MD12G1193700.v1.1

RING finger and transmembrane domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0003923
Physical Location & Seq
Forward (+)
27523921 .. 27529054
5134 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1193700.v1.1.491

Sequence Viewer

Length: 1521 bp
ATGCTATCTCTCTCCCCTGACAACTCCATCGCCGGTTCGCTTACGCAGTATTTAATATTGTGTGATATGGCTGTGGTTAGGGTTAGGGCAATTAGGCAAATGGAAGGGTCGGGTGGCAATCTTGACTCGTTAAGAGCTTCTCCGGGAAGCAGTAGTAATAGGAGATATGGGGTGTTATCGGCTTCCAATATCATTCGGGCGCCAATTTCTACCTTATTGGAGTACTCGGGTATTCTCCGCGGCCGCTCTAATCACCAAGAAGCTGAGTCTTTGATTAACGGGCGTAGCGCTGCTGCGTTCAGGGATCACCATCATAGTCAGCTAGACCAATCACCGACGACAAGCAATGATGGGGAGGTTTCTATTAGGATAATTGGTGCAGGGGAACAGGAGCATGATAGGGAAGGACCTGGGATAGTATCTGGACCGCTGAGGGAAGTTACTGTACCGCCAAATGATGTTTCTGCACCACCAATGGCTGGAGTGGCTACTGTAGCGTTGGGAACTGAGGTTGTGGGTCAGACAGATGGCAGAACAGATCGTACTTCGGGAGAGGGCATTCCCCAATCGTTAAATGGAAGTGCTGATGGAGAAGGAGGTGATGGAACAGGGGCTAATGGCAGGGATTCTTCTTACCAGAGATATGACATTCAGCAGGCTGCTAGGGGTATTGAACAAGTCCTGCCCTTTTCCTTGCTTCTATTGGTGGTCTTCATCCGCCAGCATTTGCAAGGTTTCTTTGTTACAATTTGGATTGCTGCTGTTATGTTCAAGTCAAATGATATATTGAGGAAACAGACAGCTTTGAAGGGAGAGAGGAAAATCACGGTTCTAATGGGCATCTCTCTTGCATTCGCATTGCATGTGGTTGGTGTTTACTGGTGGTTCCAGAATGACGATCTTTTGTACCCACTAATTATGCTTCCTCCTAAAGTTATACCACCCTTCTGGCATGCTGTTTTCATCATCACGGTGAATGACTCCTTGGTCCGTCAGGCAGCAATGGTGCTGAAGTGTTTGATATTAATGTACTACAAAAACAGTAGAGGCCGAAACTATCGTAAGCAGGGTCAAATGCTTACTCTGGTTGAGTATCTACTGCTCTTGTACCGTGCCTTGTTGCCAACACCAGTGTGGTACCGGTTCTTCTTGAACAAAGAATATGGGAGTCTCTTTTCGTCACTAATGACAGGGTTATATTTGACTTTCAAGCTAACATCTGTTGTCGAGAAGGTGCAATCCTTCTTTGCTGCATTGAAGGCATTGTCACGAAAAGAGGTGCACTATGGGGCATATGCAACTTCAGAACAGGTCAATGCAGCAGGTGATCTATGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTTCGATGTAAACACATCTTTTGCGAGGACTGCGTATCAGAGTGGTTTGAGAGGGAACGGACGTGTCCGTTGTGCAGAGCTCTGGTAAAACCTGCAGATCTAAGATCATTCGGCGATGGATCAACGAGTTTGTTTTTCCAGCTGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3 zf-RING_2

Protein Analysis

507

Amino Acids

55.97

Weight (kDa)

8.48

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 442 - 483 6.7e-06 RING-H2 zinc finger domain
zf-C3HC4_3 PF13920 443 - 486 6.9e-10 Zinc finger, C3HC4 type (RING finger)
zf-RING_2 PF13639 444 - 483 2.1e-10 Ring finger domain
zf-C3HC4 PF00097 445 - 482 3.5e-09 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 445 - 482 7e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 445 - 480 8.7e-08 RING-type zinc-finger
zf-RING_5 PF14634 445 - 483 3e-07 zinc-RING finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1313
