Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0004576

Physical Location & Seq

Genomic Coordinates Reverse (-)

28199128 .. 28200645

Gene Structure 1518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1130700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGTTCGGCTTCCAATCCCAACCGCCAATAACTGTAATTCAAACTTTGGCTCCAAAAAGCAGCAATGTCTCCACCTCCTCAGCCTCTGCTCAACCTTCAAACACCTCTCTCAGATCCACGCCCAAATCCAAGTCTCCGGCTTTCGAAAAGACCACTTTCTCCTCACCCAGCTCGTCCGCTTCTGCGCCCTCTCTCCCGCCAAAAACTTCGCCTACGCCCGAACCCTCCTCCGCCACTCTGAGTCCTCACCGCCGTCGTCATGGAACTTCCTCATCCGTGGCTATGCCCCCAGCGACTCCCCCCGAGAGGCCATCTGGGTCTTTCGCGTGATGCTCCACAGCGGTGTTCGACCCAATCTGCTGACGTTCCCTTTCCTGATCAAGTGCTGCGCTTCGGCCGCTGCACTGAAAGAAGGGAAGCAAGTGCATGTGGGAGTTGTGAAGTGTGGGTTGGACTGTGATGTGTATGTTCAGAACAATCTGGTTCATTTTTATGGTGAGTGTAAGAAAATTAAGGATGCGCGGAAAGTGTTTGATGAAATGTTTGAGAGAAGTGTTGTTTCGTGGAATGCGGTTATAACCGCTTGCATTGAGAATTTCTGGTTCAACGAGGGGATTGAATACTTTGTGAAGATGAGGGATTGTGGGTTTGAGCCGGATGAGACTACGATGGTGGTTGTGTTGAACGCATCCTCAGAGCTTGGGAACTTGAGCATTGGGAGATGGGTTCATTCCCAAGTAATTGTAAGAGGGTTGGCTTTGAATTGTCAGTTGGGTACTGCACTTGTGGACATGTATGCAAAGTCTGGGGCTTTGGGTTATGCTAGGATAGTTTTCGATAAGATGGAGACGCGGAATGTGTGGACGTGGAGTGCCATGATTGTAGGGTTAGCACAGCATGGGTTTGCCAAGGAAGCCCTTGAACTTTTCCCGAAGATGCTGAGCTCACCAATAAACCCGAATTACGTCACCTTTCTTGGGGTTCTCTGTGCTTGTAGCCATGCTGGACTGGTGGAGGATGGGTACCGATTCTTTAATGATATGGAACACGTACATGGGATTACACCCATGATGGTGCACTATGGTGCCATGGTGGATATCTTAGGTCGTGCTGGCCGTCTCAACGAGGCTTATAGCTTCATGATGAGCATGCCCCTTGACCCCGATCCCGTTATATGGAGAACATTGCTTAGTGCATGCACTACTCATAGTGCCAAGGATAACAAAGGGGTAGGAAACAAAGTAAGAGAGAAGTTGCTTGAACTGGAGCCAAAGAGGGGTGGGAATCTTGTGATGGCCGCGAACATGTTTGCCGAAGTTGGGATGTGGGACAAAGCCGCAAATTTGAGGATGGTTATGAAAGAAAGACAAATGAAGAAGATGGCGGGGGAGAGTTGCGTTGAGTTAGGCGGGTCTATCCATAAGTTCTTTTCTGGCTTTGATTCCCAAGCTGATTATGAGGATGTCTACCAGATACTAGATGTATTGAGCTTGCACATGAAGTTGGTTAACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

506

Amino Acids

56.69

Weight (kDa)

8.49

Isoelectric Point (pI)

