Rroxscaffold_2G00084060

Plant protein of unknown function (DUF863)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0003069
Physical Location & Seq
Forward (+)
6542755 .. 6546808
4054 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00084060.1

Sequence Viewer

Length: 2385 bp
ATGGGAACTGAAGTACAGTCAAAGATGTATCTACCAGGATATTATTCCATACCGACTCTAACTAACAATGCTGGCCATGGTGGATGGTCCCTACTGCACGAGAACAAAACCTTGAAGAATGGGCAACAATATGACATACTCCCAACGAGGCCAGTTGTTGATGGATTTCATGGATGCAGTAAGGAACAAGTGAGGCAAATGATATTGAAGCATGAATCCATTTTCAAACATCAGCTCAATGAACTTCATCGTCTTTACGAAAGACAAAAGGACTTGATCAATGAGATCAAAAGCAAAGAACTGCTCAAACATCAAAAAGAAGCAGCGACATCACAATTACCTCTTTTTTTCATCTGCAAACTAGTGGTGGCCCCAGCCAAAGTGGAGTCAAGAAGCTTGAGAGAAGATTGTTCAACCTTGAACTTCCAGCTGATGAATACATCAGTGATGGAGAAGAACCAGAAGGTGTTTGCTTGGGGCCAGCGACCGAAAAACTATCCTCCTATCAGAAGAAATGAGGCTCAAGTGTCATTTAATCGCATTGGTGAATCATCTGGCAATAACAATAGTGCTTTGAGCTCTGGCTTGTATCTAGAAAGAAGCTATGGTTTGACCACTCTGAATGAACCCATTCAGATTGATAAAATGTCTGCGTCAACAAATGTGTACAGAGGTGTCTGGCCTTTTGCAAAGAAGTTCCCGGAGAACCCACAACTGGGAAAGGATGGAGGAGTTAGTAATCTGCATGGGAAGAATCAAAGCAACCAAATGGAGTGGTTAACAAATGCTCTCAAGGCTGATCAAACAAGAAATTCTTTGGTGGAAGTTTTGGCCTTCGAGATTCTCAGAAGCCTTGCGAACCATCAGAAACTGAAGCTAGGGAAAGCATGTGAGCCTGCCAAGAGGACAATTTTTGGTATAGAAATCTCTGAAAGAGATATAAATCCATCTGGTAAGGCTTCTCAGTCTGATGTGGCCGCCATTTCTGAGTCACCTCCTACTTGGGCAAGACCTCCAAGTAGCTTGAGCCACAACCGGACATCAGGTCAATCGAACAGTTTGTTTAACACCTCCACACACTCTAATGGGGCTTCAATGATGTTGCAGCAAAACCCTGAAGTTATCAGGGACAGATTGCTCGTAGATTGCAATTCTATACCATTAAATCCAGGTCTGGGATCTGAAGTGTCACACCACAATGGTGTTTGCTTTCGCGCCAAGATTCAGAGCAATGAATTACACAGTTATCACCCTTCAATCAGACTTGGCTTCCCCTATGCAGACAGCAGCTATAGTTCTGCTTCTAAAGATTTTACACAACATGTTCCTCAGTGGCAGTATTCGAGTGTAGGTTGCAGGGCGAATGCAAAGCCTTCACCTAATGTGCATGATAATAAATTTCTTTACAGACTGAGGAACCAAGAAACACCACAAGGAAGATTGCATTGGCTTGAGGCAGCTTCACTTTGTAATGGTCCACTTGCTTCAGCAGTTGACAATGACAATTCTGTTGGAGTTGGAGATCAACTGAAAGCACAGAGTTTATTTTCGAAAAAGGGATTGGATAATGACAATGCTTATTCAGGGCACCAAATAGACTTGAACCGATGTTTAACTGAAGAAGAAACTCGAATAGCTGTGCAGGCACCAGTAATAGTTGCAACAGATGTCAATGTTGGAGAAGCTTCTGAGGAAAGAAAATGTACAGAACTTTTTGATTCATCTCATGATGGTTTATTCAGGGTTGCAGCTGAGGCTCTGGTTGCCATCTCATCATCACAAGCTCATGAGATGCAGGAAAATGCTGCACATGGTCTTGATCAAGAAATTTCTGCTTGTCGTGAAGATGATGCAACAGTAATTGACAACTCCCTTCTTTGGTTTGCAGAAATAGTTTCTTCAAACGAAAAAAATCTTGAACAGACGGATAATGTGGTAAAAGTTAAGGGAGCGATGGATTACTTTGAGTACATGACATTAAATATGGCGGAAACCAAGTTAGAGCAGTGCTGCAATGTGCCTTCAGACAACCCAAAAGAAGTGCCGCTGTCAAAACGGCCACAAAGGGGTCAGACGAGGAGAGGGAGGCAACGAAAGGACTTCCAGAGGGATGTTCTCCCTGGTATTGCTTGTTTGTCAAGAAATGAGGTGACTGAGGATCTTCAAACATTTGAAGGGTCGATTAGAGCAAGTGGTGGCAGCTGGCAGTCAGGTTTATCACAGAGAAATGCTGGTAAGGTTGGCGGGGGAAGAGGGAGGAAGCGTTTGGGAACTTGCGCACTACCTACTTCTAGTGCTGTGCAGGCTGCAGTTAGTCAGCCCCAGATGAGCAGCAGCCTCAATGTGGGGAGCTGCAGGAACCTGAGGAAAGAAGTATGGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF863

