Rroxscaffold_6G00419970

RING finger and transmembrane domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0003923
Physical Location & Seq
Forward (+)
41318885 .. 41323691
4807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00419970.1

Sequence Viewer

Length: 1416 bp
ATGGAAGCGCCAGGTGGCAATCATCTGGACTCGTATAGAGCTCCGGTTTCGAGCAATAGTAGTTCTAGAAGATATGGAATGCTATCTGCTTCCAATTTTATTCAGGCACCACTGTCTGCCTTGCTGGAGTACTCGGGCCTTCTGCGCGGCCGGTCCAGCCACCAAGAAGCCGAGTCTTTGATTGGGGGACGCAGCGCTGCCGCGTTCAGGGAGCACCATCACGGTCAGGTGGATCAATCGAGCAATGATGGGGAGGTTTCGATTAGGATAATTGGTGCAGGGGAGCAAGAGCATGATAGGGAAGGGGGTGGTTTAGTAGTTGGACAATTGAGGGAGAGTAGTCTTCTGCCAAATGATGTTTCCGGACAACCAATAGCTAGGGTGGGCTCTGTTACAGTGGTATCGGAGGAGGGTCAGGGAGATGGTAGAACGGATGTTGGTTCTGGAGAAGGCATGTCACAATCGATAAATGGTAGTGCTGATGGAGAAGCCGGTGATGGTTCTGGGGCTAATGGCAGGGATTCTTCATACCAGAGATATGATATTCAGCAGGCAGCTAGGTGGATTGAGCAGGTCCTGCCCTTTTCCTTGCTTCTATTGGTGGTCTTCATTCGCCAGCATTTGCAAGGTTTCTTTGTTACTATCTGGATTGCTGCTGTTATGTTTAAGTCGAATGATATCCTAAGGAAACAGACAGCTTTGAAGGGAGAGAGGAAAATCTCTGTTCTAGTCGGCATCTCTATTGCATTCGCAGTTCATGTGATTGGTGTTTACTGGTGGTATCAGAATGATGATCTTTTGTACCCATTAGTTATGCTTCCTCCCAAAGTTATACCGCCTTTCTGGCATGCTGTTTTTATCATCATGGTTAATGATACCTTGGTCCGGCAGGCAGCAATGGTGATCAAGTGTATTCTATTAATGTACTACAAGAACAGCAGAGGACGTAACTATCGTAAGCAGGGTCAAATGCTTACATTGGTTGAGTATCTACTTCTGTTGTACCGGGCCTTGTTACCAACACCAGTGTGGTATCGTTTCTTCTTGAACAAAGAATATGGTAGTCTCTTTTCTTCACTAATGACAGGGTTATATTTGACCTTCAAGCTTACGTCTGTTGTTGAGAAGGTACAATCTTTCTTTGCTGCATTGAAGGCCTTGTCACGTAAAGAGGTTCACTATGGGGCGTATGCAACATCAGAGCAGGTCAGTGCAGCTGGCGATCTTTGTGCTATCTGCCAGGAGAAAATGCATGCTCCTATCTTGCTTCGTTGTAAACACATCTTCTGTGAGGACTGTGTATCAGAGTGGTTTGAGAGGGAACGGACCTGCCCGTTGTGCAGGGCTTTGGTAAAACCTGCAGATCTTAGATCGTTTGGCGATGGATCAACGAGTTTGTTCTTCCAGCTGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3 zf-RING_2

Protein Analysis

471

Amino Acids

52.3

Weight (kDa)

7.63

Isoelectric Point (pI)

