Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003923

Physical Location & Seq

Genomic Coordinates Forward (+)

20295103 .. 20298710

Gene Structure 3608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g17990.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGAAGGGTCGGGTGGCAATCTTGACTCGTTTAGAGCTTCTCCGGGAAGCAGTAGTAATAGGAGATATGGGGTGTTATCGGCTTCCAATATCATTCGGGCGCCAATTTCTACCTTATTGGAGTACTCAGGTATTCTCCGCGGCCGCTCTAATCACCAAGAAGCTGAGTCTTTGATTAACGGGCGTAGCGCTGCTGCGTTCCGGGATCACCATCATAGTCAGCTAGACCAATTACCAACGACAAGCAATGATGGGGAGGTTTCTATTAGGATAATTGGTGCAGGGGAACAGGAGCATGATAGGGATGGACCTGGGATAGTATCTGGACGGCTGAGGGAAGTTACTGTACCGCCAAATGATGTTTCTGCACCACCAATGGCTGGGGTGGCTTCTGTAGCATTGGGAACGGAGGATGTGGGTCAGACAGATGGCAGAACAGATCGTACTACGGGAGAGGGCAGTCCCCAATTGTTAAATGGAACTGCTGATGGAGAAGGAGGTGATGGAACTGGGGCTAATGGCAGGGATTCTTCTTATCAGAGATATGACATTCAGCAGGCTGCTAGGGGTATTGAACAAGTCCTGCCCTTTTCCTTGCTTCTATTGGTGGTCTTCATCCGCCAGCATTTGCAAGGTTTCTTTGTTACAATTTGGATTGCTGCTGTTATGTTCAAGTCAAATGATATATTAAGGAAACAGACAGCTTTGAAGGGAGAGAGGAAAATCACGGTTCTAATGGGCATCTCCCTTGCATTCGCATTGCATGTGGTTGGTGTTTACTGGTGGTTCCAGAATGACGATCTTTTGTACCCATTAATTATGCTTCCTCCTAAAGTTATACCACCCTTCTGGCATGCTGTTTTCATCATCATGGTGAATGACACCTTGGTCCGTCAGGCAGCAATGGTGCTGAAGTGTTCTATATTAATGTACTACAAAAACAGTAGAGGCAGAAACTATCGTAAGCAGGGTCAAATGCTTACACTGGTTGAGTATCTACTGCTCTTGTACCGGGCCTTGTTGCCAACACCAGTGTGGTACCGGTTCTTCTTGAACAAAGAATATGGGAGTCTCTTTTCGTCATTAATGACAGGGTTATATTTGACTTTCAAGCTCACATCTGTTGTCGAGAAGGTGCAATCCTTCTTTGCTGCACTGAAGGCATTGTCACGAAAAGAGGTGCACTATGGGGCATATGCAACTTCAGAACAGGTCAATGCAGCAGGCGATCTATGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTTCGATGTAAACACATCTTTTGCGAGGACTGCGTATCAGAGTGGTTTGAGAGGGAACGGACATGTCCGTTGTGCAGAGCTCTGGTAAAATCTGCAGATCTAAGATCATTCGGCGATGGATCAACGAGTTTGTATTTCCAGCTGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3 zf-RING_2

Protein Analysis

474

Amino Acids

52.51

Weight (kDa)

8.33

Isoelectric Point (pI)

