Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009717.1

Orthogroup ID

OG0003923

Physical Location & Seq

Genomic Coordinates Reverse (-)

44475 .. 50821

Gene Structure 6347 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009717.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

atggaggcatcggccggcaatgggagcagtgcgagcagtggagggaacagtagtggtggtggtggtggtggtgaggatcgtgcgacgtcgtttggctctatgcaattcccggcgctgcgatttttccagtcgccgctttcttttctgttagattactccggcatactttcgcctacctcgtcgtcctcgcgccacgagagcgacgctccggtggtcaacgcgggcgtcgtcgccgattcgcggccgcattcccctgcggcctgcaccagcggctctagcaacgccggggaggtttcgattcggattatcggcgccggggagcaggaggaccgcgggaatagtaacgaaacgacggcgttgcaagggcagcgtggagaggagaatggaggggtggaaggggtggataatcaggccgggatggatgagagagtccccttggtggctccgtcgtcgccggaacatgaggccggggaggctgggaatggcgtcgaagagaattctagggattcggcttaccagagatatgatattcaacaggtagccaggtggattgagcaggttcttccgttttcgctgctcttactcgttgtgttcatccgtcagcatttgcaaggtttctttgtcactatatggatatcagctgtcatgtataggtcaaatgacattgttaggaagcagacggctctaaagggagacaggaaaatctcttttcttgtgggcattgcggttgtttttatgcttcatgtggttggtgtttactggtggtatcgaaatgacgatcttttatacccgctggcaatgcttcctccaaaagccataccaccattctggcatgcaatattcatcattttggtaaatgatacattggtgagacaggcaacgatggctttcaagtgtttgttgcttgtatactacaagaatggaagagggcataactatcgtcgacagggtcaaatgttaaccgtagttgagtattcgctgctgctgtaccgtgccttattaccagcacctgtttggtacagattcttcctgaacaaagaatatggaagcctcttctcatcacttattacaggattatacttgacttttaagctaacatctgttgttgagaaggtccaatccttttttgcttctataagggcattatcacgaaaagatatccattatgggtcccatgcaacattggaacaggtaaatgcagcaggagacctgtgtgccatttgccaggagaagatgcatgctcctatcctgttgcgctgcaaacacatcttctgcgaggactgtgtttccgaatggtttgagagagaaagaacttgccctctatgccgggcagtggtaaaacctgcagatctgcgaacgtttggggatggatcaacaagtttatttttccagttggctccaggaaatcggatggtaggtattatcactagagcgagatgtggtttggtattatgtcaatgtgttgcaatcatgaggtcatcctggagccaaatagatgagaaaacagatgacatgatcactacatctccatctacaaaacgtgcctctgatgaatgggataagcaggatcacatgtacatagatattccagatatgttatcaaaaggacttgggtggtccggtggagttggtctggctgctgctccccacagtaggacggctgtagggatcgagccgtggtcaccgtcatgttgtcatggtcatcacgatgagcaatggagtctgatcgatcagaccccagtagtcttcagaagactcagaggctcagacgaacagagtgagtgtgatgatggcaaagaagacgatacctattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

604

Amino Acids

66.69

Weight (kDa)

5.84

Isoelectric Point (pI)

