Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001511

Physical Location & Seq

Genomic Coordinates Reverse (-)

21885153 .. 21891913

Gene Structure 6761 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g29920.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGAGAAATATGCCTTCATGGTGGGGGAAGTCGTCGTCCAAAGAAGCAAAAAAGAAGTCAGGGGGAAAGGAAAGTTTCATTGATTCATTGCATCGGAAATTCAAATTTTCATCTGAAAGTAGAGTGAATAGTAGATCTGGAGGGTCTCGAAGACCATGTAGTGATGCCCTTTCAGAAAAGGGGTCTCGATCTCCTCTAGAATCAAGATCTCCTTCACCCTCCAAACAAGTTGCAAGAACTCAAAGTTTTGCAGAAAGGAGTATTGCTCAACCACTTCCACTTCCTGGTCAACATCCTGCTCATGTGGGACGTACAGATTCTGGGCTTAGTATATCACCAAAGCCAAGATCACAGAAAAGCTCTAAGCCATCATTGTTTCTACCTCTCCCGAGACCTCGGTGCATTGGTGGGAGGCCAAATTGTACCGAGTTTGATGGAGATATGAATACTGGTTCAGTTTCCAGTGAAACCTCTGTTGATAGTGAATATCCAGTTGACTCAGGTCACCGTAGTCCTCAGGCAATTGACTATGAAACTGGAACTAGAACTGCAGTGGGCAGTCCTTCCAGTTCAACGTTCAAGGATCAAACCTTCAGTGTTGCCCCAGTAATCTCAAGAGAGGCAAAAAAACCATCCAACATATCATTCAGCAATCAAGTTTCCCCGACATCGCCAAAACGAAGACCCTTGAGCAGTCATGTGCCAAATCTCCAGGTTCCTTTTCAAGGAGCTTTCTGGAGTGCTCCTGACAGCTCCATGTCGAGTCCTTCTAGAAGTCCAATGAGAGCATTTGGAACTGAGCAAGCCGTGAACTCTGCTTTCTGGGCTGCAAAAACGTATACAGATGTCACCATTGCAGGATCTGGCCACGGCTCCAGTCCAGGTTCTGGTCACAATTCTGGACATAATTCAATGGGAGGGGATATGTCGGGACAGTTGTTTTGGCAGCAAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACAAGCCCTGGCCCAGGCTCAAGAATTCATAGTGGTGCTGTTACACCTATTCATCCTAGAGCAGGTGGGGCTCTCAATGATTCGCAGACAGGCTGGCCTGATGATGGGAAACAACAAAGTCACCGTTTGCCTCTTCCTCCAGTAACGATTTCAAATGCATCACCCTTTTCTCATTCGAATTCAGCAGCAACATCTCCTTCTGTGCCACGAAGTCCTGGACGGGCAGAAACTCCAGCGAGCCCTGGTTCTCGGTGGAAAAAGGGAAAGCTGCTGGGTAGAGGCACATTTGGACATGTTTATGTCGGTTTTAATAGTGAAAGCGGCGAAATGTGTGCAATGAAGGAAGTCACATTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCAAAGCAATTGATGCAGGAAATCACTTTATTGAGCCGTTTACGGCATCCAAACATAGTGCAGTATTATGGGTCTGAATCAGTTGGTGACAAGCTGTATATATATTTGGAGTATGTATCTGGTGGTTCTATATATAAACTTCTCCAAGACTATGGGCAATTCGGTGAACTTGCAATTCGTAGTTATACTCAACAAATCTTGTCAGGGCTCGCATATTTGCATAATAAAAATACCGTCCACAGGGATATTAAAGGAGCAAACATACTTGTAGACCCAAATGGCCGTGTCAAGTTGGCAGATTTTGGGATGGCAAAGCATATTACTGGGCAGTCATGCCCTTTATCATTTAAGGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAACTCAAGTGGTGCCAACCTTGCTGTGGATATATGGAGTCTTGGGTGCACTGTTTTGGAAATGGCTACGACAAAACCACCTTGGAGCCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGAAATAGCAAGGAACTGCCAGCAATTCCAGATCACCTCTTGGACGATGGAAAAGATTTCATAAGGCAATGCTTACAGCGAAATCCACTTCATCGTCCTACTGCTGCCCAGCTCTTGGAGCATCCTTTTGTAAAATATGCAGCACCTTTGGCAAGACTTATAGTGGGCCCCGAGCCTTCTGATTCACCCGCTGGGGTTGCAAATGGAGTGAAATCTCTGGGCATTGGGCAAGCAAGAAATTTCTCCAATTTGGATTCAGATAGGCTTGCAATTCACTCGTCTAGAGTTTCAAAAACTCATCACCATACCAGTGAGATCCATATTCCAAGGAACATATCATGCCCCGTGTCACCCATTGGAAGCCCTCTATTGTACTCCAGGTCACCACCTCACTTAAATGGAAGAATGTCACCGTCTCCTATATCTAGCCCGCGGACCACTTCGGGCTCATCCACGCCTCTCACTGGTGGCAATGGTGCCATTCCATTTATTCACCTTAAACAGTCTATAAATTTTCAAGAGGGTTTCGGAGGCATTTCAAATTCCTCAAATGGTCTCTATGGTAATGGCCCCTCCTATCACGATTCATCTCCTGACATGTTTCGAGGGAAGCAACCAGGGTCTCCCATCTTCTCAGAACTGGTGCCTTCTGAAAATGATGTTCTGGCAAAACAGTTTGGAAGGCCTGCACATACAGAGCAGTACAATGGACAGTCAGTTTTGGCTGATCGGGTGTCTCGCCAACTCCTTAAGGATCATGTTAAGATGAACAGACTGGATTTAAGTCCCAAGTCTCCTTTGACTAGCCGGACAAATGGTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

904

Amino Acids

97.23

Weight (kDa)

9.71

Isoelectric Point (pI)

65.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	418 - 673	4.7e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	419 - 669	5.1e-47	Protein tyrosine and serine/threonine kinase
ABC1	PF03109	451 - 568	5.7e-06	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63700 AT1G63700
fragaria_vesca	FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920
malus_domestica	MD01G1205500.v1.1 MD06G1085900.v1.1 MD07G1274900.v1.1
prunus_persica	Prupe.2G298100_v2.0.a1 Prupe.2G298100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1
pyrus_communis	pycom01g21500 pycom06g08220 pycom07g25100
rosa_chinensis	RchiOBHm_Chr1g0377881 RchiOBHm_Chr7g0197281
rosa_laevigata	RLG00000003944 RLG00000026489
rosa_multiflora	Rmu_co8459889.1_g000001 Rmu_sc0004491.1_g000001 Rmu_sc0004824.1_g000011 Rmu_sc0010019.1_g000003 Rmu_sc0017623.1_g000004 Rmu_sc0030897.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258510 Rroxscaffold_4G00280980
rosa_rugosa	Rorug01G0405400 Rorug07G0039200
rosa_samantha	Rh1AG426400 Rh1BG382900 Rh1CG396700 Rh1DG413900 Rh7AG164200 Rh7BG166000 Rh7CG172700 Rh7DG165400
rosa_wichuraiana	Rw1G037210 Rw7G014320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1763
AarI	CACCTGC	1 cut(s)	1049
Acc36I	ACCTGC	1 cut(s)	1049
AccB1I	GGYRCC	4 cut(s)	1750, 1778, 2363, 2530
AccB7I	CCANNNNNTGG	3 cut(s)	284, 887, 2002