AasI GACNNNNNNGTC 1 cut(s) 986
Acc36I ACCTGC 2 cut(s) 1313, 1471
Acc65I GGTACC 1 cut(s) 1137
AccB1I GGYRCC 2 cut(s) 199, 1137
AccB7I CCANNNNNTGG 1 cut(s) 479
AccBSI CCGCTC 1 cut(s) 246
AccII CGCG 1 cut(s) 240
AciI CCGC 6 cut(s) 238, 240, 244, 428, 449, 718
AclWI GGATC 2 cut(s) 312, 1498
AcoI YGGCCR 1 cut(s) 241
AcuI CTGAAG 2 cut(s) 1031, 1287
AcyI GRCGYC 1 cut(s) 200
AfaI GTAC 7 cut(s) 224, 447, 544, 908, 1031, 1109, 1139
AfeI AGCGCT 1 cut(s) 289
AfiI CCNNNNNNNGG 1 cut(s) 479
AflIII ACRYGT 1 cut(s) 1433
AgeI ACCGGT 1 cut(s) 1140
AgsI TTSAA 6 cut(s) 674, 772, 808, 1153, 1210, 1258
AjiI CACGTC 1 cut(s) 1434
AjnI CCWGG 1 cut(s) 409
AjuI GAANNNNNNNTTGG 4 cut(s) 445, 477, 968, 1000
AleI CACNNNNGTG 1 cut(s) 1132
AluBI AGCT 7 cut(s) 137, 263, 322, 803, 1213, 1451, 1513
AluI AGCT 7 cut(s) 137, 263, 322, 803, 1213, 1451, 1513
Alw21I GWGCWC 2 cut(s) 1284, 1453
Alw26I GTCTC 1 cut(s) 1175
Alw44I GTGCAC 1 cut(s) 1280
AlwI GGATC 2 cut(s) 312, 1498
Ama87I CYCGRG 1 cut(s) 226
Aor51HI AGCGCT 1 cut(s) 289
AoxI GGCC 2 cut(s) 241, 1048
ApaLI GTGCAC 1 cut(s) 1280
ApeKI GCWGC 7 cut(s) 290, 293, 659, 758, 998, 1250, 1319
AseI ATTAAT 1 cut(s) 1025
AsiGI ACCGGT 1 cut(s) 1140
Asp718I GGTACC 1 cut(s) 1137
AspLEI GCGC 2 cut(s) 202, 290
AspS9I GGNCC 3 cut(s) 407, 425, 988
AsuC2I CCSGG 1 cut(s) 144
AsuHPI GGTGA 6 cut(s) 245, 299, 324, 611, 985, 1337
AvaI CYCGRG 1 cut(s) 226
AvaII GGWCC 3 cut(s) 407, 425, 988
BaeGI GKGCMC 1 cut(s) 1284
BanI GGYRCC 2 cut(s) 199, 1137
BanII GRGCYC 1 cut(s) 1453
BarI GAAGNNNNNNTAC 4 cut(s) 429, 461, 1130, 1162
BbsI GAAGAC 1 cut(s) 703
Bbv12I GWGCWC 2 cut(s) 1284, 1453
BbvCI CCTCAGC 1 cut(s) 431
BbvI GCAGC 7 cut(s) 277, 280, 646, 745, 1010, 1237, 1331
BccI CCATC 7 cut(s) 35, 318, 344, 521, 581, 596, 1481
BciT130I CCWGG 1 cut(s) 411
BcnI CCSGG 1 cut(s) 144
BcoDI GTCTC 1 cut(s) 1175
BfaI CTAG 2 cut(s) 323, 663
BfmI CTRYAG 2 cut(s) 492, 1464
BfoI RGCGCY 2 cut(s) 203, 291
BfuAI ACCTGC 2 cut(s) 1313, 1471
BglII AGATCT 1 cut(s) 1468
BisI GCNGC 9 cut(s) 241, 244, 291, 294, 660, 759, 999, 1251, 1320
BlsI GCNGC 9 cut(s) 242, 245, 292, 295, 661, 760, 1000, 1252, 1321
BmcAI AGTACT 1 cut(s) 224
Bme1390I CCNGG 2 cut(s) 144, 411
Bme18I GGWCC 3 cut(s) 407, 425, 988
BmeT110I CYCGRG 1 cut(s) 226
BmgBI CACGTC 1 cut(s) 1434
BmgT120I GGNCC 3 cut(s) 407, 425, 988
BmiI GGNNCC 3 cut(s) 201, 887, 1139
BmrFI CCNGG 2 cut(s) 144, 411
BmsI GCATC 2 cut(s) 849, 1344
BpiI GAAGAC 1 cut(s) 703