40.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 408 - 451 6.2e-10 Zinc finger, C3HC4 type (RING finger)
zf-RING_2 PF13639 409 - 448 1.9e-10 Ring finger domain
zf-C3HC4 PF00097 410 - 447 3.2e-09 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 410 - 447 6.4e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 410 - 445 7.9e-08 RING-type zinc-finger
zf-RING_5 PF14634 410 - 448 2.7e-07 zinc-RING finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 562, 1195, 1337, 1366
AccB1I GGYRCC 1 cut(s) 106
AccII CGCG 2 cut(s) 147, 203
AccIII TCCGGA 1 cut(s) 362
AciI CCGC 3 cut(s) 147, 201, 836
AclWI GGATC 2 cut(s) 240, 1393
AcoI YGGCCR 1 cut(s) 148
AfaI GTAC 5 cut(s) 131, 803, 926, 1004, 1131
AfeI AGCGCT 1 cut(s) 196
AfiI CCNNNNNNNGG 2 cut(s) 207, 885
AgsI TTSAA 4 cut(s) 703, 1048, 1105, 1153
AjnI CCWGG 2 cut(s) 10, 1239
AjuI GAANNNNNNNTTGG 2 cut(s) 343, 375
AleI CACNNNNGTG 1 cut(s) 1027
AluBI AGCT 7 cut(s) 41, 377, 557, 698, 1108, 1217, 1408
AluI AGCT 7 cut(s) 41, 377, 557, 698, 1108, 1217, 1408
Alw21I GWGCWC 2 cut(s) 43, 216
Alw26I GTCTC 1 cut(s) 1070
AlwI GGATC 2 cut(s) 240, 1393
AlwNI CAGNNNCTG 1 cut(s) 577
Ama87I CYCGRG 1 cut(s) 133
Aor13HI TCCGGA 1 cut(s) 362
Aor51HI AGCGCT 1 cut(s) 196
AoxI GGCC 4 cut(s) 136, 148, 1008, 1155
ApeKI GCWGC 7 cut(s) 192, 197, 554, 653, 893, 1145, 1214
AseI ATTAAT 1 cut(s) 920
AspLEI GCGC 3 cut(s) 10, 147, 197
AspS9I GGNCC 6 cut(s) 136, 153, 574, 883, 1008, 1326
AsuC2I CCSGG 1 cut(s) 1007
AsuHPI GGTGA 2 cut(s) 506, 913
AvaI CYCGRG 1 cut(s) 133
AvaII GGWCC 4 cut(s) 153, 574, 883, 1326
AxyI CCTNAGG 1 cut(s) 683
BaeI ACNNNNGTAYC 4 cut(s) 384, 417, 867, 900
BanI GGYRCC 1 cut(s) 106
BanII GRGCYC 2 cut(s) 43, 389
BarI GAAGNNNNNNTAC 2 cut(s) 1025, 1057
BbsI GAAGAC 2 cut(s) 335, 598
Bbv12I GWGCWC 2 cut(s) 43, 216
BbvI GCAGC 7 cut(s) 184, 204, 566, 640, 905, 1132, 1226
BccI CCATC 6 cut(s) 225, 242, 416, 476, 491, 1376
BcgI CGANNNNNNTGC 2 cut(s) 1211, 1245
BciT130I CCWGG 2 cut(s) 12, 1241
BclI TGATCA 1 cut(s) 903
BcnI CCSGG 1 cut(s) 1007
BcoDI GTCTC 1 cut(s) 1070
BfaI CTAG 4 cut(s) 66, 378, 558, 728
BfmI CTRYAG 1 cut(s) 1359
BfoI RGCGCY 2 cut(s) 11, 198
BfuAI ACCTGC 4 cut(s) 562, 1195, 1337, 1366
BglI GCCNNNNNGGC 1 cut(s) 844
BglII AGATCT 1 cut(s) 1363
BisI GCNGC 9 cut(s) 148, 193, 198, 201, 555, 654, 894, 1146, 1215
BlsI GCNGC 9 cut(s) 149, 194, 199, 202, 556, 655, 895, 1147, 1216
BmcAI AGTACT 1 cut(s) 131
Bme1390I CCNGG 3 cut(s) 12, 1007, 1241
Bme18I GGWCC 4 cut(s) 153, 574, 883, 1326