48.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01960
fragaria_vesca	FvH4_6g09390 FvH4_7g26260 FvH4_7g26260
malus_domestica	MD01G1171400.v1.1 MD04G1178100.v1.1 MD07G1237600.v1.1 MD12G1193700.v1.1
prunus_persica	Prupe.2G266800_v2.0.a1 Prupe.2G266800_v2.0.a1 Prupe.6G298000_v2.0.a1
pyrus_communis	pycom01g18360 pycom04g15710 pycom07g21390 pycom12g17990
rosa_chinensis	RchiOBHm_Chr1g0372711 RchiOBHm_Chr3g0459771
rosa_laevigata	RLG00000025058 RLG00000026877
rosa_multiflora	Rmu_sc0009717.1_g000009 Rmu_ssc0000185.1_g000002
rosa_roxburghii	Rroxscaffold_4G00284730 Rroxscaffold_6G00419970
rosa_rugosa	Rorug01G0373800 Rorug03G0038100
rosa_samantha	Rh1AG382600 Rh1BG346100 Rh1CG359400 Rh1DG377200 Rh3AG096800 Rh3BG099500 Rh3CG101400 Rh3DG100800
rosa_wichuraiana	Rw1G033660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	89
Acc36I	ACCTGC	2 cut(s)	547, 1351
AccB1I	GGYRCC	1 cut(s)	311
AccI	GTMKAC	2 cut(s)	909, 943
AccII	CGCG	4 cut(s)	190, 221, 241, 333
AclI	AACGTT	1 cut(s)	1358
AclWI	GGATC	4 cut(s)	84, 1378, 1575, 1676
AcoI	YGGCCR	2 cut(s)	12, 242
AcsI	RAATTY	1 cut(s)	496
AcuI	CTGAAG	1 cut(s)	1732
AcyI	GRCGYC	4 cut(s)	86, 225, 312, 486
AfaI	GTAC	3 cut(s)	989, 1019, 1577
AfiI	CCNNNNNNNGG	5 cut(s)	21, 240, 439, 1333, 1653
AflIII	ACRYGT	1 cut(s)	1572
AgsI	TTSAA	2 cut(s)	533, 892
AjnI	CCWGG	4 cut(s)	542, 1224, 1399, 1481
AluBI	AGCT	2 cut(s)	641, 1093
AluI	AGCT	2 cut(s)	641, 1093
Alw26I	GTCTC	3 cut(s)	687, 865, 1200
AlwI	GGATC	4 cut(s)	84, 1378, 1575, 1676
AlwNI	CAGNNNCTG	1 cut(s)	1010
AoxI	GGCC	5 cut(s)	12, 242, 258, 411, 465
ApeKI	GCWGC	9 cut(s)	115, 367, 574, 979, 982, 1199, 1257, 1637, 1640
ApoI	RAATTY	1 cut(s)	496
AspLEI	GCGC	4 cut(s)	115, 192, 314, 1257
AspS9I	GGNCC	4 cut(s)	328, 1114, 1170, 1617
AsuC2I	CCSGG	6 cut(s)	110, 286, 316, 415, 469, 1328
AsuHPI	GGTGA	3 cut(s)	83, 880, 1674
AvaII	GGWCC	4 cut(s)	328, 1114, 1170, 1617
BaeI	ACNNNNGTAYC	2 cut(s)	852, 885
BanI	GGYRCC	1 cut(s)	311
BarI	GAAGNNNNNNTAC	2 cut(s)	1010, 1042
BauI	CACGAG	1 cut(s)	194
BbsI	GAAGAC	3 cut(s)	1738, 1759, 1806
BbvI	GCAGC	9 cut(s)	102, 379, 561, 966, 969, 1211, 1244, 1624, 1627
BccI	CCATC	6 cut(s)	412, 877, 1361, 1405, 1537, 1784
BceAI	ACGGC	4 cut(s)	369, 696, 1660, 1674
BcgI	CGANNNNNNTGC	4 cut(s)	340, 374, 920, 954