37.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	87 - 131	8.2e-07	PPR repeat family
PPR_2	PF13041	185 - 230	1.8e-06	PPR repeat family
PPR_2	PF13041	286 - 333	9e-06	PPR repeat family
E_motif	PF20431	408 - 468	3.2e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36730
fragaria_vesca	FvH4_6g48480
malus_domestica	MD00G1130700.v1.1 MD09G1051700.v1.1
prunus_persica	Prupe.3G267000_v2.0.a1
pyrus_communis	pycom111g04300 pycom17g04660 pycom17g04690
rosa_chinensis	RchiOBHm_Chr2g0168371 RchiOBHm_Chr5g0064681 RchiOBHm_Chr5g0064691
rosa_laevigata	RLG00000004634 RLG00000011887 RLG00000021772 RLG00000024779 RLG00000034413
rosa_multiflora	Rmu_sc0000524.1_g000031 Rmu_sc0003354.1_g000021 Rmu_sc0039228.1_g000001 Rmu_ssc0000002.1_g000001
rosa_roxburghii	Rroxscaffold_2G00113250
rosa_rugosa	Rorug02G0533700
rosa_samantha	Rh1AG067000 Rh2BG616000 Rh2CG583800 Rh2DG626100 Rh4BG210500 Rh5AG077100
rosa_wichuraiana	Rw5G007110 Rw5G029530 Rw6G007180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	578
Acc65I	GGTACC	1 cut(s)	1023
AccB1I	GGYRCC	2 cut(s)	1023, 1085
AccI	GTMKAC	1 cut(s)	1467
AccII	CGCG	4 cut(s)	327, 523, 853, 1301
AclWI	GGATC	2 cut(s)	109, 1160
AcoI	YGGCCR	3 cut(s)	396, 1114, 1296
AcsI	RAATTY	2 cut(s)	595, 1342
AfaI	GTAC	3 cut(s)	778, 1025, 1053
AfiI	CCNNNNNNNGG	5 cut(s)	307, 978, 1176, 1277, 1320
AflIII	ACRYGT	4 cut(s)	792, 1048, 1305, 1512
AgsI	TTSAA	8 cut(s)	42, 100, 607, 620, 685, 763, 923, 1262
AjiI	CACGTC	1 cut(s)	867
AjuI	GAANNNNNNNTTGG	4 cut(s)	434, 466, 755, 787
AleI	CACNNNNGTG	2 cut(s)	342, 1083
AluBI	AGCT	6 cut(s)	172, 700, 945, 1137, 1451, 1491
AluI	AGCT	6 cut(s)	172, 700, 945, 1137, 1451, 1491
Alw21I	GWGCWC	2 cut(s)	947, 1080
Alw26I	GTCTC	5 cut(s)	74, 139, 656, 842, 1124
Alw44I	GTGCAC	1 cut(s)	1076
AlwI	GGATC	2 cut(s)	109, 1160
AlwNI	CAGNNNCTG	1 cut(s)	87
Ama87I	CYCGRG	1 cut(s)	303
AoxI	GGCC	4 cut(s)	309, 396, 1114, 1296
ApaLI	GTGCAC	1 cut(s)	1076
ApeKI	GCWGC	3 cut(s)	61, 387, 401
ApoI	RAATTY	2 cut(s)	595, 1342
Asp718I	GGTACC	1 cut(s)	1023
AspLEI	GCGC	3 cut(s)	188, 392, 523
AsuHPI	GGTGA	5 cut(s)	157, 240, 509, 939, 961
AsuII	TTCGAA	1 cut(s)	145
AvaI	CYCGRG	1 cut(s)	303
BaeGI	GKGCMC	1 cut(s)	1080
BanI	GGYRCC	2 cut(s)	1023, 1085
BanII	GRGCYC	1 cut(s)	947
