RchiOBHm_Chr3g0459771

RING finger and transmembrane domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0003923
Physical Location & Seq
Reverse (-)
8138575 .. 8144058
5484 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42636

Sequence Viewer

Length: 1416 bp
ATGGAAGCGCCAGGTGGCAATCATCTGGACTCGTACAGAGCTCCGGTTTCGAGCAATAGTAGCTCTAGAAGATATGGAATGCTATCTGCTTCCAATTTTATTCAGGCACCACTGTCTGCCTTGTTGGAGTACTCGGGCCTTCTGCGCGGCCGGTCCAGTCACCAAGAAGCCGAGTCTTTGATTGGGGGACGTAGCGCTGCCGCGTTCAGGGAGCACCATCACGGTCAGGTGGATCAATCGAGCAATGATGGGGAGGTTTCGATTAGGATAATTGGTGCAGGGGAGCAAGAGCATGATAGGGAAGGGGGTGGTTTAGTAGTTGGACAGTTGAGGGAGAGTAGTCTTCTGCAAAATGATGTTTCCGGACAGCCAATAGCTAGGGTGGGCTCTGTTACAGTGGTATCGGAGGAGGGTCAGGGAGATGGTAGGACGGATGTTGGTTCTGGAGACGGCATGTCACAATCGATGAATGGAAGTGCTGATGGAGAAGCTGGTGATGGTGCTGGGGCTAATGGCAGGGATTCTTCGTACCAGAGATATGATATTCAGCAGGCAGCTAGGTGGATTGAGCAGGTCCTGCCCTTTTCCTTGCTTCTATTGGTGGTCTTCATTCGCCAGCATTTGCAAGGTTTCTTTGTTACTATCTGGATTGCTGCTGTTATGTTTAAGTCGAATGATATCCTAAGGAAACAGACAGCTCTGAAGGGAGAGAGGAAAATCTCTGTTCTAGTAGGCATCTCTATTGCATTCGCAGTTCATGTGATTGGTGTTTACTGGTGGTATCAGAATGATGATCTTCTGTACCCATTAGTTATGCTTCCTCCCAAAGTTATACCACCTTTCTGGCATGCTGTTTTTATCATCATGGTTAATGATACCTTGGTCCGGCAGGCAGCAATGGTGATCAAGTGTATTCTATTAATGTACTACAAGAACAGCAGAGGACGTAACTATCGTAAGCAGGGTCAAATGCTTACATTGGTTGAGTATCTACTTCTGTTGTACCGGGCCTTGTTACCAACACCAGTGTGGTATCGTTTCTTCTTGAACAAAGAATATGGTAGTCTCTTTTCTTCACTAATGACAGGGTTATATTTGACCTTCAAGCTTACGTCTGTTGTTGAGAAGGTACAATCTTTCTTTGCTGCATTGAAGGCCTTGTCTCGTAAAGAGGTTCACTATGGGGCGTATGCAACATCAGAGCAGGTCAGTGCAGCTGGCGATCTATGTGCCATCTGCCAGGAGAAAATGCATGCTCCTATCTTGCTTCGTTGTAAACACATCTTCTGTGAGGACTGTGTATCAGAGTGGTTTGAGAGGGAACGAACCTGCCCGTTGTGCAGGGCTTTGGTAAAACCTGCAGATCTTAGATCGTTTGGCGATGGATCAACGAGTTTGTTCTTCCAGCTGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3 zf-RING_2

Protein Analysis

471

Amino Acids

52.32

Weight (kDa)

7.63

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 408 - 451 6.2e-10 Zinc finger, C3HC4 type (RING finger)
zf-RING_2 PF13639 409 - 448 1.9e-10 Ring finger domain
zf-C3HC4 PF00097 410 - 447 3.2e-09 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 410 - 447 6.4e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 410 - 445 7.9e-08 RING-type zinc-finger
zf-RING_5 PF14634 410 - 448 2.7e-07 zinc-RING finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 562, 1195, 1337, 1366
AccB1I GGYRCC 1 cut(s) 106
AccII CGCG 2 cut(s) 147, 203
