Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001511

Physical Location & Seq

Genomic Coordinates Reverse (-)

13340693 .. 13345397

Gene Structure 4705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g08220.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGGGTTCTCTATCTAGGGTGCTGTCACCAGTACCCTCCTCACAAGTATCACGCTGTCCAAGCTTTGCAGAAAAGCCTCATGCCCAGCCACTACCCCTTCCTAGAGTGCAACTTTCTAACATTGGGCGTACTAACTCTGGCATCAGCGTGGTATCAAAACCAGAATCTGACAGAGAGTCCAACCAATTGTTCTATTTGCCTCTTCCAGGACCCGGATGTGTCTCAAGCAGGGAAGATCATACCTATGCTGAAGGAGATTTAGCTACTGCTTCCATATCCAGTGATAGTTCTATTGATAGTGATGATCCGTCTGACTCACGCCTTCTAAGTCCCATGGGATCCGACTATGAAAATGGAAACAGAACAAATATAAACAGTCCTTCCTGTGTAATACAAAAGGATCCATTCCCTACTGTGTACCAAAAGAACTCCAAAGATACGTTGAAGCCGGGTCATCTTTTGTGCAATAATCAGGTTCTGTCTACATCACCAAAATGGAAACCTTCAAGCACACATATGCAGAATATACAAATCCCTTTCCATGGTACTTTGTCTAGTGCTCCGGACAGCTCAATGTCGAGTCCTTCTAGGAGTCCTATGAGAGTGTTCAGTGTTGAGCAAGTTAGGAACTCTAGCTTCTGGGCAGCAAAGACTTATCCAGATATAGCTTCTACCCACTGCTCTAGTCCAGGTTCAGGTCAAAATTCTGGGCATAATTCAGTCGGAGGGGATATGTCAGGACAGTTGTTTTGGCAGCACATTAGGTGTAGTCCCGAATGTTCTCCAATACCCAGTCCTAGAATGACCAGTCCTGGTCCCAACTCCAGAATACAAAGTGGTGCTGCCACCCCTCTGCATCCTCGATCTGGAGGGCCAGCCGCAGAGTCGCCTACAAGCCGGCCTGATGATGCGAAGCAGAAAAGCCACCGGTTGCCCCTTCCTCCAATAATAATAACTAAGACCTGTCCTTTTTCTCCTTCATATTCAGCTACAACAACTCCCACAGTTCCACGTAGCCCTAATAGGGTAGAACATCTAACAAGCCCTGGCTCACAATGGAAGAAGGGGCGCCTGCTTGGAAGGGGCACATTTGGGCATGTATATCTTGGTTTTAACAGTGAAAGCGGTGAGATGTGTGCAATGAAGGAGGTAACTCTATTTGCAGATGATGCAAAATCAAAGGAAAGTGCACAGCAGCTGGGCCAAGAAATTGCTTTGCTAAGTCGCTTGCGACATCCAAATATAGTGCAGTATTATGGATCTGAGACGGTAGATGACAAGCTTTACATATACTTGGAGTATGTGTCTGGTGGGTCCATCTATAAACTACTTCAAGAGTATGGTCAGTTTGGTGAAGTAGCCACTCGTAGTTATACTCAACAAATCTTGTCAGGGCTTGCATACTTACATACCAAAAACACTGTCCACCGGGATATCAAAGGAGCAAATATATTAGTAGATCCAAATGGTCGGGTGAAATTAGCAGATTTTGGGATGGCTAAGCATATAACGGGACAGTCTTGTCCATTATCGTTCAATGGAAGCCCATATTGGATGGCGCCTGAGGTTATCAAGAATTCAAACGGTTGTAATCTTGCGGTTGATATATGGAGCCTTGGCTGCACTGTTCTTGAGATGGCCACAACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCTGCCATGTTTAAGATTGGAAACAGCAGGGAACTTCCTGAAATTCCTGATCATCTGTCAGAGGATGGGAAGAGCTTTATTAGGCTGTGTTTGCAACGTAACCCACTGCATCGTCCTACAGCTGCTCAGCTTTTGGAGCATCCTTTTGTTAGGAATGTTGCTCCACTGGAAAGAACCATCTCTAGTGCAAAGCATTCTAAAGGACCAGCTGCAATGAGATCTCAGGCATTTGGACATGGGAAAAATCATTTGAACTTAGACTCAGAAGGGATGGGCATGCATCAGTCCAGAGGCTCAAAAACTGTTTCCGCATCAAGTGATGCTTATTCACCGAAAAATGTATCATGCCCAATTTCTCCCATTGGAAGTCCGCTTCTACATTCTAGATCACCACAACATGTCAGTGGAAGGATGTCCCCCTCTCCCATATCTAGCCCTCATACCACATCCGGTTCATCTACGCCTCTCACCAGCAGTTCAATCCCTTTTCAACACTTGAAGCAGCCAACAACCTACTCACTTGCAGGCATAGGGATGACCCAGAGATCTCAAAACTATGGTTTCCATACAAATGGCAACATGCCATATCATGAGCCAAAGCCAGACCTATCTCAAGGATTTCCACAAGGCTCTTATGTTTTCCAGGATATTTTTTTTCCTGATAATGGTGTACTCGGAAACCAGGTCGGGCATTCAGTTCCTGGGGACCTATTTGATGTGCAGTCTGTTTTGGCTGATCGTGTGTCTCAGCAGCTCTTAAGGGATCATATTAAGTTGAACATCCATGGACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0001932 GO:0001934 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009893 GO:0009987 GO:0010016 GO:0010098 GO:0010103 GO:0010229 GO:0010374 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090698 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

824

Amino Acids

89.29

Weight (kDa)

8.81

Isoelectric Point (pI)

57.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63700 AT1G63700
fragaria_vesca	FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920
malus_domestica	MD01G1205500.v1.1 MD06G1085900.v1.1 MD07G1274900.v1.1
prunus_persica	Prupe.2G298100_v2.0.a1 Prupe.2G298100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1
pyrus_communis	pycom01g21500 pycom06g08220 pycom07g25100
rosa_chinensis	RchiOBHm_Chr1g0377881 RchiOBHm_Chr7g0197281
rosa_laevigata	RLG00000003944 RLG00000026489
rosa_multiflora	Rmu_co8459889.1_g000001 Rmu_sc0004491.1_g000001 Rmu_sc0004824.1_g000011 Rmu_sc0010019.1_g000003 Rmu_sc0017623.1_g000004 Rmu_sc0030897.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258510 Rroxscaffold_4G00280980
rosa_rugosa	Rorug01G0405400 Rorug07G0039200
rosa_samantha	Rh1AG426400 Rh1BG382900 Rh1CG396700 Rh1DG413900 Rh7AG164200 Rh7BG166000 Rh7CG172700 Rh7DG165400
rosa_wichuraiana	Rw1G037210 Rw7G014320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1521
AccB1I	GGYRCC	2 cut(s)	1068, 1558
AccI	GTMKAC	1 cut(s)	482
AccIII	TCCGGA	1 cut(s)	562
AciI	CCGC	5 cut(s)	879, 1125, 1598, 1986, 2048
AclWI	GGATC	8 cut(s)	299, 333, 346, 395, 408, 1267, 1454, 2448
AcoI	YGGCCR	1 cut(s)	1638
AcsI	RAATTY	3 cut(s)	703, 1576, 1719
AcuI	CTGAAG	1 cut(s)	270
AcyI	GRCGYC	2 cut(s)	1069, 1559
AfaI	GTAC	5 cut(s)	33, 130, 419, 547, 2349
AfiI	CCNNNNNNNGG	7 cut(s)	206, 212, 542, 695, 866, 1024, 2342
AflII	CTTAAG	1 cut(s)	2434
AflIII	ACRYGT	1 cut(s)	2074
AgeI	ACCGGT	1 cut(s)	927
AhdI	GACNNNNNGTC	1 cut(s)	175