AccI	GTMKAC	2 cut(s)	839, 1650
AccII	CGCG	1 cut(s)	2320
AciI	CCGC	4 cut(s)	1317, 2076, 2318, 2320
AclI	AACGTT	1 cut(s)	575
AclWI	GGATC	4 cut(s)	591, 868, 2197, 2649
AcoI	YGGCCR	2 cut(s)	865, 1660
AcsI	RAATTY	7 cut(s)	98, 104, 1020, 1174, 2125, 2398, 2428
AcuI	CTGAAG	1 cut(s)	577
AfaI	GTAC	5 cut(s)	313, 424, 981, 2261, 2591
AflII	CTTAAG	1 cut(s)	2636
AflIII	ACRYGT	2 cut(s)	1288, 2484
AgsI	TTSAA	9 cut(s)	103, 573, 580, 725, 912, 1149, 2178, 2405, 2427
AjnI	CCWGG	9 cut(s)	283, 711, 880, 1003, 1009, 1210, 1237, 2264, 2503
AjuI	GAANNNNNNNTTGG	2 cut(s)	629, 661
AluBI	AGCT	6 cut(s)	360, 731, 753, 1264, 1474, 1999
AluI	AGCT	6 cut(s)	360, 731, 753, 1264, 1474, 1999
Alw21I	GWGCWC	2 cut(s)	745, 1817
Alw26I	GTCTC	8 cut(s)	150, 189, 385, 2307, 2447, 2514, 2628, 2685
Alw44I	GTGCAC	1 cut(s)	1813
AlwI	GGATC	4 cut(s)	591, 868, 2197, 2649
AlwNI	CAGNNNCTG	3 cut(s)	320, 863, 887
Ama87I	CYCGRG	2 cut(s)	388, 2057
AoxI	GGCC	8 cut(s)	413, 865, 1006, 1091, 1660, 2053, 2455, 2570
ApaI	GGGCCC	1 cut(s)	2057
ApaLI	GTGCAC	1 cut(s)	1813
ApeKI	GCWGC	7 cut(s)	827, 946, 1181, 1264, 1871, 1991, 2027
ApoI	RAATTY	7 cut(s)	98, 104, 1020, 1174, 2125, 2398, 2428
ArsI	GACNNNNNNTTYG	4 cut(s)	41, 73, 924, 956
AspS9I	GGNCC	5 cut(s)	1007, 2053, 2054, 2322, 2456
AsuII	TTCGAA	1 cut(s)	1172
AvaI	CYCGRG	2 cut(s)	388, 2057
AvaII	GGWCC	1 cut(s)	2322
AxyI	CCTNAGG	2 cut(s)	516, 1755
BaeGI	GKGCMC	2 cut(s)	1817, 2057
BalI	TGGCCA	1 cut(s)	867
BanI	GGYRCC	4 cut(s)	1750, 1778, 2363, 2530
BanII	GRGCYC	5 cut(s)	1069, 1238, 1590, 2057, 2336
BbsI	GAAGAC	2 cut(s)	157, 688
Bbv12I	GWGCWC	2 cut(s)	745, 1817
BbvI	GCAGC	7 cut(s)	814, 958, 1193, 1251, 1858, 1978, 2039
BccI	CCATC	8 cut(s)	376, 428, 640, 1094, 1681, 1741, 1928, 2522
BceAI	ACGGC	5 cut(s)	791, 886, 1401, 1439, 1647
BcgI	CGANNNNNNTGC	4 cut(s)	1310, 1344, 2145, 2179
BciT130I	CCWGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
BcoDI	GTCTC	8 cut(s)	150, 189, 385, 2307, 2447, 2514, 2628, 2685
BfaI	CTAG	8 cut(s)	197, 543, 771, 984, 1053, 2169, 2313, 2691
BfmI	CTRYAG	1 cut(s)	549
BfrI	CTTAAG	1 cut(s)	2636
BfuAI	ACCTGC	1 cut(s)	1049
BglII	AGATCT	2 cut(s)	134, 206
BisI	GCNGC	8 cut(s)	828, 947, 1182, 1265, 1318, 1872, 1992, 2028
BlsI	GCNGC	8 cut(s)	829, 948, 1183, 1266, 1319, 1873, 1993, 2029
