methyl-CpG-binding domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01460 |
| fragaria_vesca | FvH4_6g50560 FvH4_6g50560 FvH4_6g50560 FvH4_6g50560 FvH4_6g50560 FvH4_6g50560 |
| malus_domestica | MD09G1035200.v1.1 MD17G1035500.v1.1 |
| prunus_persica | Prupe.3G283100_v2.0.a1 |
| pyrus_communis | pycom111g02810 pycom17g03270 |
| rosa_chinensis | RchiOBHm_Chr2g0171081 |
| rosa_laevigata | RLG00000022001 |
| rosa_multiflora | Rmu_co8292709.1_g000001 Rmu_co8327183.1_g000001 Rmu_co8396081.1_g000001 Rmu_sc0003517.1_g000017 Rmu_sc0004565.1_g000010 Rmu_sc0007623.1_g000002 Rmu_sc0030067.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00080830 |
| rosa_rugosa | Rorug02G0553500 Rorug02G0553600 |
| rosa_samantha | Rh2AG627100 Rh2BG637000 Rh2CG605900 Rh2DG648600 Rh2DG654100 |
| rosa_wichuraiana | Rw2G051900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 320 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 356, 3473 |
| Acc16I | TGCGCA | 1 cut(s) | 4982 |
| Acc36I | ACCTGC | 2 cut(s) | 320, 4449 |
| AccB1I | GGYRCC | 2 cut(s) | 2066, 5954 |
| AccBSI | CCGCTC | 2 cut(s) | 295, 406 |
| AccI | GTMKAC | 3 cut(s) | 1531, 1942, 3285 |
| AccIII | TCCGGA | 1 cut(s) | 1120 |
| AcoI | YGGCCR | 4 cut(s) | 201, 328, 401, 2837 |
| AcvI | CACGTG | 2 cut(s) | 271, 4571 |
| AcyI | GRCGYC | 2 cut(s) | 384, 4072 |
| AdeI | CACNNNGTG | 2 cut(s) | 274, 817 |
| AfeI | AGCGCT | 1 cut(s) | 398 |
| AflIII | ACRYGT | 1 cut(s) | 268 |
| AjiI | CACGTC | 2 cut(s) | 154, 478 |
| AjnI | CCWGG | 7 cut(s) | 333, 1016, 1114, 2062, 2889, 3222, 4495 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2722, 2754, 4416, 4448 |
| AleI | CACNNNNGTG | 1 cut(s) | 1209 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1330, 1362, 5298, 5330 |
| Alw21I | GWGCWC | 6 cut(s) | 556, 892, 2285, 2688, 4902, 5615 |
| Alw44I | GTGCAC | 1 cut(s) | 5611 |
| AlwNI | CAGNNNCTG | 8 cut(s) | 668, 965, 1169, 1967, 2546, 3157, 4288, 5624 |
| Ama87I | CYCGRG | 5 cut(s) | 254, 1767, 4512, 4529, 6055 |
| Aor13HI | TCCGGA | 1 cut(s) | 1120 |
| Aor51HI | AGCGCT | 1 cut(s) | 398 |
| ApaLI | GTGCAC | 1 cut(s) | 5611 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 3752, 3776, 3784, 3808, 5293, 5325 |
| AseI | ATTAAT | 2 cut(s) | 2823, 3396 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 774, 1411, 2037 |
| AsuC2I | CCSGG | 7 cut(s) | 200, 213, 519, 585, 1702, 1929, 5040 |
| AvaI | CYCGRG | 5 cut(s) | 254, 1767, 4512, 4529, 6055 |
| AxyI | CCTNAGG | 4 cut(s) | 4373, 5617, 5886, 6329 |
| BaeGI | GKGCMC | 1 cut(s) | 5615 |
