Omega-3 fatty acid desaturase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11170 AT5G05580 AT5G05580 |
| fragaria_vesca | FvH4_6g11310 FvH4_6g11310 FvH4_6g11310 FvH4_6g11310 FvH4_7g24590 FvH4_7g24590 FvH4_7g24590 |
| malus_domestica | MD01G1154100.v1.1 MD04G1155400.v1.1 MD07G1223100.v1.1 MD12G1168600.v1.1 MD17G1258700.v1.1 |
| prunus_persica | Prupe.2G251200_v2.0.a1 Prupe.6G278800_v2.0.a1 Prupe.6G278800_v2.0.a1 |
| pyrus_communis | pycom01g17140 pycom04g13980 pycom07g20170 pycom12g16010 |
| rosa_chinensis | RchiOBHm_Chr1g0370421 RchiOBHm_Chr3g0462851 |
| rosa_laevigata | RLG00000024827 RLG00000027049 |
| rosa_multiflora | Rmu_sc0000766.1_g000013 Rmu_sc0005656.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00286590 Rroxscaffold_6G00417140 |
| rosa_rugosa | Rorug01G0356300 Rorug03G0059600 |
| rosa_samantha | Rh1AG364800 Rh1BG328000 Rh1CG341000 Rh1DG358300 Rh3AG117800 Rh3BG121600 Rh3CG124500 Rh3DG123200 |
| rosa_wichuraiana | Rw1G032100 Rw1G032150 Rw3G009990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 756 |
| Acc65I | GGTACC | 1 cut(s) | 1067 |
| AccB1I | GGYRCC | 1 cut(s) | 1067 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 441, 554, 1201 |
| AccI | GTMKAC | 1 cut(s) | 51 |
| AccIII | TCCGGA | 1 cut(s) | 1289 |
| AciI | CCGC | 2 cut(s) | 371, 380 |
| AcoI | YGGCCR | 2 cut(s) | 460, 952 |
| AcsI | RAATTY | 1 cut(s) | 894 |
| AfaI | GTAC | 2 cut(s) | 1069, 1157 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 441, 554, 905, 1148, 1201 |
| AflII | CTTAAG | 1 cut(s) | 881 |
| AgsI | TTSAA | 5 cut(s) | 190, 537, 646, 1045, 1225 |
| AjnI | CCWGG | 2 cut(s) | 244, 733 |
| AluBI | AGCT | 7 cut(s) | 254, 483, 502, 886, 967, 1136, 1221 |
| AluI | AGCT | 7 cut(s) | 254, 483, 502, 886, 967, 1136, 1221 |
| Alw21I | GWGCWC | 2 cut(s) | 184, 434 |
| Aor13HI | TCCGGA | 1 cut(s) | 1289 |
| AoxI | GGCC | 7 cut(s) | 28, 70, 92, 407, 460, 952, 1181 |
| ApeKI | GCWGC | 4 cut(s) | 251, 284, 765, 1133 |
| ApoI | RAATTY | 1 cut(s) | 894 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 641 |
| Asp718I | GGTACC | 1 cut(s) | 1067 |
| AspLEI | GCGC | 1 cut(s) | 169 |
| AspS9I | GGNCC | 2 cut(s) | 866, 1181 |
| AsuHPI | GGTGA | 6 cut(s) | 67, 208, 284, 796, 938, 1076 |
| AvaII | GGWCC | 1 cut(s) | 866 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1059, 1092 |
| BalI | TGGCCA | 2 cut(s) | 462, 954 |
| BanI | GGYRCC | 1 cut(s) | 1067 |
| BanII | GRGCYC | 1 cut(s) | 448 |
| BbsI | GAAGAC | 1 cut(s) | 966 |
| Bbv12I | GWGCWC | 2 cut(s) | 184, 434 |
| BbvI | GCAGC | 4 cut(s) | 263, 296, 777, 1145 |
| BccI | CCATC | 2 cut(s) | 221, 552 |
| BciT130I | CCWGG | 2 cut(s) | 246, 735 |
| BclI | TGATCA | 1 cut(s) | 220 |
