Rh1CG359400

RING finger and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
63280835 .. 63287651
6817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG359400.1

Sequence Viewer

Length: 1338 bp
ATGGAGGCATCGGCCGGCAATGGGAGCAGTGCGAGCAGTGGAGGGAACAGTAGTGGTGGTGGTGGTGGTGAGGATCGTGCGACGTCGTTTGGCTCTATGCAATTCCCGGCGCTGCGATTCTTCCAGTCGCCGCTTTCTTTTCTGTTAGATTACTCCGGCATACTTTCGCCTACCTCGTCGTCCTCGCGCCACGAGAGCGACGCTCCGGTGGTCAACGCGGGCGTCGTCGCCGATTCGCGGCCGCATTCCCCTGCGGCCTGCACCAGCGGCTCTAGCAACGCCGGGGAGGTTTCGATTCGGATTATCGGCGCCGGGGAGCAGGAGGACCGCGGGAATAGTAACGAAACGACGGCGTTGCAAGGGCAGCGTGGAGAGGAGAATGGAGGGGTGGAAGGAGTGGATAATCAGGCCGGGATGGATGAGAGAGTCCCCTTGGTGGCTCCGTCGTCGCCGGAACATGAGGCCGGGGAGGCTGGGAATGGCGTGGAAGAGAATTCTAGGGATTCGGCTTACCAGAGATATGATATTCAACAGGTAGCCAGGTGGATTGAGCAGGTTCTTCCGTTTTCGCTGCTCTTACTCGTTGTGTTCATCCGTCAGCATTTGCAAGGTTTCTTTGTCACTATATGGATATCAGCTGTCATGTATAGGTCAAATGACATTGTTAGGAAGCAGACGGCTCTAAAGGGAGACAGGAAAATCTCTTTTCTTGTGGGCATTGCTGTTGTTTTTATGCTTCATGTGGTTGGTGTTTACTGGTGGTATCGAAATGACGATCTTTTATACCCACTAGCAATGCTCCCTCCAAAAGCCATACCGCCATTCTGGCATGCAATATTCATCATTTTGGTAAATGATACTTTGGTGAGACAGGCAACAATGGCTTTTAAGTGTTTGTTGCTTGTATACTACAAGAATGGAAGAGGGCATAACTATCGTCGACAGGGTCAAATGTTAACCGTAGTTGAGTATTCACTGCTGCTGTACCGTGCCTTATTACCAGCACCTGTTTGGTACAGATTCTTCCTGAACAAAGAATATGGAAGCCTCTTCTCATCACTTATTACAGGATTATACTTGACTTTTAAGCTAACATCTGTTGTTGAGAAGGTCCAATCCTTTTTTGCTTCTATAAGGGCATTATCACGAAAAGATATCCATTATGGGTCCCACGCAACATTGGAACAGGTAAATGCAGCAGGAGACCTTTGTGCTATTTGCCAGGAGAAGATGCATGCTCCTATCCTGTTGCGCTGCAAACACATCTTCTGCGAGGACTGTGTTTCCGAATGGTTAGTTTTCTGCCTTCTGTTTCTTACCCAGTTTATATATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

445

Amino Acids

49.21

Weight (kDa)

6.27

Isoelectric Point (pI)

47.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 86
Acc36I ACCTGC 1 cut(s) 544
AccB1I GGYRCC 1 cut(s) 308
AccI GTMKAC 2 cut(s) 906, 940
AccII CGCG 4 cut(s) 187, 218, 238, 330
AciI CCGC 9 cut(s) 131, 218, 238, 242, 254, 267, 328, 330, 818
AclWI GGATC 1 cut(s) 81
AcoI YGGCCR 2 cut(s) 12, 239
AcsI RAATTY 1 cut(s) 493
AcyI GRCGYC 3 cut(s) 83, 222, 309
AfaI GTAC 2 cut(s) 986, 1016
AfiI CCNNNNNNNGG 3 cut(s) 21, 237, 436