36.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01960
fragaria_vesca	FvH4_6g09390 FvH4_7g26260 FvH4_7g26260
malus_domestica	MD01G1171400.v1.1 MD04G1178100.v1.1 MD07G1237600.v1.1 MD12G1193700.v1.1
prunus_persica	Prupe.2G266800_v2.0.a1 Prupe.2G266800_v2.0.a1 Prupe.6G298000_v2.0.a1
pyrus_communis	pycom01g18360 pycom04g15710 pycom07g21390 pycom12g17990
rosa_chinensis	RchiOBHm_Chr1g0372711 RchiOBHm_Chr3g0459771
rosa_laevigata	RLG00000025058 RLG00000026877
rosa_multiflora	Rmu_sc0009717.1_g000009 Rmu_ssc0000185.1_g000002
rosa_roxburghii	Rroxscaffold_4G00284730 Rroxscaffold_6G00419970
rosa_rugosa	Rorug01G0373800 Rorug03G0038100
rosa_samantha	Rh1AG382600 Rh1BG346100 Rh1CG359400 Rh1DG377200 Rh3AG096800 Rh3BG099500 Rh3CG101400 Rh3DG100800
rosa_wichuraiana	Rw1G033660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	887
Acc65I	GGTACC	1 cut(s)	1038
AccB1I	GGYRCC	2 cut(s)	100, 1038
AccB7I	CCANNNNNTGG	1 cut(s)	380
AccBSI	CCGCTC	1 cut(s)	147
AccII	CGCG	1 cut(s)	141
AciI	CCGC	5 cut(s)	139, 141, 145, 350, 619
AclWI	GGATC	2 cut(s)	213, 1399
AcoI	YGGCCR	1 cut(s)	142
AcuI	CTGAAG	3 cut(s)	932, 1178, 1188
AcyI	GRCGYC	1 cut(s)	101
AfaI	GTAC	7 cut(s)	125, 348, 445, 809, 932, 1010, 1040
AfeI	AGCGCT	1 cut(s)	190
AfiI	CCNNNNNNNGG	1 cut(s)	380
AflIII	ACRYGT	1 cut(s)	1334
AgeI	ACCGGT	1 cut(s)	1041
AgsI	TTSAA	5 cut(s)	575, 673, 709, 1054, 1111
AjnI	CCWGG	1 cut(s)	310
AjuI	GAANNNNNNNTTGG	4 cut(s)	346, 378, 869, 901
AleI	CACNNNNGTG	1 cut(s)	1033
AluBI	AGCT	7 cut(s)	38, 164, 223, 704, 1114, 1352, 1414
AluI	AGCT	7 cut(s)	38, 164, 223, 704, 1114, 1352, 1414
Alw21I	GWGCWC	2 cut(s)	1185, 1354
Alw26I	GTCTC	1 cut(s)	1076
Alw44I	GTGCAC	1 cut(s)	1181
AlwI	GGATC	2 cut(s)	213, 1399
Aor51HI	AGCGCT	1 cut(s)	190
AoxI	GGCC	2 cut(s)	142, 1014
ApaLI	GTGCAC	1 cut(s)	1181
ApeKI	GCWGC	7 cut(s)	191, 194, 560, 659, 899, 1151, 1220
AseI	ATTAAT	3 cut(s)	815, 926, 1085
AsiGI	ACCGGT	1 cut(s)	1041
Asp718I	GGTACC	1 cut(s)	1038
AspLEI	GCGC	2 cut(s)	103, 191
AspS9I	GGNCC	3 cut(s)	308, 889, 1014
AsuC2I	CCSGG	3 cut(s)	45, 203, 1013
AsuHPI	GGTGA	4 cut(s)	146, 200, 512, 886
AvaII	GGWCC	2 cut(s)	308, 889
BaeGI	GKGCMC	1 cut(s)	1185