Protein Analysis

794

Amino Acids

88.14

Weight (kDa)

8.53

Isoelectric Point (pI)

45.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF863 PF05904 507 - 774 6.6e-59 Plant protein of unknown function (DUF863)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2278
AccB1I GGYRCC 2 cut(s) 1587, 1645
AccII CGCG 1 cut(s) 1215
AciI CCGC 5 cut(s) 978, 1988, 2045, 2244, 2380
AclWI GGATC 2 cut(s) 1186, 2166
AcoI YGGCCR 3 cut(s) 73, 975, 2057
AcsI RAATTY 3 cut(s) 811, 1397, 1827
AcuI CTGAAG 7 cut(s) 30, 893, 1137, 1203, 1470, 1638, 2007
AfaI GTAC 4 cut(s) 15, 668, 1705, 1970
AfiI CCNNNNNNNGG 6 cut(s) 715, 716, 1175, 1878, 2066, 2344
AflIII ACRYGT 1 cut(s) 1321
AhdI GACNNNNNGTC 1 cut(s) 1044
AhlI ACTAGT 1 cut(s) 361
AjnI CCWGG 3 cut(s) 34, 1168, 2119
AjuI GAANNNNNNNTTGG 4 cut(s) 1429, 1461, 1544, 1576
AleI CACNNNNGTG 1 cut(s) 1200
Alw21I GWGCWC 1 cut(s) 581
AlwI GGATC 2 cut(s) 1186, 2166
AlwNI CAGNNNCTG 1 cut(s) 871
AoxI GGCC 8 cut(s) 73, 149, 369, 478, 680, 831, 975, 2057
ApoI RAATTY 3 cut(s) 811, 1397, 1827
Asp700I GAANNNNTTC 1 cut(s) 630
AspLEI GCGC 2 cut(s) 1217, 2279
AspS9I GGNCC 4 cut(s) 87, 370, 478, 1475
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 5 cut(s) 557, 984, 1241, 1368, 2161
AsuII TTCGAA 1 cut(s) 1550
AvaII GGWCC 2 cut(s) 87, 1475
AxyI CCTNAGG 1 cut(s) 2363
BaeGI GKGCMC 1 cut(s) 1590
BalI TGGCCA 1 cut(s) 75
BanI GGYRCC 2 cut(s) 1587, 1645
BanII GRGCYC 1 cut(s) 581
BauI CACGAG 1 cut(s) 98
Bbv12I GWGCWC 1 cut(s) 581
BbvCI CCTCAGC 1 cut(s) 1752
BccI CCATC 9 cut(s) 78, 155, 442, 719, 870, 955, 1724, 1775, 1948
BceAI ACGGC 1 cut(s) 2072
BciT130I CCWGG 3 cut(s) 36, 1170, 2121
BclI TGATCA 3 cut(s) 276, 799, 1819
BcnI CCSGG 1 cut(s) 701
BcuI ACTAGT 1 cut(s) 361
BfaI CTAG 4 cut(s) 362, 593, 878, 2292
BfmI CTRYAG 3 cut(s) 1291, 2307, 2353
Bme1390I CCNGG 4 cut(s) 36, 701, 1170, 2121
Bme18I GGWCC 2 cut(s) 87, 1475
BmeRI GACNNNNNGTC 1 cut(s) 1044
BmgT120I GGNCC 4 cut(s) 87, 370, 478, 1475
BmiI GGNNCC 7 cut(s) 89, 372, 479, 1418, 1589, 1647, 2360
BmrFI CCNGG 4 cut(s) 36, 701, 1170, 2121
BmrI ACTGGG 1 cut(s) 725
BmsI GCATC 3 cut(s) 164, 1782, 1840
BmuI ACTGGG 1 cut(s) 725
Bpu10I CCTNAGC 1 cut(s) 1752
Bpu14I TTCGAA 1 cut(s) 1550
BpuEI CTTGAG 5 cut(s) 418, 507, 776, 1045, 1472
BpuMI CCSGG 1 cut(s) 701
BsaBI GATNNNNATC 1 cut(s) 942
BsaJI CCNNGG 2 cut(s) 76, 2119
BsaWI WCCGGW 1 cut(s) 1035