AgsI TTSAA 1 cut(s) 530
AjnI CCWGG 2 cut(s) 539, 1221
AluBI AGCT 2 cut(s) 638, 1090
AluI AGCT 2 cut(s) 638, 1090
Alw26I GTCTC 3 cut(s) 684, 862, 1197
AlwI GGATC 1 cut(s) 81
AlwNI CAGNNNCTG 1 cut(s) 1007
AoxI GGCC 5 cut(s) 12, 239, 255, 408, 462
ApeKI GCWGC 6 cut(s) 112, 364, 571, 979, 1196, 1254
ApoI RAATTY 1 cut(s) 493
AspLEI GCGC 4 cut(s) 112, 189, 311, 1254
AspS9I GGNCC 3 cut(s) 325, 1111, 1167
AsuC2I CCSGG 5 cut(s) 107, 283, 313, 412, 466
AsuHPI GGTGA 2 cut(s) 80, 877
AvaII GGWCC 3 cut(s) 325, 1111, 1167
BaeI ACNNNNGTAYC 2 cut(s) 849, 882
BanI GGYRCC 1 cut(s) 308
BarI GAAGNNNNNNTAC 2 cut(s) 1007, 1039
BauI CACGAG 1 cut(s) 191
BbvI GCAGC 6 cut(s) 99, 376, 558, 966, 1208, 1241
BccI CCATC 1 cut(s) 409
BceAI ACGGC 2 cut(s) 366, 693
BcgI CGANNNNNNTGC 4 cut(s) 337, 371, 917, 951
BciT130I CCWGG 2 cut(s) 541, 1223
BcnI CCSGG 5 cut(s) 107, 283, 313, 412, 466
BcoDI GTCTC 3 cut(s) 684, 862, 1197
BfaI CTAG 3 cut(s) 273, 498, 791
BfoI RGCGCY 2 cut(s) 113, 312
BfuAI ACCTGC 1 cut(s) 544
BglI GCCNNNNNGGC 2 cut(s) 470, 826
Bme1390I CCNGG 7 cut(s) 107, 283, 313, 412, 466, 541, 1223
Bme18I GGWCC 3 cut(s) 325, 1111, 1167
BmgT120I GGNCC 3 cut(s) 325, 1111, 1167
BmiI GGNNCC 4 cut(s) 310, 441, 1168, 1169
BmrFI CCNGG 7 cut(s) 107, 283, 313, 412, 466, 541, 1223
BmrI ACTGGG 1 cut(s) 1315
BmsI GCATC 2 cut(s) 17, 1221
BmuI ACTGGG 1 cut(s) 1315
BplI GAGNNNNNCTC 2 cut(s) 187, 219
BpuMI CCSGG 5 cut(s) 107, 283, 313, 412, 466
BsaHI GRCGYC 3 cut(s) 83, 222, 309
BsaI GGTCTC 1 cut(s) 1197
BsaJI CCNNGG 5 cut(s) 282, 312, 328, 432, 465
BsaWI WCCGGW 1 cut(s) 205
Bsc4I CCNNNNNNNGG 3 cut(s) 21, 237, 436
Bse118I RCCGGY 1 cut(s) 14
Bse1I ACTGG 3 cut(s) 124, 761, 1321
Bse3DI GCAATG 3 cut(s) 25, 717, 801
BseBI CCWGG 2 cut(s) 541, 1223
BseDI CCNNGG 5 cut(s) 282, 312, 328, 432, 465
BseGI GGATG 3 cut(s) 420, 424, 591
BseLI CCNNNNNNNGG 3 cut(s) 21, 237, 436
BseMI GCAATG 3 cut(s) 25, 717, 801
BseNI ACTGG 3 cut(s) 124, 761, 1321
BseRI GAGGAG 1 cut(s) 389
BseX3I CGGCCG 2 cut(s) 12, 239
BseXI GCAGC 6 cut(s) 99, 376, 558, 966, 1208, 1241
BseYI CCCAGC 1 cut(s) 473
BsgI GTGCAG 1 cut(s) 244