BanI	GGYRCC	2 cut(s)	100, 1038
BanII	GRGCYC	1 cut(s)	1354
BarI	GAAGNNNNNNTAC	4 cut(s)	330, 362, 1031, 1063
BbsI	GAAGAC	1 cut(s)	604
Bbv12I	GWGCWC	2 cut(s)	1185, 1354
BbvCI	CCTCAGC	1 cut(s)	332
BbvI	GCAGC	7 cut(s)	178, 181, 547, 646, 911, 1138, 1232
BccI	CCATC	7 cut(s)	219, 245, 299, 422, 482, 497, 1382
BceAI	ACGGC	1 cut(s)	344
BcgI	CGANNNNNNTGC	2 cut(s)	1217, 1251
BciT130I	CCWGG	1 cut(s)	312
BcnI	CCSGG	3 cut(s)	45, 203, 1013
BcoDI	GTCTC	1 cut(s)	1076
BfaI	CTAG	2 cut(s)	224, 564
BfmI	CTRYAG	2 cut(s)	393, 1365
BfoI	RGCGCY	2 cut(s)	104, 192
BglII	AGATCT	1 cut(s)	1369
BisI	GCNGC	9 cut(s)	142, 145, 192, 195, 561, 660, 900, 1152, 1221
BlsI	GCNGC	9 cut(s)	143, 146, 193, 196, 562, 661, 901, 1153, 1222
BmcAI	AGTACT	1 cut(s)	125
Bme1390I	CCNGG	4 cut(s)	45, 203, 312, 1013
Bme18I	GGWCC	2 cut(s)	308, 889
BmgT120I	GGNCC	3 cut(s)	308, 889, 1014
BmiI	GGNNCC	3 cut(s)	102, 788, 1040
BmrFI	CCNGG	4 cut(s)	45, 203, 312, 1013
BmrI	ACTGGG	1 cut(s)	519
BmsI	GCATC	2 cut(s)	750, 1245
BmuI	ACTGGG	1 cut(s)	519
BpiI	GAAGAC	1 cut(s)	604
Bpu10I	CCTNAGC	1 cut(s)	332
BpuMI	CCSGG	3 cut(s)	45, 203, 1013
BsaBI	GATNNNNATC	1 cut(s)	210
BsaHI	GRCGYC	1 cut(s)	101
BsaJI	CCNNGG	3 cut(s)	139, 311, 885
BsaWI	WCCGGW	1 cut(s)	1041
Bsc4I	CCNNNNNNNGG	1 cut(s)	380
Bse118I	RCCGGY	1 cut(s)	1041
Bse1I	ACTGG	4 cut(s)	514, 785, 990, 1031
Bse3DI	GCAATG	3 cut(s)	253, 758, 909
Bse8I	GATNNNNATC	1 cut(s)	210
BseBI	CCWGG	1 cut(s)	312
BseDI	CCNNGG	3 cut(s)	139, 311, 885
BseGI	GGATG	3 cut(s)	310, 418, 615
BseJI	GATNNNNATC	1 cut(s)	210
BseLI	CCNNNNNNNGG	1 cut(s)	380
BseMI	GCAATG	3 cut(s)	253, 758, 909
BseMII	CTCAG	3 cut(s)	141, 156, 323
BseNI	ACTGG	4 cut(s)	514, 785, 990, 1031
BseSI	GKGCMC	1 cut(s)	1185
BseX3I	CGGCCG	1 cut(s)	142
BseXI	GCAGC	7 cut(s)	178, 181, 547, 646, 911, 1138, 1232
BseYI	CCCAGC	1 cut(s)	380
BsgI	GTGCAG	4 cut(s)	300, 351, 1137, 1366
Bsh1236I	CGCG	1 cut(s)	141
Bsh1285I	CGRYCG	1 cut(s)	145
BshFI	GGCC	2 cut(s)	144, 1016
BshNI	GGYRCC	2 cut(s)	100, 1038
BshTI	ACCGGT	1 cut(s)	1041
BsiEI	CGRYCG	1 cut(s)	145
BsiHKAI	GWGCWC	2 cut(s)	1185, 1354
BsiSI	CCGG	4 cut(s)	44, 202, 1012, 1042
BslFI	GGGAC	1 cut(s)	447
BslI	CCNNNNNNNGG	1 cut(s)	380
BsmAI	GTCTC	1 cut(s)	1076