| BalI | TGGCCA | 1 cut(s) | 2839 |
| BamHI | GGATCC | 4 cut(s) | 117, 3232, 3605, 3981 |
| BanI | GGYRCC | 2 cut(s) | 2066, 5954 |
| BanII | GRGCYC | 2 cut(s) | 2465, 4902 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 6171, 6203 |
| BauI | CACGAG | 1 cut(s) | 3841 |
| BbrPI | CACGTG | 2 cut(s) | 271, 4571 |
| BbsI | GAAGAC | 3 cut(s) | 721, 1010, 3469 |
| Bbv12I | GWGCWC | 6 cut(s) | 556, 892, 2285, 2688, 4902, 5615 |
| BbvCI | CCTCAGC | 2 cut(s) | 2901, 3018 |
| BceAI | ACGGC | 6 cut(s) | 301, 481, 844, 3628, 4059, 4934 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3327, 3361, 4258, 4292 |
| BciT130I | CCWGG | 7 cut(s) | 335, 1018, 1116, 2064, 2891, 3224, 4497 |
| BciVI | GTATCC | 2 cut(s) | 1307, 4829 |
| BclI | TGATCA | 2 cut(s) | 3682, 4522 |
| BcnI | CCSGG | 7 cut(s) | 200, 213, 519, 585, 1702, 1929, 5040 |
| BfmI | CTRYAG | 8 cut(s) | 779, 957, 1308, 2118, 4302, 5625, 5865, 5964 |
| BfoI | RGCGCY | 2 cut(s) | 400, 2344 |
| BfuAI | ACCTGC | 2 cut(s) | 320, 4449 |
| BfuI | GTATCC | 2 cut(s) | 1307, 4829 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 5530 |
| BglII | AGATCT | 1 cut(s) | 6141 |
| BmcAI | AGTACT | 2 cut(s) | 4160, 5652 |
| BmeT110I | CYCGRG | 5 cut(s) | 254, 1767, 4512, 4529, 6055 |
| BmgBI | CACGTC | 2 cut(s) | 154, 478 |
| BmrI | ACTGGG | 5 cut(s) | 1431, 4171, 5032, 5087, 6097 |
| BmuI | ACTGGG | 5 cut(s) | 1431, 4171, 5032, 5087, 6097 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4554 |
| BpiI | GAAGAC | 3 cut(s) | 721, 1010, 3469 |
| BpmI | CTGGAG | 6 cut(s) | 540, 2604, 3000, 5429, 5609, 6323 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2901, 3018, 4056 |
| BpuEI | CTTGAG | 6 cut(s) | 2411, 3610, 4304, 4916, 5143, 6166 |
| BpuMI | CCSGG | 7 cut(s) | 200, 213, 519, 585, 1702, 1929, 5040 |
| Bsa29I | ATCGAT | 3 cut(s) | 81, 102, 4268 |
| BsaAI | YACGTR | 4 cut(s) | 271, 2483, 3668, 4571 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1318, 3231, 4596 |
| BsaHI | GRCGYC | 2 cut(s) | 384, 4072 |
| BsaI | GGTCTC | 2 cut(s) | 5082, 6043 |
| BsaWI | WCCGGW | 2 cut(s) | 139, 1120 |
| Bse118I | RCCGGY | 4 cut(s) | 68, 187, 203, 5630 |
| Bse21I | CCTNAGG | 4 cut(s) | 4373, 5617, 5886, 6329 |
| Bse3DI | GCAATG | 2 cut(s) | 2595, 3301 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1318, 3231, 4596 |
| BseAI | TCCGGA | 1 cut(s) | 1120 |
| BseBI | CCWGG | 7 cut(s) | 335, 1018, 1116, 2064, 2891, 3224, 4497 |
| BseCI | ATCGAT | 3 cut(s) | 81, 102, 4268 |
| BseJI | GATNNNNATC | 3 cut(s) | 1318, 3231, 4596 |
