Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004576

Physical Location & Seq

Genomic Coordinates Forward (+)

36468475 .. 36470088

Gene Structure 1614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g48480.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGTTCGGCTTCCAATCCCAACCGCCAAAACCTGTAATTCAAACTTCGTCTCCAAGAAGCAACAATGTCTCTCCCTCCTCAGCCTCTGCCTCTCCTTCAAACCCTTCTCTCAAATCCACGCCCAAATCCATCTCTCCGGCCTCCACAGAGACCCCTACCTCCTCACCCAGCTCATCAAATTCTGCGCTCTCTCTCCCGCCAAAAACTTCACCTACGCTCAAACCCTCCTCCGCCACTCCTCCGCCTCGCCGCCGTCGTCCTGGAACTTCCTCATCCGAGGCTACGCGTCCAGTGACTCCCCCAGAGAGGCATTCTTGGCCTTTCGCTCAATGCTCCGCCGCGAAACTAGACCCAACAAGCTCACATTCCCTTTCCTTCTCAAGTGCTGCGCGATGGCCCCGGCGCTGAGGGAAGGGAGGCAGGCTCATGGTTGTGTTTGGAAGTTGGGTTTGGAGTGTGATGTGTACGTTGGGAACAATTTGGTTCATTTCTATGGGGTTTGCAAGAAAGTCAAAGATGCAGTCAAGGTGTTTGAGGAAATGTCTGACAGAAGCGTTGTGTCGTGGAACGCGGTGGTGACCGCCTGCGTTGATAATTTGCGGATGGATGATGGGATTGGGTATTTTTTGAGGATGAGGGAGTGTGGGTTTGAGCCGGACGAGACTACTATGGTGGTGGTGTTGAATGCGTGCTCCGAGATTGGGAACTTGGGGTTAGGAAGAGGGGTTCATTCCTATGTAATTGCGAGAGGGTTGGTTTTGAATTGTCAGCTGGGTACTGCGCTTGTGGACATGTATGCGAAATCGGGGGCTTTGGGATATGCCAGGTTGGTTTTTGATAGAATGGAGGGGAGGAATGTGTGGACTTGGAGTGCGATGATTCTAGGCCTAGCTCAGCATGGGTTTGCCAAGGAAGCGCTTGAGCTTTTCCAAAAGATGCTGAAGTCTTCGATATGCCCGAATTATGTCACCTTTCTCGGGGTCCTATGTGCTTGTAGCCATGCTGGACTGGTGGATGATGGATACCGGTACTTTCATGATATGGAACACGTTTATGGAATTACACCCATGATGGTACATTACGGTGCCATGGTGGATATCTTAGGGCGTTCTGGCCGTCTGAAGGAGGCTTATAGCTTCATGAAGAGCATGCCCTTTGAACCTGATCCCATTGTATGCAGAACATTGCTCAGTGCATGCAGTACTCATGATGTTAATGACGAACTAGGGGTAGGAAATAAAGTTAGAGAGAAATTGCTTGAATTGGAGCCGAGTAGGAGTGGGAATTTTGTGATGGTGGCAAATTTTTTAGCTGAAACTGGGATGTGGGACAAAGCAGCCAATTTGAGGAAGGTTATGAAAGAAAAACGGATGAAGAAGAGGGCAGGGGAGAGTAGCATTGAGTTGGGTGGATCCATCCATAAGTTCTTTTCTGGCTCTAGTTCTCAATCTGACTATGAGGATATCTACCAGATGCTAGATGTATTGAGCTTGCACATGAAGTTGGTTGACATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009668 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext PPR Peptidase_M41

Protein Analysis

506

Amino Acids

56.54

Weight (kDa)

8.76

Isoelectric Point (pI)

