FvH4_7g26260

RING finger and transmembrane domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0003923
Physical Location & Seq
Forward (+)
19891190 .. 19895984
4795 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26260.t1

Sequence Viewer

Length: 1389 bp
ATGGAGGCAACGCCGCCGGGGAATGGGAGTAATGGCGGAGGAGGAGGTGAGGATCGGACGACGTCGTTTGGCGCTATGCAATTCCCGGCGCTGCGATTCTTCCGGTCGCCGCTTTCTTTTCTGTTAGATTACTCCGGTATACTCTCCCCCACCTCGTCTTCTTCGTCGTTGTCGTCGTCGTCGTCGTCCTCGCGCCACGAGAGCGACGCTGCGGCGGTCAACGCCGTCGCCGATTCGCGGCCGCATTCTCCGACGGCCTGCGCGAGCGGCGGCGGCTCCAGCAACGCCGGGGAGGTTTCGATTCGGATCATCGGCGCCGGGGAGCAGGAGGACCGCGGGAGTGGTGAGGAAGCGACGGCGGTGCAGGATGGAGGAGGGGTGGGGGGGTTGGATAGTCAGGCTGGGATGGATGAGAGAGTGCCCTTGGTGCCTCCGTCGGCGCCGGAGAATGAGGCCGGGGAGGGTGGGAATGCGGTGGAGGAGAATTCGAGGGATTCGGCTTACCAGAGATATGATATTCAACAGGTGGCCAGGTGGATTGAGCAGGTTCTTCCGTTTTCGCTGCTCTTACTCGTTGTGTTCATCCGTCAGCATTTGCAAGGTTTCTTTGTCACTATATGGATATCAGCTGTCATGTATAGGTCGAATGATATTGTCAGGAAGCAGACGGCTCTAAAGGGAGACAGGAAAATCTCCTTTCTTGTGGCCATTGCTGGTGCTTTTATGCTTCATGTGGTTGGTGTTTACTGGTGGTATCGAAATGATGATCTTTTATATCCGCTGGCAATGCTTCCTCCCAAAGCCATACCACCATTCTGGCATGCAATATTCATCATTTTGGTAAATGATACTTTGGTGAGACAGGCAACGATGGCTTTCAAGTGTTTGTTACTTGTATACTACAAGAATGGAAGAGGGCATAACTATCGTCGACAAGGTCAAATGTTAACTGTAGTTGAGTATTCGCTGCTGCTGTACCGTGCCTTATTACCAGCACCTGTTTGGTACAGATTCTTCCTGAACAAAGAATACGGAAGCCTCTTTTCATCACTTATTACAGGACTATACTTGACTTTTAAGTTAACATCTGTTGTTGAGAAGGTCCAATCCTTTTTTGCTTCTATAAGGGCATTATCACGAAAAGATATCCATTATGGGTCCCACGCAACATTGGAGCAGGTAAATGCAGCAGGAGACCTTTGTGCCATCTGCCAGGAGAAGATGCATGCTCCAATCCTATTGCGATGTAAACACATCTTCTGTGAGGACTGTGTCTCCGAATGGTTTGAGAGAGAAAGAACTTGCCCTCTATGCCGGGCAGTGGTAAAACCTGCAGATCTGCGAACGTTTGGGGATGGGTCAACAAGTTTATTTTTCCAGTTTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

463

Amino Acids

50.85

Weight (kDa)

6.56

Isoelectric Point (pI)

49.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 398 - 439 5.9e-06 RING-H2 zinc finger domain
zf-C3HC4_3 PF13920 399 - 442 4.7e-10 Zinc finger, C3HC4 type (RING finger)
zf-RING_2 PF13639 400 - 439 1.9e-10 Ring finger domain
zf-C3HC4 PF00097 401 - 438 3.1e-09 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 401 - 438 6.2e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 401 - 436 7.7e-08 RING-type zinc-finger
zf-RING_5 PF14634 401 - 439 2.7e-07 zinc-RING finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 65
Acc36I ACCTGC 3 cut(s) 535, 1168, 1339