Bme1390I	CCNGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
Bme18I	GGWCC	1 cut(s)	2322
BmeT110I	CYCGRG	2 cut(s)	388, 2057
BmgT120I	GGNCC	5 cut(s)	1007, 2053, 2054, 2322, 2456
BmrFI	CCNGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
BmrI	ACTGGG	2 cut(s)	599, 1713
BmsI	GCATC	7 cut(s)	100, 154, 1163, 1351, 1383, 1435, 2017
BmuI	ACTGGG	2 cut(s)	599, 1713
BoxI	GACNNNNGTC	1 cut(s)	501
BpiI	GAAGAC	2 cut(s)	157, 688
BplI	GAGNNNNNCTC	2 cut(s)	250, 282
BpmI	CTGGAG	8 cut(s)	159, 695, 757, 859, 960, 1119, 1212, 2248
Bpu14I	TTCGAA	1 cut(s)	1172
BpuEI	CTTGAG	4 cut(s)	598, 709, 1000, 1756
BsaI	GGTCTC	5 cut(s)	150, 189, 385, 2447, 2514
BsaJI	CCNNGG	9 cut(s)	395, 868, 1003, 1009, 1237, 1847, 2213, 2318, 2504
Bse21I	CCTNAGG	2 cut(s)	516, 1755
Bse3DI	GCAATG	5 cut(s)	86, 852, 1338, 1961, 2365
BseBI	CCWGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
BseDI	CCNNGG	9 cut(s)	395, 868, 1003, 1009, 1237, 1847, 2213, 2318, 2504
BseGI	GGATG	8 cut(s)	292, 632, 1048, 1426, 1692, 1752, 2008, 2336
BseMI	GCAATG	5 cut(s)	86, 852, 1338, 1961, 2365
BseMII	CTCAG	6 cut(s)	513, 530, 789, 957, 1746, 2535
BseRI	GAGGAG	1 cut(s)	183
BseSI	GKGCMC	2 cut(s)	1817, 2057
BseXI	GCAGC	7 cut(s)	814, 958, 1193, 1251, 1858, 1978, 2039
BseYI	CCCAGC	3 cut(s)	1267, 1995, 2078
BsgI	GTGCAG	2 cut(s)	1460, 2559
Bsh1236I	CGCG	1 cut(s)	2320
BshFI	GGCC	8 cut(s)	415, 867, 1008, 1093, 1662, 2055, 2457, 2572
BshNI	GGYRCC	4 cut(s)	1750, 1778, 2363, 2530
BsiHKAI	GWGCWC	2 cut(s)	745, 1817
BsiHKCI	CYCGRG	2 cut(s)	388, 2057
BsiSI	CCGG	1 cut(s)	2695
BslFI	GGGAC	4 cut(s)	321, 945, 972, 2658
BsmAI	GTCTC	8 cut(s)	150, 189, 385, 2307, 2447, 2514, 2628, 2685
BsmBI	CGTCTC	1 cut(s)	2307
BsmFI	GGGAC	4 cut(s)	321, 945, 972, 2658
BsnI	GGCC	8 cut(s)	415, 867, 1008, 1093, 1662, 2055, 2457, 2572
Bso31I	GGTCTC	5 cut(s)	150, 189, 385, 2447, 2514
BsoBI	CYCGRG	2 cut(s)	388, 2057
Bsp119I	TTCGAA	1 cut(s)	1172
Bsp120I	GGGCCC	1 cut(s)	2053
Bsp1286I	GDGCHC	7 cut(s)	745, 1069, 1238, 1590, 1817, 2057, 2336
BspACI	CCGC	4 cut(s)	1317, 2076, 2318, 2320
BspANI	GGCC	8 cut(s)	415, 867, 1008, 1093, 1662, 2055, 2457, 2572
BspCNI	CTCAG	6 cut(s)	512, 529, 790, 958, 1747, 2534
BspFNI	CGCG	1 cut(s)	2320
BspMAI	CTGCAG	1 cut(s)	553
BspMI	ACCTGC	1 cut(s)	1049
BspPI	GGATC	4 cut(s)	591, 868, 2197, 2649