39.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	87 - 131	2.7e-07	PPR repeat family
PPR_2	PF13041	185 - 232	4.9e-07	PPR repeat family
PPR_2	PF13041	286 - 333	1.8e-07	PPR repeat family
PPR	PF01535	289 - 317	6.5e-07	PPR repeat
E_motif	PF20431	409 - 468	4e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36730
fragaria_vesca	FvH4_6g48480
malus_domestica	MD00G1130700.v1.1 MD09G1051700.v1.1
prunus_persica	Prupe.3G267000_v2.0.a1
pyrus_communis	pycom111g04300 pycom17g04660 pycom17g04690
rosa_chinensis	RchiOBHm_Chr2g0168371 RchiOBHm_Chr5g0064681 RchiOBHm_Chr5g0064691
rosa_laevigata	RLG00000004634 RLG00000011887 RLG00000021772 RLG00000024779 RLG00000034413
rosa_multiflora	Rmu_sc0000524.1_g000031 Rmu_sc0003354.1_g000021 Rmu_sc0039228.1_g000001 Rmu_ssc0000002.1_g000001
rosa_roxburghii	Rroxscaffold_2G00113250
rosa_rugosa	Rorug02G0533700
rosa_samantha	Rh1AG067000 Rh2BG616000 Rh2CG583800 Rh2DG626100 Rh4BG210500 Rh5AG077100
rosa_wichuraiana	Rw5G007110 Rw5G029530 Rw6G007180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1085
AccII	CGCG	4 cut(s)	287, 342, 392, 572
AclWI	GGATC	3 cut(s)	1160, 1407, 1420
AcoI	YGGCCR	1 cut(s)	1114
AcsI	RAATTY	3 cut(s)	179, 1285, 1303
AcuI	CTGAAG	2 cut(s)	962, 1142
AfaI	GTAC	5 cut(s)	467, 778, 1031, 1077, 1204
AfeI	AGCGCT	1 cut(s)	918
AfiI	CCNNNNNNNGG	5 cut(s)	307, 702, 978, 1123, 1347
AflIII	ACRYGT	4 cut(s)	285, 792, 1048, 1512
AgeI	ACCGGT	1 cut(s)	1026
AgsI	TTSAA	6 cut(s)	42, 100, 685, 763, 1160, 1262
AjnI	CCWGG	2 cut(s)	260, 824
AjuI	GAANNNNNNNTTGG	2 cut(s)	434, 466
AloI	GAACNNNNNNTCC	2 cut(s)	711, 743
AluBI	AGCT	8 cut(s)	172, 361, 772, 893, 925, 1137, 1313, 1491
AluI	AGCT	8 cut(s)	172, 361, 772, 893, 925, 1137, 1313, 1491
Alw21I	GWGCWC	1 cut(s)	695
Alw26I	GTCTC	4 cut(s)	55, 74, 144, 656
AlwI	GGATC	3 cut(s)	1160, 1407, 1420
AlwNI	CAGNNNCTG	1 cut(s)	87
Ama87I	CYCGRG	1 cut(s)	977
Aor51HI	AGCGCT	1 cut(s)	918
AoxI	GGCC	5 cut(s)	139, 318, 396, 886, 1114
ApeKI	GCWGC	2 cut(s)	387, 1337
ApoI	RAATTY	3 cut(s)	179, 1285, 1303
ArsI	GACNNNNNNTTYG	2 cut(s)	507, 539