BsaXI ACNNNNNCTCC 2 cut(s) 2248, 2278
Bsc4I CCNNNNNNNGG 6 cut(s) 715, 716, 1175, 1878, 2066, 2344
Bse1I ACTGG 3 cut(s) 152, 720, 1649
Bse21I CCTNAGG 1 cut(s) 2363
Bse3DI GCAATG 2 cut(s) 1237, 2020
Bse8I GATNNNNATC 1 cut(s) 942
BseBI CCWGG 3 cut(s) 36, 1170, 2121
BseDI CCNNGG 2 cut(s) 76, 2119
BseGI GGATG 4 cut(s) 89, 179, 730, 2116
BseJI GATNNNNATC 1 cut(s) 942
BseLI CCNNNNNNNGG 6 cut(s) 715, 716, 1175, 1878, 2066, 2344
BseMI GCAATG 2 cut(s) 1237, 2020
BseMII CTCAG 9 cut(s) 859, 977, 978, 1343, 1403, 1680, 1743, 2145, 2354
BseNI ACTGG 3 cut(s) 152, 720, 1649
BseRI GAGGAG 2 cut(s) 744, 2092
BseSI GKGCMC 1 cut(s) 1590
BseYI CCCAGC 1 cut(s) 373
BsgI GTGCAG 4 cut(s) 80, 1661, 1791, 2321
Bsh1236I CGCG 1 cut(s) 1215
Bsh1285I CGRYCG 1 cut(s) 488
BshFI GGCC 8 cut(s) 75, 151, 371, 480, 682, 833, 977, 2059
BshNI GGYRCC 2 cut(s) 1587, 1645
BsiEI CGRYCG 1 cut(s) 488
BsiHKAI GWGCWC 1 cut(s) 581
BsiSI CCGG 2 cut(s) 701, 1036
BslFI GGGAC 2 cut(s) 73, 1142
BslI CCNNNNNNNGG 6 cut(s) 715, 716, 1175, 1878, 2066, 2344
BsmFI GGGAC 2 cut(s) 73, 1142
BsmI GAATGC 1 cut(s) 1369
BsnI GGCC 8 cut(s) 75, 151, 371, 480, 682, 833, 977, 2059
Bsp119I TTCGAA 1 cut(s) 1550
Bsp1286I GDGCHC 2 cut(s) 581, 1590
Bsp1407I TGTACA 2 cut(s) 666, 1703
Bsp143I GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
Bsp19I CCATGG 1 cut(s) 76
BspACI CCGC 5 cut(s) 978, 1988, 2045, 2244, 2380
BspANI GGCC 8 cut(s) 75, 151, 371, 480, 682, 833, 977, 2059
BspCNI CTCAG 9 cut(s) 858, 976, 979, 1342, 1404, 1681, 1744, 2146, 2355
BspFNI CGCG 1 cut(s) 1215
BspHI TCATGA 2 cut(s) 1726, 1786
BspLI GGNNCC 7 cut(s) 89, 372, 479, 1418, 1589, 1647, 2360
BspMAI CTGCAG 2 cut(s) 2311, 2357
BspPI GGATC 2 cut(s) 1186, 2166
BspT104I TTCGAA 1 cut(s) 1550
BspT107I GGYRCC 2 cut(s) 1587, 1645
BsrDI GCAATG 2 cut(s) 1237, 2020
BsrGI TGTACA 2 cut(s) 666, 1703
BsrI ACTGG 3 cut(s) 152, 720, 1649
BssECI CCNNGG 2 cut(s) 76, 2119
BssMI GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
BssSI CACGAG 1 cut(s) 98
BssT1I CCWWGG 1 cut(s) 76
Bst2BI CACGAG 1 cut(s) 98
Bst2UI CCWGG 3 cut(s) 36, 1170, 2121
Bst4CI ACNGT 4 cut(s) 18, 1058, 1244, 1858
Bst6I CTCTTC 1 cut(s) 2245
BstAUI TGTACA 2 cut(s) 666, 1703
BstBI TTCGAA 1 cut(s) 1550
BstC8I GCNNGC 6 cut(s) 73, 482, 897, 1644, 2204, 2304
BstDEI CTNAG 9 cut(s) 845, 963, 987, 1329, 1412, 1689, 1752, 2154, 2363
BstDSI CCRYGG 1 cut(s) 76