BspT104I	TTCGAA	1 cut(s)	1172
BspT107I	GGYRCC	4 cut(s)	1750, 1778, 2363, 2530
BspTI	CTTAAG	1 cut(s)	2636
BspTNI	GGTCTC	5 cut(s)	150, 189, 385, 2447, 2514
BsrDI	GCAATG	5 cut(s)	86, 852, 1338, 1961, 2365
BssECI	CCNNGG	9 cut(s)	395, 868, 1003, 1009, 1237, 1847, 2213, 2318, 2504
BssNAI	GTATAC	1 cut(s)	840
BssT1I	CCWWGG	2 cut(s)	1847, 2213
Bst1107I	GTATAC	1 cut(s)	840
Bst2UI	CCWGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
Bst4CI	ACNGT	9 cut(s)	509, 936, 1121, 1615, 1819, 2301, 2391, 2562, 2601
Bst6I	CTCTTC	1 cut(s)	1134
BstAFI	CTTAAG	1 cut(s)	2636
BstAPI	GCANNNNNTGC	1 cut(s)	1393
BstBI	TTCGAA	1 cut(s)	1172
BstC8I	GCNNGC	9 cut(s)	804, 1091, 1234, 1590, 1908, 2118, 2154, 2318, 2574
BstDEI	CTNAG	9 cut(s)	326, 363, 499, 516, 798, 966, 1371, 1755, 2521
BstDSI	CCRYGG	2 cut(s)	868, 2318
BstEII	GGTNACC	2 cut(s)	503, 2268
BstENI	CCTNNNNNAGG	3 cut(s)	723, 1008, 1056
BstF5I	GGATG	8 cut(s)	292, 632, 1048, 1426, 1692, 1752, 2008, 2336
BstFNI	CGCG	1 cut(s)	2320
BstMAI	GTCTC	8 cut(s)	150, 189, 385, 2307, 2447, 2514, 2628, 2685
BstMWI	GCNNNNNNNGC	8 cut(s)	824, 960, 1064, 1393, 1787, 2005, 2036, 2084
BstNI	CCWGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
BstNSI	RCATGY	2 cut(s)	1292, 2488
BstPAI	GACNNNNGTC	1 cut(s)	501
BstPI	GGTNACC	2 cut(s)	503, 2268
BstSCI	CCNGG	9 cut(s)	283, 711, 880, 1003, 1009, 1210, 1237, 2264, 2503
BstSFI	CTRYAG	1 cut(s)	549
BstSLI	GKGCMC	2 cut(s)	1817, 2057
BstUI	CGCG	1 cut(s)	2320
BstV1I	GCAGC	7 cut(s)	814, 958, 1193, 1251, 1858, 1978, 2039
BstV2I	GAAGAC	2 cut(s)	157, 688
BstX2I	RGATCY	4 cut(s)	134, 206, 860, 2202
BstXI	CCANNNNNNTGG	1 cut(s)	1532
BstYI	RGATCY	4 cut(s)	134, 206, 860, 2202
BstZ17I	GTATAC	1 cut(s)	840
Bsu36I	CCTNAGG	2 cut(s)	516, 1755
BsuRI	GGCC	8 cut(s)	415, 867, 1008, 1093, 1662, 2055, 2457, 2572
BtgI	CCRYGG	2 cut(s)	868, 2318
BtgZI	GCGATG	1 cut(s)	654
BtsCI	GGATG	8 cut(s)	292, 632, 1048, 1426, 1692, 1752, 2008, 2336
BtsI	GCAGTG	1 cut(s)	558
BtsIMutI	CAGTG	6 cut(s)	469, 558, 601, 1815, 2203, 2349
BveI	ACCTGC	1 cut(s)	1049
Cac8I	GCNNGC	9 cut(s)	804, 1091, 1234, 1590, 1908, 2118, 2154, 2318, 2574
CaiI	CAGNNNCTG	3 cut(s)	320, 863, 887
Cfr13I	GGNCC	5 cut(s)	1007, 2053, 2054, 2322, 2456
Cfr42I	CCGCGG	1 cut(s)	2321
Csp6I	GTAC	5 cut(s)	312, 423, 980, 2260, 2590
