCGG | 2 cut(s) | 729, 2274 |
| MspR9I | CCNGG | 4 cut(s) | 60, 536, 1243, 2274 |
| MunI | CAATTG | 2 cut(s) | 830, 1971 |
| MvaI | CCWGG | 3 cut(s) | 60, 536, 1243 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 96, 350, 868, 1001, 2003, 2572 |
| NciI | CCSGG | 1 cut(s) | 2274 |
| NcoI | CCATGG | 1 cut(s) | 100 |
| NdeII | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| NlaIV | GGNNCC | 7 cut(s) | 113, 576, 597, 741, 1508, 1697, 1755 |
| NmuCI | GTSAC | 5 cut(s) | 1107, 2167, 2224, 2302, 2536 |
| NsiI | ATGCAT | 1 cut(s) | 864 |
| NspI | RCATGY | 2 cut(s) | 1008, 1903 |
| OliI | CACNNNNGTG | 2 cut(s) | 660, 1648 |
| PagI | TCATGA | 4 cut(s) | 193, 1630, 1834, 1894 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1457 |
| PdmI | GAANNNNTTC | 3 cut(s) | 744, 1821, 2252 |
| PfeI | GAWTC | 2 cut(s) | 239, 1208 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 482, 2027 |
| PinAI | ACCGGT | 1 cut(s) | 728 |
| PleI | GAGTC | 5 cut(s) | 73, 512, 1114, 1858, 2093 |
| PpsI | GAGTC | 5 cut(s) | 73, 512, 1114, 1858, 2093 |
| PshBI | ATTAAT | 1 cut(s) | 2055 |
| Psp124BI | GAGCTC | 1 cut(s) | 698 |
| Psp6I | CCWGG | 3 cut(s) | 58, 534, 1241 |
| PspEI | GGTNACC | 1 cut(s) | 401 |
| PspFI | CCCAGC | 2 cut(s) | 471, 491 |
| PspGI | CCWGG | 3 cut(s) | 58, 534, 1241 |
| PspN4I | GGNNCC | 7 cut(s) | 113, 576, 597, 741, 1508, 1697, 1755 |
| PspPI | GGNCC | 4 cut(s) | 111, 596, 1565, 1841 |
| PstI | CTGCAG | 1 cut(s) | 2511 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2540 |
| PsuI | RGATCY | 1 cut(s) | 2311 |
| PvuII | CAGCTG | 3 cut(s) | 548, 1859, 2355 |
| RsaI | GTAC | 6 cut(s) | 489, 785, 1697, 1755, 2120, 2449 |
| RsaNI | GTAC | 6 cut(s) | 488, 784, 1696, 1754, 2119, 2448 |
| RseI | CAYNNNNRTG | 3 cut(s) | 660, 1314, 1648 |
| SacI | GAGCTC | 1 cut(s) | 698 |
| Sau3AI | GATC | 6 cut(s) | 309, 916, 1633, 1930, 2152, 2311 |
| Sau96I | GGNCC | 4 cut(s) | 111, 596, 1565, 1841 |
| ScaI | AGTACT | 1 cut(s) | 2449 |
| SchI | GAGTC | 5 cut(s) | 73, 513, 1115, 1858, 2093 |
| ScrFI | CCNGG | 4 cut(s) | 60, 536, 1243, 2274 |
| SduI | GDGCHC | 2 cut(s) | 698, 1447 |
| SfaNI | GCATC | 1 cut(s) | 362 |
| SfcI | CTRYAG | 1 cut(s) | 2507 |
| SinI | GGWCC | 3 cut(s) | 111, 596, 1565 |
| SmiI | ATTTAAAT | 1 cut(s) | 1059 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 660, 1314, 1648 |
| SmlI | CTYRAG | 2 cut(s) | 1141, 2516 |
| SmoI | CTYRAG | 2 cut(s) | 1141, 2516 |
| SpeI | ACTAGT | 2 cut(s) | 479, 2444 |
| SsiI | CCGC | 4 cut(s) | 350, 1095, 2397, 2575 |
| SspMI | CTAG | 4 cut(s) | 87, 480, 996, 2445 |
| SstI | GAGCTC | 1 cut(s) | 698 |
| StyD4I | CCNGG | 4 cut(s) | 58, 534, 1241, 2272 |
| StyI | CCWWGG | 2 cut(s) | 100, 387 |
| SwaI | ATTTAAAT | 1 cut(s) | 1059 |
| TaaI | ACNGT | 6 cut(s) | 42, 683, 1175, 1361, 1627, 2452 |
| TaiI | ACGT | 1 cut(s) | 2169 |
| TaqI | TCGA | 5 cut(s) | 9, 167, 183, 1460, 1738 |
| TatI | WGTACW | 3 cut(s) | 783, 2118, 2447 |
| TauI | GCSGC | 3 cut(s) | 353, 1097, 2578 |
| TfiI | GAWTC | 2 cut(s) | 239, 1208 |
| TscAI | CASTG | 5 cut(s) | 568, 2100, 2162, 2501, 2541 |
| TseFI | GTSAC | 5 cut(s) | 1107, 2167, 2224, 2302, 2536 |
| Tsp45I | GTSAC | 5 cut(s) | 1107, 2167, 2224, 2302, 2536 |
| TspGWI | ACGGA | 1 cut(s) | 2051 |
| TspRI | CASTG | 5 cut(s) | 568, 2100, 2162, 2501, 2541 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 482, 2027 |
| VpaK11BI | GGWCC | 3 cut(s) | 111, 596, 1565 |
| VspI | ATTAAT | 1 cut(s) | 2055 |
| XapI | RAATTY | 6 cut(s) | 333, 1060, 1487, 1806, 1818, 1938 |
| XceI | RCATGY | 2 cut(s) | 1008, 1903 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 479, 2381 |
| XmnI | GAANNNNTTC | 3 cut(s) | 744, 1821, 2252 |
| XspI | CTAG | 4 cut(s) | 87, 480, 996, 2445 |
| ZrmI | AGTACT | 1 cut(s) | 2449 |
| Zsp2I | ATGCAT | 1 cut(s) | 864 |