| BfaI | CTAG | 1 cut(s) | 45 |
| BfmI | CTRYAG | 1 cut(s) | 1159 |
| BfoI | RGCGCY | 1 cut(s) | 170 |
| BfrI | CTTAAG | 1 cut(s) | 881 |
| BisI | GCNGC | 6 cut(s) | 252, 285, 372, 381, 766, 1134 |
| BlpI | GCTNAGC | 1 cut(s) | 1137 |
| BlsI | GCNGC | 6 cut(s) | 253, 286, 373, 382, 767, 1135 |
| BmcAI | AGTACT | 1 cut(s) | 1157 |
| Bme1390I | CCNGG | 2 cut(s) | 246, 735 |
| Bme18I | GGWCC | 1 cut(s) | 866 |
| BmgT120I | GGNCC | 2 cut(s) | 866, 1181 |
| BmiI | GGNNCC | 3 cut(s) | 867, 1069, 1167 |
| BmrFI | CCNGG | 2 cut(s) | 246, 735 |
| BmrI | ACTGGG | 2 cut(s) | 913, 1260 |
| BmsI | GCATC | 1 cut(s) | 631 |
| BmuI | ACTGGG | 2 cut(s) | 913, 1260 |
| BpiI | GAAGAC | 1 cut(s) | 966 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1137 |
| BpuEI | CTTGAG | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 8 cut(s) | 118, 244, 317, 553, 592, 949, 971, 1128 |
| BsaWI | WCCGGW | 1 cut(s) | 1289 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 553, 583, 1197, 1227 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 441, 554, 905, 1148, 1201 |
| Bse118I | RCCGGY | 1 cut(s) | 1141 |
| Bse1I | ACTGG | 3 cut(s) | 422, 908, 1255 |
| Bse3DI | GCAATG | 2 cut(s) | 95, 834 |
| BseAI | TCCGGA | 1 cut(s) | 1289 |
| BseBI | CCWGG | 2 cut(s) | 246, 735 |
| BseDI | CCNNGG | 8 cut(s) | 118, 244, 317, 553, 592, 949, 971, 1128 |
| BseGI | GGATG | 4 cut(s) | 352, 563, 622, 1261 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 441, 554, 905, 1148, 1201 |
| BseMI | GCAATG | 2 cut(s) | 95, 834 |
| BseMII | CTCAG | 4 cut(s) | 33, 440, 624, 680 |
| BseNI | ACTGG | 3 cut(s) | 422, 908, 1255 |
| BseRI | GAGGAG | 2 cut(s) | 246, 1020 |
| BseXI | GCAGC | 4 cut(s) | 263, 296, 777, 1145 |
| BsgI | GTGCAG | 1 cut(s) | 270 |
| BshFI | GGCC | 7 cut(s) | 30, 72, 94, 409, 462, 954, 1183 |
| BshNI | GGYRCC | 1 cut(s) | 1067 |
| BsiHKAI | GWGCWC | 2 cut(s) | 184, 434 |
| BsiSI | CCGG | 2 cut(s) | 1142, 1290 |
| BslFI | GGGAC | 1 cut(s) | 530 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 441, 554, 905, 1148, 1201 |
| BsmFI | GGGAC | 1 cut(s) | 530 |
| BsnI | GGCC | 7 cut(s) | 30, 72, 94, 409, 462, 954, 1183 |
| Bsp1286I | GDGCHC | 3 cut(s) | 184, 434, 448 |
| Bsp13I | TCCGGA | 1 cut(s) | 1289 |
| Bsp143I | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1137 |
| Bsp19I | CCATGG | 4 cut(s) | 553, 592, 949, 971 |
| BspACI | CCGC | 2 cut(s) | 371, 380 |
| BspANI | GGCC | 7 cut(s) | 30, 72, 94, 409, 462, 954, 1183 |
| BspCNI | CTCAG | 4 cut(s) | 32, 439, 625, 679 |
| BspEI | TCCGGA | 1 cut(s) | 1289 |
| BspHI | TCATGA | 1 cut(s) | 1057 |
| BspLI | GGNNCC | 3 cut(s) | 867, 1069, 1167 |
| BspT107I | GGYRCC | 1 cut(s) | 1067 |