BciT130I	CCWGG	4 cut(s)	544, 1226, 1401, 1483
BclI	TGATCA	1 cut(s)	1515
BcnI	CCSGG	6 cut(s)	110, 286, 316, 415, 469, 1328
BcoDI	GTCTC	3 cut(s)	687, 865, 1200
BfaI	CTAG	3 cut(s)	276, 501, 1428
BfmI	CTRYAG	2 cut(s)	1344, 1662
BfoI	RGCGCY	2 cut(s)	116, 315
BfuAI	ACCTGC	2 cut(s)	547, 1351
BglI	GCCNNNNNGGC	1 cut(s)	473
BglII	AGATCT	1 cut(s)	1348
Bme18I	GGWCC	4 cut(s)	328, 1114, 1170, 1617
BmgT120I	GGNCC	4 cut(s)	328, 1114, 1170, 1617
BmiI	GGNNCC	6 cut(s)	313, 444, 1171, 1172, 1398, 1487
BmrI	ACTGGG	1 cut(s)	1733
BmsI	GCATC	2 cut(s)	17, 1224
BmuI	ACTGGG	1 cut(s)	1733
BpiI	GAAGAC	3 cut(s)	1738, 1759, 1806
BplI	GAGNNNNNCTC	2 cut(s)	190, 222
BpmI	CTGGAG	2 cut(s)	1383, 1504
BpuMI	CCSGG	6 cut(s)	110, 286, 316, 415, 469, 1328
Bsa29I	ATCGAT	1 cut(s)	1728
BsaHI	GRCGYC	4 cut(s)	86, 225, 312, 486
BsaI	GGTCTC	1 cut(s)	1200
BsaJI	CCNNGG	6 cut(s)	285, 315, 331, 435, 468, 1676
BsaWI	WCCGGW	2 cut(s)	208, 1619
BsaXI	ACNNNNNCTCC	2 cut(s)	1510, 1540
Bsc4I	CCNNNNNNNGG	5 cut(s)	21, 240, 439, 1333, 1653
Bse118I	RCCGGY	1 cut(s)	14
Bse1I	ACTGG	4 cut(s)	127, 764, 1390, 1739
Bse3DI	GCAATG	4 cut(s)	25, 720, 804, 1721
BseBI	CCWGG	4 cut(s)	544, 1226, 1401, 1483
BseCI	ATCGAT	1 cut(s)	1728
BseDI	CCNNGG	6 cut(s)	285, 315, 331, 435, 468, 1676
BseGI	GGATG	6 cut(s)	423, 427, 594, 1372, 1416, 1478
BseLI	CCNNNNNNNGG	5 cut(s)	21, 240, 439, 1333, 1653
BseMI	GCAATG	4 cut(s)	25, 720, 804, 1721
BseMII	CTCAG	2 cut(s)	1771, 1779
BseNI	ACTGG	4 cut(s)	127, 764, 1390, 1739
BseRI	GAGGAG	1 cut(s)	392
BseX3I	CGGCCG	2 cut(s)	12, 242
BseXI	GCAGC	9 cut(s)	102, 379, 561, 966, 969, 1211, 1244, 1624, 1627
BseYI	CCCAGC	1 cut(s)	476
BsgI	GTGCAG	1 cut(s)	247
Bsh1236I	CGCG	4 cut(s)	190, 221, 241, 333
Bsh1285I	CGRYCG	2 cut(s)	15, 245
BshFI	GGCC	5 cut(s)	14, 244, 260, 413, 467
BshNI	GGYRCC	1 cut(s)	311
BshVI	ATCGAT	1 cut(s)	1728
BsiEI	CGRYCG	2 cut(s)	15, 245
BslFI	GGGAC	2 cut(s)	416, 1156
BslI	CCNNNNNNNGG	5 cut(s)	21, 240, 439, 1333, 1653
BsmAI	GTCTC	3 cut(s)	687, 865, 1200
BsmFI	GGGAC	2 cut(s)	416, 1156
BsmI	GAATGC	1 cut(s)	247
BsnI	GGCC	5 cut(s)	14, 244, 260, 413, 467
Bso31I	GGTCTC	1 cut(s)	1200
Bsp1407I	TGTACA	1 cut(s)	1575
Bsp143I	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