AjnI	CCWGG	7 cut(s)	205, 688, 811, 1045, 2319, 2358, 2377
AjuI	GAANNNNNNNTTGG	4 cut(s)	173, 205, 1534, 1566
Alw21I	GWGCWC	2 cut(s)	562, 1192
Alw26I	GTCTC	3 cut(s)	226, 1259, 2427
Alw44I	GTGCAC	1 cut(s)	1188
AlwI	GGATC	8 cut(s)	299, 333, 346, 395, 408, 1267, 1454, 2448
AlwNI	CAGNNNCTG	4 cut(s)	167, 478, 1198, 2378
Aor13HI	TCCGGA	1 cut(s)	562
AoxI	GGCC	4 cut(s)	872, 899, 1201, 1638
ApaLI	GTGCAC	1 cut(s)	1188
ApoI	RAATTY	3 cut(s)	703, 1576, 1719
ArsI	GACNNNNNNTTYG	4 cut(s)	732, 764, 1407, 1439
AsiGI	ACCGGT	1 cut(s)	927
AspLEI	GCGC	2 cut(s)	1071, 1561
AspS9I	GGNCC	7 cut(s)	209, 815, 872, 1201, 1314, 1880, 2383
AsuC2I	CCSGG	3 cut(s)	213, 450, 1430
AsuHPI	GGTGA	8 cut(s)	18, 480, 1139, 1364, 1486, 1998, 2058, 2137
AvaII	GGWCC	5 cut(s)	209, 815, 1314, 1880, 2383
AxyI	CCTNAGG	1 cut(s)	1563
BaeGI	GKGCMC	2 cut(s)	1088, 1192
BalI	TGGCCA	1 cut(s)	1640
BamHI	GGATCC	2 cut(s)	338, 400
BanI	GGYRCC	2 cut(s)	1068, 1558
Bbv12I	GWGCWC	2 cut(s)	562, 1192
BccI	CCATC	7 cut(s)	1325, 1489, 1549, 1630, 1736, 1862, 1942
BciT130I	CCWGG	7 cut(s)	207, 690, 813, 1047, 2321, 2360, 2379
BclI	TGATCA	1 cut(s)	1726
BcnI	CCSGG	3 cut(s)	213, 450, 1430
BcoDI	GTCTC	3 cut(s)	226, 1259, 2427
BfmI	CTRYAG	2 cut(s)	1794, 2468
BfoI	RGCGCY	2 cut(s)	1072, 1562
BfrI	CTTAAG	1 cut(s)	2434
BglII	AGATCT	2 cut(s)	1895, 2222
BlpI	GCTNAGC	2 cut(s)	1500, 1803
Bme18I	GGWCC	5 cut(s)	209, 815, 1314, 1880, 2383
BmeRI	GACNNNNNGTC	1 cut(s)	175
BmgT120I	GGNCC	7 cut(s)	209, 815, 872, 1201, 1314, 1880, 2383
BmrI	ACTGGG	1 cut(s)	786
BmsI	GCATC	9 cut(s)	150, 865, 898, 1159, 1795, 1825, 1966, 1987, 1997
BmuI	ACTGGG	1 cut(s)	786
BpmI	CTGGAG	2 cut(s)	808, 888
Bpu1102I	GCTNAGC	2 cut(s)	1500, 1803
BpuEI	CTTGAG	3 cut(s)	208, 1652, 2274
BpuMI	CCSGG	3 cut(s)	213, 450, 1430
BsaAI	YACGTR	1 cut(s)	1013
BsaHI	GRCGYC	2 cut(s)	1069, 1559
BsaJI	CCNNGG	7 cut(s)	333, 541, 1045, 1615, 1655, 2378, 2461
BsaWI	WCCGGW	3 cut(s)	562, 927, 2126
BsaXI	ACNNNNNCTCC	4 cut(s)	982, 1012, 1289, 1319
Bsc4I	CCNNNNNNNGG	7 cut(s)	206, 212, 542, 695, 866, 1024, 2342
Bse118I	RCCGGY	2 cut(s)	897, 927
Bse1I	ACTGG	5 cut(s)	29, 279, 792, 807, 1848
Bse21I	CCTNAGG	1 cut(s)	1563
Bse3DI	GCAATG	2 cut(s)	1146, 1896
BseAI	TCCGGA	1 cut(s)	562
BseBI	CCWGG	7 cut(s)	207, 690, 813, 1047, 2321, 2360, 2379
BseDI	CCNNGG	7 cut(s)	333, 541, 1045, 1615, 1655, 2378, 2461