Bsh1236I CGCG 4 cut(s) 187, 218, 238, 330
Bsh1285I CGRYCG 2 cut(s) 15, 242
BshFI GGCC 5 cut(s) 14, 241, 257, 410, 464
BshNI GGYRCC 1 cut(s) 308
BsiEI CGRYCG 2 cut(s) 15, 242
BsiSI CCGG 9 cut(s) 15, 107, 156, 206, 282, 312, 411, 452, 465
BslFI GGGAC 2 cut(s) 413, 1153
BslI CCNNNNNNNGG 3 cut(s) 21, 237, 436
BsmAI GTCTC 3 cut(s) 684, 862, 1197
BsmFI GGGAC 2 cut(s) 413, 1153
BsmI GAATGC 1 cut(s) 244
BsnI GGCC 5 cut(s) 14, 241, 257, 410, 464
Bso31I GGTCTC 1 cut(s) 1197
Bsp143I GATC 2 cut(s) 73, 775
BspACI CCGC 9 cut(s) 131, 218, 238, 242, 254, 267, 328, 330, 818
BspANI GGCC 5 cut(s) 14, 241, 257, 410, 464
BspFNI CGCG 4 cut(s) 187, 218, 238, 330
BspLI GGNNCC 4 cut(s) 310, 441, 1168, 1169
BspMI ACCTGC 1 cut(s) 544
BspPI GGATC 1 cut(s) 81
BspT107I GGYRCC 1 cut(s) 308
BspTNI GGTCTC 1 cut(s) 1197
BsrDI GCAATG 3 cut(s) 25, 717, 801
BsrFI RCCGGY 1 cut(s) 14
BsrI ACTGG 3 cut(s) 124, 761, 1321
BssAI RCCGGY 1 cut(s) 14
BssECI CCNNGG 5 cut(s) 282, 312, 328, 432, 465
BssMI GATC 2 cut(s) 73, 775
BssNAI GTATAC 1 cut(s) 907
BssNI GRCGYC 3 cut(s) 83, 222, 309
BssSI CACGAG 1 cut(s) 191
BssT1I CCWWGG 1 cut(s) 432
Bst1107I GTATAC 1 cut(s) 907
Bst2BI CACGAG 1 cut(s) 191
Bst2UI CCWGG 2 cut(s) 541, 1223
Bst4CI ACNGT 4 cut(s) 50, 961, 989, 1280
Bst6I CTCTTC 3 cut(s) 483, 916, 1055
BstACI GRCGYC 3 cut(s) 83, 222, 309
BstC8I GCNNGC 6 cut(s) 16, 34, 220, 259, 831, 1236
BstDSI CCRYGG 1 cut(s) 328
BstF5I GGATG 3 cut(s) 420, 424, 591
BstFNI CGCG 4 cut(s) 187, 218, 238, 330
BstH2I RGCGCY 2 cut(s) 113, 312
BstHHI GCGC 4 cut(s) 112, 189, 311, 1254
BstKTI GATC 2 cut(s) 76, 778
BstMAI GTCTC 3 cut(s) 684, 862, 1197
BstMBI GATC 2 cut(s) 73, 775
BstMCI CGRYCG 2 cut(s) 15, 242
BstMWI GCNNNNNNNGC 9 cut(s) 24, 33, 195, 267, 273, 364, 470, 826, 881
BstNI CCWGG 2 cut(s) 541, 1223
BstNSI RCATGY 2 cut(s) 833, 1238
BstSCI CCNGG 7 cut(s) 105, 281, 311, 410, 464, 539, 1221
BstUI CGCG 4 cut(s) 187, 218, 238, 330
BstV1I GCAGC 6 cut(s) 99, 376, 558, 966, 1208, 1241
BstZ17I GTATAC 1 cut(s) 907
BstZI CGGCCG 2 cut(s) 12, 239
BsuRI GGCC 5 cut(s) 14, 241, 257, 410, 464
BtgI CCRYGG 1 cut(s) 328