BmeT110I CYCGRG 1 cut(s) 133
BmgT120I GGNCC 6 cut(s) 136, 153, 574, 883, 1008, 1326
BmiI GGNNCC 1 cut(s) 108
BmrFI CCNGG 3 cut(s) 12, 1007, 1241
BmsI GCATC 1 cut(s) 744
BpiI GAAGAC 2 cut(s) 335, 598
BpmI CTGGAG 2 cut(s) 146, 465
BpuMI CCSGG 1 cut(s) 1007
Bsa29I ATCGAT 1 cut(s) 464
BsaAI YACGTR 1 cut(s) 1166
BsaJI CCNNGG 1 cut(s) 879
BsaWI WCCGGW 2 cut(s) 43, 362
Bsc4I CCNNNNNNNGG 2 cut(s) 207, 885
Bse118I RCCGGY 2 cut(s) 150, 491
Bse1I ACTGG 2 cut(s) 779, 1025
Bse21I CCTNAGG 1 cut(s) 683
Bse3DI GCAATG 2 cut(s) 250, 903
BseAI TCCGGA 1 cut(s) 362
BseBI CCWGG 2 cut(s) 12, 1241
BseCI ATCGAT 1 cut(s) 464
BseDI CCNNGG 1 cut(s) 879
BseGI GGATG 1 cut(s) 439
BseLI CCNNNNNNNGG 2 cut(s) 207, 885
BseMI GCAATG 2 cut(s) 250, 903
BseNI ACTGG 2 cut(s) 779, 1025
BseRI GAGGAG 1 cut(s) 422
BseX3I CGGCCG 1 cut(s) 148
BseXI GCAGC 7 cut(s) 184, 204, 566, 640, 905, 1132, 1226
BsgI GTGCAG 3 cut(s) 297, 1233, 1360
Bsh1236I CGCG 2 cut(s) 147, 203
Bsh1285I CGRYCG 1 cut(s) 151
BshFI GGCC 4 cut(s) 138, 150, 1010, 1157
BshNI GGYRCC 1 cut(s) 106
BshVI ATCGAT 1 cut(s) 464
BsiEI CGRYCG 1 cut(s) 151
BsiHKAI GWGCWC 2 cut(s) 43, 216
BsiHKCI CYCGRG 1 cut(s) 133
BsiSI CCGG 6 cut(s) 44, 151, 363, 492, 886, 1006
BslFI GGGAC 1 cut(s) 201
BslI CCNNNNNNNGG 2 cut(s) 207, 885
BsmAI GTCTC 1 cut(s) 1070
BsmFI GGGAC 1 cut(s) 201
BsmI GAATGC 2 cut(s) 84, 746
BsnI GGCC 4 cut(s) 138, 150, 1010, 1157
BsoBI CYCGRG 1 cut(s) 133
Bsp1286I GDGCHC 3 cut(s) 43, 216, 389
Bsp13I TCCGGA 1 cut(s) 362
Bsp143I GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
BspACI CCGC 3 cut(s) 147, 201, 836
BspANI GGCC 4 cut(s) 138, 150, 1010, 1157
BspDI ATCGAT 1 cut(s) 464
BspEI TCCGGA 1 cut(s) 362
BspFNI CGCG 2 cut(s) 147, 203
BspLI GGNNCC 1 cut(s) 108
BspMAI CTGCAG 1 cut(s) 1363
BspMI ACCTGC 4 cut(s) 562, 1195, 1337, 1366
BspPI GGATC 2 cut(s) 240, 1393
BspT107I GGYRCC 1 cut(s) 106
BsrDI GCAATG 2 cut(s) 250, 903
BsrFI RCCGGY 2 cut(s) 150, 491
BsrI ACTGG 2 cut(s) 779, 1025
BssAI RCCGGY 2 cut(s) 150, 491
BssECI CCNNGG 1 cut(s) 879
BssMI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
BssT1I CCWWGG 1 cut(s) 879
Bst2UI CCWGG 2 cut(s) 12, 1241
Bst4CI ACNGT 4 cut(s) 114, 224, 397, 1298
BstAPI GCANNNNNTGC 1 cut(s) 577
BstBAI YACGTR 1 cut(s) 1166
BstC8I GCNNGC 6 cut(s) 552, 617, 849, 891, 1219, 1254
BstDEI CTNAG 2 cut(s) 683, 1367
BstF5I GGATG 1 cut(s) 439
BstFNI CGCG 2 cut(s) 147, 203
BstH2I RGCGCY 2 cut(s) 11, 198
BstHHI GCGC 3 cut(s) 10, 147, 197
BstKTI GATC 7 cut(s) 235, 796, 906, 1225, 1366, 1373, 1388