BspANI	GGCC	5 cut(s)	14, 244, 260, 413, 467
BspCNI	CTCAG	2 cut(s)	1770, 1778
BspDI	ATCGAT	1 cut(s)	1728
BspFNI	CGCG	4 cut(s)	190, 221, 241, 333
BspHI	TCATGA	1 cut(s)	1470
BspLI	GGNNCC	6 cut(s)	313, 444, 1171, 1172, 1398, 1487
BspMAI	CTGCAG	1 cut(s)	1348
BspMI	ACCTGC	2 cut(s)	547, 1351
BspPI	GGATC	4 cut(s)	84, 1378, 1575, 1676
BspT107I	GGYRCC	1 cut(s)	311
BspTNI	GGTCTC	1 cut(s)	1200
BsrDI	GCAATG	4 cut(s)	25, 720, 804, 1721
BsrFI	RCCGGY	1 cut(s)	14
BsrGI	TGTACA	1 cut(s)	1575
BsrI	ACTGG	4 cut(s)	127, 764, 1390, 1739
BssAI	RCCGGY	1 cut(s)	14
BssECI	CCNNGG	6 cut(s)	285, 315, 331, 435, 468, 1676
BssMI	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
BssNAI	GTATAC	1 cut(s)	910
BssNI	GRCGYC	4 cut(s)	86, 225, 312, 486
BssSI	CACGAG	1 cut(s)	194
BssT1I	CCWWGG	1 cut(s)	435
Bst1107I	GTATAC	1 cut(s)	910
Bst2BI	CACGAG	1 cut(s)	194
Bst2UI	CCWGG	4 cut(s)	544, 1226, 1401, 1483
Bst4CI	ACNGT	6 cut(s)	50, 964, 992, 1283, 1652, 1686
Bst6I	CTCTTC	3 cut(s)	486, 919, 1058
BstACI	GRCGYC	4 cut(s)	86, 225, 312, 486
BstAUI	TGTACA	1 cut(s)	1575
BstC8I	GCNNGC	7 cut(s)	16, 34, 223, 262, 795, 834, 1239
BstDEI	CTNAG	2 cut(s)	1757, 1765
BstDSI	CCRYGG	2 cut(s)	331, 1676
BstEII	GGTNACC	1 cut(s)	1680
BstF5I	GGATG	6 cut(s)	423, 427, 594, 1372, 1416, 1478
BstFNI	CGCG	4 cut(s)	190, 221, 241, 333
BstH2I	RGCGCY	2 cut(s)	116, 315
BstHHI	GCGC	4 cut(s)	115, 192, 314, 1257
BstKTI	GATC	9 cut(s)	79, 781, 1351, 1373, 1518, 1570, 1671, 1728, 1732
BstMAI	GTCTC	3 cut(s)	687, 865, 1200
BstMBI	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
BstMCI	CGRYCG	2 cut(s)	15, 245
BstNI	CCWGG	4 cut(s)	544, 1226, 1401, 1483
BstNSI	RCATGY	3 cut(s)	836, 1241, 1576
BstPI	GGTNACC	1 cut(s)	1680
BstSFI	CTRYAG	2 cut(s)	1344, 1662
BstUI	CGCG	4 cut(s)	190, 221, 241, 333
BstV1I	GCAGC	9 cut(s)	102, 379, 561, 966, 969, 1211, 1244, 1624, 1627
BstV2I	GAAGAC	3 cut(s)	1738, 1759, 1806
BstX2I	RGATCY	1 cut(s)	1348
BstXI	CCANNNNNNTGG	1 cut(s)	828
BstYI	RGATCY	1 cut(s)	1348
BstZ17I	GTATAC	1 cut(s)	910
BstZI	CGGCCG	2 cut(s)	12, 242
Bsu15I	ATCGAT	1 cut(s)	1728
BsuRI	GGCC	5 cut(s)	14, 244, 260, 413, 467
BsuTUI	ATCGAT	1 cut(s)	1728
BtgI	CCRYGG	2 cut(s)	331, 1676
BtsCI	GGATG	6 cut(s)	423, 427, 594, 1372, 1416, 1478
BtsI	GCAGTG	3 cut(s)	34, 43, 1338