BseLI	CCNNNNNNNGG	7 cut(s)	206, 212, 542, 695, 866, 1024, 2342
BseMI	GCAATG	2 cut(s)	1146, 1896
BseMII	CTCAG	6 cut(s)	1254, 1554, 1817, 1913, 1953, 2438
BseNI	ACTGG	5 cut(s)	29, 279, 792, 807, 1848
BseRI	GAGGAG	1 cut(s)	28
BseSI	GKGCMC	2 cut(s)	1088, 1192
BseYI	CCCAGC	2 cut(s)	84, 1198
BsgI	GTGCAG	3 cut(s)	1268, 1606, 2417
BshFI	GGCC	4 cut(s)	874, 901, 1203, 1640
BshNI	GGYRCC	2 cut(s)	1068, 1558
BshTI	ACCGGT	1 cut(s)	927
BsiHKAI	GWGCWC	2 cut(s)	562, 1192
BsiSI	CCGG	7 cut(s)	213, 449, 563, 898, 928, 1429, 2127
BslFI	GGGAC	6 cut(s)	315, 756, 801, 1527, 2077, 2396
BslI	CCNNNNNNNGG	7 cut(s)	206, 212, 542, 695, 866, 1024, 2342
BsmAI	GTCTC	3 cut(s)	226, 1259, 2427
BsmBI	CGTCTC	1 cut(s)	1259
BsmFI	GGGAC	6 cut(s)	315, 756, 801, 1527, 2077, 2396
BsmI	GAATGC	2 cut(s)	1870, 2368
BsnI	GGCC	4 cut(s)	874, 901, 1203, 1640
Bsp1286I	GDGCHC	3 cut(s)	562, 1088, 1192
Bsp13I	TCCGGA	1 cut(s)	562
Bsp1720I	GCTNAGC	2 cut(s)	1500, 1803
Bsp19I	CCATGG	3 cut(s)	333, 541, 2461
BspACI	CCGC	5 cut(s)	879, 1125, 1598, 1986, 2048
BspANI	GGCC	4 cut(s)	874, 901, 1203, 1640
BspCNI	CTCAG	6 cut(s)	1255, 1555, 1816, 1912, 1952, 2437
BspEI	TCCGGA	1 cut(s)	562
BspHI	TCATGA	1 cut(s)	2266
BspPI	GGATC	8 cut(s)	299, 333, 346, 395, 408, 1267, 1454, 2448
BspQI	GCTCTTC	1 cut(s)	1742
BspT107I	GGYRCC	2 cut(s)	1068, 1558
BspTI	CTTAAG	1 cut(s)	2434
BsrDI	GCAATG	2 cut(s)	1146, 1896
BsrFI	RCCGGY	2 cut(s)	897, 927
BsrI	ACTGG	5 cut(s)	29, 279, 792, 807, 1848
BssAI	RCCGGY	2 cut(s)	897, 927
BssECI	CCNNGG	7 cut(s)	333, 541, 1045, 1615, 1655, 2378, 2461
BssNI	GRCGYC	2 cut(s)	1069, 1559
BssT1I	CCWWGG	5 cut(s)	333, 541, 1615, 1655, 2461
Bst2UI	CCWGG	7 cut(s)	207, 690, 813, 1047, 2321, 2360, 2379
Bst6I	CTCTTC	2 cut(s)	207, 1742
BstACI	GRCGYC	2 cut(s)	1069, 1559
BstAFI	CTTAAG	1 cut(s)	2434
BstAPI	GCANNNNNTGC	1 cut(s)	1169
BstBAI	YACGTR	1 cut(s)	1013
BstC8I	GCNNGC	7 cut(s)	876, 899, 1073, 1229, 1398, 1955, 2203
BstDSI	CCRYGG	3 cut(s)	333, 541, 2461
BstENI	CCTNNNNNAGG	1 cut(s)	204
BstH2I	RGCGCY	2 cut(s)	1072, 1562
BstHHI	GCGC	2 cut(s)	1071, 1561
BstMAI	GTCTC	3 cut(s)	226, 1259, 2427
BstMWI	GCNNNNNNNGC	5 cut(s)	60, 1169, 1620, 1768, 1813
BstNI	CCWGG	7 cut(s)	207, 690, 813, 1047, 2321, 2360, 2379
BstNSI	RCATGY	4 cut(s)	1100, 1957, 2078, 2260
BstSFI	CTRYAG	2 cut(s)	1794, 2468
BstSLI	GKGCMC	2 cut(s)	1088, 1192
BstX2I	RGATCY	6 cut(s)	338, 400, 1259, 1459, 1895, 2222