AsiGI	ACCGGT	1 cut(s)	1026
AspLEI	GCGC	5 cut(s)	188, 392, 406, 784, 919
AspS9I	GGNCC	2 cut(s)	397, 982
AsuC2I	CCSGG	1 cut(s)	401
AsuHPI	GGTGA	4 cut(s)	157, 202, 589, 961
AvaI	CYCGRG	1 cut(s)	977
AvaII	GGWCC	1 cut(s)	982
BamHI	GGATCC	1 cut(s)	1412
BanI	GGYRCC	1 cut(s)	1085
BbsI	GAAGAC	1 cut(s)	939
Bbv12I	GWGCWC	1 cut(s)	695
BbvCI	CCTCAGC	2 cut(s)	80, 407
BbvI	GCAGC	2 cut(s)	374, 1349
BccI	CCATC	8 cut(s)	138, 388, 598, 605, 1013, 1066, 1288, 1424
BceAI	ACGGC	2 cut(s)	238, 1101
BciT130I	CCWGG	2 cut(s)	262, 826
BciVI	GTATCC	1 cut(s)	1016
BcnI	CCSGG	1 cut(s)	401
BcoDI	GTCTC	4 cut(s)	55, 74, 144, 656
BfaI	CTAG	6 cut(s)	348, 884, 890, 1226, 1440, 1478
BfoI	RGCGCY	2 cut(s)	407, 920
BfuI	GTATCC	1 cut(s)	1016
BisI	GCNGC	4 cut(s)	251, 340, 388, 1338
BlpI	GCTNAGC	1 cut(s)	894
BlsI	GCNGC	4 cut(s)	252, 341, 389, 1339
BmcAI	AGTACT	1 cut(s)	1204
Bme1390I	CCNGG	3 cut(s)	262, 401, 826
Bme18I	GGWCC	1 cut(s)	982
BmeT110I	CYCGRG	1 cut(s)	977
BmgT120I	GGNCC	2 cut(s)	397, 982
BmiI	GGNNCC	5 cut(s)	399, 983, 1087, 1269, 1414
BmrFI	CCNGG	3 cut(s)	262, 401, 826
BmrI	ACTGGG	1 cut(s)	1329
BmsI	GCATC	3 cut(s)	508, 927, 1464
BmuI	ACTGGG	1 cut(s)	1329
BpiI	GAAGAC	1 cut(s)	939
BplI	GAGNNNNNCTC	2 cut(s)	409, 441
Bpu10I	CCTNAGC	2 cut(s)	80, 407
Bpu1102I	GCTNAGC	1 cut(s)	894
BpuEI	CTTGAG	2 cut(s)	365, 941
BpuMI	CCSGG	1 cut(s)	401
BsaI	GGTCTC	1 cut(s)	144
BsaJI	CCNNGG	4 cut(s)	277, 399, 909, 1089
BsaWI	WCCGGW	1 cut(s)	1026
BsaXI	ACNNNNNCTCC	4 cut(s)	35, 65, 632, 662
Bsc4I	CCNNNNNNNGG	5 cut(s)	307, 702, 978, 1123, 1347
Bse118I	RCCGGY	1 cut(s)	1026
Bse1I	ACTGG	3 cut(s)	291, 1014, 1324
Bse3DI	GCAATG	1 cut(s)	1184
BseBI	CCWGG	2 cut(s)	262, 826
BseDI	CCNNGG	4 cut(s)	277, 399, 909, 1089
BseGI	GGATG	8 cut(s)	273, 609, 613, 639, 1021, 1329, 1377, 1416
BseLI	CCNNNNNNNGG	5 cut(s)	307, 702, 978, 1123, 1347
BseMI	GCAATG	1 cut(s)	1184
BseMII	CTCAG	4 cut(s)	94, 398, 908, 1204
BseNI	ACTGG	3 cut(s)	291, 1014, 1324
BseRI	GAGGAG	4 cut(s)	68, 152, 218, 229
BseXI	GCAGC	2 cut(s)	374, 1349
BseYI	CCCAGC	2 cut(s)	168, 772