AccB1I GGYRCC 3 cut(s) 314, 427, 439
AccBSI CCGCTC 1 cut(s) 267
AccI GTMKAC 3 cut(s) 139, 897, 931
AccII CGCG 4 cut(s) 193, 238, 263, 336
AclI AACGTT 1 cut(s) 1346
AclWI GGATC 2 cut(s) 60, 314
AcoI YGGCCR 3 cut(s) 239, 528, 705
AcsI RAATTY 1 cut(s) 484
AcyI GRCGYC 3 cut(s) 62, 315, 440
AfaI GTAC 2 cut(s) 977, 1007
AfiI CCNNNNNNNGG 3 cut(s) 23, 237, 1321
AgsI TTSAA 2 cut(s) 521, 880
AjnI CCWGG 2 cut(s) 530, 1212
AluBI AGCT 1 cut(s) 629
AluI AGCT 1 cut(s) 629
Alw26I GTCTC 4 cut(s) 675, 853, 1188, 1279
AlwI GGATC 2 cut(s) 60, 314
AlwNI CAGNNNCTG 1 cut(s) 998
AoxI GGCC 5 cut(s) 239, 255, 453, 528, 705
ApeKI GCWGC 6 cut(s) 91, 209, 562, 967, 970, 1187
ApoI RAATTY 1 cut(s) 484
AspLEI GCGC 6 cut(s) 74, 91, 195, 263, 317, 442
AspS9I GGNCC 3 cut(s) 331, 1102, 1158
AsuC2I CCSGG 6 cut(s) 18, 86, 289, 319, 457, 1316
AsuHPI GGTGA 3 cut(s) 59, 356, 868
AvaII GGWCC 3 cut(s) 331, 1102, 1158
BaeGI GKGCMC 1 cut(s) 423
BaeI ACNNNNGTAYC 2 cut(s) 840, 873
BalI TGGCCA 2 cut(s) 530, 707
BanI GGYRCC 3 cut(s) 314, 427, 439
BarI GAAGNNNNNNTAC 2 cut(s) 998, 1030
BauI CACGAG 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 150
BbvI GCAGC 6 cut(s) 78, 196, 549, 954, 957, 1199
BccI CCATC 5 cut(s) 362, 400, 865, 1214, 1349
BceAI ACGGC 4 cut(s) 209, 270, 372, 684
BcgI CGANNNNNNTGC 4 cut(s) 343, 377, 908, 942
BciT130I CCWGG 2 cut(s) 532, 1214
BcnI CCSGG 6 cut(s) 18, 86, 289, 319, 457, 1316
BcoDI GTCTC 4 cut(s) 675, 853, 1188, 1279
BfmI CTRYAG 2 cut(s) 951, 1332
BfoI RGCGCY 4 cut(s) 75, 92, 318, 443
BfuAI ACCTGC 3 cut(s) 535, 1168, 1339
BglII AGATCT 1 cut(s) 1336
Bme1390I CCNGG 8 cut(s) 18, 86, 289, 319, 457, 532, 1214, 1316
Bme18I GGWCC 3 cut(s) 331, 1102, 1158
BmgT120I GGNCC 3 cut(s) 331, 1102, 1158
BmiI GGNNCC 6 cut(s) 277, 316, 429, 441, 1159, 1160
BmrFI CCNGG 8 cut(s) 18, 86, 289, 319, 457, 532, 1214, 1316
BmsI GCATC 1 cut(s) 1212
BpiI GAAGAC 1 cut(s) 150
BpmI CTGGAG 1 cut(s) 262
BpuMI CCSGG 6 cut(s) 18, 86, 289, 319, 457, 1316
BsaBI GATNNNNATC 1 cut(s) 305
BsaHI GRCGYC 3 cut(s) 62, 315, 440
BsaI GGTCTC 1 cut(s) 1188
BsaJI CCNNGG 6 cut(s) 17, 288, 318, 334, 423, 456
BsaWI WCCGGW 2 cut(s) 102, 134
BsaXI ACNNNNNCTCC 4 cut(s) 363, 393, 1259, 1289
Bsc4I CCNNNNNNNGG 3 cut(s) 23, 237, 1321
Bse1I ACTGG 2 cut(s) 752, 1378
Bse3DI GCAATG 2 cut(s) 708, 792
Bse8I GATNNNNATC 1 cut(s) 305
BseBI CCWGG 2 cut(s) 532, 1214