Bbv12I	GWGCWC	2 cut(s)	947, 1080
BbvCI	CCTCAGC	1 cut(s)	80
BbvI	GCAGC	3 cut(s)	73, 374, 388
BccI	CCATC	9 cut(s)	320, 664, 717, 838, 1013, 1066, 1288, 1345, 1375
BceAI	ACGGC	2 cut(s)	238, 1101
BclI	TGATCA	1 cut(s)	378
BcoDI	GTCTC	5 cut(s)	74, 139, 656, 842, 1124
BfaI	CTAG	2 cut(s)	825, 1478
BisI	GCNGC	6 cut(s)	62, 388, 399, 402, 1299, 1338
BlpI	GCTNAGC	1 cut(s)	941
BlsI	GCNGC	6 cut(s)	63, 389, 400, 403, 1300, 1339
BmeT110I	CYCGRG	1 cut(s)	303
BmgBI	CACGTC	1 cut(s)	867
BmiI	GGNNCC	4 cut(s)	52, 1025, 1087, 1269
BmsI	GCATC	4 cut(s)	321, 508, 698, 927
BpmI	CTGGAG	1 cut(s)	1286
Bpu10I	CCTNAGC	1 cut(s)	80
Bpu1102I	GCTNAGC	1 cut(s)	941
Bpu14I	TTCGAA	1 cut(s)	145
BpuEI	CTTGAG	1 cut(s)	730
BsaAI	YACGTR	1 cut(s)	1051
BsaJI	CCNNGG	4 cut(s)	277, 909, 1089, 1215
BsaXI	ACNNNNNCTCC	4 cut(s)	35, 65, 1007, 1037
Bsc4I	CCNNNNNNNGG	5 cut(s)	307, 978, 1176, 1277, 1320
Bse1I	ACTGG	2 cut(s)	1014, 1269
Bse3DI	GCAATG	2 cut(s)	71, 1184
BseDI	CCNNGG	4 cut(s)	277, 909, 1089, 1215
BseGI	GGATG	8 cut(s)	273, 523, 664, 689, 1024, 1329, 1356, 1468
BseLI	CCNNNNNNNGG	5 cut(s)	307, 978, 1176, 1277, 1320
BseMI	GCAATG	2 cut(s)	71, 1184
BseMII	CTCAG	5 cut(s)	94, 125, 231, 708, 932
BseNI	ACTGG	2 cut(s)	1014, 1269
BseRI	GAGGAG	3 cut(s)	68, 152, 218
BseSI	GKGCMC	1 cut(s)	1080
BseX3I	CGGCCG	1 cut(s)	396
BseXI	GCAGC	3 cut(s)	73, 374, 388
BseYI	CCCAGC	2 cut(s)	168, 290
BsgI	GTGCAG	2 cut(s)	387, 765
Bsh1236I	CGCG	4 cut(s)	327, 523, 853, 1301
Bsh1285I	CGRYCG	1 cut(s)	399
BshFI	GGCC	4 cut(s)	311, 398, 1116, 1298
BshNI	GGYRCC	2 cut(s)	1023, 1085
BsiEI	CGRYCG	1 cut(s)	399
BsiHKAI	GWGCWC	2 cut(s)	947, 1080
BsiHKCI	CYCGRG	1 cut(s)	303
BsiSI	CCGG	2 cut(s)	138, 656
BslFI	GGGAC	1 cut(s)	1343
BslI	CCNNNNNNNGG	5 cut(s)	307, 978, 1176, 1277, 1320
BsmAI	GTCTC	5 cut(s)	74, 139, 656, 842, 1124
BsmBI	CGTCTC	2 cut(s)	842, 1124
BsmFI	GGGAC	1 cut(s)	1343
BsmI	GAATGC	1 cut(s)	574
BsnI	GGCC	4 cut(s)	311, 398, 1116, 1298
BsoBI	CYCGRG	1 cut(s)	303
Bsp119I	TTCGAA	1 cut(s)	145
Bsp1286I	GDGCHC	2 cut(s)	947, 1080
Bsp143I	GATC	3 cut(s)	114, 378, 1165
Bsp1720I	GCTNAGC	1 cut(s)	941
Bsp19I	CCATGG	1 cut(s)	1089
BspANI	GGCC	4 cut(s)	311, 398, 1116, 1298
BspCNI	CTCAG	5 cut(s)	93, 124, 232, 707, 933
BspFNI	CGCG	4 cut(s)	327, 523, 853, 1301
BspHI	TCATGA	1 cut(s)	1140