BpmI CTGGAG 1 cut(s) 501
Bpu10I CCTNAGC 1 cut(s) 431
BpuMI CCSGG 1 cut(s) 144
BsaBI GATNNNNATC 1 cut(s) 309
BsaHI GRCGYC 1 cut(s) 200
BsaJI CCNNGG 3 cut(s) 238, 410, 984
BsaWI WCCGGW 1 cut(s) 1140
Bsc4I CCNNNNNNNGG 1 cut(s) 479
Bse118I RCCGGY 2 cut(s) 32, 1140
Bse1I ACTGG 2 cut(s) 884, 1130
Bse3DI GCAATG 3 cut(s) 352, 857, 1008
Bse8I GATNNNNATC 1 cut(s) 309
BseBI CCWGG 1 cut(s) 411
BseDI CCNNGG 3 cut(s) 238, 410, 984
BseGI GGATG 1 cut(s) 714
BseJI GATNNNNATC 1 cut(s) 309
BseLI CCNNNNNNNGG 1 cut(s) 479
BseMI GCAATG 3 cut(s) 352, 857, 1008
BseMII CTCAG 3 cut(s) 255, 422, 498
BseNI ACTGG 2 cut(s) 884, 1130
BseSI GKGCMC 1 cut(s) 1284
BseX3I CGGCCG 1 cut(s) 241
BseXI GCAGC 7 cut(s) 277, 280, 646, 745, 1010, 1237, 1331
BsgI GTGCAG 3 cut(s) 399, 450, 1465
Bsh1236I CGCG 1 cut(s) 240
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 2 cut(s) 243, 1050
BshNI GGYRCC 2 cut(s) 199, 1137
BshTI ACCGGT 1 cut(s) 1140
BsiEI CGRYCG 1 cut(s) 244
BsiHKAI GWGCWC 2 cut(s) 1284, 1453
BsiHKCI CYCGRG 1 cut(s) 226
BsiSI CCGG 3 cut(s) 33, 143, 1141
BslI CCNNNNNNNGG 1 cut(s) 479
BsmAI GTCTC 1 cut(s) 1175
BsmI GAATGC 2 cut(s) 558, 851
BsnI GGCC 2 cut(s) 243, 1050
BsoBI CYCGRG 1 cut(s) 226
Bsp1286I GDGCHC 2 cut(s) 1284, 1453
Bsp143I GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
BspACI CCGC 6 cut(s) 238, 240, 244, 428, 449, 718
BspANI GGCC 2 cut(s) 243, 1050
BspCNI CTCAG 3 cut(s) 256, 423, 499
BspFNI CGCG 1 cut(s) 240
BspLI GGNNCC 3 cut(s) 201, 887, 1139
BspMAI CTGCAG 1 cut(s) 1468
BspMI ACCTGC 2 cut(s) 1313, 1471
BspPI GGATC 2 cut(s) 312, 1498
BspT107I GGYRCC 2 cut(s) 199, 1137
BsrBI CCGCTC 1 cut(s) 246
BsrDI GCAATG 3 cut(s) 352, 857, 1008
BsrFI RCCGGY 2 cut(s) 32, 1140
BsrI ACTGG 2 cut(s) 884, 1130
BssAI RCCGGY 2 cut(s) 32, 1140
BssECI CCNNGG 3 cut(s) 238, 410, 984
BssMI GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
BssNI GRCGYC 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 984
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 6 cut(s) 445, 493, 829, 973, 1043, 1112
BstACI GRCGYC 1 cut(s) 200
BstC8I GCNNGC 4 cut(s) 657, 722, 954, 1359
BstDEI CTNAG 4 cut(s) 264, 431, 507, 1472
BstDSI CCRYGG 1 cut(s) 238
BstF5I GGATG 1 cut(s) 714
BstFNI CGCG 1 cut(s) 240
BstH2I RGCGCY 2 cut(s) 203, 291
BstHHI GCGC 2 cut(s) 202, 290
BstKTI GATC 7 cut(s) 307, 541, 901, 1330, 1471, 1478, 1493
BstMAI GTCTC 1 cut(s) 1175
BstMBI GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
BstMCI CGRYCG 1 cut(s) 244