CviQI	GTAC	5 cut(s)	312, 423, 980, 2260, 2590
DdeI	CTNAG	9 cut(s)	326, 363, 499, 516, 798, 966, 1371, 1755, 2521
EaeI	YGGCCR	2 cut(s)	865, 1660
Eam1104I	CTCTTC	1 cut(s)	1134
EarI	CTCTTC	1 cut(s)	1134
Eco130I	CCWWGG	2 cut(s)	1847, 2213
Eco147I	AGGCCT	1 cut(s)	2572
Eco24I	GRGCYC	5 cut(s)	1069, 1238, 1590, 2057, 2336
Eco31I	GGTCTC	5 cut(s)	150, 189, 385, 2447, 2514
Eco47I	GGWCC	1 cut(s)	2322
Eco57I	CTGAAG	1 cut(s)	577
Eco81I	CCTNAGG	2 cut(s)	516, 1755
Eco88I	CYCGRG	2 cut(s)	388, 2057
Eco91I	GGTNACC	2 cut(s)	503, 2268
EcoNI	CCTNNNNNAGG	3 cut(s)	723, 1008, 1056
EcoO109I	RGGNCCY	1 cut(s)	2054
EcoO65I	GGTNACC	2 cut(s)	503, 2268
EcoRI	GAATTC	2 cut(s)	1020, 1174
EcoRII	CCWGG	9 cut(s)	283, 711, 880, 1003, 1009, 1210, 1237, 2264, 2503
EcoT14I	CCWWGG	2 cut(s)	1847, 2213
EcoT22I	ATGCAT	1 cut(s)	1156
EcoT38I	GRGCYC	5 cut(s)	1069, 1238, 1590, 2057, 2336
ErhI	CCWWGG	2 cut(s)	1847, 2213
Esp3I	CGTCTC	1 cut(s)	2307
FalI	AAGNNNNNCTT	2 cut(s)	196, 228
FaqI	GGGAC	4 cut(s)	321, 945, 972, 2658
FauI	CCCGC	2 cut(s)	2083, 2325
FblI	GTMKAC	2 cut(s)	839, 1650
Fnu4HI	GCNGC	8 cut(s)	828, 947, 1182, 1265, 1318, 1872, 1992, 2028
FokI	GGATG	8 cut(s)	279, 619, 1035, 1413, 1699, 1759, 1995, 2323
FriOI	GRGCYC	5 cut(s)	1069, 1238, 1590, 2057, 2336
Fsp4HI	GCNGC	8 cut(s)	828, 947, 1182, 1265, 1318, 1872, 1992, 2028
FspBI	CTAG	8 cut(s)	197, 543, 771, 984, 1053, 2169, 2313, 2691
GluI	GCNGC	8 cut(s)	828, 947, 1182, 1265, 1318, 1872, 1992, 2028
GsaI	CCCAGC	3 cut(s)	1271, 1999, 2082
GsuI	CTGGAG	8 cut(s)	159, 695, 757, 859, 960, 1119, 1212, 2248
HaeIII	GGCC	8 cut(s)	415, 867, 1008, 1093, 1662, 2055, 2457, 2572
HapII	CCGG	1 cut(s)	2695
HincII	GTYRAC	2 cut(s)	290, 496
HindII	GTYRAC	2 cut(s)	290, 496
HpaII	CCGG	1 cut(s)	2695
Hpy166II	GTNNAC	9 cut(s)	290, 496, 811, 840, 1421, 1547, 1618, 1651, 1815
Hpy8I	GTNNAC	9 cut(s)	290, 496, 811, 840, 1421, 1547, 1618, 1651, 1815
Hpy99I	CGWCG	1 cut(s)	37
HpyCH4III	ACNGT	9 cut(s)	509, 936, 1121, 1615, 1819, 2301, 2391, 2562, 2601
HpyCH4IV	ACGT	3 cut(s)	310, 575, 836
HpyF10VI	GCNNNNNNNGC	8 cut(s)	824, 960, 1064, 1393, 1787, 2005, 2036, 2084
HpyF3I	CTNAG	9 cut(s)	326, 363, 499, 516, 798, 966, 1371, 1755, 2521
HpySE526I	ACGT	3 cut(s)	310, 575, 836
KspI	CCGCGG	1 cut(s)	2321
LmnI	GCTCC	7 cut(s)	728, 748, 758, 878, 1634, 1851, 2005