BtsCI GGATG 3 cut(s) 420, 424, 591
BtsI GCAGTG 3 cut(s) 34, 43, 974
BtsIMutI CAGTG 3 cut(s) 34, 43, 974
BveI ACCTGC 1 cut(s) 544
Cac8I GCNNGC 6 cut(s) 16, 34, 220, 259, 831, 1236
CaiI CAGNNNCTG 1 cut(s) 1007
CciNI GCGGCCGC 1 cut(s) 239
CfoI GCGC 4 cut(s) 112, 189, 311, 1254
Cfr10I RCCGGY 1 cut(s) 14
Cfr13I GGNCC 3 cut(s) 325, 1111, 1167
Cfr42I CCGCGG 1 cut(s) 331
CseI GACGC 2 cut(s) 209, 211
Csp6I GTAC 2 cut(s) 985, 1015
CviAII CATG 5 cut(s) 458, 643, 740, 830, 1235
CviQI GTAC 2 cut(s) 985, 1015
DinI GGCGCC 1 cut(s) 310
DpnI GATC 2 cut(s) 75, 777
DpnII GATC 2 cut(s) 73, 775
EaeI YGGCCR 2 cut(s) 12, 239
EagI CGGCCG 2 cut(s) 12, 239
Eam1104I CTCTTC 3 cut(s) 483, 916, 1055
EarI CTCTTC 3 cut(s) 483, 916, 1055
EclXI CGGCCG 2 cut(s) 12, 239
Eco130I CCWWGG 1 cut(s) 432
Eco31I GGTCTC 1 cut(s) 1197
Eco32I GATATC 2 cut(s) 633, 1156
Eco47I GGWCC 3 cut(s) 325, 1111, 1167
Eco52I CGGCCG 2 cut(s) 12, 239
EcoO109I RGGNCCY 1 cut(s) 1167
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 2 cut(s) 539, 1221
EcoRV GATATC 2 cut(s) 633, 1156
EcoT14I CCWWGG 1 cut(s) 432
EcoT22I ATGCAT 1 cut(s) 1236
EgeI GGCGCC 1 cut(s) 310
EheI GGCGCC 1 cut(s) 310
ErhI CCWWGG 1 cut(s) 432
FaeI CATG 5 cut(s) 461, 646, 743, 833, 1238
FaqI GGGAC 2 cut(s) 413, 1153
FatI CATG 5 cut(s) 457, 642, 739, 829, 1234
FauI CCCGC 2 cut(s) 211, 323
FblI GTMKAC 2 cut(s) 906, 940
FokI GGATG 3 cut(s) 427, 431, 578
FspBI CTAG 3 cut(s) 273, 498, 791
GlaI GCGC 4 cut(s) 111, 188, 310, 1253
GsaI CCCAGC 1 cut(s) 477
HaeII RGCGCY 2 cut(s) 113, 312
HaeIII GGCC 5 cut(s) 14, 241, 257, 410, 464
HapII CCGG 9 cut(s) 15, 107, 156, 206, 282, 312, 411, 452, 465
HgaI GACGC 2 cut(s) 209, 211
HhaI GCGC 4 cut(s) 112, 189, 311, 1254
Hin1I GRCGYC 3 cut(s) 83, 222, 309
Hin1II CATG 5 cut(s) 461, 646, 743, 833, 1238
Hin6I GCGC 4 cut(s) 110, 187, 309, 1252
HinP1I GCGC 4 cut(s) 110, 187, 309, 1252
HincII GTYRAC 3 cut(s) 214, 941, 957
HindII GTYRAC 3 cut(s) 214, 941, 957
HinfI GANTC 6 cut(s) 117, 233, 295, 426, 503, 1020
HpaI GTTAAC 1 cut(s) 957
HpaII CCGG 9 cut(s) 15, 107, 156, 206, 282, 312, 411, 452, 465
HphI GGTGA 2 cut(s) 80, 877