AccIII TCCGGA 1 cut(s) 362
AciI CCGC 2 cut(s) 147, 201
AclWI GGATC 2 cut(s) 240, 1393
AcoI YGGCCR 1 cut(s) 148
AcuI CTGAAG 1 cut(s) 722
AfaI GTAC 7 cut(s) 35, 131, 530, 803, 926, 1004, 1131
AfeI AGCGCT 1 cut(s) 196
AfiI CCNNNNNNNGG 2 cut(s) 207, 885
AgsI TTSAA 3 cut(s) 1048, 1105, 1153
AhdI GACNNNNNGTC 1 cut(s) 454
AjnI CCWGG 2 cut(s) 10, 1239
AleI CACNNNNGTG 1 cut(s) 1027
AluBI AGCT 9 cut(s) 41, 63, 377, 491, 557, 698, 1108, 1217, 1408
AluI AGCT 9 cut(s) 41, 63, 377, 491, 557, 698, 1108, 1217, 1408
Alw21I GWGCWC 2 cut(s) 43, 216
Alw26I GTCTC 3 cut(s) 441, 1070, 1167
AlwI GGATC 2 cut(s) 240, 1393
AlwNI CAGNNNCTG 1 cut(s) 577
Ama87I CYCGRG 1 cut(s) 133
Aor13HI TCCGGA 1 cut(s) 362
Aor51HI AGCGCT 1 cut(s) 196
AoxI GGCC 4 cut(s) 136, 148, 1008, 1155
ApeKI GCWGC 6 cut(s) 197, 554, 653, 893, 1145, 1214
AseI ATTAAT 1 cut(s) 920
AspLEI GCGC 3 cut(s) 10, 147, 197
AspS9I GGNCC 5 cut(s) 136, 153, 574, 883, 1008
AsuC2I CCSGG 1 cut(s) 1007
AsuHPI GGTGA 3 cut(s) 152, 506, 913
AvaI CYCGRG 1 cut(s) 133
AvaII GGWCC 3 cut(s) 153, 574, 883
AxyI CCTNAGG 1 cut(s) 683
BaeI ACNNNNGTAYC 4 cut(s) 384, 417, 867, 900
BanI GGYRCC 1 cut(s) 106
BanII GRGCYC 2 cut(s) 43, 389
BarI GAAGNNNNNNTAC 2 cut(s) 1025, 1057
BbsI GAAGAC 2 cut(s) 335, 598
Bbv12I GWGCWC 2 cut(s) 43, 216
BbvI GCAGC 6 cut(s) 184, 566, 640, 905, 1132, 1226
BccI CCATC 7 cut(s) 225, 242, 416, 476, 491, 1241, 1376
BceAI ACGGC 1 cut(s) 466
BcgI CGANNNNNNTGC 2 cut(s) 1211, 1245
BciT130I CCWGG 2 cut(s) 12, 1241
BclI TGATCA 1 cut(s) 903
BcnI CCSGG 1 cut(s) 1007
BcoDI GTCTC 3 cut(s) 441, 1070, 1167
BfaI CTAG 4 cut(s) 66, 378, 558, 728
BfmI CTRYAG 1 cut(s) 1359
BfoI RGCGCY 2 cut(s) 11, 198
BfuAI ACCTGC 4 cut(s) 562, 1195, 1337, 1366
BglII AGATCT 1 cut(s) 1363
BisI GCNGC 8 cut(s) 148, 198, 201, 555, 654, 894, 1146, 1215
BlsI GCNGC 8 cut(s) 149, 199, 202, 556, 655, 895, 1147, 1216
BmcAI AGTACT 1 cut(s) 131
Bme1390I CCNGG 3 cut(s) 12, 1007, 1241
Bme18I GGWCC 3 cut(s) 153, 574, 883
BmeRI GACNNNNNGTC 1 cut(s) 454
BmeT110I CYCGRG 1 cut(s) 133
BmgT120I GGNCC 5 cut(s) 136, 153, 574, 883, 1008
BmiI GGNNCC 1 cut(s) 108
BmrFI CCNGG 3 cut(s) 12, 1007, 1241
BmsI GCATC 1 cut(s) 744
BpiI GAAGAC 2 cut(s) 335, 598
BpmI CTGGAG 1 cut(s) 465
BpuMI CCSGG 1 cut(s) 1007
Bsa29I ATCGAT 1 cut(s) 464
BsaJI CCNNGG 1 cut(s) 879
BsaWI WCCGGW 2 cut(s) 43, 362
Bsc4I CCNNNNNNNGG 2 cut(s) 207, 885
Bse118I RCCGGY 1 cut(s) 150