| BseMI | GCAATG | 2 cut(s) | 2595, 3301 |
| BsePI | GCGCGC | 1 cut(s) | 64 |
| BseRI | GAGGAG | 6 cut(s) | 500, 2253, 2408, 3758, 3960, 5874 |
| BseSI | GKGCMC | 1 cut(s) | 5615 |
| BseX3I | CGGCCG | 2 cut(s) | 201, 328 |
| BseYI | CCCAGC | 5 cut(s) | 452, 2165, 2234, 3490, 3547 |
| BsgI | GTGCAG | 4 cut(s) | 2283, 2700, 4551, 6168 |
| Bsh1285I | CGRYCG | 4 cut(s) | 204, 223, 331, 4272 |
| BshNI | GGYRCC | 2 cut(s) | 2066, 5954 |
| BshVI | ATCGAT | 3 cut(s) | 81, 102, 4268 |
| BsiEI | CGRYCG | 4 cut(s) | 204, 223, 331, 4272 |
| BsiHKAI | GWGCWC | 6 cut(s) | 556, 892, 2285, 2688, 4902, 5615 |
| BsiHKCI | CYCGRG | 5 cut(s) | 254, 1767, 4512, 4529, 6055 |
| BsiWI | CGTACG | 1 cut(s) | 6357 |
| BslFI | GGGAC | 4 cut(s) | 1541, 3529, 3546, 6083 |
| BsmBI | CGTCTC | 2 cut(s) | 47, 3704 |
| BsmFI | GGGAC | 4 cut(s) | 1541, 3529, 3546, 6083 |
| BsmI | GAATGC | 3 cut(s) | 327, 1786, 4648 |
| Bso31I | GGTCTC | 2 cut(s) | 5082, 6043 |
| BsoBI | CYCGRG | 5 cut(s) | 254, 1767, 4512, 4529, 6055 |
| Bsp1286I | GDGCHC | 7 cut(s) | 556, 892, 2285, 2465, 2688, 4902, 5615 |
| Bsp13I | TCCGGA | 1 cut(s) | 1120 |
| Bsp1407I | TGTACA | 1 cut(s) | 5502 |
| Bsp19I | CCATGG | 3 cut(s) | 1108, 2877, 3552 |
| BspDI | ATCGAT | 3 cut(s) | 81, 102, 4268 |
| BspEI | TCCGGA | 1 cut(s) | 1120 |
| BspHI | TCATGA | 3 cut(s) | 169, 1504, 5227 |
| BspMAI | CTGCAG | 4 cut(s) | 783, 5629, 5869, 5968 |
| BspMI | ACCTGC | 2 cut(s) | 320, 4449 |
| BspQI | GCTCTTC | 1 cut(s) | 2178 |
| BspT107I | GGYRCC | 2 cut(s) | 2066, 5954 |
| BspTNI | GGTCTC | 2 cut(s) | 5082, 6043 |
| BsrBI | CCGCTC | 2 cut(s) | 295, 406 |
| BsrDI | GCAATG | 2 cut(s) | 2595, 3301 |
| BsrFI | RCCGGY | 4 cut(s) | 68, 187, 203, 5630 |
| BsrGI | TGTACA | 1 cut(s) | 5502 |
| BssAI | RCCGGY | 4 cut(s) | 68, 187, 203, 5630 |
| BssHII | GCGCGC | 1 cut(s) | 64 |
| BssNAI | GTATAC | 2 cut(s) | 1532, 1943 |
| BssNI | GRCGYC | 2 cut(s) | 384, 4072 |
| BssSI | CACGAG | 1 cut(s) | 3841 |
| BssT1I | CCWWGG | 6 cut(s) | 1108, 2411, 2877, 3538, 3552, 3863 |
| Bst1107I | GTATAC | 2 cut(s) | 1532, 1943 |
| Bst2BI | CACGAG | 1 cut(s) | 3841 |
| Bst2UI | CCWGG | 7 cut(s) | 335, 1018, 1116, 2064, 2891, 3224, 4497 |
| Bst6I | CTCTTC | 7 cut(s) | 970, 1108, 2178, 3078, 4143, 4326, 5697 |
| BstACI | GRCGYC | 2 cut(s) | 384, 4072 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 817, 4288, 4352 |
| BstAUI | TGTACA | 1 cut(s) | 5502 |
| BstBAI | YACGTR | 4 cut(s) | 271, 2483, 3668, 4571 |
| BstDSI | CCRYGG | 7 cut(s) | 45, 262, 1108, 1135, 2877, 3552, 4075 |