Lsp1109I	GCAGC	7 cut(s)	814, 958, 1193, 1251, 1858, 1978, 2039
LweI	GCATC	7 cut(s)	100, 154, 1163, 1351, 1383, 1435, 2017
MaeI	CTAG	8 cut(s)	197, 543, 771, 984, 1053, 2169, 2313, 2691
MaeII	ACGT	3 cut(s)	310, 575, 836
MboII	GAAGA	5 cut(s)	162, 693, 1121, 2301, 2509
MfeI	CAATTG	2 cut(s)	522, 1388
MflI	RGATCY	4 cut(s)	134, 206, 860, 2202
MhlI	GDGCHC	7 cut(s)	745, 1069, 1238, 1590, 1817, 2057, 2336
MlsI	TGGCCA	1 cut(s)	867
MluNI	TGGCCA	1 cut(s)	867
MlyI	GAGTC	3 cut(s)	491, 772, 1813
MmeI	TCCRAC	1 cut(s)	660
Mox20I	TGGCCA	1 cut(s)	867
Mph1103I	ATGCAT	1 cut(s)	1156
MscI	TGGCCA	1 cut(s)	867
MseI	TTAA	9 cut(s)	1305, 1629, 1728, 1881, 2282, 2385, 2637, 2649, 2669
MslI	CAYNNNNRTG	4 cut(s)	1029, 1293, 2196, 2283
Msp20I	TGGCCA	1 cut(s)	867
MspA1I	CMGCKG	2 cut(s)	2078, 2320
MspCI	CTTAAG	1 cut(s)	2636
MspI	CCGG	1 cut(s)	2695
MspR9I	CCNGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
MunI	CAATTG	2 cut(s)	522, 1388
MvaI	CCWGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
MvnI	CGCG	1 cut(s)	2320
MwoI	GCNNNNNNNGC	8 cut(s)	824, 960, 1064, 1393, 1787, 2005, 2036, 2084
NmuCI	GTSAC	9 cut(s)	503, 847, 890, 1115, 1342, 1466, 2235, 2268, 2295
NsiI	ATGCAT	1 cut(s)	1156
NspI	RCATGY	2 cut(s)	1292, 2488
NspV	TTCGAA	1 cut(s)	1172
PaqCI	CACCTGC	1 cut(s)	1049
PceI	AGGCCT	1 cut(s)	2572
PciI	ACATGT	2 cut(s)	1288, 2484
PfeI	GAWTC	8 cut(s)	83, 200, 317, 1076, 1457, 2069, 2141, 2471
PflMI	CCANNNNNTGG	3 cut(s)	284, 887, 2002
PfoI	TCCNGGA	1 cut(s)	1210
PkrI	GCNGC	8 cut(s)	829, 948, 1183, 1266, 1319, 1873, 1993, 2029
PleI	GAGTC	3 cut(s)	491, 771, 1812
PpsI	GAGTC	3 cut(s)	491, 771, 1812
PscI	ACATGT	2 cut(s)	1288, 2484
PshAI	GACNNNNGTC	1 cut(s)	501
PsiI	TTATAA	1 cut(s)	1763
Psp1406I	AACGTT	1 cut(s)	575
Psp6I	CCWGG	9 cut(s)	283, 711, 880, 1003, 1009, 1210, 1237, 2264, 2503
PspEI	GGTNACC	2 cut(s)	503, 2268
PspFI	CCCAGC	3 cut(s)	1267, 1995, 2078
PspGI	CCWGG	9 cut(s)	283, 711, 880, 1003, 1009, 1210, 1237, 2264, 2503
PspOMI	GGGCCC	1 cut(s)	2053
PspPI	GGNCC	5 cut(s)	1007, 2053, 2054, 2322, 2456
PstI	CTGCAG	1 cut(s)	553
PstNI	CAGNNNCTG	3 cut(s)	320, 863, 887
PsuI	RGATCY	4 cut(s)	134, 206, 860, 2202
RsaI	GTAC	5 cut(s)	313, 424, 981, 2261, 2591
RsaNI	GTAC	5 cut(s)	312, 423, 980, 2260, 2590
RseI	CAYNNNNRTG	4 cut(s)	1029, 1293, 2196, 2283