BtsIMutI	CAGTG	3 cut(s)	34, 43, 1338
BveI	ACCTGC	2 cut(s)	547, 1351
Cac8I	GCNNGC	7 cut(s)	16, 34, 223, 262, 795, 834, 1239
CaiI	CAGNNNCTG	1 cut(s)	1010
CciI	TCATGA	1 cut(s)	1470
CciNI	GCGGCCGC	1 cut(s)	242
CfoI	GCGC	4 cut(s)	115, 192, 314, 1257
Cfr10I	RCCGGY	1 cut(s)	14
Cfr13I	GGNCC	4 cut(s)	328, 1114, 1170, 1617
Cfr42I	CCGCGG	1 cut(s)	334
ClaI	ATCGAT	1 cut(s)	1728
CseI	GACGC	3 cut(s)	212, 214, 475
Csp6I	GTAC	3 cut(s)	988, 1018, 1576
CviQI	GTAC	3 cut(s)	988, 1018, 1576
DdeI	CTNAG	2 cut(s)	1757, 1765
DinI	GGCGCC	1 cut(s)	313
DpnI	GATC	9 cut(s)	78, 780, 1350, 1372, 1517, 1569, 1670, 1727, 1731
DpnII	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
EaeI	YGGCCR	2 cut(s)	12, 242
EagI	CGGCCG	2 cut(s)	12, 242
Eam1104I	CTCTTC	3 cut(s)	486, 919, 1058
EarI	CTCTTC	3 cut(s)	486, 919, 1058
EclXI	CGGCCG	2 cut(s)	12, 242
Eco130I	CCWWGG	1 cut(s)	435
Eco31I	GGTCTC	1 cut(s)	1200
Eco32I	GATATC	2 cut(s)	636, 1159
Eco47I	GGWCC	4 cut(s)	328, 1114, 1170, 1617
Eco52I	CGGCCG	2 cut(s)	12, 242
Eco57I	CTGAAG	1 cut(s)	1732
Eco91I	GGTNACC	1 cut(s)	1680
EcoO109I	RGGNCCY	1 cut(s)	1170
EcoO65I	GGTNACC	1 cut(s)	1680
EcoRI	GAATTC	1 cut(s)	496
EcoRII	CCWGG	4 cut(s)	542, 1224, 1399, 1481
EcoRV	GATATC	2 cut(s)	636, 1159
EcoT14I	CCWWGG	1 cut(s)	435
EcoT22I	ATGCAT	1 cut(s)	1239
EgeI	GGCGCC	1 cut(s)	313
EheI	GGCGCC	1 cut(s)	313
ErhI	CCWWGG	1 cut(s)	435
FaqI	GGGAC	2 cut(s)	416, 1156
FauI	CCCGC	3 cut(s)	214, 326, 798
FbaI	TGATCA	1 cut(s)	1515
FblI	GTMKAC	2 cut(s)	909, 943
FokI	GGATG	6 cut(s)	430, 434, 581, 1379, 1423, 1465
FspBI	CTAG	3 cut(s)	276, 501, 1428
GlaI	GCGC	4 cut(s)	114, 191, 313, 1256
GsaI	CCCAGC	1 cut(s)	480
GsuI	CTGGAG	2 cut(s)	1383, 1504
HaeII	RGCGCY	2 cut(s)	116, 315
HaeIII	GGCC	5 cut(s)	14, 244, 260, 413, 467
HgaI	GACGC	3 cut(s)	212, 214, 475
HhaI	GCGC	4 cut(s)	115, 192, 314, 1257
Hin1I	GRCGYC	4 cut(s)	86, 225, 312, 486
Hin6I	GCGC	4 cut(s)	113, 190, 312, 1255
HinP1I	GCGC	4 cut(s)	113, 190, 312, 1255
HincII	GTYRAC	3 cut(s)	217, 944, 960
HindII	GTYRAC	3 cut(s)	217, 944, 960
HinfI	GANTC	7 cut(s)	236, 298, 429, 506, 1023, 1720, 1755
HpaI	GTTAAC	1 cut(s)	960
HphI	GGTGA	3 cut(s)	83, 880, 1674
Hpy166II	GTNNAC	5 cut(s)	217, 757, 910, 944, 960
Hpy188I	TCNGA	9 cut(s)	303, 1291, 1410, 1549, 1725, 1734, 1751, 1760, 1768