Bsh1236I	CGCG	4 cut(s)	287, 342, 392, 572
BshFI	GGCC	5 cut(s)	141, 320, 398, 888, 1116
BshNI	GGYRCC	1 cut(s)	1085
BshTI	ACCGGT	1 cut(s)	1026
BsiHKAI	GWGCWC	1 cut(s)	695
BsiHKCI	CYCGRG	1 cut(s)	977
BsiSI	CCGG	4 cut(s)	138, 401, 656, 1027
BslFI	GGGAC	1 cut(s)	1343
BslI	CCNNNNNNNGG	5 cut(s)	307, 702, 978, 1123, 1347
BsmAI	GTCTC	4 cut(s)	55, 74, 144, 656
BsmBI	CGTCTC	1 cut(s)	55
BsmFI	GGGAC	1 cut(s)	1343
BsmI	GAATGC	2 cut(s)	311, 691
BsnI	GGCC	5 cut(s)	141, 320, 398, 888, 1116
Bso31I	GGTCTC	1 cut(s)	144
BsoBI	CYCGRG	1 cut(s)	977
Bsp1286I	GDGCHC	1 cut(s)	695
Bsp143I	GATC	2 cut(s)	1165, 1412
Bsp1720I	GCTNAGC	1 cut(s)	894
Bsp19I	CCATGG	1 cut(s)	1089
BspANI	GGCC	5 cut(s)	141, 320, 398, 888, 1116
BspCNI	CTCAG	4 cut(s)	93, 399, 907, 1203
BspFNI	CGCG	4 cut(s)	287, 342, 392, 572
BspHI	TCATGA	3 cut(s)	1036, 1140, 1207
BspLI	GGNNCC	5 cut(s)	399, 983, 1087, 1269, 1414
BspPI	GGATC	3 cut(s)	1160, 1407, 1420
BspQI	GCTCTTC	1 cut(s)	1139
BspT107I	GGYRCC	1 cut(s)	1085
BspTNI	GGTCTC	1 cut(s)	144
BsrDI	GCAATG	1 cut(s)	1184
BsrFI	RCCGGY	1 cut(s)	1026
BsrI	ACTGG	3 cut(s)	291, 1014, 1324
BssAI	RCCGGY	1 cut(s)	1026
BssECI	CCNNGG	4 cut(s)	277, 399, 909, 1089
BssMI	GATC	2 cut(s)	1165, 1412
BssT1I	CCWWGG	2 cut(s)	909, 1089
Bst2UI	CCWGG	2 cut(s)	262, 826
Bst4CI	ACNGT	1 cut(s)	1085
Bst6I	CTCTTC	3 cut(s)	715, 1139, 1373
BstC8I	GCNNGC	6 cut(s)	423, 586, 691, 1151, 1198, 1493
BstDEI	CTNAG	5 cut(s)	80, 407, 894, 1102, 1190
BstDSI	CCRYGG	1 cut(s)	1089
BstEII	GGTNACC	1 cut(s)	577
BstF5I	GGATG	8 cut(s)	273, 609, 613, 639, 1021, 1329, 1377, 1416
BstFNI	CGCG	4 cut(s)	287, 342, 392, 572
BstH2I	RGCGCY	2 cut(s)	407, 920
BstHHI	GCGC	5 cut(s)	188, 392, 406, 784, 919
BstKTI	GATC	2 cut(s)	1168, 1415
BstMAI	GTCTC	4 cut(s)	55, 74, 144, 656
BstMBI	GATC	2 cut(s)	1165, 1412
BstMWI	GCNNNNNNNGC	2 cut(s)	317, 914
BstNI	CCWGG	2 cut(s)	262, 826
BstNSI	RCATGY	4 cut(s)	796, 1153, 1200, 1516
BstPI	GGTNACC	1 cut(s)	577
BstSCI	CCNGG	3 cut(s)	260, 399, 824
BstUI	CGCG	4 cut(s)	287, 342, 392, 572
BstV1I	GCAGC	2 cut(s)	374, 1349