Bse1I ACTGG 3 cut(s) 156, 779, 1025
Bse21I CCTNAGG 1 cut(s) 683
Bse3DI GCAATG 2 cut(s) 250, 903
BseAI TCCGGA 1 cut(s) 362
BseBI CCWGG 2 cut(s) 12, 1241
BseCI ATCGAT 1 cut(s) 464
BseDI CCNNGG 1 cut(s) 879
BseGI GGATG 1 cut(s) 439
BseLI CCNNNNNNNGG 2 cut(s) 207, 885
BseMI GCAATG 2 cut(s) 250, 903
BseNI ACTGG 3 cut(s) 156, 779, 1025
BseRI GAGGAG 1 cut(s) 422
BseX3I CGGCCG 1 cut(s) 148
BseXI GCAGC 6 cut(s) 184, 566, 640, 905, 1132, 1226
BseYI CCCAGC 1 cut(s) 503
BsgI GTGCAG 3 cut(s) 297, 1233, 1360
Bsh1236I CGCG 2 cut(s) 147, 203
Bsh1285I CGRYCG 1 cut(s) 151
BshFI GGCC 4 cut(s) 138, 150, 1010, 1157
BshNI GGYRCC 1 cut(s) 106
BshVI ATCGAT 1 cut(s) 464
BsiEI CGRYCG 1 cut(s) 151
BsiHKAI GWGCWC 2 cut(s) 43, 216
BsiHKCI CYCGRG 1 cut(s) 133
BsiSI CCGG 5 cut(s) 44, 151, 363, 886, 1006
BslFI GGGAC 1 cut(s) 201
BslI CCNNNNNNNGG 2 cut(s) 207, 885
BsmAI GTCTC 3 cut(s) 441, 1070, 1167
BsmBI CGTCTC 1 cut(s) 441
BsmFI GGGAC 1 cut(s) 201
BsmI GAATGC 2 cut(s) 84, 746
BsnI GGCC 4 cut(s) 138, 150, 1010, 1157
BsoBI CYCGRG 1 cut(s) 133
Bsp1286I GDGCHC 3 cut(s) 43, 216, 389
Bsp13I TCCGGA 1 cut(s) 362
Bsp143I GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
BspACI CCGC 2 cut(s) 147, 201
BspANI GGCC 4 cut(s) 138, 150, 1010, 1157
BspDI ATCGAT 1 cut(s) 464
BspEI TCCGGA 1 cut(s) 362
BspFNI CGCG 2 cut(s) 147, 203
BspLI GGNNCC 1 cut(s) 108
BspMAI CTGCAG 1 cut(s) 1363
BspMI ACCTGC 4 cut(s) 562, 1195, 1337, 1366
BspPI GGATC 2 cut(s) 240, 1393
BspT107I GGYRCC 1 cut(s) 106
BsrDI GCAATG 2 cut(s) 250, 903
BsrFI RCCGGY 1 cut(s) 150
BsrI ACTGG 3 cut(s) 156, 779, 1025
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 1 cut(s) 879
BssMI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
BssT1I CCWWGG 1 cut(s) 879
Bst2UI CCWGG 2 cut(s) 12, 1241
Bst4CI ACNGT 5 cut(s) 114, 224, 327, 397, 1298
BstAPI GCANNNNNTGC 1 cut(s) 577
BstC8I GCNNGC 6 cut(s) 552, 617, 849, 891, 1219, 1254
BstDEI CTNAG 2 cut(s) 683, 1367
BstF5I GGATG 1 cut(s) 439
BstFNI CGCG 2 cut(s) 147, 203
BstH2I RGCGCY 2 cut(s) 11, 198
BstHHI GCGC 3 cut(s) 10, 147, 197
BstKTI GATC 7 cut(s) 235, 796, 906, 1225, 1366, 1373, 1388
BstMAI GTCTC 3 cut(s) 441, 1070, 1167
BstMBI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
BstMCI CGRYCG 1 cut(s) 151
BstMWI GCNNNNNNNGC 5 cut(s) 60, 144, 577, 1154, 1338
BstNI CCWGG 2 cut(s) 12, 1241
BstNSI RCATGY 3 cut(s) 457, 851, 1256
BstSCI CCNGG 3 cut(s) 10, 1005, 1239