BstMWI GCNNNNNNNGC 4 cut(s) 485, 494, 1259, 1401
BstNI CCWGG 1 cut(s) 411
BstNSI RCATGY 3 cut(s) 866, 956, 1361
BstSCI CCNGG 2 cut(s) 142, 409
BstSFI CTRYAG 2 cut(s) 492, 1464
BstSLI GKGCMC 1 cut(s) 1284
BstUI CGCG 1 cut(s) 240
BstV1I GCAGC 7 cut(s) 277, 280, 646, 745, 1010, 1237, 1331
BstV2I GAAGAC 1 cut(s) 703
BstX2I RGATCY 1 cut(s) 1468
BstXI CCANNNNNNTGG 1 cut(s) 948
BstYI RGATCY 1 cut(s) 1468
BstZI CGGCCG 1 cut(s) 241
BsuRI GGCC 2 cut(s) 243, 1050
BtgI CCRYGG 1 cut(s) 238
BtgZI GCGATG 2 cut(s) 13, 1500
BtrI CACGTC 1 cut(s) 1434
BtsCI GGATG 1 cut(s) 714
BtsIMutI CAGTG 1 cut(s) 1137
BveI ACCTGC 2 cut(s) 1313, 1471
Cac8I GCNNGC 4 cut(s) 657, 722, 954, 1359
CciNI GCGGCCGC 1 cut(s) 241
CfoI GCGC 2 cut(s) 202, 290
Cfr10I RCCGGY 2 cut(s) 32, 1140
Cfr13I GGNCC 3 cut(s) 407, 425, 988
Cfr42I CCGCGG 1 cut(s) 241
Csp6I GTAC 7 cut(s) 223, 446, 543, 907, 1030, 1108, 1138
CspAI ACCGGT 1 cut(s) 1140
CviAII CATG 4 cut(s) 395, 863, 953, 1358
CviQI GTAC 7 cut(s) 223, 446, 543, 907, 1030, 1108, 1138
DdeI CTNAG 4 cut(s) 264, 431, 507, 1472
DinI GGCGCC 1 cut(s) 201
DpnI GATC 7 cut(s) 306, 540, 900, 1329, 1470, 1477, 1492
DpnII GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
DrdI GACNNNNNNGTC 1 cut(s) 986
DseDI GACNNNNNNGTC 1 cut(s) 986
EaeI YGGCCR 1 cut(s) 241
EagI CGGCCG 1 cut(s) 241
EciI GGCGGA 1 cut(s) 707
Ecl136II GAGCTC 1 cut(s) 1451
EclXI CGGCCG 1 cut(s) 241
Eco130I CCWWGG 1 cut(s) 984
Eco24I GRGCYC 1 cut(s) 1453
Eco47I GGWCC 3 cut(s) 407, 425, 988
Eco47III AGCGCT 1 cut(s) 289
Eco52I CGGCCG 1 cut(s) 241
Eco53kI GAGCTC 1 cut(s) 1451
Eco57I CTGAAG 2 cut(s) 1031, 1287
Eco88I CYCGRG 1 cut(s) 226
EcoICRI GAGCTC 1 cut(s) 1451
EcoO109I RGGNCCY 1 cut(s) 407
EcoRII CCWGG 1 cut(s) 409
EcoT14I CCWWGG 1 cut(s) 984
EcoT22I ATGCAT 1 cut(s) 1359
EcoT38I GRGCYC 1 cut(s) 1453
EgeI GGCGCC 1 cut(s) 201
EheI GGCGCC 1 cut(s) 201
ErhI CCWWGG 1 cut(s) 984
FaeI CATG 4 cut(s) 398, 866, 956, 1361
FatI CATG 4 cut(s) 394, 862, 952, 1357
FauNDI CATATG 1 cut(s) 1294
Fnu4HI GCNGC 9 cut(s) 241, 244, 291, 294, 660, 759, 999, 1251, 1320
FokI GGATG 1 cut(s) 701
FriOI GRGCYC 1 cut(s) 1453
Fsp4HI GCNGC 9 cut(s) 241, 244, 291, 294, 660, 759, 999, 1251, 1320
FspBI CTAG 2 cut(s) 323, 663
GlaI GCGC 2 cut(s) 201, 289
GluI GCNGC 9 cut(s) 241, 244, 291, 294, 660, 759, 999, 1251, 1320
GsuI CTGGAG 1 cut(s) 501
HaeII RGCGCY 2 cut(s) 203, 291
HaeIII GGCC 2 cut(s) 243, 1050
HapII CCGG 3 cut(s) 33, 143, 1141
HhaI GCGC 2 cut(s) 202, 290
Hin1I GRCGYC 1 cut(s) 200