BseDI CCNNGG 6 cut(s) 17, 288, 318, 334, 423, 456
BseGI GGATG 5 cut(s) 373, 411, 415, 582, 1360
BseJI GATNNNNATC 1 cut(s) 305
BseLI CCNNNNNNNGG 3 cut(s) 23, 237, 1321
BseMI GCAATG 2 cut(s) 708, 792
BseNI ACTGG 2 cut(s) 752, 1378
BseRI GAGGAG 4 cut(s) 54, 57, 387, 494
BseSI GKGCMC 1 cut(s) 423
BseX3I CGGCCG 1 cut(s) 239
BseXI GCAGC 6 cut(s) 78, 196, 549, 954, 957, 1199
BseYI CCCAGC 1 cut(s) 401
BsgI GTGCAG 1 cut(s) 383
Bsh1236I CGCG 4 cut(s) 193, 238, 263, 336
Bsh1285I CGRYCG 2 cut(s) 107, 242
BshFI GGCC 5 cut(s) 241, 257, 455, 530, 707
BshNI GGYRCC 3 cut(s) 314, 427, 439
BsiEI CGRYCG 2 cut(s) 107, 242
BsiSI CCGG 9 cut(s) 17, 86, 103, 135, 288, 318, 443, 456, 1315
BslFI GGGAC 1 cut(s) 1144
BslI CCNNNNNNNGG 3 cut(s) 23, 237, 1321
BsmAI GTCTC 4 cut(s) 675, 853, 1188, 1279
BsmFI GGGAC 1 cut(s) 1144
BsmI GAATGC 2 cut(s) 244, 475
BsnI GGCC 5 cut(s) 241, 257, 455, 530, 707
Bso31I GGTCTC 1 cut(s) 1188
Bsp1286I GDGCHC 1 cut(s) 423
Bsp143I GATC 4 cut(s) 52, 306, 766, 1336
BspANI GGCC 5 cut(s) 241, 257, 455, 530, 707
BspFNI CGCG 4 cut(s) 193, 238, 263, 336
BspLI GGNNCC 6 cut(s) 277, 316, 429, 441, 1159, 1160
BspMAI CTGCAG 1 cut(s) 1336
BspMI ACCTGC 3 cut(s) 535, 1168, 1339
BspPI GGATC 2 cut(s) 60, 314
BspT107I GGYRCC 3 cut(s) 314, 427, 439
BspTNI GGTCTC 1 cut(s) 1188
BsrBI CCGCTC 1 cut(s) 267
BsrDI GCAATG 2 cut(s) 708, 792
BsrI ACTGG 2 cut(s) 752, 1378
BssECI CCNNGG 6 cut(s) 17, 288, 318, 334, 423, 456
BssMI GATC 4 cut(s) 52, 306, 766, 1336
BssNAI GTATAC 2 cut(s) 140, 898
BssNI GRCGYC 3 cut(s) 62, 315, 440
BssSI CACGAG 1 cut(s) 197
BssT1I CCWWGG 1 cut(s) 423
Bst1107I GTATAC 2 cut(s) 140, 898
Bst2BI CACGAG 1 cut(s) 197
Bst2UI CCWGG 2 cut(s) 532, 1214
Bst4CI ACNGT 3 cut(s) 952, 980, 1271
Bst6I CTCTTC 1 cut(s) 907
BstACI GRCGYC 3 cut(s) 62, 315, 440
BstC8I GCNNGC 5 cut(s) 259, 265, 783, 822, 1227
BstDSI CCRYGG 1 cut(s) 334
BstF5I GGATG 5 cut(s) 373, 411, 415, 582, 1360
BstFNI CGCG 4 cut(s) 193, 238, 263, 336
BstH2I RGCGCY 4 cut(s) 75, 92, 318, 443
BstHHI GCGC 6 cut(s) 74, 91, 195, 263, 317, 442
BstKTI GATC 4 cut(s) 55, 309, 769, 1339
BstMAI GTCTC 4 cut(s) 675, 853, 1188, 1279
BstMBI GATC 4 cut(s) 52, 306, 766, 1336
BstMCI CGRYCG 2 cut(s) 107, 242
BstMWI GCNNNNNNNGC 9 cut(s) 201, 221, 267, 273, 279, 427, 787, 872, 1311
BstNI CCWGG 2 cut(s) 532, 1214
BstNSI RCATGY 2 cut(s) 824, 1229