BstSFI CTRYAG 1 cut(s) 1359
BstUI CGCG 2 cut(s) 147, 203
BstV1I GCAGC 6 cut(s) 184, 566, 640, 905, 1132, 1226
BstV2I GAAGAC 2 cut(s) 335, 598
BstX2I RGATCY 1 cut(s) 1363
BstXI CCANNNNNNTGG 1 cut(s) 843
BstYI RGATCY 1 cut(s) 1363
BstZI CGGCCG 1 cut(s) 148
Bsu15I ATCGAT 1 cut(s) 464
Bsu36I CCTNAGG 1 cut(s) 683
BsuRI GGCC 4 cut(s) 138, 150, 1010, 1157
BsuTUI ATCGAT 1 cut(s) 464
BtgZI GCGATG 1 cut(s) 1395
BtsCI GGATG 1 cut(s) 439
BtsIMutI CAGTG 4 cut(s) 110, 402, 1032, 1216
BveI ACCTGC 4 cut(s) 562, 1195, 1337, 1366
Cac8I GCNNGC 6 cut(s) 552, 617, 849, 891, 1219, 1254
CaiI CAGNNNCTG 1 cut(s) 577
CfoI GCGC 3 cut(s) 10, 147, 197
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 5 cut(s) 136, 153, 574, 883, 1008
ClaI ATCGAT 1 cut(s) 464
Csp6I GTAC 7 cut(s) 34, 130, 529, 802, 925, 1003, 1130
CviAII CATG 6 cut(s) 293, 454, 758, 848, 865, 1253
CviQI GTAC 7 cut(s) 34, 130, 529, 802, 925, 1003, 1130
DdeI CTNAG 2 cut(s) 683, 1367
DpnI GATC 7 cut(s) 234, 795, 905, 1224, 1365, 1372, 1387
DpnII GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
DriI GACNNNNNGTC 1 cut(s) 454
EaeI YGGCCR 1 cut(s) 148
EagI CGGCCG 1 cut(s) 148
Eam1105I GACNNNNNGTC 1 cut(s) 454
Ecl136II GAGCTC 1 cut(s) 41
EclXI CGGCCG 1 cut(s) 148
Eco130I CCWWGG 1 cut(s) 879
Eco147I AGGCCT 1 cut(s) 1157
Eco24I GRGCYC 2 cut(s) 43, 389
Eco32I GATATC 1 cut(s) 679
Eco47I GGWCC 3 cut(s) 153, 574, 883
Eco47III AGCGCT 1 cut(s) 196
Eco52I CGGCCG 1 cut(s) 148
Eco53kI GAGCTC 1 cut(s) 41
Eco57I CTGAAG 1 cut(s) 722
Eco81I CCTNAGG 1 cut(s) 683
Eco88I CYCGRG 1 cut(s) 133
EcoICRI GAGCTC 1 cut(s) 41
EcoO109I RGGNCCY 1 cut(s) 574
EcoRII CCWGG 2 cut(s) 10, 1239
EcoRV GATATC 1 cut(s) 679
EcoT14I CCWWGG 1 cut(s) 879
EcoT22I ATGCAT 1 cut(s) 1254
EcoT38I GRGCYC 2 cut(s) 43, 389
ErhI CCWWGG 1 cut(s) 879
Esp3I CGTCTC 1 cut(s) 441
FaeI CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
FaqI GGGAC 1 cut(s) 201
FatI CATG 6 cut(s) 292, 453, 757, 847, 864, 1252
FbaI TGATCA 1 cut(s) 903
Fnu4HI GCNGC 8 cut(s) 148, 198, 201, 555, 654, 894, 1146, 1215
FokI GGATG 1 cut(s) 446
FriOI GRGCYC 2 cut(s) 43, 389
Fsp4HI GCNGC 8 cut(s) 148, 198, 201, 555, 654, 894, 1146, 1215
FspBI CTAG 4 cut(s) 66, 378, 558, 728
GlaI GCGC 3 cut(s) 9, 146, 196
GluI GCNGC 8 cut(s) 148, 198, 201, 555, 654, 894, 1146, 1215
GsaI CCCAGC 1 cut(s) 507
GsuI CTGGAG 1 cut(s) 465
HaeII RGCGCY 2 cut(s) 11, 198