Hin1II CATG 4 cut(s) 398, 866, 956, 1361
Hin6I GCGC 2 cut(s) 200, 288
HinP1I GCGC 2 cut(s) 200, 288
HinfI GANTC 5 cut(s) 125, 266, 626, 980, 1168
HpaII CCGG 3 cut(s) 33, 143, 1141
HphI GGTGA 6 cut(s) 245, 299, 324, 611, 985, 1337
Hpy166II GTNNAC 3 cut(s) 877, 1282, 1382
Hpy188I TCNGA 3 cut(s) 522, 1306, 1411
Hpy188III TCNNGA 7 cut(s) 122, 423, 549, 889, 1150, 1228, 1269
Hpy8I GTNNAC 3 cut(s) 877, 1282, 1382
Hpy99I CGWCG 1 cut(s) 340
HpyAV CCTTC 8 cut(s) 98, 398, 587, 802, 955, 1225, 1252, 1252
HpyCH4III ACNGT 6 cut(s) 445, 493, 829, 973, 1043, 1112
HpyCH4IV ACGT 1 cut(s) 1433
HpyF10VI GCNNNNNNNGC 4 cut(s) 485, 494, 1259, 1401
HpyF3I CTNAG 4 cut(s) 264, 431, 507, 1472
HpySE526I ACGT 1 cut(s) 1433
Hsp92I GRCGYC 1 cut(s) 200
Hsp92II CATG 4 cut(s) 398, 866, 956, 1361
HspAI GCGC 2 cut(s) 200, 288
KasI GGCGCC 1 cut(s) 199
KpnI GGTACC 1 cut(s) 1141
KspI CCGCGG 1 cut(s) 241
Kzo9I GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
LmnI GCTCC 2 cut(s) 391, 1366
Lsp1109I GCAGC 7 cut(s) 277, 280, 646, 745, 1010, 1237, 1331
LweI GCATC 2 cut(s) 849, 1344
MaeI CTAG 2 cut(s) 323, 663
MaeII ACGT 1 cut(s) 1433
MaeIII GTNAC 4 cut(s) 439, 742, 1179, 1266
MalI GATC 7 cut(s) 306, 540, 900, 1329, 1470, 1477, 1492
MbiI CCGCTC 1 cut(s) 246
MboI GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
MboII GAAGA 4 cut(s) 621, 703, 1138, 1363
MflI RGATCY 1 cut(s) 1468
MhlI GDGCHC 2 cut(s) 1284, 1453
MluCI AATT 5 cut(s) 90, 204, 372, 747, 915
Mly113I GGCGCC 1 cut(s) 200
MlyI GAGTC 4 cut(s) 119, 275, 974, 1177
Mph1103I ATGCAT 1 cut(s) 1359
MseI TTAA 5 cut(s) 53, 131, 276, 572, 1025
MslI CAYNNNNRTG 2 cut(s) 971, 1132
MspA1I CMGCKG 3 cut(s) 240, 430, 1513
MspI CCGG 3 cut(s) 33, 143, 1141
MspR9I CCNGG 2 cut(s) 144, 411
Mva1269I GAATGC 2 cut(s) 558, 851
MvaI CCWGG 1 cut(s) 411
MvnI CGCG 1 cut(s) 240
MwoI GCNNNNNNNGC 4 cut(s) 485, 494, 1259, 1401
NarI GGCGCC 1 cut(s) 200
NciI CCSGG 1 cut(s) 144
NdeI CATATG 1 cut(s) 1294
NdeII GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
NlaIII CATG 4 cut(s) 398, 866, 956, 1361
NlaIV GGNNCC 3 cut(s) 201, 887, 1139
NmuCI GTSAC 2 cut(s) 1179, 1266
NotI GCGGCCGC 1 cut(s) 241
NsiI ATGCAT 1 cut(s) 1359
NspI RCATGY 3 cut(s) 866, 956, 1361
OliI CACNNNNGTG 1 cut(s) 1132
PaeI GCATGC 2 cut(s) 956, 1361
PaqCI CACCTGC 1 cut(s) 1313
PctI GAATGC 2 cut(s) 558, 851
PfeI GAWTC 1 cut(s) 626
PflMI CCANNNNNTGG 1 cut(s) 479
PfoI TCCNGGA 1 cut(s) 142
PinAI ACCGGT 1 cut(s) 1140
PkrI GCNGC 9 cut(s) 242, 245, 292, 295, 661, 760, 1000, 1252, 1321