| BstEII | GGTNACC | 1 cut(s) | 2885 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3227, 4376 |
| BstH2I | RGCGCY | 2 cut(s) | 400, 2344 |
| BstMCI | CGRYCG | 4 cut(s) | 204, 223, 331, 4272 |
| BstNI | CCWGG | 7 cut(s) | 335, 1018, 1116, 2064, 2891, 3224, 4497 |
| BstNSI | RCATGY | 3 cut(s) | 1838, 4055, 4448 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4554 |
| BstPI | GGTNACC | 1 cut(s) | 2885 |
| BstSFI | CTRYAG | 8 cut(s) | 779, 957, 1308, 2118, 4302, 5625, 5865, 5964 |
| BstSLI | GKGCMC | 1 cut(s) | 5615 |
| BstSNI | TACGTA | 1 cut(s) | 3668 |
| BstV2I | GAAGAC | 3 cut(s) | 721, 1010, 3469 |
| BstX2I | RGATCY | 6 cut(s) | 117, 3232, 3605, 3981, 6141, 6568 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3243, 5407 |
| BstYI | RGATCY | 6 cut(s) | 117, 3232, 3605, 3981, 6141, 6568 |
| BstZ17I | GTATAC | 2 cut(s) | 1532, 1943 |
| BstZI | CGGCCG | 2 cut(s) | 201, 328 |
| Bsu15I | ATCGAT | 3 cut(s) | 81, 102, 4268 |
| Bsu36I | CCTNAGG | 4 cut(s) | 4373, 5617, 5886, 6329 |
| BsuI | GTATCC | 2 cut(s) | 1307, 4829 |
| BsuTUI | ATCGAT | 3 cut(s) | 81, 102, 4268 |
| BtgI | CCRYGG | 7 cut(s) | 45, 262, 1108, 1135, 2877, 3552, 4075 |
| BtrI | CACGTC | 2 cut(s) | 154, 478 |
| BtsI | GCAGTG | 3 cut(s) | 2672, 5545, 5961 |
| BveI | ACCTGC | 2 cut(s) | 320, 4449 |
| CaiI | CAGNNNCTG | 8 cut(s) | 668, 965, 1169, 1967, 2546, 3157, 4288, 5624 |
| CciI | TCATGA | 3 cut(s) | 169, 1504, 5227 |
| CciNI | GCGGCCGC | 1 cut(s) | 328 |
| Cfr10I | RCCGGY | 4 cut(s) | 68, 187, 203, 5630 |
| Cfr42I | CCGCGG | 2 cut(s) | 48, 265 |
| ClaI | ATCGAT | 3 cut(s) | 81, 102, 4268 |
| CseI | GACGC | 5 cut(s) | 70, 228, 373, 4080, 6252 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 3168, 3203, 3871, 3906 |
| DraI | TTTAAA | 2 cut(s) | 2497, 3361 |
| DraIII | CACNNNGTG | 2 cut(s) | 274, 817 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 356, 3473 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 356, 3473 |
| EaeI | YGGCCR | 4 cut(s) | 201, 328, 401, 2837 |
| EagI | CGGCCG | 2 cut(s) | 201, 328 |
| Eam1104I | CTCTTC | 7 cut(s) | 970, 1108, 2178, 3078, 4143, 4326, 5697 |
| EarI | CTCTTC | 7 cut(s) | 970, 1108, 2178, 3078, 4143, 4326, 5697 |
| EciI | GGCGGA | 4 cut(s) | 31, 65, 497, 3630 |
| Ecl136II | GAGCTC | 1 cut(s) | 4900 |
| EclXI | CGGCCG | 2 cut(s) | 201, 328 |
| Eco105I | TACGTA | 1 cut(s) | 3668 |
| Eco130I | CCWWGG | 6 cut(s) | 1108, 2411, 2877, 3538, 3552, 3863 |
| Eco24I | GRGCYC | 2 cut(s) | 2465, 4902 |
| Eco31I | GGTCTC | 2 cut(s) | 5082, 6043 |