| BspTI | CTTAAG | 1 cut(s) | 881 |
| BsrDI | GCAATG | 2 cut(s) | 95, 834 |
| BsrFI | RCCGGY | 1 cut(s) | 1141 |
| BsrI | ACTGG | 3 cut(s) | 422, 908, 1255 |
| BssAI | RCCGGY | 1 cut(s) | 1141 |
| BssECI | CCNNGG | 8 cut(s) | 118, 244, 317, 553, 592, 949, 971, 1128 |
| BssMI | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| BssT1I | CCWWGG | 6 cut(s) | 118, 317, 553, 592, 949, 971 |
| Bst2UI | CCWGG | 2 cut(s) | 246, 735 |
| Bst4CI | ACNGT | 1 cut(s) | 1041 |
| BstAFI | CTTAAG | 1 cut(s) | 881 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 833 |
| BstC8I | GCNNGC | 1 cut(s) | 702 |
| BstDSI | CCRYGG | 4 cut(s) | 553, 592, 949, 971 |
| BstF5I | GGATG | 4 cut(s) | 352, 563, 622, 1261 |
| BstH2I | RGCGCY | 1 cut(s) | 170 |
| BstHHI | GCGC | 1 cut(s) | 169 |
| BstKTI | GATC | 4 cut(s) | 223, 1027, 1234, 1295 |
| BstMBI | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 377, 380, 833, 1130 |
| BstNI | CCWGG | 2 cut(s) | 246, 735 |
| BstSCI | CCNGG | 2 cut(s) | 244, 733 |
| BstSFI | CTRYAG | 1 cut(s) | 1159 |
| BstV1I | GCAGC | 4 cut(s) | 263, 296, 777, 1145 |
| BstV2I | GAAGAC | 1 cut(s) | 966 |
| BstX2I | RGATCY | 1 cut(s) | 1292 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 470 |
| BstYI | RGATCY | 1 cut(s) | 1292 |
| BsuRI | GGCC | 7 cut(s) | 30, 72, 94, 409, 462, 954, 1183 |
| BtgI | CCRYGG | 4 cut(s) | 553, 592, 949, 971 |
| BtsCI | GGATG | 4 cut(s) | 352, 563, 622, 1261 |
| Cac8I | GCNNGC | 1 cut(s) | 702 |
| CciI | TCATGA | 1 cut(s) | 1057 |
| CfoI | GCGC | 1 cut(s) | 169 |
| Cfr10I | RCCGGY | 1 cut(s) | 1141 |
| Cfr13I | GGNCC | 2 cut(s) | 866, 1181 |
| Csp6I | GTAC | 2 cut(s) | 1068, 1156 |
| CviQI | GTAC | 2 cut(s) | 1068, 1156 |
| DpnI | GATC | 4 cut(s) | 222, 1026, 1233, 1294 |
| DpnII | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| EaeI | YGGCCR | 2 cut(s) | 460, 952 |
| Eco130I | CCWWGG | 6 cut(s) | 118, 317, 553, 592, 949, 971 |
| Eco24I | GRGCYC | 1 cut(s) | 448 |
| Eco47I | GGWCC | 1 cut(s) | 866 |
| EcoRI | GAATTC | 1 cut(s) | 894 |
| EcoRII | CCWGG | 2 cut(s) | 244, 733 |
| EcoT14I | CCWWGG | 6 cut(s) | 118, 317, 553, 592, 949, 971 |
| EcoT38I | GRGCYC | 1 cut(s) | 448 |
| ErhI | CCWWGG | 6 cut(s) | 118, 317, 553, 592, 949, 971 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 951, 983 |
| FaqI | GGGAC | 1 cut(s) | 530 |
| FbaI | TGATCA | 1 cut(s) | 220 |
| FblI | GTMKAC | 1 cut(s) | 51 |
| Fnu4HI | GCNGC | 6 cut(s) | 252, 285, 372, 381, 766, 1134 |
| FokI | GGATG | 4 cut(s) | 359, 570, 609, 1268 |
| FriOI | GRGCYC | 1 cut(s) | 448 |
| Fsp4HI | GCNGC | 6 cut(s) | 252, 285, 372, 381, 766, 1134 |
| FspBI | CTAG | 1 cut(s) | 45 |
| GlaI | GCGC | 1 cut(s) | 168 |