BstV2I	GAAGAC	1 cut(s)	939
BstX2I	RGATCY	1 cut(s)	1412
BstYI	RGATCY	1 cut(s)	1412
BsuI	GTATCC	1 cut(s)	1016
BsuRI	GGCC	5 cut(s)	141, 320, 398, 888, 1116
BtgI	CCRYGG	1 cut(s)	1089
BtgZI	GCGATG	2 cut(s)	407, 890
BtsCI	GGATG	8 cut(s)	273, 609, 613, 639, 1021, 1329, 1377, 1416
BtsIMutI	CAGTG	2 cut(s)	298, 1198
Cac8I	GCNNGC	6 cut(s)	423, 586, 691, 1151, 1198, 1493
CaiI	CAGNNNCTG	1 cut(s)	87
CciI	TCATGA	3 cut(s)	1036, 1140, 1207
CfoI	GCGC	5 cut(s)	188, 392, 406, 784, 919
Cfr10I	RCCGGY	1 cut(s)	1026
Cfr13I	GGNCC	2 cut(s)	397, 982
CseI	GACGC	1 cut(s)	276
Csp6I	GTAC	5 cut(s)	466, 777, 1030, 1076, 1203
CspAI	ACCGGT	1 cut(s)	1026
CviQI	GTAC	5 cut(s)	466, 777, 1030, 1076, 1203
DdeI	CTNAG	5 cut(s)	80, 407, 894, 1102, 1190
DpnI	GATC	2 cut(s)	1167, 1414
DpnII	GATC	2 cut(s)	1165, 1412
EaeI	YGGCCR	1 cut(s)	1114
Eam1104I	CTCTTC	3 cut(s)	715, 1139, 1373
EarI	CTCTTC	3 cut(s)	715, 1139, 1373
EciI	GGCGGA	3 cut(s)	221, 232, 326
Eco130I	CCWWGG	2 cut(s)	909, 1089
Eco147I	AGGCCT	1 cut(s)	888
Eco31I	GGTCTC	1 cut(s)	144
Eco32I	GATATC	2 cut(s)	1099, 1465
Eco47I	GGWCC	1 cut(s)	982
Eco47III	AGCGCT	1 cut(s)	918
Eco57I	CTGAAG	2 cut(s)	962, 1142
Eco88I	CYCGRG	1 cut(s)	977
Eco91I	GGTNACC	1 cut(s)	577
EcoO109I	RGGNCCY	1 cut(s)	982
EcoO65I	GGTNACC	1 cut(s)	577
EcoRII	CCWGG	2 cut(s)	260, 824
EcoRV	GATATC	2 cut(s)	1099, 1465
EcoT14I	CCWWGG	2 cut(s)	909, 1089
ErhI	CCWWGG	2 cut(s)	909, 1089
Esp3I	CGTCTC	1 cut(s)	55
FaqI	GGGAC	1 cut(s)	1343
FauI	CCCGC	1 cut(s)	205
Fnu4HI	GCNGC	4 cut(s)	251, 340, 388, 1338
FokI	GGATG	8 cut(s)	260, 616, 620, 646, 1028, 1336, 1384, 1403
Fsp4HI	GCNGC	4 cut(s)	251, 340, 388, 1338
FspBI	CTAG	6 cut(s)	348, 884, 890, 1226, 1440, 1478
GlaI	GCGC	5 cut(s)	187, 391, 405, 783, 918
GluI	GCNGC	4 cut(s)	251, 340, 388, 1338
GsaI	CCCAGC	2 cut(s)	172, 776
HaeII	RGCGCY	2 cut(s)	407, 920
HaeIII	GGCC	5 cut(s)	141, 320, 398, 888, 1116
HapII	CCGG	4 cut(s)	138, 401, 656, 1027
HgaI	GACGC	1 cut(s)	276
HhaI	GCGC	5 cut(s)	188, 392, 406, 784, 919
Hin6I	GCGC	5 cut(s)	186, 390, 404, 782, 917
HinP1I	GCGC	5 cut(s)	186, 390, 404, 782, 917