| Eco32I | GATATC | 2 cut(s) | 2779, 5452 |
| Eco47III | AGCGCT | 1 cut(s) | 398 |
| Eco52I | CGGCCG | 2 cut(s) | 201, 328 |
| Eco53kI | GAGCTC | 1 cut(s) | 4900 |
| Eco72I | CACGTG | 2 cut(s) | 271, 4571 |
| Eco81I | CCTNAGG | 4 cut(s) | 4373, 5617, 5886, 6329 |
| Eco88I | CYCGRG | 5 cut(s) | 254, 1767, 4512, 4529, 6055 |
| Eco91I | GGTNACC | 1 cut(s) | 2885 |
| EcoICRI | GAGCTC | 1 cut(s) | 4900 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3227, 4376 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1275, 3220, 3305, 3543 |
| EcoO65I | GGTNACC | 1 cut(s) | 2885 |
| EcoRI | GAATTC | 5 cut(s) | 760, 842, 4166, 5820, 6451 |
| EcoRII | CCWGG | 7 cut(s) | 333, 1016, 1114, 2062, 2889, 3222, 4495 |
| EcoRV | GATATC | 2 cut(s) | 2779, 5452 |
| EcoT14I | CCWWGG | 6 cut(s) | 1108, 2411, 2877, 3538, 3552, 3863 |
| EcoT22I | ATGCAT | 3 cut(s) | 1193, 3301, 4650 |
| EcoT38I | GRGCYC | 2 cut(s) | 2465, 4902 |
| ErhI | CCWWGG | 6 cut(s) | 1108, 2411, 2877, 3538, 3552, 3863 |
| Esp3I | CGTCTC | 2 cut(s) | 47, 3704 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 3020, 3052, 4797, 4829, 6206, 6238 |
| FaqI | GGGAC | 4 cut(s) | 1541, 3529, 3546, 6083 |
| FauI | CCCGC | 5 cut(s) | 184, 192, 239, 288, 2980 |
| FauNDI | CATATG | 5 cut(s) | 874, 1042, 1536, 5179, 5731 |
| FbaI | TGATCA | 2 cut(s) | 3682, 4522 |
| FblI | GTMKAC | 3 cut(s) | 1531, 1942, 3285 |
| FriOI | GRGCYC | 2 cut(s) | 2465, 4902 |
| FspI | TGCGCA | 1 cut(s) | 4982 |
| GsaI | CCCAGC | 5 cut(s) | 456, 2169, 2238, 3494, 3551 |
| GsuI | CTGGAG | 6 cut(s) | 540, 2604, 3000, 5429, 5609, 6323 |
| HaeII | RGCGCY | 2 cut(s) | 400, 2344 |
| HgaI | GACGC | 5 cut(s) | 70, 228, 373, 4080, 6252 |
| Hin1I | GRCGYC | 2 cut(s) | 384, 4072 |
| HincII | GTYRAC | 4 cut(s) | 4559, 4609, 4689, 6553 |
| HindII | GTYRAC | 4 cut(s) | 4559, 4609, 4689, 6553 |
| HindIII | AAGCTT | 4 cut(s) | 2469, 3627, 4970, 6198 |
| Hpy99I | CGWCG | 9 cut(s) | 29, 61, 64, 244, 287, 461, 473, 3450, 4074 |
| HpyCH4IV | ACGT | 8 cut(s) | 153, 270, 477, 2482, 3667, 3713, 4470, 4570 |
| HpySE526I | ACGT | 8 cut(s) | 153, 270, 477, 2482, 3667, 3713, 4470, 4570 |
| Hsp92I | GRCGYC | 2 cut(s) | 384, 4072 |
| KflI | GGGWCCC | 1 cut(s) | 3543 |
| Kpn2I | TCCGGA | 1 cut(s) | 1120 |
| KroI | GCCGGC | 1 cut(s) | 187 |
| KroNI | GCCGGC | 1 cut(s) | 189 |
| Ksp22I | TGATCA | 2 cut(s) | 3682, 4522 |
| KspI | CCGCGG | 2 cut(s) | 48, 265 |
| LguI | GCTCTTC | 1 cut(s) | 2178 |
| MaeII | ACGT | 8 cut(s) | 153, 270, 477, 2482, 3667, 3713, 4470, 4570 |
| MbiI | CCGCTC | 2 cut(s) | 295, 406 |