PleI GAGTC 4 cut(s) 119, 274, 974, 1176
PluTI GGCGCC 1 cut(s) 203
PpsI GAGTC 4 cut(s) 119, 274, 974, 1176
PpuMI RGGWCCY 1 cut(s) 407
PshBI ATTAAT 1 cut(s) 1025
Psp124BI GAGCTC 1 cut(s) 1453
Psp5II RGGWCCY 1 cut(s) 407
Psp6I CCWGG 1 cut(s) 409
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 3 cut(s) 201, 887, 1139
PspPI GGNCC 3 cut(s) 407, 425, 988
PspPPI RGGWCCY 1 cut(s) 407
PsrI GAACNNNNNNTAC 2 cut(s) 526, 558
PstI CTGCAG 1 cut(s) 1468
PsuI RGATCY 1 cut(s) 1468
PvuII CAGCTG 1 cut(s) 1513
RsaI GTAC 7 cut(s) 224, 447, 544, 908, 1031, 1109, 1139
RsaNI GTAC 7 cut(s) 223, 446, 543, 907, 1030, 1108, 1138
RseI CAYNNNNRTG 2 cut(s) 971, 1132
SacI GAGCTC 1 cut(s) 1453
SacII CCGCGG 1 cut(s) 241
SaqAI TTAA 5 cut(s) 53, 131, 276, 572, 1025
SatI GCNGC 9 cut(s) 241, 244, 291, 294, 660, 759, 999, 1251, 1320
Sau3AI GATC 7 cut(s) 304, 538, 898, 1327, 1468, 1475, 1490
Sau96I GGNCC 3 cut(s) 407, 425, 988
ScaI AGTACT 1 cut(s) 224
SchI GAGTC 4 cut(s) 119, 275, 974, 1177
ScrFI CCNGG 2 cut(s) 144, 411
SduI GDGCHC 2 cut(s) 1284, 1453
SfaNI GCATC 2 cut(s) 849, 1344
SfcI CTRYAG 2 cut(s) 492, 1464
SfoI GGCGCC 1 cut(s) 201
Sfr303I CCGCGG 1 cut(s) 241
SgrBI CCGCGG 1 cut(s) 241
SinI GGWCC 3 cut(s) 407, 425, 988
SmiMI CAYNNNNRTG 2 cut(s) 971, 1132
SphI GCATGC 2 cut(s) 956, 1361
Sse9I AATT 5 cut(s) 90, 204, 372, 747, 915
SsiI CCGC 6 cut(s) 238, 240, 244, 428, 449, 718
SspDI GGCGCC 1 cut(s) 199
SspI AATATT 1 cut(s) 57
SspMI CTAG 2 cut(s) 323, 663
SstI GAGCTC 1 cut(s) 1453
StyD4I CCNGG 2 cut(s) 142, 409
StyI CCWWGG 1 cut(s) 984
TaaI ACNGT 6 cut(s) 445, 493, 829, 973, 1043, 1112
TaiI ACGT 1 cut(s) 1436
TaqI TCGA 2 cut(s) 1227, 1375
TasI AATT 5 cut(s) 90, 204, 372, 747, 915
TatI WGTACW 2 cut(s) 222, 1029
TauI GCSGC 2 cut(s) 243, 246
TfiI GAWTC 1 cut(s) 626
Tru1I TTAA 5 cut(s) 53, 131, 276, 572, 1025
Tru9I TTAA 5 cut(s) 53, 131, 276, 572, 1025
TscAI CASTG 1 cut(s) 1137
TseFI GTSAC 2 cut(s) 1179, 1266
TseI GCWGC 7 cut(s) 290, 293, 659, 758, 998, 1250, 1319
Tsp45I GTSAC 2 cut(s) 1179, 1266
TspDTI ATGAA 2 cut(s) 703, 952
TspGWI ACGGA 3 cut(s) 980, 1428, 1444
TspRI CASTG 1 cut(s) 1137
Van91I CCANNNNNTGG 1 cut(s) 479
VneI GTGCAC 1 cut(s) 1280
VpaK11BI GGWCC 3 cut(s) 407, 425, 988
VspI ATTAAT 1 cut(s) 1025
XceI RCATGY 3 cut(s) 866, 956, 1361
XcmI CCANNNNNNNNNTGG 2 cut(s) 572, 1131
XspI CTAG 2 cut(s) 323, 663
ZrmI AGTACT 1 cut(s) 224
Zsp2I ATGCAT 1 cut(s) 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.