HincII	GTYRAC	1 cut(s)	1510
HindII	GTYRAC	1 cut(s)	1510
HinfI	GANTC	2 cut(s)	296, 880
HpaII	CCGG	4 cut(s)	138, 401, 656, 1027
HphI	GGTGA	4 cut(s)	157, 202, 589, 961
Hpy166II	GTNNAC	4 cut(s)	466, 790, 864, 1510
Hpy188I	TCNGA	5 cut(s)	278, 547, 697, 1122, 1453
Hpy188III	TCNNGA	3 cut(s)	1037, 1141, 1208
Hpy8I	GTNNAC	4 cut(s)	466, 790, 864, 1510
Hpy99I	CGWCG	1 cut(s)	259
HpyAV	CCTTC	6 cut(s)	106, 115, 386, 407, 1117, 1345
HpyCH4III	ACNGT	1 cut(s)	1085
HpyCH4IV	ACGT	2 cut(s)	468, 1050
HpyCH4V	TGCA	6 cut(s)	504, 521, 1179, 1196, 1200, 1495
HpyF10VI	GCNNNNNNNGC	2 cut(s)	317, 914
HpyF3I	CTNAG	5 cut(s)	80, 407, 894, 1102, 1190
HpySE526I	ACGT	2 cut(s)	468, 1050
HspAI	GCGC	5 cut(s)	186, 390, 404, 782, 917
Kzo9I	GATC	2 cut(s)	1165, 1412
LguI	GCTCTTC	1 cut(s)	1139
LmnI	GCTCC	3 cut(s)	339, 698, 1267
Lsp1109I	GCAGC	2 cut(s)	374, 1349
LweI	GCATC	3 cut(s)	508, 927, 1464
MaeI	CTAG	6 cut(s)	348, 884, 890, 1226, 1440, 1478
MaeII	ACGT	2 cut(s)	468, 1050
MaeIII	GTNAC	3 cut(s)	293, 577, 967
MalI	GATC	2 cut(s)	1167, 1414
MboI	GATC	2 cut(s)	1165, 1412
MboII	GAAGA	5 cut(s)	732, 939, 1156, 1387, 1390
MflI	RGATCY	1 cut(s)	1412
MhlI	GDGCHC	1 cut(s)	695
MluI	ACGCGT	1 cut(s)	285
MlyI	GAGTC	1 cut(s)	290
MseI	TTAA	1 cut(s)	1215
MslI	CAYNNNNRTG	5 cut(s)	432, 492, 735, 1053, 1083
MspA1I	CMGCKG	1 cut(s)	772
MspI	CCGG	4 cut(s)	138, 401, 656, 1027
MspR9I	CCNGG	3 cut(s)	262, 401, 826
Mva1269I	GAATGC	2 cut(s)	311, 691
MvaI	CCWGG	2 cut(s)	262, 826
MvnI	CGCG	4 cut(s)	287, 342, 392, 572
MwoI	GCNNNNNNNGC	2 cut(s)	317, 914
NciI	CCSGG	1 cut(s)	401
NcoI	CCATGG	1 cut(s)	1089
NdeII	GATC	2 cut(s)	1165, 1412
NlaIV	GGNNCC	5 cut(s)	399, 983, 1087, 1269, 1414
NmeAIII	GCCGAG	1 cut(s)	1296
NmuCI	GTSAC	3 cut(s)	293, 577, 967
NspI	RCATGY	4 cut(s)	796, 1153, 1200, 1516
PaeI	GCATGC	2 cut(s)	1153, 1200
PagI	TCATGA	3 cut(s)	1036, 1140, 1207
PceI	AGGCCT	1 cut(s)	888
PciI	ACATGT	2 cut(s)	792, 1512
PciSI	GCTCTTC	1 cut(s)	1139
PcsI	WCGNNNNNNNCGW	2 cut(s)	254, 956
PctI	GAATGC	2 cut(s)	311, 691
PfeI	GAWTC	1 cut(s)	880