BsmFI	GGGAC	1 cut(s)	447
BsmI	GAATGC	1 cut(s)	752
BsnI	GGCC	2 cut(s)	144, 1016
Bsp1286I	GDGCHC	2 cut(s)	1185, 1354
Bsp143I	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
BspACI	CCGC	5 cut(s)	139, 141, 145, 350, 619
BspANI	GGCC	2 cut(s)	144, 1016
BspCNI	CTCAG	3 cut(s)	140, 157, 324
BspFNI	CGCG	1 cut(s)	141
BspLI	GGNNCC	3 cut(s)	102, 788, 1040
BspMAI	CTGCAG	1 cut(s)	1369
BspPI	GGATC	2 cut(s)	213, 1399
BspT107I	GGYRCC	2 cut(s)	100, 1038
BsrBI	CCGCTC	1 cut(s)	147
BsrDI	GCAATG	3 cut(s)	253, 758, 909
BsrFI	RCCGGY	1 cut(s)	1041
BsrI	ACTGG	4 cut(s)	514, 785, 990, 1031
BssAI	RCCGGY	1 cut(s)	1041
BssECI	CCNNGG	3 cut(s)	139, 311, 885
BssMI	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
BssNI	GRCGYC	1 cut(s)	101
BssT1I	CCWWGG	1 cut(s)	885
Bst2UI	CCWGG	1 cut(s)	312
Bst4CI	ACNGT	3 cut(s)	346, 730, 944
BstACI	GRCGYC	1 cut(s)	101
BstC8I	GCNNGC	5 cut(s)	558, 623, 855, 1225, 1260
BstDEI	CTNAG	4 cut(s)	127, 165, 332, 1373
BstDSI	CCRYGG	1 cut(s)	139
BstF5I	GGATG	3 cut(s)	310, 418, 615
BstFNI	CGCG	1 cut(s)	141
BstH2I	RGCGCY	2 cut(s)	104, 192
BstHHI	GCGC	2 cut(s)	103, 191
BstKTI	GATC	7 cut(s)	208, 442, 802, 1231, 1372, 1379, 1394
BstMAI	GTCTC	1 cut(s)	1076
BstMBI	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
BstMCI	CGRYCG	1 cut(s)	145
BstMWI	GCNNNNNNNGC	4 cut(s)	386, 395, 1160, 1302
BstNI	CCWGG	1 cut(s)	312
BstNSI	RCATGY	4 cut(s)	767, 857, 1262, 1338
BstSCI	CCNGG	4 cut(s)	43, 201, 310, 1011
BstSFI	CTRYAG	2 cut(s)	393, 1365
BstSLI	GKGCMC	1 cut(s)	1185
BstUI	CGCG	1 cut(s)	141
BstV1I	GCAGC	7 cut(s)	178, 181, 547, 646, 911, 1138, 1232
BstV2I	GAAGAC	1 cut(s)	604
BstX2I	RGATCY	1 cut(s)	1369
BstXI	CCANNNNNNTGG	1 cut(s)	849
BstYI	RGATCY	1 cut(s)	1369
BstZI	CGGCCG	1 cut(s)	142
BsuRI	GGCC	2 cut(s)	144, 1016
BtgI	CCRYGG	1 cut(s)	139
BtgZI	GCGATG	1 cut(s)	1401
BtsCI	GGATG	3 cut(s)	310, 418, 615
BtsIMutI	CAGTG	3 cut(s)	983, 1038, 1154
Cac8I	GCNNGC	5 cut(s)	558, 623, 855, 1225, 1260
CciNI	GCGGCCGC	1 cut(s)	142
CfoI	GCGC	2 cut(s)	103, 191
Cfr10I	RCCGGY	1 cut(s)	1041
Cfr13I	GGNCC	3 cut(s)	308, 889, 1014
Cfr42I	CCGCGG	1 cut(s)	142
Csp6I	GTAC	7 cut(s)	124, 347, 444, 808, 931, 1009, 1039