BstSCI CCNGG 8 cut(s) 16, 84, 287, 317, 455, 530, 1212, 1314
BstSFI CTRYAG 2 cut(s) 951, 1332
BstSLI GKGCMC 1 cut(s) 423
BstUI CGCG 4 cut(s) 193, 238, 263, 336
BstV1I GCAGC 6 cut(s) 78, 196, 549, 954, 957, 1199
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 1 cut(s) 1336
BstXI CCANNNNNNTGG 1 cut(s) 816
BstYI RGATCY 1 cut(s) 1336
BstZ17I GTATAC 2 cut(s) 140, 898
BstZI CGGCCG 1 cut(s) 239
BsuRI GGCC 5 cut(s) 241, 257, 455, 530, 707
BtgI CCRYGG 1 cut(s) 334
BtgZI GCGATG 1 cut(s) 1258
BtsCI GGATG 5 cut(s) 373, 411, 415, 582, 1360
BtsI GCAGTG 1 cut(s) 1326
BtsIMutI CAGTG 1 cut(s) 1326
BveI ACCTGC 3 cut(s) 535, 1168, 1339
Cac8I GCNNGC 5 cut(s) 259, 265, 783, 822, 1227
CaiI CAGNNNCTG 1 cut(s) 998
CciNI GCGGCCGC 1 cut(s) 239
CfoI GCGC 6 cut(s) 74, 91, 195, 263, 317, 442
Cfr13I GGNCC 3 cut(s) 331, 1102, 1158
Cfr42I CCGCGG 1 cut(s) 337
CseI GACGC 1 cut(s) 215
Csp6I GTAC 2 cut(s) 976, 1006
CviAII CATG 4 cut(s) 634, 731, 821, 1226
CviQI GTAC 2 cut(s) 976, 1006
DinI GGCGCC 2 cut(s) 316, 441
DpnI GATC 4 cut(s) 54, 308, 768, 1338
DpnII GATC 4 cut(s) 52, 306, 766, 1336
EaeI YGGCCR 3 cut(s) 239, 528, 705
EagI CGGCCG 1 cut(s) 239
Eam1104I CTCTTC 1 cut(s) 907
EarI CTCTTC 1 cut(s) 907
EciI GGCGGA 1 cut(s) 51
EclXI CGGCCG 1 cut(s) 239
Eco130I CCWWGG 1 cut(s) 423
Eco31I GGTCTC 1 cut(s) 1188
Eco32I GATATC 2 cut(s) 624, 1147
Eco47I GGWCC 3 cut(s) 331, 1102, 1158
Eco52I CGGCCG 1 cut(s) 239
EcoO109I RGGNCCY 1 cut(s) 1158
EcoRI GAATTC 1 cut(s) 484
EcoRII CCWGG 2 cut(s) 530, 1212
EcoRV GATATC 2 cut(s) 624, 1147
EcoT14I CCWWGG 1 cut(s) 423
EcoT22I ATGCAT 1 cut(s) 1227
EgeI GGCGCC 2 cut(s) 316, 441
EheI GGCGCC 2 cut(s) 316, 441
ErhI CCWWGG 1 cut(s) 423
FaeI CATG 4 cut(s) 637, 734, 824, 1229
FaqI GGGAC 1 cut(s) 1144
FatI CATG 4 cut(s) 633, 730, 820, 1225
FauI CCCGC 1 cut(s) 329
FblI GTMKAC 3 cut(s) 139, 897, 931
FokI GGATG 5 cut(s) 380, 418, 422, 569, 1367
GlaI GCGC 6 cut(s) 73, 90, 194, 262, 316, 441
GsaI CCCAGC 1 cut(s) 405
GsuI CTGGAG 1 cut(s) 262
HaeII RGCGCY 4 cut(s) 75, 92, 318, 443
HaeIII GGCC 5 cut(s) 241, 257, 455, 530, 707
HapII CCGG 9 cut(s) 17, 86, 103, 135, 288, 318, 443, 456, 1315
HgaI GACGC 1 cut(s) 215
HhaI GCGC 6 cut(s) 74, 91, 195, 263, 317, 442
Hin1I GRCGYC 3 cut(s) 62, 315, 440
Hin1II CATG 4 cut(s) 637, 734, 824, 1229
Hin6I GCGC 6 cut(s) 72, 89, 193, 261, 315, 440
HinP1I GCGC 6 cut(s) 72, 89, 193, 261, 315, 440