BstF5I GGATG 4 cut(s) 89, 179, 730, 2116
BstFNI CGCG 1 cut(s) 1215
BstHHI GCGC 2 cut(s) 1217, 2279
BstKTI GATC 7 cut(s) 279, 288, 802, 1181, 1525, 1822, 2161
BstMBI GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
BstMCI CGRYCG 1 cut(s) 488
BstMWI GCNNNNNNNGC 5 cut(s) 794, 1643, 1754, 1763, 2303
BstNI CCWGG 3 cut(s) 36, 1170, 2121
BstNSI RCATGY 2 cut(s) 891, 1325
BstSCI CCNGG 4 cut(s) 34, 699, 1168, 2119
BstSFI CTRYAG 3 cut(s) 1291, 2307, 2353
BstSLI GKGCMC 1 cut(s) 1590
BstUI CGCG 1 cut(s) 1215
BstX2I RGATCY 2 cut(s) 1178, 2158
BstYI RGATCY 2 cut(s) 1178, 2158
Bsu36I CCTNAGG 1 cut(s) 2363
BsuRI GGCC 8 cut(s) 75, 151, 371, 480, 682, 833, 977, 2059
BtgI CCRYGG 1 cut(s) 76
BtgZI GCGATG 1 cut(s) 1967
BtsCI GGATG 4 cut(s) 89, 179, 730, 2116
BtsI GCAGTG 1 cut(s) 2012
BtsIMutI CAGTG 3 cut(s) 450, 1337, 2012
Cac8I GCNNGC 6 cut(s) 73, 482, 897, 1644, 2204, 2304
CaiI CAGNNNCTG 1 cut(s) 871
CciI TCATGA 2 cut(s) 1726, 1786
CfoI GCGC 2 cut(s) 1217, 2279
Cfr13I GGNCC 4 cut(s) 87, 370, 478, 1475
CseI GACGC 1 cut(s) 642
Csp6I GTAC 4 cut(s) 14, 667, 1704, 1969
CspCI CAANNNNNGTGG 2 cut(s) 755, 790
CviQI GTAC 4 cut(s) 14, 667, 1704, 1969
DdeI CTNAG 9 cut(s) 845, 963, 987, 1329, 1412, 1689, 1752, 2154, 2363
DpnI GATC 7 cut(s) 278, 287, 801, 1180, 1524, 1821, 2160
DpnII GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
DriI GACNNNNNGTC 1 cut(s) 1044
EaeI YGGCCR 3 cut(s) 73, 975, 2057
Eam1104I CTCTTC 1 cut(s) 2245
Eam1105I GACNNNNNGTC 1 cut(s) 1044
EarI CTCTTC 1 cut(s) 2245
EciI GGCGGA 1 cut(s) 2003
Ecl136II GAGCTC 1 cut(s) 579
Eco130I CCWWGG 1 cut(s) 76
Eco24I GRGCYC 1 cut(s) 581
Eco47I GGWCC 2 cut(s) 87, 1475
Eco53kI GAGCTC 1 cut(s) 579
Eco57I CTGAAG 7 cut(s) 30, 893, 1137, 1203, 1470, 1638, 2007
Eco81I CCTNAGG 1 cut(s) 2363
EcoICRI GAGCTC 1 cut(s) 579
EcoRII CCWGG 3 cut(s) 34, 1168, 2119
EcoT14I CCWWGG 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 581
ErhI CCWWGG 1 cut(s) 76
FalI AAGNNNNNCTT 2 cut(s) 799, 831
FaqI GGGAC 2 cut(s) 73, 1142
FauI CCCGC 1 cut(s) 2237
FbaI TGATCA 3 cut(s) 276, 799, 1819
FokI GGATG 4 cut(s) 96, 186, 737, 2123
FriOI GRGCYC 1 cut(s) 581
FspBI CTAG 4 cut(s) 362, 593, 878, 2292
FspI TGCGCA 1 cut(s) 2278
GlaI GCGC 2 cut(s) 1216, 2278
GsaI CCCAGC 1 cut(s) 377
HaeIII GGCC 8 cut(s) 75, 151, 371, 480, 682, 833, 977, 2059
HapII CCGG 2 cut(s) 701, 1036
HgaI GACGC 1 cut(s) 642