SacII	CCGCGG	1 cut(s)	2321
SaqAI	TTAA	9 cut(s)	1305, 1629, 1728, 1881, 2282, 2385, 2637, 2649, 2669
SatI	GCNGC	8 cut(s)	828, 947, 1182, 1265, 1318, 1872, 1992, 2028
Sau96I	GGNCC	5 cut(s)	1007, 2053, 2054, 2322, 2456
SchI	GAGTC	3 cut(s)	491, 772, 1813
ScrFI	CCNGG	9 cut(s)	285, 713, 882, 1005, 1011, 1212, 1239, 2266, 2505
SduI	GDGCHC	7 cut(s)	745, 1069, 1238, 1590, 1817, 2057, 2336
SfaNI	GCATC	7 cut(s)	100, 154, 1163, 1351, 1383, 1435, 2017
SfcI	CTRYAG	1 cut(s)	549
Sfr303I	CCGCGG	1 cut(s)	2321
SfuI	TTCGAA	1 cut(s)	1172
SgrBI	CCGCGG	1 cut(s)	2321
SinI	GGWCC	1 cut(s)	2322
SmiMI	CAYNNNNRTG	4 cut(s)	1029, 1293, 2196, 2283
SmlI	CTYRAG	5 cut(s)	613, 688, 1015, 1771, 2636
SmoI	CTYRAG	5 cut(s)	613, 688, 1015, 1771, 2636
SseBI	AGGCCT	1 cut(s)	2572
SsiI	CCGC	4 cut(s)	1317, 2076, 2318, 2320
SspMI	CTAG	8 cut(s)	197, 543, 771, 984, 1053, 2169, 2313, 2691
StuI	AGGCCT	1 cut(s)	2572
StyD4I	CCNGG	9 cut(s)	283, 711, 880, 1003, 1009, 1210, 1237, 2264, 2503
StyI	CCWWGG	2 cut(s)	1847, 2213
TaaI	ACNGT	9 cut(s)	509, 936, 1121, 1615, 1819, 2301, 2391, 2562, 2601
TaiI	ACGT	3 cut(s)	313, 578, 839
TaqI	TCGA	5 cut(s)	148, 187, 761, 1172, 2491
TatI	WGTACW	2 cut(s)	2259, 2589
TauI	GCSGC	1 cut(s)	1320
TfiI	GAWTC	8 cut(s)	83, 200, 317, 1076, 1457, 2069, 2141, 2471
Tru1I	TTAA	9 cut(s)	1305, 1629, 1728, 1881, 2282, 2385, 2637, 2649, 2669
Tru9I	TTAA	9 cut(s)	1305, 1629, 1728, 1881, 2282, 2385, 2637, 2649, 2669
TscAI	CASTG	6 cut(s)	469, 558, 601, 1822, 2203, 2356
TseFI	GTSAC	9 cut(s)	503, 847, 890, 1115, 1342, 1466, 2235, 2268, 2295
TseI	GCWGC	7 cut(s)	827, 946, 1181, 1264, 1871, 1991, 2027
Tsp45I	GTSAC	9 cut(s)	503, 847, 890, 1115, 1342, 1466, 2235, 2268, 2295
TspRI	CASTG	6 cut(s)	469, 558, 601, 1822, 2203, 2356
Van91I	CCANNNNNTGG	3 cut(s)	284, 887, 2002
Vha464I	CTTAAG	1 cut(s)	2636
VneI	GTGCAC	1 cut(s)	1813
VpaK11BI	GGWCC	1 cut(s)	2322
XagI	CCTNNNNNAGG	3 cut(s)	723, 1008, 1056
XapI	RAATTY	7 cut(s)	98, 104, 1020, 1174, 2125, 2398, 2428
XbaI	TCTAGA	3 cut(s)	196, 770, 2168
XceI	RCATGY	2 cut(s)	1292, 2488
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1789
XmiI	GTMKAC	2 cut(s)	839, 1650
XspI	CTAG	8 cut(s)	197, 543, 771, 984, 1053, 2169, 2313, 2691
Zsp2I	ATGCAT	1 cut(s)	1156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.