BstXI	CCANNNNNNTGG	1 cut(s)	2249
BstYI	RGATCY	6 cut(s)	338, 400, 1259, 1459, 1895, 2222
Bsu36I	CCTNAGG	1 cut(s)	1563
BsuRI	GGCC	4 cut(s)	874, 901, 1203, 1640
BtgI	CCRYGG	3 cut(s)	333, 541, 2461
BtsI	GCAGTG	2 cut(s)	676, 1781
BtsIMutI	CAGTG	9 cut(s)	286, 616, 676, 1123, 1419, 1623, 1781, 1841, 2086
Cac8I	GCNNGC	7 cut(s)	876, 899, 1073, 1229, 1398, 1955, 2203
CaiI	CAGNNNCTG	4 cut(s)	167, 478, 1198, 2378
CciI	TCATGA	1 cut(s)	2266
CfoI	GCGC	2 cut(s)	1071, 1561
Cfr10I	RCCGGY	2 cut(s)	897, 927
Cfr13I	GGNCC	7 cut(s)	209, 815, 872, 1201, 1314, 1880, 2383
CsiI	ACCWGGT	1 cut(s)	2358
Csp6I	GTAC	5 cut(s)	32, 129, 418, 546, 2348
CspAI	ACCGGT	1 cut(s)	927
CviQI	GTAC	5 cut(s)	32, 129, 418, 546, 2348
DinI	GGCGCC	2 cut(s)	1070, 1560
DrdI	GACNNNNNNGTC	1 cut(s)	1521
DriI	GACNNNNNGTC	1 cut(s)	175
DseDI	GACNNNNNNGTC	1 cut(s)	1521
EaeI	YGGCCR	1 cut(s)	1638
Eam1104I	CTCTTC	2 cut(s)	207, 1742
Eam1105I	GACNNNNNGTC	1 cut(s)	175
EarI	CTCTTC	2 cut(s)	207, 1742
Eco130I	CCWWGG	5 cut(s)	333, 541, 1615, 1655, 2461
Eco32I	GATATC	1 cut(s)	1435
Eco47I	GGWCC	5 cut(s)	209, 815, 1314, 1880, 2383
Eco57I	CTGAAG	1 cut(s)	270
Eco81I	CCTNAGG	1 cut(s)	1563
EcoNI	CCTNNNNNAGG	1 cut(s)	204
EcoO109I	RGGNCCY	2 cut(s)	209, 2383
EcoRI	GAATTC	1 cut(s)	1576
EcoRII	CCWGG	7 cut(s)	205, 688, 811, 1045, 2319, 2358, 2377
EcoRV	GATATC	1 cut(s)	1435
EcoT14I	CCWWGG	5 cut(s)	333, 541, 1615, 1655, 2461
EcoT22I	ATGCAT	1 cut(s)	1959
EgeI	GGCGCC	2 cut(s)	1070, 1560
EheI	GGCGCC	2 cut(s)	1070, 1560
ErhI	CCWWGG	5 cut(s)	333, 541, 1615, 1655, 2461
Esp3I	CGTCTC	1 cut(s)	1259
FalI	AAGNNNNNCTT	2 cut(s)	1984, 2016
FaqI	GGGAC	6 cut(s)	315, 756, 801, 1527, 2077, 2396
FauNDI	CATATG	1 cut(s)	516
FbaI	TGATCA	1 cut(s)	1726
FblI	GTMKAC	1 cut(s)	482
GlaI	GCGC	2 cut(s)	1070, 1560
GsaI	CCCAGC	2 cut(s)	88, 1202
GsuI	CTGGAG	2 cut(s)	808, 888
HaeII	RGCGCY	2 cut(s)	1072, 1562
HaeIII	GGCC	4 cut(s)	874, 901, 1203, 1640
HapII	CCGG	7 cut(s)	213, 449, 563, 898, 928, 1429, 2127
HhaI	GCGC	2 cut(s)	1071, 1561
Hin1I	GRCGYC	2 cut(s)	1069, 1559
Hin6I	GCGC	2 cut(s)	1069, 1559
HinP1I	GCGC	2 cut(s)	1069, 1559
HindIII	AAGCTT	2 cut(s)	61, 1280
HinfI	GANTC	7 cut(s)	164, 176, 314, 580, 592, 884, 1937
HpaII	CCGG	7 cut(s)	213, 449, 563, 898, 928, 1429, 2127
HphI	GGTGA	8 cut(s)	18, 480, 1139, 1364, 1486, 1998, 2058, 2137
Hpy166II	GTNNAC	5 cut(s)	418, 483, 1190, 1426, 2348