HhaI GCGC 2 cut(s) 1217, 2279
Hin6I GCGC 2 cut(s) 1215, 2277
HinP1I GCGC 2 cut(s) 1215, 2277
HincII GTYRAC 3 cut(s) 657, 780, 1495
HindII GTYRAC 3 cut(s) 657, 780, 1495
HindIII AAGCTT 2 cut(s) 394, 1683
HinfI GANTC 9 cut(s) 55, 215, 386, 548, 754, 841, 989, 1222, 1718
HpaI GTTAAC 1 cut(s) 780
HpaII CCGG 2 cut(s) 701, 1036
HphI GGTGA 5 cut(s) 557, 984, 1241, 1368, 2161
Hpy166II GTNNAC 5 cut(s) 657, 667, 780, 1478, 1495
Hpy8I GTNNAC 5 cut(s) 657, 667, 780, 1478, 1495
HpyAV CCTTC 7 cut(s) 457, 844, 1263, 1383, 1883, 2031, 2168
HpyCH4III ACNGT 4 cut(s) 18, 1058, 1244, 1858
HpyF10VI GCNNNNNNNGC 5 cut(s) 794, 1643, 1754, 1763, 2303
HpyF3I CTNAG 9 cut(s) 845, 963, 987, 1329, 1412, 1689, 1752, 2154, 2363
HspAI GCGC 2 cut(s) 1215, 2277
Ksp22I TGATCA 3 cut(s) 276, 799, 1819
KspAI GTTAAC 1 cut(s) 780
Kzo9I GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
LmnI GCTCC 2 cut(s) 1949, 2349
LweI GCATC 3 cut(s) 164, 1782, 1840
MaeI CTAG 4 cut(s) 362, 593, 878, 2292
MaeIII GTNAC 3 cut(s) 990, 1188, 2149
MalI GATC 7 cut(s) 278, 287, 801, 1180, 1524, 1821, 2160
MboI GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
MflI RGATCY 2 cut(s) 1178, 2158
MhlI GDGCHC 2 cut(s) 581, 1590
MlsI TGGCCA 1 cut(s) 75
MluCI AATT 9 cut(s) 335, 811, 909, 1150, 1235, 1397, 1504, 1827, 1860
MluNI TGGCCA 1 cut(s) 75
MlyI GAGTC 3 cut(s) 49, 395, 998
MmeI TCCRAC 3 cut(s) 1492, 1498, 1657
Mox20I TGGCCA 1 cut(s) 75
MroXI GAANNNNTTC 1 cut(s) 630
MscI TGGCCA 1 cut(s) 75
MseI TTAA 7 cut(s) 534, 779, 1065, 1163, 1613, 1944, 1979
MslI CAYNNNNRTG 3 cut(s) 1083, 1197, 1200
Msp20I TGGCCA 1 cut(s) 75
MspA1I CMGCKG 4 cut(s) 430, 1751, 2047, 2202
MspI CCGG 2 cut(s) 701, 1036
MspR9I CCNGG 4 cut(s) 36, 701, 1170, 2121
Mva1269I GAATGC 1 cut(s) 1369
MvaI CCWGG 3 cut(s) 36, 1170, 2121
MvnI CGCG 1 cut(s) 1215
MwoI GCNNNNNNNGC 5 cut(s) 794, 1643, 1754, 1763, 2303
NciI CCSGG 1 cut(s) 701
NcoI CCATGG 1 cut(s) 76
NdeII GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
NlaIV GGNNCC 7 cut(s) 89, 372, 479, 1418, 1589, 1647, 2360
NmuCI GTSAC 3 cut(s) 990, 1188, 2149
NsbI TGCGCA 1 cut(s) 2278
NspI RCATGY 2 cut(s) 891, 1325
NspV TTCGAA 1 cut(s) 1550
OliI CACNNNNGTG 1 cut(s) 1200
PagI TCATGA 2 cut(s) 1726, 1786
PciI ACATGT 1 cut(s) 1321
PctI GAATGC 1 cut(s) 1369
PdmI GAANNNNTTC 1 cut(s) 630
PfeI GAWTC 6 cut(s) 215, 548, 754, 841, 1222, 1718