CspAI	ACCGGT	1 cut(s)	1041
CviAII	CATG	6 cut(s)	296, 764, 854, 871, 1259, 1335
CviQI	GTAC	7 cut(s)	124, 347, 444, 808, 931, 1009, 1039
DdeI	CTNAG	4 cut(s)	127, 165, 332, 1373
DinI	GGCGCC	1 cut(s)	102
DpnI	GATC	7 cut(s)	207, 441, 801, 1230, 1371, 1378, 1393
DpnII	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
DrdI	GACNNNNNNGTC	1 cut(s)	887
DseDI	GACNNNNNNGTC	1 cut(s)	887
EaeI	YGGCCR	1 cut(s)	142
EagI	CGGCCG	1 cut(s)	142
EciI	GGCGGA	1 cut(s)	608
Ecl136II	GAGCTC	1 cut(s)	1352
EclXI	CGGCCG	1 cut(s)	142
Eco130I	CCWWGG	1 cut(s)	885
Eco24I	GRGCYC	1 cut(s)	1354
Eco47I	GGWCC	2 cut(s)	308, 889
Eco47III	AGCGCT	1 cut(s)	190
Eco52I	CGGCCG	1 cut(s)	142
Eco53kI	GAGCTC	1 cut(s)	1352
Eco57I	CTGAAG	3 cut(s)	932, 1178, 1188
EcoICRI	GAGCTC	1 cut(s)	1352
EcoRII	CCWGG	1 cut(s)	310
EcoT14I	CCWWGG	1 cut(s)	885
EcoT22I	ATGCAT	1 cut(s)	1260
EcoT38I	GRGCYC	1 cut(s)	1354
EgeI	GGCGCC	1 cut(s)	102
EheI	GGCGCC	1 cut(s)	102
ErhI	CCWWGG	1 cut(s)	885
FaeI	CATG	6 cut(s)	299, 767, 857, 874, 1262, 1338
FaqI	GGGAC	1 cut(s)	447
FatI	CATG	6 cut(s)	295, 763, 853, 870, 1258, 1334
FauNDI	CATATG	1 cut(s)	1195
Fnu4HI	GCNGC	9 cut(s)	142, 145, 192, 195, 561, 660, 900, 1152, 1221
FokI	GGATG	3 cut(s)	317, 425, 602
FriOI	GRGCYC	1 cut(s)	1354
Fsp4HI	GCNGC	9 cut(s)	142, 145, 192, 195, 561, 660, 900, 1152, 1221
FspBI	CTAG	2 cut(s)	224, 564
GlaI	GCGC	2 cut(s)	102, 190
GluI	GCNGC	9 cut(s)	142, 145, 192, 195, 561, 660, 900, 1152, 1221
GsaI	CCCAGC	1 cut(s)	384
HaeII	RGCGCY	2 cut(s)	104, 192
HaeIII	GGCC	2 cut(s)	144, 1016
HapII	CCGG	4 cut(s)	44, 202, 1012, 1042
HhaI	GCGC	2 cut(s)	103, 191
Hin1I	GRCGYC	1 cut(s)	101
Hin1II	CATG	6 cut(s)	299, 767, 857, 874, 1262, 1338
Hin6I	GCGC	2 cut(s)	101, 189
HinP1I	GCGC	2 cut(s)	101, 189
HinfI	GANTC	4 cut(s)	26, 167, 527, 1069
HpaII	CCGG	4 cut(s)	44, 202, 1012, 1042
HphI	GGTGA	4 cut(s)	146, 200, 512, 886
Hpy166II	GTNNAC	3 cut(s)	778, 1183, 1283
Hpy188I	TCNGA	4 cut(s)	423, 540, 1207, 1312
Hpy188III	TCNNGA	6 cut(s)	23, 324, 790, 1051, 1129, 1170
Hpy8I	GTNNAC	3 cut(s)	778, 1183, 1283
HpyAV	CCTTC	6 cut(s)	488, 703, 856, 1126, 1153, 1153
HpyCH4III	ACNGT	3 cut(s)	346, 730, 944
HpyF10VI	GCNNNNNNNGC	4 cut(s)	386, 395, 1160, 1302