Hpy188I	TCNGA	8 cut(s)	169, 313, 343, 725, 1264, 1738, 1942, 2354
Hpy8I	GTNNAC	5 cut(s)	418, 483, 1190, 1426, 2348
HpyCH4IV	ACGT	3 cut(s)	440, 1012, 1774
HpyF10VI	GCNNNNNNNGC	5 cut(s)	60, 1169, 1620, 1768, 1813
HpySE526I	ACGT	3 cut(s)	440, 1012, 1774
Hsp92I	GRCGYC	2 cut(s)	1069, 1559
HspAI	GCGC	2 cut(s)	1069, 1559
KasI	GGCGCC	2 cut(s)	1068, 1558
Kpn2I	TCCGGA	1 cut(s)	562
KroI	GCCGGC	1 cut(s)	897
KroNI	GCCGGC	1 cut(s)	899
Ksp22I	TGATCA	1 cut(s)	1726
LguI	GCTCTTC	1 cut(s)	1742
LmnI	GCTCC	6 cut(s)	565, 1442, 1611, 1659, 1813, 1843
LweI	GCATC	9 cut(s)	150, 865, 898, 1159, 1795, 1825, 1966, 1987, 1997
MabI	ACCWGGT	1 cut(s)	2358
MaeII	ACGT	3 cut(s)	440, 1012, 1774
MaeIII	GTNAC	3 cut(s)	24, 1150, 1775
MboII	GAAGA	4 cut(s)	194, 245, 1072, 1759
MfeI	CAATTG	1 cut(s)	185
MflI	RGATCY	6 cut(s)	338, 400, 1259, 1459, 1895, 2222
MhlI	GDGCHC	3 cut(s)	562, 1088, 1192
MlsI	TGGCCA	1 cut(s)	1640
MluCI	AATT	8 cut(s)	185, 703, 715, 1209, 1478, 1576, 1719, 2028
MluNI	TGGCCA	1 cut(s)	1640
Mly113I	GGCGCC	2 cut(s)	1069, 1559
MlyI	GAGTC	6 cut(s)	185, 308, 589, 601, 893, 1931
MmeI	TCCRAC	3 cut(s)	204, 366, 703
Mox20I	TGGCCA	1 cut(s)	1640
Mph1103I	ATGCAT	1 cut(s)	1959
MroI	TCCGGA	1 cut(s)	562
MroNI	GCCGGC	1 cut(s)	897
MscI	TGGCCA	1 cut(s)	1640
MseI	TTAA	4 cut(s)	1113, 1689, 2435, 2448
MslI	CAYNNNNRTG	7 cut(s)	146, 243, 493, 515, 2079, 2210, 2247
Msp20I	TGGCCA	1 cut(s)	1640
MspA1I	CMGCKG	3 cut(s)	1198, 1799, 1886
MspCI	CTTAAG	1 cut(s)	2434
MspI	CCGG	7 cut(s)	213, 449, 563, 898, 928, 1429, 2127
MunI	CAATTG	1 cut(s)	185
Mva1269I	GAATGC	2 cut(s)	1870, 2368
MvaI	CCWGG	7 cut(s)	207, 690, 813, 1047, 2321, 2360, 2379
MwoI	GCNNNNNNNGC	5 cut(s)	60, 1169, 1620, 1768, 1813
NaeI	GCCGGC	1 cut(s)	899
NarI	GGCGCC	2 cut(s)	1069, 1559
NciI	CCSGG	3 cut(s)	213, 450, 1430
NcoI	CCATGG	3 cut(s)	333, 541, 2461
NdeI	CATATG	1 cut(s)	516
NgoMIV	GCCGGC	1 cut(s)	897
NmuCI	GTSAC	1 cut(s)	24
NsiI	ATGCAT	1 cut(s)	1959
NspI	RCATGY	4 cut(s)	1100, 1957, 2078, 2260
PaeI	GCATGC	1 cut(s)	1957
PagI	TCATGA	1 cut(s)	2266
PciI	ACATGT	1 cut(s)	2074
PciSI	GCTCTTC	1 cut(s)	1742
PctI	GAATGC	2 cut(s)	1870, 2368
PdiI	GCCGGC	1 cut(s)	899
PfeI	GAWTC	1 cut(s)	164
PfoI	TCCNGGA	2 cut(s)	205, 2319
PinAI	ACCGGT	1 cut(s)	927
PleI	GAGTC	6 cut(s)	184, 308, 588, 600, 892, 1931
PluTI	GGCGCC	2 cut(s)	1072, 1562
PpsI	GAGTC	6 cut(s)	184, 308, 588, 600, 892, 1931
Ppu21I	YACGTR	1 cut(s)	1013