PfoI TCCNGGA 1 cut(s) 699
PleI GAGTC 3 cut(s) 49, 394, 997
PpsI GAGTC 3 cut(s) 49, 394, 997
PscI ACATGT 1 cut(s) 1321
Psp124BI GAGCTC 1 cut(s) 581
Psp6I CCWGG 3 cut(s) 34, 1168, 2119
PspFI CCCAGC 1 cut(s) 373
PspGI CCWGG 3 cut(s) 34, 1168, 2119
PspN4I GGNNCC 7 cut(s) 89, 372, 479, 1418, 1589, 1647, 2360
PspPI GGNCC 4 cut(s) 87, 370, 478, 1475
PstI CTGCAG 2 cut(s) 2311, 2357
PstNI CAGNNNCTG 1 cut(s) 871
PsuI RGATCY 2 cut(s) 1178, 2158
PvuII CAGCTG 3 cut(s) 430, 1751, 2202
RsaI GTAC 4 cut(s) 15, 668, 1705, 1970
RsaNI GTAC 4 cut(s) 14, 667, 1704, 1969
RseI CAYNNNNRTG 3 cut(s) 1083, 1197, 1200
SacI GAGCTC 1 cut(s) 581
SaqAI TTAA 7 cut(s) 534, 779, 1065, 1163, 1613, 1944, 1979
Sau3AI GATC 7 cut(s) 276, 285, 799, 1178, 1522, 1819, 2158
Sau96I GGNCC 4 cut(s) 87, 370, 478, 1475
SchI GAGTC 3 cut(s) 49, 395, 998
ScrFI CCNGG 4 cut(s) 36, 701, 1170, 2121
SduI GDGCHC 2 cut(s) 581, 1590
SfaNI GCATC 3 cut(s) 164, 1782, 1840
SfcI CTRYAG 3 cut(s) 1291, 2307, 2353
SfuI TTCGAA 1 cut(s) 1550
SinI GGWCC 2 cut(s) 87, 1475
SmiMI CAYNNNNRTG 3 cut(s) 1083, 1197, 1200
SmlI CTYRAG 5 cut(s) 397, 522, 791, 1024, 1451
SmoI CTYRAG 5 cut(s) 397, 522, 791, 1024, 1451
SpeI ACTAGT 1 cut(s) 361
Sse9I AATT 9 cut(s) 335, 811, 909, 1150, 1235, 1397, 1504, 1827, 1860
SsiI CCGC 5 cut(s) 978, 1988, 2045, 2244, 2380
SspMI CTAG 4 cut(s) 362, 593, 878, 2292
SstI GAGCTC 1 cut(s) 581
StyD4I CCNGG 4 cut(s) 34, 699, 1168, 2119
StyI CCWWGG 1 cut(s) 76
TaaI ACNGT 4 cut(s) 18, 1058, 1244, 1858
TaqI TCGA 6 cut(s) 837, 1052, 1343, 1550, 1630, 2180
TaqII GACCGA 1 cut(s) 502
TasI AATT 9 cut(s) 335, 811, 909, 1150, 1235, 1397, 1504, 1827, 1860
TatI WGTACW 4 cut(s) 13, 666, 1703, 1968
TauI GCSGC 2 cut(s) 980, 2047
TfiI GAWTC 6 cut(s) 215, 548, 754, 841, 1222, 1718
Tru1I TTAA 7 cut(s) 534, 779, 1065, 1163, 1613, 1944, 1979
Tru9I TTAA 7 cut(s) 534, 779, 1065, 1163, 1613, 1944, 1979
TscAI CASTG 3 cut(s) 450, 1337, 2012
TseFI GTSAC 3 cut(s) 990, 1188, 2149
Tsp45I GTSAC 3 cut(s) 990, 1188, 2149
TspDTI ATGAA 9 cut(s) 158, 228, 236, 255, 340, 449, 639, 1248, 1710
TspGWI ACGGA 1 cut(s) 1940
TspRI CASTG 3 cut(s) 450, 1337, 2012
VpaK11BI GGWCC 2 cut(s) 87, 1475
XapI RAATTY 3 cut(s) 811, 1397, 1827
XbaI TCTAGA 1 cut(s) 592
XceI RCATGY 2 cut(s) 891, 1325
XmnI GAANNNNTTC 1 cut(s) 630
XspI CTAG 4 cut(s) 362, 593, 878, 2292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.