BspLI	GGNNCC	4 cut(s)	52, 1025, 1087, 1269
BspPI	GGATC	2 cut(s)	109, 1160
BspT104I	TTCGAA	1 cut(s)	145
BspT107I	GGYRCC	2 cut(s)	1023, 1085
BsrDI	GCAATG	2 cut(s)	71, 1184
BsrI	ACTGG	2 cut(s)	1014, 1269
BssECI	CCNNGG	4 cut(s)	277, 909, 1089, 1215
BssMI	GATC	3 cut(s)	114, 378, 1165
BssT1I	CCWWGG	3 cut(s)	909, 1089, 1215
Bst4CI	ACNGT	2 cut(s)	35, 458
BstBAI	YACGTR	1 cut(s)	1051
BstBI	TTCGAA	1 cut(s)	145
BstC8I	GCNNGC	5 cut(s)	586, 1114, 1151, 1198, 1493
BstDEI	CTNAG	7 cut(s)	80, 111, 240, 694, 941, 1102, 1190
BstDSI	CCRYGG	2 cut(s)	277, 1089
BstF5I	GGATG	8 cut(s)	273, 523, 664, 689, 1024, 1329, 1356, 1468
BstFNI	CGCG	4 cut(s)	327, 523, 853, 1301
BstHHI	GCGC	3 cut(s)	188, 392, 523
BstKTI	GATC	3 cut(s)	117, 381, 1168
BstMAI	GTCTC	5 cut(s)	74, 139, 656, 842, 1124
BstMBI	GATC	3 cut(s)	114, 378, 1165
BstMCI	CGRYCG	1 cut(s)	399
BstMWI	GCNNNNNNNGC	2 cut(s)	398, 914
BstNSI	RCATGY	6 cut(s)	431, 796, 1153, 1200, 1309, 1516
BstSLI	GKGCMC	1 cut(s)	1080
BstUI	CGCG	4 cut(s)	327, 523, 853, 1301
BstV1I	GCAGC	3 cut(s)	73, 374, 388
BstX2I	RGATCY	1 cut(s)	114
BstYI	RGATCY	1 cut(s)	114
BstZI	CGGCCG	1 cut(s)	396
BsuRI	GGCC	4 cut(s)	311, 398, 1116, 1298
BtgI	CCRYGG	2 cut(s)	277, 1089
BtrI	CACGTC	1 cut(s)	867
BtsCI	GGATG	8 cut(s)	273, 523, 664, 689, 1024, 1329, 1356, 1468
BtsIMutI	CAGTG	1 cut(s)	404
Cac8I	GCNNGC	5 cut(s)	586, 1114, 1151, 1198, 1493
CaiI	CAGNNNCTG	1 cut(s)	87
CciI	TCATGA	1 cut(s)	1140
CfoI	GCGC	3 cut(s)	188, 392, 523
CseI	GACGC	1 cut(s)	859
Csp6I	GTAC	3 cut(s)	777, 1024, 1052
CviQI	GTAC	3 cut(s)	777, 1024, 1052
DdeI	CTNAG	7 cut(s)	80, 111, 240, 694, 941, 1102, 1190
DpnI	GATC	3 cut(s)	116, 380, 1167
DpnII	GATC	3 cut(s)	114, 378, 1165
EaeI	YGGCCR	3 cut(s)	396, 1114, 1296
EagI	CGGCCG	1 cut(s)	396
EciI	GGCGGA	1 cut(s)	221
Ecl136II	GAGCTC	1 cut(s)	945
EclXI	CGGCCG	1 cut(s)	396
Eco130I	CCWWGG	3 cut(s)	909, 1089, 1215
Eco24I	GRGCYC	1 cut(s)	947
Eco32I	GATATC	1 cut(s)	1099
Eco52I	CGGCCG	1 cut(s)	396
Eco53kI	GAGCTC	1 cut(s)	945
Eco88I	CYCGRG	1 cut(s)	303
EcoICRI	GAGCTC	1 cut(s)	945
EcoRV	GATATC	1 cut(s)	1099
EcoT14I	CCWWGG	3 cut(s)	909, 1089, 1215
EcoT38I	GRGCYC	1 cut(s)	947
ErhI	CCWWGG	3 cut(s)	909, 1089, 1215
Esp3I	CGTCTC	2 cut(s)	842, 1124
FaqI	GGGAC	1 cut(s)	1343
FauI	CCCGC	3 cut(s)	205, 1378, 1403