BstMAI GTCTC 1 cut(s) 1070
BstMBI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
BstMCI CGRYCG 1 cut(s) 151
BstMWI GCNNNNNNNGC 6 cut(s) 144, 156, 577, 844, 1154, 1338
BstNI CCWGG 2 cut(s) 12, 1241
BstNSI RCATGY 3 cut(s) 457, 851, 1256
BstSCI CCNGG 3 cut(s) 10, 1005, 1239
BstSFI CTRYAG 1 cut(s) 1359
BstUI CGCG 2 cut(s) 147, 203
BstV1I GCAGC 7 cut(s) 184, 204, 566, 640, 905, 1132, 1226
BstV2I GAAGAC 2 cut(s) 335, 598
BstX2I RGATCY 1 cut(s) 1363
BstYI RGATCY 1 cut(s) 1363
BstZI CGGCCG 1 cut(s) 148
Bsu15I ATCGAT 1 cut(s) 464
Bsu36I CCTNAGG 1 cut(s) 683
BsuRI GGCC 4 cut(s) 138, 150, 1010, 1157
BsuTUI ATCGAT 1 cut(s) 464
BtgZI GCGATG 1 cut(s) 1395
BtsCI GGATG 1 cut(s) 439
BtsIMutI CAGTG 4 cut(s) 110, 402, 1032, 1216
BveI ACCTGC 4 cut(s) 562, 1195, 1337, 1366
Cac8I GCNNGC 6 cut(s) 552, 617, 849, 891, 1219, 1254
CaiI CAGNNNCTG 1 cut(s) 577
CfoI GCGC 3 cut(s) 10, 147, 197
Cfr10I RCCGGY 2 cut(s) 150, 491
Cfr13I GGNCC 6 cut(s) 136, 153, 574, 883, 1008, 1326
ClaI ATCGAT 1 cut(s) 464
CseI GACGC 1 cut(s) 198
Csp6I GTAC 5 cut(s) 130, 802, 925, 1003, 1130
CviAII CATG 6 cut(s) 293, 454, 758, 848, 865, 1253
CviQI GTAC 5 cut(s) 130, 802, 925, 1003, 1130
DdeI CTNAG 2 cut(s) 683, 1367
DpnI GATC 7 cut(s) 234, 795, 905, 1224, 1365, 1372, 1387
DpnII GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
EaeI YGGCCR 1 cut(s) 148
EagI CGGCCG 1 cut(s) 148
Ecl136II GAGCTC 1 cut(s) 41
EclXI CGGCCG 1 cut(s) 148
Eco130I CCWWGG 1 cut(s) 879
Eco147I AGGCCT 1 cut(s) 1157
Eco24I GRGCYC 2 cut(s) 43, 389
Eco32I GATATC 1 cut(s) 679
Eco47I GGWCC 4 cut(s) 153, 574, 883, 1326
Eco47III AGCGCT 1 cut(s) 196
Eco52I CGGCCG 1 cut(s) 148
Eco53kI GAGCTC 1 cut(s) 41
Eco81I CCTNAGG 1 cut(s) 683
Eco88I CYCGRG 1 cut(s) 133
EcoICRI GAGCTC 1 cut(s) 41
EcoO109I RGGNCCY 1 cut(s) 574
EcoRII CCWGG 2 cut(s) 10, 1239
EcoRV GATATC 1 cut(s) 679
EcoT14I CCWWGG 1 cut(s) 879
EcoT22I ATGCAT 1 cut(s) 1254
EcoT38I GRGCYC 2 cut(s) 43, 389
ErhI CCWWGG 1 cut(s) 879
FaeI CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
FaqI GGGAC 1 cut(s) 201
FatI CATG 6 cut(s) 292, 453, 757, 847, 864, 1252
FbaI TGATCA 1 cut(s) 903
Fnu4HI GCNGC 9 cut(s) 148, 193, 198, 201, 555, 654, 894, 1146, 1215
FokI GGATG 1 cut(s) 446
FriOI GRGCYC 2 cut(s) 43, 389
Fsp4HI GCNGC 9 cut(s) 148, 193, 198, 201, 555, 654, 894, 1146, 1215
FspBI CTAG 4 cut(s) 66, 378, 558, 728
GlaI GCGC 3 cut(s) 9, 146, 196
GluI GCNGC 9 cut(s) 148, 193, 198, 201, 555, 654, 894, 1146, 1215
GsuI CTGGAG 2 cut(s) 146, 465
HaeII RGCGCY 2 cut(s) 11, 198