HaeIII GGCC 4 cut(s) 138, 150, 1010, 1157
HapII CCGG 5 cut(s) 44, 151, 363, 886, 1006
HhaI GCGC 3 cut(s) 10, 147, 197
Hin1II CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
Hin6I GCGC 3 cut(s) 8, 145, 195
HinP1I GCGC 3 cut(s) 8, 145, 195
HindIII AAGCTT 1 cut(s) 1106
HinfI GANTC 3 cut(s) 29, 173, 521
HpaII CCGG 5 cut(s) 44, 151, 363, 886, 1006
HphI GGTGA 3 cut(s) 152, 506, 913
Hpy166II GTNNAC 3 cut(s) 772, 1177, 1277
Hpy188I TCNGA 5 cut(s) 406, 702, 786, 1201, 1306
Hpy188III TCNNGA 6 cut(s) 26, 66, 363, 444, 646, 1045
Hpy8I GTNNAC 3 cut(s) 772, 1177, 1277
HpyAV CCTTC 6 cut(s) 149, 296, 697, 1111, 1120, 1147
HpyCH4III ACNGT 5 cut(s) 114, 224, 327, 397, 1298
HpyCH4IV ACGT 3 cut(s) 190, 946, 1112
HpyF10VI GCNNNNNNNGC 5 cut(s) 60, 144, 577, 1154, 1338
HpyF3I CTNAG 2 cut(s) 683, 1367
HpySE526I ACGT 3 cut(s) 190, 946, 1112
Hsp92II CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
HspAI GCGC 3 cut(s) 8, 145, 195
Kpn2I TCCGGA 1 cut(s) 362
Ksp22I TGATCA 1 cut(s) 903
Kzo9I GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
LmnI GCTCC 4 cut(s) 46, 211, 283, 1261
Lsp1109I GCAGC 6 cut(s) 184, 566, 640, 905, 1132, 1226
LweI GCATC 1 cut(s) 744
MaeI CTAG 4 cut(s) 66, 378, 558, 728
MaeII ACGT 3 cut(s) 190, 946, 1112
MaeIII GTNAC 6 cut(s) 158, 391, 456, 637, 947, 1014
MalI GATC 7 cut(s) 234, 795, 905, 1224, 1365, 1372, 1387
MboI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
MboII GAAGA 9 cut(s) 81, 335, 516, 598, 788, 1033, 1065, 1276, 1393
MflI RGATCY 1 cut(s) 1363
MhlI GDGCHC 3 cut(s) 43, 216, 389
MluCI AATT 2 cut(s) 94, 270
MlyI GAGTC 2 cut(s) 23, 182
MmeI TCCRAC 2 cut(s) 105, 301
Mph1103I ATGCAT 1 cut(s) 1254
MroI TCCGGA 1 cut(s) 362
MseI TTAA 4 cut(s) 666, 870, 920, 1414
MslI CAYNNNNRTG 1 cut(s) 1027
MspA1I CMGCKG 2 cut(s) 1217, 1408
MspI CCGG 5 cut(s) 44, 151, 363, 886, 1006
MspR9I CCNGG 3 cut(s) 12, 1007, 1241
Mva1269I GAATGC 2 cut(s) 84, 746
MvaI CCWGG 2 cut(s) 12, 1241
MvnI CGCG 2 cut(s) 147, 203
MwoI GCNNNNNNNGC 5 cut(s) 60, 144, 577, 1154, 1338
NciI CCSGG 1 cut(s) 1007
NdeII GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
NlaIII CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
NlaIV GGNNCC 1 cut(s) 108
NmeAIII GCCGAG 1 cut(s) 196
NmuCI GTSAC 2 cut(s) 158, 456
NsiI ATGCAT 1 cut(s) 1254
NspI RCATGY 3 cut(s) 457, 851, 1256
OliI CACNNNNGTG 1 cut(s) 1027
PaeI GCATGC 2 cut(s) 851, 1256
PceI AGGCCT 1 cut(s) 1157