HpyF3I	CTNAG	4 cut(s)	127, 165, 332, 1373
Hsp92I	GRCGYC	1 cut(s)	101
Hsp92II	CATG	6 cut(s)	299, 767, 857, 874, 1262, 1338
HspAI	GCGC	2 cut(s)	101, 189
KasI	GGCGCC	1 cut(s)	100
KpnI	GGTACC	1 cut(s)	1042
KspI	CCGCGG	1 cut(s)	142
Kzo9I	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
LmnI	GCTCC	2 cut(s)	292, 1267
Lsp1109I	GCAGC	7 cut(s)	178, 181, 547, 646, 911, 1138, 1232
LweI	GCATC	2 cut(s)	750, 1245
MaeI	CTAG	2 cut(s)	224, 564
MaeIII	GTNAC	3 cut(s)	340, 643, 1167
MalI	GATC	7 cut(s)	207, 441, 801, 1230, 1371, 1378, 1393
MbiI	CCGCTC	1 cut(s)	147
MboI	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
MboII	GAAGA	4 cut(s)	522, 604, 1039, 1264
MfeI	CAATTG	1 cut(s)	467
MflI	RGATCY	1 cut(s)	1369
MhlI	GDGCHC	2 cut(s)	1185, 1354
MluCI	AATT	6 cut(s)	105, 230, 273, 467, 648, 816
Mly113I	GGCGCC	1 cut(s)	101
MlyI	GAGTC	3 cut(s)	20, 176, 1078
Mph1103I	ATGCAT	1 cut(s)	1260
MseI	TTAA	6 cut(s)	177, 473, 689, 815, 926, 1085
MslI	CAYNNNNRTG	3 cut(s)	869, 872, 1033
MspA1I	CMGCKG	2 cut(s)	141, 1414
MspI	CCGG	4 cut(s)	44, 202, 1012, 1042
MspR9I	CCNGG	4 cut(s)	45, 203, 312, 1013
MunI	CAATTG	1 cut(s)	467
Mva1269I	GAATGC	1 cut(s)	752
MvaI	CCWGG	1 cut(s)	312
MvnI	CGCG	1 cut(s)	141
MwoI	GCNNNNNNNGC	4 cut(s)	386, 395, 1160, 1302
NarI	GGCGCC	1 cut(s)	101
NciI	CCSGG	3 cut(s)	45, 203, 1013
NdeI	CATATG	1 cut(s)	1195
NdeII	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
NlaIII	CATG	6 cut(s)	299, 767, 857, 874, 1262, 1338
NlaIV	GGNNCC	3 cut(s)	102, 788, 1040
NmuCI	GTSAC	1 cut(s)	1167
NotI	GCGGCCGC	1 cut(s)	142
NsiI	ATGCAT	1 cut(s)	1260
NspI	RCATGY	4 cut(s)	767, 857, 1262, 1338
OliI	CACNNNNGTG	1 cut(s)	1033
PaeI	GCATGC	2 cut(s)	857, 1262
PciI	ACATGT	1 cut(s)	1334
PctI	GAATGC	1 cut(s)	752
PfeI	GAWTC	1 cut(s)	527
PflMI	CCANNNNNTGG	1 cut(s)	380
PfoI	TCCNGGA	2 cut(s)	43, 201
PinAI	ACCGGT	1 cut(s)	1041
PkrI	GCNGC	9 cut(s)	143, 146, 193, 196, 562, 661, 901, 1153, 1222
PleI	GAGTC	3 cut(s)	20, 175, 1077
PluTI	GGCGCC	1 cut(s)	104
PpsI	GAGTC	3 cut(s)	20, 175, 1077
PscI	ACATGT	1 cut(s)	1334
PshBI	ATTAAT	3 cut(s)	815, 926, 1085
Psp124BI	GAGCTC	1 cut(s)	1354
Psp6I	CCWGG	1 cut(s)	310
PspFI	CCCAGC	1 cut(s)	380