FbaI	TGATCA	1 cut(s)	378
FblI	GTMKAC	1 cut(s)	1467
Fnu4HI	GCNGC	6 cut(s)	62, 388, 399, 402, 1299, 1338
FokI	GGATG	8 cut(s)	260, 530, 671, 676, 1031, 1336, 1363, 1475
FriOI	GRGCYC	1 cut(s)	947
Fsp4HI	GCNGC	6 cut(s)	62, 388, 399, 402, 1299, 1338
FspBI	CTAG	2 cut(s)	825, 1478
GlaI	GCGC	3 cut(s)	187, 391, 522
GluI	GCNGC	6 cut(s)	62, 388, 399, 402, 1299, 1338
GsaI	CCCAGC	2 cut(s)	172, 294
GsuI	CTGGAG	1 cut(s)	1286
HaeIII	GGCC	4 cut(s)	311, 398, 1116, 1298
HapII	CCGG	2 cut(s)	138, 656
HgaI	GACGC	1 cut(s)	859
HhaI	GCGC	3 cut(s)	188, 392, 523
Hin6I	GCGC	3 cut(s)	186, 390, 521
HinP1I	GCGC	3 cut(s)	186, 390, 521
HincII	GTYRAC	1 cut(s)	1510
HindII	GTYRAC	1 cut(s)	1510
HinfI	GANTC	5 cut(s)	242, 296, 1029, 1285, 1442
HpaI	GTTAAC	1 cut(s)	1510
HpaII	CCGG	2 cut(s)	138, 656
HphI	GGTGA	5 cut(s)	157, 240, 509, 939, 961
Hpy166II	GTNNAC	5 cut(s)	790, 864, 1078, 1468, 1510
Hpy188I	TCNGA	4 cut(s)	114, 241, 474, 697
Hpy188III	TCNNGA	3 cut(s)	376, 931, 1141
Hpy8I	GTNNAC	5 cut(s)	790, 864, 1078, 1468, 1510
Hpy99I	CGWCG	1 cut(s)	259
HpyAV	CCTTC	2 cut(s)	106, 407
HpyCH4III	ACNGT	2 cut(s)	35, 458
HpyCH4IV	ACGT	4 cut(s)	365, 866, 966, 1050
HpyCH4V	TGCA	9 cut(s)	404, 427, 588, 782, 800, 1078, 1196, 1200, 1495
HpyF10VI	GCNNNNNNNGC	2 cut(s)	398, 914
HpyF3I	CTNAG	7 cut(s)	80, 111, 240, 694, 941, 1102, 1190
HpySE526I	ACGT	4 cut(s)	365, 866, 966, 1050
HspAI	GCGC	3 cut(s)	186, 390, 521
KpnI	GGTACC	1 cut(s)	1027
Ksp22I	TGATCA	1 cut(s)	378
KspAI	GTTAAC	1 cut(s)	1510
Kzo9I	GATC	3 cut(s)	114, 378, 1165
LmnI	GCTCC	3 cut(s)	56, 339, 1267
Lsp1109I	GCAGC	3 cut(s)	73, 374, 388
LweI	GCATC	4 cut(s)	321, 508, 698, 927
MaeI	CTAG	2 cut(s)	825, 1478
MaeII	ACGT	4 cut(s)	365, 866, 966, 1050
MaeIII	GTNAC	1 cut(s)	967
MalI	GATC	3 cut(s)	116, 380, 1167
MboI	GATC	3 cut(s)	114, 378, 1165
MboII	GAAGA	4 cut(s)	643, 946, 1387, 1390
MflI	RGATCY	1 cut(s)	114
MhlI	GDGCHC	2 cut(s)	947, 1080
MluCI	AATT	7 cut(s)	37, 510, 595, 741, 763, 961, 1342
MlyI	GAGTC	2 cut(s)	251, 290
MmeI	TCCRAC	1 cut(s)	432
MseI	TTAA	3 cut(s)	513, 1035, 1509
MslI	CAYNNNNRTG	5 cut(s)	342, 492, 1053, 1073, 1083
MspA1I	CMGCKG	2 cut(s)	342, 401
MspI	CCGG	2 cut(s)	138, 656
Mva1269I	GAATGC	1 cut(s)	574
MvnI	CGCG	4 cut(s)	327, 523, 853, 1301
MwoI	GCNNNNNNNGC	2 cut(s)	398, 914