PfoI	TCCNGGA	1 cut(s)	260
PinAI	ACCGGT	1 cut(s)	1026
PkrI	GCNGC	4 cut(s)	252, 341, 389, 1339
PleI	GAGTC	1 cut(s)	290
PpsI	GAGTC	1 cut(s)	290
PpuMI	RGGWCCY	1 cut(s)	982
PscI	ACATGT	2 cut(s)	792, 1512
Psp5II	RGGWCCY	1 cut(s)	982
Psp6I	CCWGG	2 cut(s)	260, 824
PspEI	GGTNACC	1 cut(s)	577
PspFI	CCCAGC	2 cut(s)	168, 772
PspGI	CCWGG	2 cut(s)	260, 824
PspN4I	GGNNCC	5 cut(s)	399, 983, 1087, 1269, 1414
PspPI	GGNCC	2 cut(s)	397, 982
PspPPI	RGGWCCY	1 cut(s)	982
PstNI	CAGNNNCTG	1 cut(s)	87
PsuI	RGATCY	1 cut(s)	1412
PvuII	CAGCTG	1 cut(s)	772
RsaI	GTAC	5 cut(s)	467, 778, 1031, 1077, 1204
RsaNI	GTAC	5 cut(s)	466, 777, 1030, 1076, 1203
RseI	CAYNNNNRTG	5 cut(s)	432, 492, 735, 1053, 1083
SapI	GCTCTTC	1 cut(s)	1139
SaqAI	TTAA	1 cut(s)	1215
SatI	GCNGC	4 cut(s)	251, 340, 388, 1338
Sau3AI	GATC	2 cut(s)	1165, 1412
Sau96I	GGNCC	2 cut(s)	397, 982
ScaI	AGTACT	1 cut(s)	1204
SchI	GAGTC	1 cut(s)	290
ScrFI	CCNGG	3 cut(s)	262, 401, 826
SduI	GDGCHC	1 cut(s)	695
SfaNI	GCATC	3 cut(s)	508, 927, 1464
SinI	GGWCC	1 cut(s)	982
SmiMI	CAYNNNNRTG	5 cut(s)	432, 492, 735, 1053, 1083
SmlI	CTYRAG	2 cut(s)	380, 920
SmoI	CTYRAG	2 cut(s)	380, 920
SphI	GCATGC	2 cut(s)	1153, 1200
SseBI	AGGCCT	1 cut(s)	888
SspMI	CTAG	6 cut(s)	348, 884, 890, 1226, 1440, 1478
StuI	AGGCCT	1 cut(s)	888
StyD4I	CCNGG	3 cut(s)	260, 399, 824
StyI	CCWWGG	2 cut(s)	909, 1089
TaaI	ACNGT	1 cut(s)	1085
TaiI	ACGT	2 cut(s)	471, 1053
TaqI	TCGA	1 cut(s)	950
TatI	WGTACW	1 cut(s)	1202
TauI	GCSGC	2 cut(s)	253, 342
TfiI	GAWTC	1 cut(s)	880
Tru1I	TTAA	1 cut(s)	1215
Tru9I	TTAA	1 cut(s)	1215
TscAI	CASTG	2 cut(s)	298, 1198
TseFI	GTSAC	3 cut(s)	293, 577, 967
TseI	GCWGC	2 cut(s)	387, 1337
Tsp45I	GTSAC	3 cut(s)	293, 577, 967
TspDTI	ATGAA	8 cut(s)	476, 719, 1025, 1129, 1157, 1373, 1388, 1514
TspGWI	ACGGA	1 cut(s)	1384
TspRI	CASTG	2 cut(s)	298, 1198
VpaK11BI	GGWCC	1 cut(s)	982
XapI	RAATTY	3 cut(s)	179, 1285, 1303
XceI	RCATGY	4 cut(s)	796, 1153, 1200, 1516
XspI	CTAG	6 cut(s)	348, 884, 890, 1226, 1440, 1478
ZrmI	AGTACT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.