Hpy166II GTNNAC 5 cut(s) 214, 754, 907, 941, 957
Hpy188I TCNGA 2 cut(s) 300, 1288
Hpy188III TCNNGA 2 cut(s) 1027, 1146
Hpy8I GTNNAC 5 cut(s) 214, 754, 907, 941, 957
HpyAV CCTTC 3 cut(s) 386, 1102, 1316
HpyCH4III ACNGT 4 cut(s) 50, 961, 989, 1280
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 8 cut(s) 100, 261, 358, 607, 833, 1196, 1234, 1257
HpyF10VI GCNNNNNNNGC 9 cut(s) 24, 33, 195, 267, 273, 364, 470, 826, 881
HpySE526I ACGT 1 cut(s) 83
Hsp92I GRCGYC 3 cut(s) 83, 222, 309
Hsp92II CATG 5 cut(s) 461, 646, 743, 833, 1238
HspAI GCGC 4 cut(s) 110, 187, 309, 1252
KasI GGCGCC 1 cut(s) 308
KflI GGGWCCC 1 cut(s) 1167
KroI GCCGGC 1 cut(s) 14
KroNI GCCGGC 1 cut(s) 16
KspAI GTTAAC 1 cut(s) 957
KspI CCGCGG 1 cut(s) 331
Kzo9I GATC 2 cut(s) 73, 775
LmnI GCTCC 6 cut(s) 24, 208, 316, 445, 804, 1243
Lsp1109I GCAGC 6 cut(s) 99, 376, 558, 966, 1208, 1241
LweI GCATC 2 cut(s) 17, 1221
MaeI CTAG 3 cut(s) 273, 498, 791
MaeII ACGT 1 cut(s) 83
MaeIII GTNAC 2 cut(s) 338, 619
MalI GATC 2 cut(s) 75, 777
MboI GATC 2 cut(s) 73, 775
MboII GAAGA 8 cut(s) 112, 500, 551, 933, 1015, 1042, 1240, 1258
MluCI AATT 3 cut(s) 101, 493, 1333
Mly113I GGCGCC 1 cut(s) 309
MlyI GAGTC 1 cut(s) 435
Mph1103I ATGCAT 1 cut(s) 1236
MroNI GCCGGC 1 cut(s) 14
MseI TTAA 3 cut(s) 888, 956, 1086
MspA1I CMGCKG 3 cut(s) 267, 330, 638
MspI CCGG 9 cut(s) 15, 107, 156, 206, 282, 312, 411, 452, 465
MspR9I CCNGG 7 cut(s) 107, 283, 313, 412, 466, 541, 1223
Mva1269I GAATGC 1 cut(s) 244
MvaI CCWGG 2 cut(s) 541, 1223
MvnI CGCG 4 cut(s) 187, 218, 238, 330
MwoI GCNNNNNNNGC 9 cut(s) 24, 33, 195, 267, 273, 364, 470, 826, 881
NaeI GCCGGC 1 cut(s) 16
NarI GGCGCC 1 cut(s) 309
NciI CCSGG 5 cut(s) 107, 283, 313, 412, 466
NdeII GATC 2 cut(s) 73, 775
NgoMIV GCCGGC 1 cut(s) 14
NlaIII CATG 5 cut(s) 461, 646, 743, 833, 1238
NlaIV GGNNCC 4 cut(s) 310, 441, 1168, 1169
NmuCI GTSAC 1 cut(s) 619
NotI GCGGCCGC 1 cut(s) 239
NsiI ATGCAT 1 cut(s) 1236
NspI RCATGY 2 cut(s) 833, 1238
PaeI GCATGC 2 cut(s) 833, 1238
PcsI WCGNNNNNNNCGW 2 cut(s) 173, 222
PctI GAATGC 1 cut(s) 244
PdiI GCCGGC 1 cut(s) 16
PfeI GAWTC 5 cut(s) 117, 233, 295, 503, 1020