HaeIII GGCC 4 cut(s) 138, 150, 1010, 1157
HapII CCGG 6 cut(s) 44, 151, 363, 492, 886, 1006
HgaI GACGC 1 cut(s) 198
HhaI GCGC 3 cut(s) 10, 147, 197
Hin1II CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
Hin6I GCGC 3 cut(s) 8, 145, 195
HinP1I GCGC 3 cut(s) 8, 145, 195
HindIII AAGCTT 1 cut(s) 1106
HinfI GANTC 3 cut(s) 29, 173, 521
HpaII CCGG 6 cut(s) 44, 151, 363, 492, 886, 1006
HphI GGTGA 2 cut(s) 506, 913
Hpy166II GTNNAC 3 cut(s) 772, 1177, 1277
Hpy188I TCNGA 4 cut(s) 406, 786, 1201, 1306
Hpy188III TCNNGA 6 cut(s) 26, 66, 363, 444, 646, 1045
Hpy8I GTNNAC 3 cut(s) 772, 1177, 1277
HpyAV CCTTC 7 cut(s) 149, 296, 443, 697, 1111, 1120, 1147
HpyCH4III ACNGT 4 cut(s) 114, 224, 397, 1298
HpyCH4IV ACGT 3 cut(s) 946, 1112, 1165
HpyCH4V TGCA 9 cut(s) 278, 625, 746, 1148, 1193, 1214, 1252, 1341, 1361
HpyF10VI GCNNNNNNNGC 6 cut(s) 144, 156, 577, 844, 1154, 1338
HpyF3I CTNAG 2 cut(s) 683, 1367
HpySE526I ACGT 3 cut(s) 946, 1112, 1165
Hsp92II CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
HspAI GCGC 3 cut(s) 8, 145, 195
Kpn2I TCCGGA 1 cut(s) 362
Ksp22I TGATCA 1 cut(s) 903
Kzo9I GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
LmnI GCTCC 4 cut(s) 46, 211, 283, 1261
Lsp1109I GCAGC 7 cut(s) 184, 204, 566, 640, 905, 1132, 1226
LweI GCATC 1 cut(s) 744
MaeI CTAG 4 cut(s) 66, 378, 558, 728
MaeII ACGT 3 cut(s) 946, 1112, 1165
MaeIII GTNAC 6 cut(s) 391, 456, 637, 947, 1014, 1161
MalI GATC 7 cut(s) 234, 795, 905, 1224, 1365, 1372, 1387
MboI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
MboII GAAGA 8 cut(s) 81, 335, 516, 598, 1033, 1065, 1276, 1393
MfeI CAATTG 1 cut(s) 326
MflI RGATCY 1 cut(s) 1363
MhlI GDGCHC 3 cut(s) 43, 216, 389
MluCI AATT 3 cut(s) 94, 270, 326
MlyI GAGTC 2 cut(s) 23, 182
MmeI TCCRAC 1 cut(s) 301
Mph1103I ATGCAT 1 cut(s) 1254
MroI TCCGGA 1 cut(s) 362
MseI TTAA 4 cut(s) 666, 870, 920, 1414
MslI CAYNNNNRTG 1 cut(s) 1027
MspA1I CMGCKG 2 cut(s) 1217, 1408
MspI CCGG 6 cut(s) 44, 151, 363, 492, 886, 1006
MspR9I CCNGG 3 cut(s) 12, 1007, 1241
MunI CAATTG 1 cut(s) 326
Mva1269I GAATGC 2 cut(s) 84, 746
MvaI CCWGG 2 cut(s) 12, 1241
MvnI CGCG 2 cut(s) 147, 203
MwoI GCNNNNNNNGC 6 cut(s) 144, 156, 577, 844, 1154, 1338
NciI CCSGG 1 cut(s) 1007
NdeII GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
NlaIII CATG 6 cut(s) 296, 457, 761, 851, 868, 1256
NlaIV GGNNCC 1 cut(s) 108
NmeAIII GCCGAG 1 cut(s) 196
NmuCI GTSAC 2 cut(s) 456, 1161
NsiI ATGCAT 1 cut(s) 1254
NspI RCATGY 3 cut(s) 457, 851, 1256