Hpy188III	TCNNGA	5 cut(s)	1030, 1149, 1471, 1589, 1706
Hpy8I	GTNNAC	5 cut(s)	217, 757, 910, 944, 960
HpyAV	CCTTC	2 cut(s)	389, 1105
HpyCH4III	ACNGT	6 cut(s)	50, 964, 992, 1283, 1652, 1686
HpyCH4IV	ACGT	3 cut(s)	86, 1358, 1540
HpyF3I	CTNAG	2 cut(s)	1757, 1765
HpySE526I	ACGT	3 cut(s)	86, 1358, 1540
Hsp92I	GRCGYC	4 cut(s)	86, 225, 312, 486
HspAI	GCGC	4 cut(s)	113, 190, 312, 1255
KasI	GGCGCC	1 cut(s)	311
KflI	GGGWCCC	1 cut(s)	1170
KroI	GCCGGC	1 cut(s)	14
KroNI	GCCGGC	1 cut(s)	16
Ksp22I	TGATCA	1 cut(s)	1515
KspAI	GTTAAC	1 cut(s)	960
KspI	CCGCGG	1 cut(s)	334
Kzo9I	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
LmnI	GCTCC	8 cut(s)	24, 211, 319, 448, 1246, 1402, 1485, 1648
Lsp1109I	GCAGC	9 cut(s)	102, 379, 561, 966, 969, 1211, 1244, 1624, 1627
LweI	GCATC	2 cut(s)	17, 1224
MaeI	CTAG	3 cut(s)	276, 501, 1428
MaeII	ACGT	3 cut(s)	86, 1358, 1540
MaeIII	GTNAC	3 cut(s)	341, 622, 1680
MalI	GATC	9 cut(s)	78, 780, 1350, 1372, 1517, 1569, 1670, 1727, 1731
MboI	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
MflI	RGATCY	1 cut(s)	1348
MluCI	AATT	2 cut(s)	104, 496
Mly113I	GGCGCC	1 cut(s)	312
MlyI	GAGTC	3 cut(s)	438, 1729, 1749
Mph1103I	ATGCAT	1 cut(s)	1239
MroNI	GCCGGC	1 cut(s)	14
MseI	TTAA	3 cut(s)	959, 1089, 1813
MslI	CAYNNNNRTG	2 cut(s)	1687, 1707
MspA1I	CMGCKG	4 cut(s)	270, 333, 641, 793
Mva1269I	GAATGC	1 cut(s)	247
MvaI	CCWGG	4 cut(s)	544, 1226, 1401, 1483
MvnI	CGCG	4 cut(s)	190, 221, 241, 333
NaeI	GCCGGC	1 cut(s)	16
NarI	GGCGCC	1 cut(s)	312
NciI	CCSGG	6 cut(s)	110, 286, 316, 415, 469, 1328
NdeII	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
NgoMIV	GCCGGC	1 cut(s)	14
NlaIV	GGNNCC	6 cut(s)	313, 444, 1171, 1172, 1398, 1487
NmuCI	GTSAC	2 cut(s)	622, 1680
NotI	GCGGCCGC	1 cut(s)	242
NsiI	ATGCAT	1 cut(s)	1239
NspI	RCATGY	3 cut(s)	836, 1241, 1576
PaeI	GCATGC	2 cut(s)	836, 1241
PagI	TCATGA	1 cut(s)	1470
PciI	ACATGT	1 cut(s)	1572
PcsI	WCGNNNNNNNCGW	2 cut(s)	176, 225
PctI	GAATGC	1 cut(s)	247
PdiI	GCCGGC	1 cut(s)	16
PfeI	GAWTC	4 cut(s)	236, 298, 506, 1023
PflFI	GACNNNGTC	1 cut(s)	948
PfoI	TCCNGGA	2 cut(s)	1399, 1481
PleI	GAGTC	3 cut(s)	437, 1728, 1749
PluTI	GGCGCC	1 cut(s)	315
PpsI	GAGTC	3 cut(s)	437, 1728, 1749
PpuMI	RGGWCCY	1 cut(s)	1170