NcoI	CCATGG	1 cut(s)	1089
NdeII	GATC	3 cut(s)	114, 378, 1165
NlaIV	GGNNCC	4 cut(s)	52, 1025, 1087, 1269
NmuCI	GTSAC	1 cut(s)	967
NspI	RCATGY	6 cut(s)	431, 796, 1153, 1200, 1309, 1516
NspV	TTCGAA	1 cut(s)	145
OliI	CACNNNNGTG	2 cut(s)	342, 1083
PaeI	GCATGC	2 cut(s)	1153, 1200
PagI	TCATGA	1 cut(s)	1140
PciI	ACATGT	3 cut(s)	792, 1305, 1512
PcsI	WCGNNNNNNNCGW	1 cut(s)	1114
PctI	GAATGC	1 cut(s)	574
PfeI	GAWTC	3 cut(s)	1029, 1285, 1442
PkrI	GCNGC	6 cut(s)	63, 389, 400, 403, 1300, 1339
PleI	GAGTC	2 cut(s)	250, 290
PpsI	GAGTC	2 cut(s)	250, 290
Ppu21I	YACGTR	1 cut(s)	1051
PscI	ACATGT	3 cut(s)	792, 1305, 1512
PsiI	TTATAA	1 cut(s)	578
Psp124BI	GAGCTC	1 cut(s)	947
PspFI	CCCAGC	2 cut(s)	168, 290
PspN4I	GGNNCC	4 cut(s)	52, 1025, 1087, 1269
PstNI	CAGNNNCTG	1 cut(s)	87
PsuI	RGATCY	1 cut(s)	114
RsaI	GTAC	3 cut(s)	778, 1025, 1053
RsaNI	GTAC	3 cut(s)	777, 1024, 1052
RseI	CAYNNNNRTG	5 cut(s)	342, 492, 1053, 1073, 1083
SacI	GAGCTC	1 cut(s)	947
SaqAI	TTAA	3 cut(s)	513, 1035, 1509
SatI	GCNGC	6 cut(s)	62, 388, 399, 402, 1299, 1338
Sau3AI	GATC	3 cut(s)	114, 378, 1165
SchI	GAGTC	2 cut(s)	251, 290
SduI	GDGCHC	2 cut(s)	947, 1080
SfaNI	GCATC	4 cut(s)	321, 508, 698, 927
SfuI	TTCGAA	1 cut(s)	145
SmiMI	CAYNNNNRTG	5 cut(s)	342, 492, 1053, 1073, 1083
SmlI	CTYRAG	1 cut(s)	709
SmoI	CTYRAG	1 cut(s)	709
SphI	GCATGC	2 cut(s)	1153, 1200
Sse9I	AATT	7 cut(s)	37, 510, 595, 741, 763, 961, 1342
SspMI	CTAG	2 cut(s)	825, 1478
SstI	GAGCTC	1 cut(s)	947
StyI	CCWWGG	3 cut(s)	909, 1089, 1215
TaaI	ACNGT	2 cut(s)	35, 458
TaiI	ACGT	4 cut(s)	368, 869, 969, 1053
TaqI	TCGA	3 cut(s)	145, 349, 837
TasI	AATT	7 cut(s)	37, 510, 595, 741, 763, 961, 1342
TauI	GCSGC	3 cut(s)	401, 1301, 1340
TfiI	GAWTC	3 cut(s)	1029, 1285, 1442
Tru1I	TTAA	3 cut(s)	513, 1035, 1509
Tru9I	TTAA	3 cut(s)	513, 1035, 1509
TscAI	CASTG	1 cut(s)	411
TseFI	GTSAC	1 cut(s)	967
TseI	GCWGC	3 cut(s)	61, 387, 401
Tsp45I	GTSAC	1 cut(s)	967
TspDTI	ATGAA	7 cut(s)	476, 552, 719, 1129, 1373, 1388, 1514
TspGWI	ACGGA	1 cut(s)	266
TspRI	CASTG	1 cut(s)	411
VneI	GTGCAC	1 cut(s)	1076
XapI	RAATTY	2 cut(s)	595, 1342
XceI	RCATGY	6 cut(s)	431, 796, 1153, 1200, 1309, 1516
XmiI	GTMKAC	1 cut(s)	1467
XspI	CTAG	2 cut(s)	825, 1478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.