HincII GTYRAC 5 cut(s) 220, 932, 948, 1083, 1362
HindII GTYRAC 5 cut(s) 220, 932, 948, 1083, 1362
HinfI GANTC 5 cut(s) 96, 233, 301, 494, 1011
HpaI GTTAAC 2 cut(s) 948, 1083
HpaII CCGG 9 cut(s) 17, 86, 103, 135, 288, 318, 443, 456, 1315
HphI GGTGA 3 cut(s) 59, 356, 868
Hpy166II GTNNAC 9 cut(s) 140, 220, 745, 898, 932, 948, 1083, 1250, 1362
Hpy188I TCNGA 4 cut(s) 57, 252, 306, 1279
Hpy188III TCNNGA 3 cut(s) 658, 1018, 1137
Hpy8I GTNNAC 9 cut(s) 140, 220, 745, 898, 932, 948, 1083, 1250, 1362
HpyAV CCTTC 1 cut(s) 1093
HpyCH4III ACNGT 3 cut(s) 952, 980, 1271
HpyCH4IV ACGT 2 cut(s) 62, 1346
HpyCH4V TGCA 7 cut(s) 79, 364, 598, 824, 1187, 1225, 1334
HpyF10VI GCNNNNNNNGC 9 cut(s) 201, 221, 267, 273, 279, 427, 787, 872, 1311
HpySE526I ACGT 2 cut(s) 62, 1346
Hsp92I GRCGYC 3 cut(s) 62, 315, 440
Hsp92II CATG 4 cut(s) 637, 734, 824, 1229
HspAI GCGC 6 cut(s) 72, 89, 193, 261, 315, 440
KasI GGCGCC 2 cut(s) 314, 439
KflI GGGWCCC 1 cut(s) 1158
KspAI GTTAAC 2 cut(s) 948, 1083
KspI CCGCGG 1 cut(s) 337
Kzo9I GATC 4 cut(s) 52, 306, 766, 1336
LmnI GCTCC 4 cut(s) 281, 322, 1174, 1234
Lsp1109I GCAGC 6 cut(s) 78, 196, 549, 954, 957, 1199
LweI GCATC 1 cut(s) 1212
MaeII ACGT 2 cut(s) 62, 1346
MaeIII GTNAC 2 cut(s) 610, 888
MalI GATC 4 cut(s) 54, 308, 768, 1338
MbiI CCGCTC 1 cut(s) 267
MboI GATC 4 cut(s) 52, 306, 766, 1336
MboII GAAGA 8 cut(s) 91, 150, 153, 542, 924, 1006, 1231, 1249
MflI RGATCY 1 cut(s) 1336
MhlI GDGCHC 1 cut(s) 423
MlsI TGGCCA 2 cut(s) 530, 707
MluCI AATT 2 cut(s) 80, 484
MluNI TGGCCA 2 cut(s) 530, 707
Mly113I GGCGCC 2 cut(s) 315, 440
MmeI TCCRAC 2 cut(s) 275, 369
Mox20I TGGCCA 2 cut(s) 530, 707
Mph1103I ATGCAT 1 cut(s) 1227
MscI TGGCCA 2 cut(s) 530, 707
MseI TTAA 3 cut(s) 947, 1077, 1082
Msp20I TGGCCA 2 cut(s) 530, 707
MspA1I CMGCKG 3 cut(s) 336, 629, 781
MspI CCGG 9 cut(s) 17, 86, 103, 135, 288, 318, 443, 456, 1315
MspR9I CCNGG 8 cut(s) 18, 86, 289, 319, 457, 532, 1214, 1316
Mva1269I GAATGC 2 cut(s) 244, 475
MvaI CCWGG 2 cut(s) 532, 1214
MvnI CGCG 4 cut(s) 193, 238, 263, 336
MwoI GCNNNNNNNGC 9 cut(s) 201, 221, 267, 273, 279, 427, 787, 872, 1311
NarI GGCGCC 2 cut(s) 315, 440
NciI CCSGG 6 cut(s) 18, 86, 289, 319, 457, 1316
NdeII GATC 4 cut(s) 52, 306, 766, 1336
NlaIII CATG 4 cut(s) 637, 734, 824, 1229
NlaIV GGNNCC 6 cut(s) 277, 316, 429, 441, 1159, 1160
NmuCI GTSAC 1 cut(s) 610