| MfeI | CAATTG | 4 cut(s) | 1634, 1889, 6069, 6294 |
| MflI | RGATCY | 6 cut(s) | 117, 3232, 3605, 3981, 6141, 6568 |
| MhlI | GDGCHC | 7 cut(s) | 556, 892, 2285, 2465, 2688, 4902, 5615 |
| MlsI | TGGCCA | 1 cut(s) | 2839 |
| MluNI | TGGCCA | 1 cut(s) | 2839 |
| MmeI | TCCRAC | 9 cut(s) | 691, 1527, 2113, 4488, 4938, 4959, 5418, 6106, 6480 |
| Mox20I | TGGCCA | 1 cut(s) | 2839 |
| Mph1103I | ATGCAT | 3 cut(s) | 1193, 3301, 4650 |
| MreI | CGCCGGCG | 1 cut(s) | 187 |
| MroI | TCCGGA | 1 cut(s) | 1120 |
| MroNI | GCCGGC | 1 cut(s) | 187 |
| MroXI | GAANNNNTTC | 3 cut(s) | 774, 1411, 2037 |
| MscI | TGGCCA | 1 cut(s) | 2839 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1209, 3241, 4176, 5601, 6090 |
| Msp20I | TGGCCA | 1 cut(s) | 2839 |
| MspA1I | CMGCKG | 8 cut(s) | 47, 264, 740, 2937, 3602, 5719, 5993, 6365 |
| MunI | CAATTG | 4 cut(s) | 1634, 1889, 6069, 6294 |
| Mva1269I | GAATGC | 3 cut(s) | 327, 1786, 4648 |
| MvaI | CCWGG | 7 cut(s) | 335, 1018, 1116, 2064, 2891, 3224, 4497 |
| NaeI | GCCGGC | 1 cut(s) | 189 |
| NciI | CCSGG | 7 cut(s) | 200, 213, 519, 585, 1702, 1929, 5040 |
| NcoI | CCATGG | 3 cut(s) | 1108, 2877, 3552 |
| NdeI | CATATG | 5 cut(s) | 874, 1042, 1536, 5179, 5731 |
| NgoMIV | GCCGGC | 1 cut(s) | 187 |
| NmeAIII | GCCGAG | 5 cut(s) | 209, 387, 2095, 3541, 3829 |
| NotI | GCGGCCGC | 1 cut(s) | 328 |
| NsbI | TGCGCA | 1 cut(s) | 4982 |
| NsiI | ATGCAT | 3 cut(s) | 1193, 3301, 4650 |
| NspI | RCATGY | 3 cut(s) | 1838, 4055, 4448 |
| OliI | CACNNNNGTG | 1 cut(s) | 1209 |
| PaeR7I | CTCGAG | 2 cut(s) | 1767, 4529 |
| PagI | TCATGA | 3 cut(s) | 169, 1504, 5227 |
| PaqCI | CACCTGC | 1 cut(s) | 320 |
| PauI | GCGCGC | 1 cut(s) | 64 |
| PciSI | GCTCTTC | 1 cut(s) | 2178 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 108, 236, 465 |
| PctI | GAATGC | 3 cut(s) | 327, 1786, 4648 |
| PdiI | GCCGGC | 1 cut(s) | 189 |
| PdmI | GAANNNNTTC | 3 cut(s) | 774, 1411, 2037 |
| Pfl23II | CGTACG | 1 cut(s) | 6357 |
| PflFI | GACNNNGTC | 2 cut(s) | 29, 3695 |
| Ple19I | CGATCG | 1 cut(s) | 4272 |
| PmaCI | CACGTG | 2 cut(s) | 271, 4571 |
| PmlI | CACGTG | 2 cut(s) | 271, 4571 |
| Ppu21I | YACGTR | 4 cut(s) | 271, 2483, 3668, 4571 |
| PpuMI | RGGWCCY | 2 cut(s) | 3305, 3543 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4554 |
| PshBI | ATTAAT | 2 cut(s) | 2823, 3396 |
| Psp124BI | GAGCTC | 1 cut(s) | 4902 |
| Psp5II | RGGWCCY | 2 cut(s) | 3305, 3543 |
| Psp6I | CCWGG | 7 cut(s) | 333, 1016, 1114, 2062, 2889, 3222, 4495 |
| PspCI | CACGTG | 2 cut(s) | 271, 4571 |