PspGI	CCWGG	1 cut(s)	310
PspN4I	GGNNCC	3 cut(s)	102, 788, 1040
PspPI	GGNCC	3 cut(s)	308, 889, 1014
PsrI	GAACNNNNNNTAC	2 cut(s)	427, 459
PstI	CTGCAG	1 cut(s)	1369
PsuI	RGATCY	1 cut(s)	1369
PvuII	CAGCTG	1 cut(s)	1414
RsaI	GTAC	7 cut(s)	125, 348, 445, 809, 932, 1010, 1040
RsaNI	GTAC	7 cut(s)	124, 347, 444, 808, 931, 1009, 1039
RseI	CAYNNNNRTG	3 cut(s)	869, 872, 1033
SacI	GAGCTC	1 cut(s)	1354
SacII	CCGCGG	1 cut(s)	142
SaqAI	TTAA	6 cut(s)	177, 473, 689, 815, 926, 1085
SatI	GCNGC	9 cut(s)	142, 145, 192, 195, 561, 660, 900, 1152, 1221
Sau3AI	GATC	7 cut(s)	205, 439, 799, 1228, 1369, 1376, 1391
Sau96I	GGNCC	3 cut(s)	308, 889, 1014
ScaI	AGTACT	1 cut(s)	125
SchI	GAGTC	3 cut(s)	20, 176, 1078
ScrFI	CCNGG	4 cut(s)	45, 203, 312, 1013
SduI	GDGCHC	2 cut(s)	1185, 1354
SfaNI	GCATC	2 cut(s)	750, 1245
SfcI	CTRYAG	2 cut(s)	393, 1365
SfoI	GGCGCC	1 cut(s)	102
Sfr303I	CCGCGG	1 cut(s)	142
SgrBI	CCGCGG	1 cut(s)	142
SinI	GGWCC	2 cut(s)	308, 889
SmiMI	CAYNNNNRTG	3 cut(s)	869, 872, 1033
SphI	GCATGC	2 cut(s)	857, 1262
Sse9I	AATT	6 cut(s)	105, 230, 273, 467, 648, 816
SsiI	CCGC	5 cut(s)	139, 141, 145, 350, 619
SspDI	GGCGCC	1 cut(s)	100
SspMI	CTAG	2 cut(s)	224, 564
SstI	GAGCTC	1 cut(s)	1354
StyD4I	CCNGG	4 cut(s)	43, 201, 310, 1011
StyI	CCWWGG	1 cut(s)	885
TaaI	ACNGT	3 cut(s)	346, 730, 944
TaqI	TCGA	2 cut(s)	1128, 1276
TasI	AATT	6 cut(s)	105, 230, 273, 467, 648, 816
TatI	WGTACW	2 cut(s)	123, 930
TauI	GCSGC	2 cut(s)	144, 147
TfiI	GAWTC	1 cut(s)	527
Tru1I	TTAA	6 cut(s)	177, 473, 689, 815, 926, 1085
Tru9I	TTAA	6 cut(s)	177, 473, 689, 815, 926, 1085
TscAI	CASTG	3 cut(s)	990, 1038, 1161
TseFI	GTSAC	1 cut(s)	1167
TseI	GCWGC	7 cut(s)	191, 194, 560, 659, 899, 1151, 1220
Tsp45I	GTSAC	1 cut(s)	1167
TspDTI	ATGAA	2 cut(s)	604, 853
TspGWI	ACGGA	4 cut(s)	422, 881, 1329, 1345
TspRI	CASTG	3 cut(s)	990, 1038, 1161
Van91I	CCANNNNNTGG	1 cut(s)	380
VneI	GTGCAC	1 cut(s)	1181
VpaK11BI	GGWCC	2 cut(s)	308, 889
VspI	ATTAAT	3 cut(s)	815, 926, 1085
XceI	RCATGY	4 cut(s)	767, 857, 1262, 1338
XcmI	CCANNNNNNNNNTGG	2 cut(s)	473, 1032
XspI	CTAG	2 cut(s)	224, 564
ZrmI	AGTACT	1 cut(s)	125
Zsp2I	ATGCAT	1 cut(s)	1260

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.