NotI GCGGCCGC 1 cut(s) 239
NsiI ATGCAT 1 cut(s) 1227
NspI RCATGY 2 cut(s) 824, 1229
PaeI GCATGC 2 cut(s) 824, 1229
PcsI WCGNNNNNNNCGW 7 cut(s) 161, 170, 173, 179, 182, 228, 260
PctI GAATGC 2 cut(s) 244, 475
PfeI GAWTC 5 cut(s) 96, 233, 301, 494, 1011
PflFI GACNNNGTC 3 cut(s) 61, 936, 1271
PluTI GGCGCC 2 cut(s) 318, 443
PpuMI RGGWCCY 1 cut(s) 1158
Psp1406I AACGTT 1 cut(s) 1346
Psp5II RGGWCCY 1 cut(s) 1158
Psp6I CCWGG 2 cut(s) 530, 1212
PspFI CCCAGC 1 cut(s) 401
PspGI CCWGG 2 cut(s) 530, 1212
PspN4I GGNNCC 6 cut(s) 277, 316, 429, 441, 1159, 1160
PspPI GGNCC 3 cut(s) 331, 1102, 1158
PspPPI RGGWCCY 1 cut(s) 1158
PsrI GAACNNNNNNTAC 2 cut(s) 1013, 1045
PstI CTGCAG 1 cut(s) 1336
PstNI CAGNNNCTG 1 cut(s) 998
PsuI RGATCY 1 cut(s) 1336
PsyI GACNNNGTC 3 cut(s) 61, 936, 1271
PvuII CAGCTG 1 cut(s) 629
RsaI GTAC 2 cut(s) 977, 1007
RsaNI GTAC 2 cut(s) 976, 1006
SacII CCGCGG 1 cut(s) 337
SalI GTCGAC 1 cut(s) 930
SaqAI TTAA 3 cut(s) 947, 1077, 1082
Sau3AI GATC 4 cut(s) 52, 306, 766, 1336
Sau96I GGNCC 3 cut(s) 331, 1102, 1158
ScrFI CCNGG 8 cut(s) 18, 86, 289, 319, 457, 532, 1214, 1316
SduI GDGCHC 1 cut(s) 423
SfaNI GCATC 1 cut(s) 1212
SfcI CTRYAG 2 cut(s) 951, 1332
SfoI GGCGCC 2 cut(s) 316, 441
Sfr303I CCGCGG 1 cut(s) 337
SgrBI CCGCGG 1 cut(s) 337
SinI GGWCC 3 cut(s) 331, 1102, 1158
SphI GCATGC 2 cut(s) 824, 1229
Sse9I AATT 2 cut(s) 80, 484
SspDI GGCGCC 2 cut(s) 314, 439
SspI AATATT 1 cut(s) 828
StyD4I CCNGG 8 cut(s) 16, 84, 287, 317, 455, 530, 1212, 1314
StyI CCWWGG 1 cut(s) 423
TaaI ACNGT 3 cut(s) 952, 980, 1271
TaiI ACGT 2 cut(s) 65, 1349
TaqI TCGA 5 cut(s) 299, 488, 644, 757, 931
TasI AATT 2 cut(s) 80, 484
TauI GCSGC 8 cut(s) 16, 112, 215, 241, 244, 270, 273, 276
TfiI GAWTC 5 cut(s) 96, 233, 301, 494, 1011
Tru1I TTAA 3 cut(s) 947, 1077, 1082
Tru9I TTAA 3 cut(s) 947, 1077, 1082
TscAI CASTG 1 cut(s) 1326
TseFI GTSAC 1 cut(s) 610
TseI GCWGC 6 cut(s) 91, 209, 562, 967, 970, 1187
Tsp45I GTSAC 1 cut(s) 610
TspDTI ATGAA 4 cut(s) 571, 719, 820, 1035
TspGWI ACGGA 4 cut(s) 423, 543, 575, 1047
TspRI CASTG 1 cut(s) 1326
Tth111I GACNNNGTC 3 cut(s) 61, 936, 1271
VpaK11BI GGWCC 3 cut(s) 331, 1102, 1158
XapI RAATTY 1 cut(s) 484
XceI RCATGY 2 cut(s) 824, 1229
XcmI CCANNNNNNNNNTGG 1 cut(s) 999
XmiI GTMKAC 3 cut(s) 139, 897, 931
ZraI GACGTC 1 cut(s) 63
Zsp2I ATGCAT 1 cut(s) 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.