PpuMI	RGGWCCY	2 cut(s)	209, 2383
PscI	ACATGT	1 cut(s)	2074
Psp5II	RGGWCCY	2 cut(s)	209, 2383
Psp6I	CCWGG	7 cut(s)	205, 688, 811, 1045, 2319, 2358, 2377
PspFI	CCCAGC	2 cut(s)	84, 1198
PspGI	CCWGG	7 cut(s)	205, 688, 811, 1045, 2319, 2358, 2377
PspPI	GGNCC	7 cut(s)	209, 815, 872, 1201, 1314, 1880, 2383
PspPPI	RGGWCCY	2 cut(s)	209, 2383
PstNI	CAGNNNCTG	4 cut(s)	167, 478, 1198, 2378
PsuI	RGATCY	6 cut(s)	338, 400, 1259, 1459, 1895, 2222
PvuII	CAGCTG	3 cut(s)	1198, 1799, 1886
RsaI	GTAC	5 cut(s)	33, 130, 419, 547, 2349
RsaNI	GTAC	5 cut(s)	32, 129, 418, 546, 2348
RseI	CAYNNNNRTG	7 cut(s)	146, 243, 493, 515, 2079, 2210, 2247
SapI	GCTCTTC	1 cut(s)	1742
SaqAI	TTAA	4 cut(s)	1113, 1689, 2435, 2448
Sau96I	GGNCC	7 cut(s)	209, 815, 872, 1201, 1314, 1880, 2383
SchI	GAGTC	6 cut(s)	185, 308, 589, 601, 893, 1931
SduI	GDGCHC	3 cut(s)	562, 1088, 1192
SexAI	ACCWGGT	1 cut(s)	2358
SfaNI	GCATC	9 cut(s)	150, 865, 898, 1159, 1795, 1825, 1966, 1987, 1997
SfcI	CTRYAG	2 cut(s)	1794, 2468
SfoI	GGCGCC	2 cut(s)	1070, 1560
SinI	GGWCC	5 cut(s)	209, 815, 1314, 1880, 2383
SmiMI	CAYNNNNRTG	7 cut(s)	146, 243, 493, 515, 2079, 2210, 2247
SmlI	CTYRAG	4 cut(s)	223, 1631, 2289, 2434
SmoI	CTYRAG	4 cut(s)	223, 1631, 2289, 2434
SphI	GCATGC	1 cut(s)	1957
Sse9I	AATT	8 cut(s)	185, 703, 715, 1209, 1478, 1576, 1719, 2028
SsiI	CCGC	5 cut(s)	879, 1125, 1598, 1986, 2048
SspDI	GGCGCC	2 cut(s)	1068, 1558
StyI	CCWWGG	5 cut(s)	333, 541, 1615, 1655, 2461
TaiI	ACGT	3 cut(s)	443, 1015, 1777
TaqI	TCGA	2 cut(s)	578, 862
TasI	AATT	8 cut(s)	185, 703, 715, 1209, 1478, 1576, 1719, 2028
TatI	WGTACW	1 cut(s)	2347
TauI	GCSGC	1 cut(s)	881
TfiI	GAWTC	1 cut(s)	164
Tru1I	TTAA	4 cut(s)	1113, 1689, 2435, 2448
Tru9I	TTAA	4 cut(s)	1113, 1689, 2435, 2448
TscAI	CASTG	9 cut(s)	286, 616, 683, 1123, 1426, 1630, 1788, 1848, 2086
TseFI	GTSAC	1 cut(s)	24
Tsp45I	GTSAC	1 cut(s)	24
TspDTI	ATGAA	5 cut(s)	363, 969, 1157, 1683, 2121
TspGWI	ACGGA	1 cut(s)	297
TspRI	CASTG	9 cut(s)	286, 616, 683, 1123, 1426, 1630, 1788, 1848, 2086
Vha464I	CTTAAG	1 cut(s)	2434
VneI	GTGCAC	1 cut(s)	1188
VpaK11BI	GGWCC	5 cut(s)	209, 815, 1314, 1880, 2383
XagI	CCTNNNNNAGG	1 cut(s)	204
XapI	RAATTY	3 cut(s)	703, 1576, 1719
XbaI	TCTAGA	1 cut(s)	2060
XceI	RCATGY	4 cut(s)	1100, 1957, 2078, 2260
XmiI	GTMKAC	1 cut(s)	482
Zsp2I	ATGCAT	1 cut(s)	1959

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.