| PspEI | GGTNACC | 1 cut(s) | 2885 |
| PspFI | CCCAGC | 5 cut(s) | 452, 2165, 2234, 3490, 3547 |
| PspGI | CCWGG | 7 cut(s) | 333, 1016, 1114, 2062, 2889, 3222, 4495 |
| PspLI | CGTACG | 1 cut(s) | 6357 |
| PspPPI | RGGWCCY | 2 cut(s) | 3305, 3543 |
| PspXI | VCTCGAGB | 1 cut(s) | 4529 |
| PstI | CTGCAG | 4 cut(s) | 783, 5629, 5869, 5968 |
| PstNI | CAGNNNCTG | 8 cut(s) | 668, 965, 1169, 1967, 2546, 3157, 4288, 5624 |
| PsuI | RGATCY | 6 cut(s) | 117, 3232, 3605, 3981, 6141, 6568 |
| PsyI | GACNNNGTC | 2 cut(s) | 29, 3695 |
| PteI | GCGCGC | 1 cut(s) | 64 |
| PvuI | CGATCG | 1 cut(s) | 4272 |
| PvuII | CAGCTG | 5 cut(s) | 740, 3602, 5719, 5993, 6365 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1209, 3241, 4176, 5601, 6090 |
| SacI | GAGCTC | 1 cut(s) | 4902 |
| SacII | CCGCGG | 2 cut(s) | 48, 265 |
| SapI | GCTCTTC | 1 cut(s) | 2178 |
| ScaI | AGTACT | 2 cut(s) | 4160, 5652 |
| SduI | GDGCHC | 7 cut(s) | 556, 892, 2285, 2465, 2688, 4902, 5615 |
| SfcI | CTRYAG | 8 cut(s) | 779, 957, 1308, 2118, 4302, 5625, 5865, 5964 |
| Sfr274I | CTCGAG | 2 cut(s) | 1767, 4529 |
| Sfr303I | CCGCGG | 2 cut(s) | 48, 265 |
| SgrAI | CRCCGGYG | 1 cut(s) | 187 |
| SgrBI | CCGCGG | 2 cut(s) | 48, 265 |
| SlaI | CTCGAG | 2 cut(s) | 1767, 4529 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1209, 3241, 4176, 5601, 6090 |
| SmlI | CTYRAG | 8 cut(s) | 1767, 2390, 3589, 4319, 4529, 4895, 5158, 6145 |
| SmoI | CTYRAG | 8 cut(s) | 1767, 2390, 3589, 4319, 4529, 4895, 5158, 6145 |
| SnaBI | TACGTA | 1 cut(s) | 3668 |
| SspI | AATATT | 1 cut(s) | 5262 |
| SstI | GAGCTC | 1 cut(s) | 4902 |
| StyI | CCWWGG | 6 cut(s) | 1108, 2411, 2877, 3538, 3552, 3863 |
| TaiI | ACGT | 8 cut(s) | 156, 273, 480, 2485, 3670, 3716, 4473, 4573 |
| TaqII | GACCGA | 1 cut(s) | 6335 |
| TatI | WGTACW | 4 cut(s) | 4158, 5019, 5502, 5650 |
| TspGWI | ACGGA | 9 cut(s) | 26, 512, 828, 1530, 2866, 3403, 3434, 3623, 4219 |
| Tth111I | GACNNNGTC | 2 cut(s) | 29, 3695 |
| VneI | GTGCAC | 1 cut(s) | 5611 |
| VspI | ATTAAT | 2 cut(s) | 2823, 3396 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3227, 4376 |
| XbaI | TCTAGA | 2 cut(s) | 4325, 5537 |
| XceI | RCATGY | 3 cut(s) | 1838, 4055, 4448 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 2015, 2579, 3993, 4718 |
| XhoI | CTCGAG | 2 cut(s) | 1767, 4529 |
| XmiI | GTMKAC | 3 cut(s) | 1531, 1942, 3285 |
| XmnI | GAANNNNTTC | 3 cut(s) | 774, 1411, 2037 |
| ZrmI | AGTACT | 2 cut(s) | 4160, 5652 |
| Zsp2I | ATGCAT | 3 cut(s) | 1193, 3301, 4650 |