| GluI | GCNGC | 6 cut(s) | 252, 285, 372, 381, 766, 1134 |
| HaeII | RGCGCY | 1 cut(s) | 170 |
| HaeIII | GGCC | 7 cut(s) | 30, 72, 94, 409, 462, 954, 1183 |
| HapII | CCGG | 2 cut(s) | 1142, 1290 |
| HhaI | GCGC | 1 cut(s) | 169 |
| Hin6I | GCGC | 1 cut(s) | 167 |
| HinP1I | GCGC | 1 cut(s) | 167 |
| HincII | GTYRAC | 1 cut(s) | 630 |
| HindII | GTYRAC | 1 cut(s) | 630 |
| HindIII | AAGCTT | 4 cut(s) | 481, 884, 965, 1219 |
| HinfI | GANTC | 5 cut(s) | 48, 199, 313, 614, 1206 |
| HpaI | GTTAAC | 1 cut(s) | 630 |
| HpaII | CCGG | 2 cut(s) | 1142, 1290 |
| HphI | GGTGA | 6 cut(s) | 67, 208, 284, 796, 938, 1076 |
| Hpy166II | GTNNAC | 2 cut(s) | 52, 630 |
| Hpy188I | TCNGA | 6 cut(s) | 22, 429, 588, 669, 762, 852 |
| Hpy188III | TCNNGA | 5 cut(s) | 224, 1028, 1058, 1225, 1290 |
| Hpy8I | GTNNAC | 2 cut(s) | 52, 630 |
| HpyAV | CCTTC | 1 cut(s) | 652 |
| HpyCH4III | ACNGT | 1 cut(s) | 1041 |
| HpyCH4V | TGCA | 4 cut(s) | 100, 251, 827, 874 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 377, 380, 833, 1130 |
| HspAI | GCGC | 1 cut(s) | 167 |
| Kpn2I | TCCGGA | 1 cut(s) | 1289 |
| KpnI | GGTACC | 1 cut(s) | 1071 |
| Ksp22I | TGATCA | 1 cut(s) | 220 |
| KspAI | GTTAAC | 1 cut(s) | 630 |
| Kzo9I | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| LmnI | GCTCC | 3 cut(s) | 187, 259, 1165 |
| Lsp1109I | GCAGC | 4 cut(s) | 263, 296, 777, 1145 |
| LweI | GCATC | 1 cut(s) | 631 |
| MaeI | CTAG | 1 cut(s) | 45 |
| MaeIII | GTNAC | 5 cut(s) | 196, 569, 661, 931, 1028 |
| MalI | GATC | 4 cut(s) | 222, 1026, 1233, 1294 |
| MboI | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| MboII | GAAGA | 7 cut(s) | 117, 221, 515, 518, 525, 770, 971 |
| MfeI | CAATTG | 1 cut(s) | 394 |
| MflI | RGATCY | 1 cut(s) | 1292 |
| MhlI | GDGCHC | 3 cut(s) | 184, 434, 448 |
| MlsI | TGGCCA | 2 cut(s) | 462, 954 |
| MluCI | AATT | 4 cut(s) | 265, 288, 394, 894 |
| MluNI | TGGCCA | 2 cut(s) | 462, 954 |
| MlyI | GAGTC | 4 cut(s) | 57, 193, 623, 1215 |
| MmeI | TCCRAC | 3 cut(s) | 800, 806, 903 |
| Mox20I | TGGCCA | 2 cut(s) | 462, 954 |
| MroI | TCCGGA | 1 cut(s) | 1289 |
| MroXI | GAANNNNTTC | 1 cut(s) | 641 |
| MscI | TGGCCA | 2 cut(s) | 462, 954 |
| MseI | TTAA | 5 cut(s) | 264, 309, 390, 629, 882 |
| MslI | CAYNNNNRTG | 4 cut(s) | 468, 597, 948, 954 |
| Msp20I | TGGCCA | 2 cut(s) | 462, 954 |
| MspCI | CTTAAG | 1 cut(s) | 881 |
| MspI | CCGG | 2 cut(s) | 1142, 1290 |
| MspR9I | CCNGG | 2 cut(s) | 246, 735 |
| MunI | CAATTG | 1 cut(s) | 394 |
| MvaI | CCWGG | 2 cut(s) | 246, 735 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 377, 380, 833, 1130 |
| NcoI | CCATGG | 4 cut(s) | 553, 592, 949, 971 |