OliI CACNNNNGTG 1 cut(s) 1027
PaeI GCATGC 2 cut(s) 851, 1256
PceI AGGCCT 1 cut(s) 1157
PcsI WCGNNNNNNNCGW 1 cut(s) 952
PctI GAATGC 2 cut(s) 84, 746
PfeI GAWTC 1 cut(s) 521
PkrI GCNGC 9 cut(s) 149, 194, 199, 202, 556, 655, 895, 1147, 1216
PleI GAGTC 2 cut(s) 23, 181
PpsI GAGTC 2 cut(s) 23, 181
Ppu21I YACGTR 1 cut(s) 1166
PpuMI RGGWCCY 1 cut(s) 574
PshBI ATTAAT 1 cut(s) 920
Psp124BI GAGCTC 1 cut(s) 43
Psp5II RGGWCCY 1 cut(s) 574
Psp6I CCWGG 2 cut(s) 10, 1239
PspGI CCWGG 2 cut(s) 10, 1239
PspN4I GGNNCC 1 cut(s) 108
PspPI GGNCC 6 cut(s) 136, 153, 574, 883, 1008, 1326
PspPPI RGGWCCY 1 cut(s) 574
PstI CTGCAG 1 cut(s) 1363
PstNI CAGNNNCTG 1 cut(s) 577
PsuI RGATCY 1 cut(s) 1363
PvuII CAGCTG 2 cut(s) 1217, 1408
RsaI GTAC 5 cut(s) 131, 803, 926, 1004, 1131
RsaNI GTAC 5 cut(s) 130, 802, 925, 1003, 1130
RseI CAYNNNNRTG 1 cut(s) 1027
SacI GAGCTC 1 cut(s) 43
SaqAI TTAA 4 cut(s) 666, 870, 920, 1414
SatI GCNGC 9 cut(s) 148, 193, 198, 201, 555, 654, 894, 1146, 1215
Sau3AI GATC 7 cut(s) 232, 793, 903, 1222, 1363, 1370, 1385
Sau96I GGNCC 6 cut(s) 136, 153, 574, 883, 1008, 1326
ScaI AGTACT 1 cut(s) 131
SchI GAGTC 2 cut(s) 23, 182
ScrFI CCNGG 3 cut(s) 12, 1007, 1241
SduI GDGCHC 3 cut(s) 43, 216, 389
SfaNI GCATC 1 cut(s) 744
SfcI CTRYAG 1 cut(s) 1359
SinI GGWCC 4 cut(s) 153, 574, 883, 1326
SmiMI CAYNNNNRTG 1 cut(s) 1027
SphI GCATGC 2 cut(s) 851, 1256
Sse9I AATT 3 cut(s) 94, 270, 326
SseBI AGGCCT 1 cut(s) 1157
SsiI CCGC 3 cut(s) 147, 201, 836
SspMI CTAG 4 cut(s) 66, 378, 558, 728
SstI GAGCTC 1 cut(s) 43
StuI AGGCCT 1 cut(s) 1157
StyD4I CCNGG 3 cut(s) 10, 1005, 1239
StyI CCWWGG 1 cut(s) 879
TaaI ACNGT 4 cut(s) 114, 224, 397, 1298
TaiI ACGT 3 cut(s) 949, 1115, 1168
TaqI TCGA 5 cut(s) 50, 239, 260, 464, 671
TasI AATT 3 cut(s) 94, 270, 326
TatI WGTACW 2 cut(s) 129, 924
TauI GCSGC 2 cut(s) 150, 203
TfiI GAWTC 1 cut(s) 521
Tru1I TTAA 4 cut(s) 666, 870, 920, 1414
Tru9I TTAA 4 cut(s) 666, 870, 920, 1414
TscAI CASTG 4 cut(s) 117, 402, 1032, 1216
TseFI GTSAC 2 cut(s) 456, 1161
TseI GCWGC 7 cut(s) 192, 197, 554, 653, 893, 1145, 1214
Tsp45I GTSAC 2 cut(s) 456, 1161
TspDTI ATGAA 3 cut(s) 516, 598, 746
TspGWI ACGGA 2 cut(s) 446, 1339
TspRI CASTG 4 cut(s) 117, 402, 1032, 1216
VpaK11BI GGWCC 4 cut(s) 153, 574, 883, 1326
VspI ATTAAT 1 cut(s) 920
XbaI TCTAGA 1 cut(s) 65
XceI RCATGY 3 cut(s) 457, 851, 1256
XcmI CCANNNNNNNNNTGG 1 cut(s) 1026
XspI CTAG 4 cut(s) 66, 378, 558, 728
ZrmI AGTACT 1 cut(s) 131
Zsp2I ATGCAT 1 cut(s) 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.