PscI	ACATGT	1 cut(s)	1572
Psp1406I	AACGTT	1 cut(s)	1358
Psp5II	RGGWCCY	1 cut(s)	1170
Psp6I	CCWGG	4 cut(s)	542, 1224, 1399, 1481
PspEI	GGTNACC	1 cut(s)	1680
PspFI	CCCAGC	1 cut(s)	476
PspGI	CCWGG	4 cut(s)	542, 1224, 1399, 1481
PspN4I	GGNNCC	6 cut(s)	313, 444, 1171, 1172, 1398, 1487
PspPI	GGNCC	4 cut(s)	328, 1114, 1170, 1617
PspPPI	RGGWCCY	1 cut(s)	1170
PstI	CTGCAG	1 cut(s)	1348
PstNI	CAGNNNCTG	1 cut(s)	1010
PsuI	RGATCY	1 cut(s)	1348
PsyI	GACNNNGTC	1 cut(s)	948
PvuII	CAGCTG	1 cut(s)	641
RsaI	GTAC	3 cut(s)	989, 1019, 1577
RsaNI	GTAC	3 cut(s)	988, 1018, 1576
RseI	CAYNNNNRTG	2 cut(s)	1687, 1707
SacII	CCGCGG	1 cut(s)	334
SalI	GTCGAC	1 cut(s)	942
SaqAI	TTAA	3 cut(s)	959, 1089, 1813
Sau3AI	GATC	9 cut(s)	76, 778, 1348, 1370, 1515, 1567, 1668, 1725, 1729
Sau96I	GGNCC	4 cut(s)	328, 1114, 1170, 1617
SchI	GAGTC	3 cut(s)	438, 1729, 1749
SfaNI	GCATC	2 cut(s)	17, 1224
SfcI	CTRYAG	2 cut(s)	1344, 1662
SfoI	GGCGCC	1 cut(s)	313
Sfr303I	CCGCGG	1 cut(s)	334
SgrBI	CCGCGG	1 cut(s)	334
SinI	GGWCC	4 cut(s)	328, 1114, 1170, 1617
SmiMI	CAYNNNNRTG	2 cut(s)	1687, 1707
SphI	GCATGC	2 cut(s)	836, 1241
Sse9I	AATT	2 cut(s)	104, 496
SspDI	GGCGCC	1 cut(s)	311
SspI	AATATT	1 cut(s)	840
SspMI	CTAG	3 cut(s)	276, 501, 1428
StyI	CCWWGG	1 cut(s)	435
TaaI	ACNGT	6 cut(s)	50, 964, 992, 1283, 1652, 1686
TaiI	ACGT	3 cut(s)	89, 1361, 1543
TaqI	TCGA	6 cut(s)	296, 489, 769, 943, 1671, 1728
TasI	AATT	2 cut(s)	104, 496
TatI	WGTACW	1 cut(s)	1575
TauI	GCSGC	5 cut(s)	136, 244, 247, 260, 273
TfiI	GAWTC	4 cut(s)	236, 298, 506, 1023
Tru1I	TTAA	3 cut(s)	959, 1089, 1813
Tru9I	TTAA	3 cut(s)	959, 1089, 1813
TscAI	CASTG	3 cut(s)	34, 43, 1338
TseFI	GTSAC	2 cut(s)	622, 1680
TseI	GCWGC	9 cut(s)	115, 367, 574, 979, 982, 1199, 1257, 1637, 1640
Tsp45I	GTSAC	2 cut(s)	622, 1680
TspDTI	ATGAA	4 cut(s)	583, 731, 832, 1566
TspGWI	ACGGA	3 cut(s)	435, 555, 587
TspRI	CASTG	3 cut(s)	34, 43, 1338
Tth111I	GACNNNGTC	1 cut(s)	948
VpaK11BI	GGWCC	4 cut(s)	328, 1114, 1170, 1617
XapI	RAATTY	1 cut(s)	496
XceI	RCATGY	3 cut(s)	836, 1241, 1576
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1011
XmiI	GTMKAC	2 cut(s)	909, 943
XspI	CTAG	3 cut(s)	276, 501, 1428
ZraI	GACGTC	1 cut(s)	87
Zsp2I	ATGCAT	1 cut(s)	1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.