| NdeII | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| NlaIV | GGNNCC | 3 cut(s) | 867, 1069, 1167 |
| NmuCI | GTSAC | 4 cut(s) | 196, 569, 931, 1028 |
| PagI | TCATGA | 1 cut(s) | 1057 |
| PdmI | GAANNNNTTC | 1 cut(s) | 641 |
| PfeI | GAWTC | 1 cut(s) | 313 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 441, 554, 1201 |
| PfoI | TCCNGGA | 1 cut(s) | 733 |
| PkrI | GCNGC | 6 cut(s) | 253, 286, 373, 382, 767, 1135 |
| PleI | GAGTC | 4 cut(s) | 56, 193, 622, 1214 |
| PpsI | GAGTC | 4 cut(s) | 56, 193, 622, 1214 |
| PsiI | TTATAA | 1 cut(s) | 756 |
| Psp6I | CCWGG | 2 cut(s) | 244, 733 |
| PspGI | CCWGG | 2 cut(s) | 244, 733 |
| PspN4I | GGNNCC | 3 cut(s) | 867, 1069, 1167 |
| PspPI | GGNCC | 2 cut(s) | 866, 1181 |
| PsuI | RGATCY | 1 cut(s) | 1292 |
| RsaI | GTAC | 2 cut(s) | 1069, 1157 |
| RsaNI | GTAC | 2 cut(s) | 1068, 1156 |
| RseI | CAYNNNNRTG | 4 cut(s) | 468, 597, 948, 954 |
| SaqAI | TTAA | 5 cut(s) | 264, 309, 390, 629, 882 |
| SatI | GCNGC | 6 cut(s) | 252, 285, 372, 381, 766, 1134 |
| Sau3AI | GATC | 4 cut(s) | 220, 1024, 1231, 1292 |
| Sau96I | GGNCC | 2 cut(s) | 866, 1181 |
| ScaI | AGTACT | 1 cut(s) | 1157 |
| SchI | GAGTC | 4 cut(s) | 57, 193, 623, 1215 |
| ScrFI | CCNGG | 2 cut(s) | 246, 735 |
| SduI | GDGCHC | 3 cut(s) | 184, 434, 448 |
| SfaNI | GCATC | 1 cut(s) | 631 |
| SfcI | CTRYAG | 1 cut(s) | 1159 |
| SinI | GGWCC | 1 cut(s) | 866 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 468, 597, 948, 954 |
| SmlI | CTYRAG | 2 cut(s) | 32, 881 |
| SmoI | CTYRAG | 2 cut(s) | 32, 881 |
| Sse9I | AATT | 4 cut(s) | 265, 288, 394, 894 |
| SsiI | CCGC | 2 cut(s) | 371, 380 |
| SspMI | CTAG | 1 cut(s) | 45 |
| StyD4I | CCNGG | 2 cut(s) | 244, 733 |
| StyI | CCWWGG | 6 cut(s) | 118, 317, 553, 592, 949, 971 |
| TaaI | ACNGT | 1 cut(s) | 1041 |
| TaqI | TCGA | 1 cut(s) | 603 |
| TasI | AATT | 4 cut(s) | 265, 288, 394, 894 |
| TatI | WGTACW | 1 cut(s) | 1155 |
| TauI | GCSGC | 2 cut(s) | 374, 383 |
| TfiI | GAWTC | 1 cut(s) | 313 |
| Tru1I | TTAA | 5 cut(s) | 264, 309, 390, 629, 882 |
| Tru9I | TTAA | 5 cut(s) | 264, 309, 390, 629, 882 |
| TseFI | GTSAC | 4 cut(s) | 196, 569, 931, 1028 |
| TseI | GCWGC | 4 cut(s) | 251, 284, 765, 1133 |
| Tsp45I | GTSAC | 4 cut(s) | 196, 569, 931, 1028 |
| TspDTI | ATGAA | 3 cut(s) | 518, 972, 1043 |
| TspGWI | ACGGA | 2 cut(s) | 249, 615 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 441, 554, 1201 |
| Vha464I | CTTAAG | 1 cut(s) | 881 |
| VpaK11BI | GGWCC | 1 cut(s) | 866 |
| XapI | RAATTY | 1 cut(s) | 894 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 300, 555 |
| XmiI | GTMKAC | 1 cut(s) | 51 |
| XmnI | GAANNNNTTC | 1 cut(s) | 641 |
| XspI | CTAG | 1 cut(s) | 45 |
| ZrmI | AGTACT | 1 cut(s) | 1157 |