PcsI WCGNNNNNNNCGW 1 cut(s) 952
PctI GAATGC 2 cut(s) 84, 746
PfeI GAWTC 1 cut(s) 521
PkrI GCNGC 8 cut(s) 149, 199, 202, 556, 655, 895, 1147, 1216
PleI GAGTC 2 cut(s) 23, 181
PpsI GAGTC 2 cut(s) 23, 181
PpuMI RGGWCCY 1 cut(s) 574
PshBI ATTAAT 1 cut(s) 920
Psp124BI GAGCTC 1 cut(s) 43
Psp5II RGGWCCY 1 cut(s) 574
Psp6I CCWGG 2 cut(s) 10, 1239
PspFI CCCAGC 1 cut(s) 503
PspGI CCWGG 2 cut(s) 10, 1239
PspN4I GGNNCC 1 cut(s) 108
PspPI GGNCC 5 cut(s) 136, 153, 574, 883, 1008
PspPPI RGGWCCY 1 cut(s) 574
PstI CTGCAG 1 cut(s) 1363
PstNI CAGNNNCTG 1 cut(s) 577
PsuI RGATCY 1 cut(s) 1363
PvuII CAGCTG 2 cut(s) 1217, 1408
RsaI GTAC 7 cut(s) 35, 131, 530, 803, 926, 1004, 1131
RsaNI GTAC 7 cut(s) 34, 130, 529, 802, 925, 1003, 1130
RseI CAYNNNNRTG 1 cut(s) 1027
SacI GAGCTC 1 cut(s) 43
SaqAI TTAA 4 cut(s) 666, 870, 920, 1414
SatI GCNGC 8 cut(s) 148, 198, 201, 555, 654, 894, 1146, 1215
Sau3AI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
Sau96I GGNCC 5 cut(s) 136, 153, 574, 883, 1008
ScaI AGTACT 1 cut(s) 131
SchI GAGTC 2 cut(s) 23, 182
ScrFI CCNGG 3 cut(s) 12, 1007, 1241
SduI GDGCHC 3 cut(s) 43, 216, 389
SfaNI GCATC 1 cut(s) 744
SfcI CTRYAG 1 cut(s) 1359
SinI GGWCC 3 cut(s) 153, 574, 883
SmiMI CAYNNNNRTG 1 cut(s) 1027
SphI GCATGC 2 cut(s) 851, 1256
Sse9I AATT 2 cut(s) 94, 270
SseBI AGGCCT 1 cut(s) 1157
SsiI CCGC 2 cut(s) 147, 201
SspMI CTAG 4 cut(s) 66, 378, 558, 728
SstI GAGCTC 1 cut(s) 43
StuI AGGCCT 1 cut(s) 1157
StyD4I CCNGG 3 cut(s) 10, 1005, 1239
StyI CCWWGG 1 cut(s) 879
TaaI ACNGT 5 cut(s) 114, 224, 327, 397, 1298
TaiI ACGT 3 cut(s) 193, 949, 1115
TaqI TCGA 5 cut(s) 50, 239, 260, 464, 671
TasI AATT 2 cut(s) 94, 270
TatI WGTACW 2 cut(s) 129, 924
TauI GCSGC 2 cut(s) 150, 203
TfiI GAWTC 1 cut(s) 521
Tru1I TTAA 4 cut(s) 666, 870, 920, 1414
Tru9I TTAA 4 cut(s) 666, 870, 920, 1414
TscAI CASTG 4 cut(s) 117, 402, 1032, 1216
TseFI GTSAC 2 cut(s) 158, 456
TseI GCWGC 6 cut(s) 197, 554, 653, 893, 1145, 1214
Tsp45I GTSAC 2 cut(s) 158, 456
TspDTI ATGAA 3 cut(s) 482, 598, 746
TspGWI ACGGA 1 cut(s) 446
TspRI CASTG 4 cut(s) 117, 402, 1032, 1216
VpaK11BI GGWCC 3 cut(s) 153, 574, 883
VspI ATTAAT 1 cut(s) 920
XbaI TCTAGA 1 cut(s) 65
XceI RCATGY 3 cut(s) 457, 851, 1256
XcmI CCANNNNNNNNNTGG 1 cut(s) 1026
XspI CTAG 4 cut(s) 66, 378, 558, 728
ZrmI AGTACT 1 cut(s) 131
Zsp2I ATGCAT 1 cut(s) 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.