PflFI GACNNNGTC 1 cut(s) 945
PleI GAGTC 1 cut(s) 434
PluTI GGCGCC 1 cut(s) 312
PpsI GAGTC 1 cut(s) 434
PpuMI RGGWCCY 1 cut(s) 1167
Psp5II RGGWCCY 1 cut(s) 1167
Psp6I CCWGG 2 cut(s) 539, 1221
PspFI CCCAGC 1 cut(s) 473
PspGI CCWGG 2 cut(s) 539, 1221
PspN4I GGNNCC 4 cut(s) 310, 441, 1168, 1169
PspPI GGNCC 3 cut(s) 325, 1111, 1167
PspPPI RGGWCCY 1 cut(s) 1167
PstNI CAGNNNCTG 1 cut(s) 1007
PsyI GACNNNGTC 1 cut(s) 945
PvuII CAGCTG 1 cut(s) 638
RsaI GTAC 2 cut(s) 986, 1016
RsaNI GTAC 2 cut(s) 985, 1015
SacII CCGCGG 1 cut(s) 331
SalI GTCGAC 1 cut(s) 939
SaqAI TTAA 3 cut(s) 888, 956, 1086
Sau3AI GATC 2 cut(s) 73, 775
Sau96I GGNCC 3 cut(s) 325, 1111, 1167
SchI GAGTC 1 cut(s) 435
ScrFI CCNGG 7 cut(s) 107, 283, 313, 412, 466, 541, 1223
SfaNI GCATC 2 cut(s) 17, 1221
SfoI GGCGCC 1 cut(s) 310
Sfr303I CCGCGG 1 cut(s) 331
SgrBI CCGCGG 1 cut(s) 331
SinI GGWCC 3 cut(s) 325, 1111, 1167
SphI GCATGC 2 cut(s) 833, 1238
Sse9I AATT 3 cut(s) 101, 493, 1333
SsiI CCGC 9 cut(s) 131, 218, 238, 242, 254, 267, 328, 330, 818
SspDI GGCGCC 1 cut(s) 308
SspI AATATT 1 cut(s) 837
SspMI CTAG 3 cut(s) 273, 498, 791
StyD4I CCNGG 7 cut(s) 105, 281, 311, 410, 464, 539, 1221
StyI CCWWGG 1 cut(s) 432
TaaI ACNGT 4 cut(s) 50, 961, 989, 1280
TaiI ACGT 1 cut(s) 86
TaqI TCGA 3 cut(s) 293, 766, 940
TasI AATT 3 cut(s) 101, 493, 1333
TauI GCSGC 5 cut(s) 133, 241, 244, 257, 270
TfiI GAWTC 5 cut(s) 117, 233, 295, 503, 1020
Tru1I TTAA 3 cut(s) 888, 956, 1086
Tru9I TTAA 3 cut(s) 888, 956, 1086
TscAI CASTG 3 cut(s) 34, 43, 981
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 6 cut(s) 112, 364, 571, 979, 1196, 1254
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 3 cut(s) 580, 728, 829
TspGWI ACGGA 3 cut(s) 432, 552, 584
TspRI CASTG 3 cut(s) 34, 43, 981
Tth111I GACNNNGTC 1 cut(s) 945
VpaK11BI GGWCC 3 cut(s) 325, 1111, 1167
XapI RAATTY 1 cut(s) 493
XceI RCATGY 2 cut(s) 833, 1238
XcmI CCANNNNNNNNNTGG 1 cut(s) 1008
XmiI GTMKAC 2 cut(s) 906, 940
XspI CTAG 3 cut(s) 273, 498, 791
ZraI GACGTC 1 cut(s) 84
Zsp2I ATGCAT 1 cut(s) 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.