Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001511

Physical Location & Seq

Genomic Coordinates Reverse (-)

54561409 .. 54566825

Gene Structure 5417 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003944

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGCCTTCGTGGTGGAGAAAGTATTCATCCAAAGAAGTAAAGAAGAAAGCAAATAAGGAGAGTTTCATTGATACCATAATGACTATACACCGAAAGCTTAAGAGTTCTTCTGAAGAAAAGTTTAACAGTAGTTCAGGAGGTTCTAGGAGACGATGTACTGACACCGTTTCAGAAATGGGTTCTCAATCCAGGGCTTTGTCACCATTAACCTCGACACAAGTATCACGCTGTCAAAGTTTTGCAGAGAGGCCTCATGCCCAACCACTACCTCTTCCTAGAGTGCAACTTTCCAACATTGGGCGTTCTGACTCTGCTGTAACTGCATCATCAAAAACAGGGTCTGATACAGGGCCCAAGCAATTGCTCTATGTACCCCTTTCAAGCCCTGGCCGTATCTTGAGCAGGGCAGTACCTGCAGATGCGGACGGTGATATAGCCACTGCTTCCATATCTAGTGATAGTTCTATTGATAGTGATGACCCGCCTGACTCACGTCTCCTTAGTCCCATGGCCTCTGACTGCGAATATGGCACCAGAACAACTCTGAACAGTCCTGCCAGGGTAATGCAAAAGGACCAATTCTCTAATGTCAACCAAAAGAACACAAAAGAGACTTTGAAGCCGGCTAATCTTCTATTCAATAATCAGATTATGACCACATCACCAAAACGGGGACCTTCAAGGACACATTTGCAGAACATACAAATTCCTTACAATGGTGCTTTCTGTAGTGCTCCAGACAGCTCCATGTCAAGTCCTTCTAGAAGTCCTATGAGAGTGTTTGGCTCTGATCAAGTTCTGATCTCCAGTTTCTGGGCAGGAAAGCCTTATCCTGATATAGCTTCTACACACTGCTCCAGTCCAGGCTCAGGTCATAATTCCGGACATAATTCGGTCGGAGGGGATCTGTCAGCACAGCTTTTTTGGCAGCAGAACAGGTGTAGCCCTGAGTGTTCTCCAATACCTAGTCCCAGAATGACCAGTCCTGGCCCAAGCTCCAGAATGACCAGTCCTGGCCCCAGCTCCAGAATACAAAGTGCTGCAGTTACCCCTCTGCACCCACGAGCTGGAGGGCCAGCCATGGAGTCACCTACAGGCCGACCCGATGATGGGAAGCAGAAAAGCCATCGATTACCACTTCCTCCAATAACAACAACTAGGACCTGTCCCTTTTCTCCTGCTTATTCACCTGCAACAACTCCCACTGTTCCTCGCAGTCCTGGTAGGGCAGAAAATCCACAAAGTCCTGGTTCACGCTGGAAGAAGGGGCGCCTGCTTGGGAGGGGTACATTTGGACATGTGTATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTATTTGCAGATGATGCAAAGTCAAAGGAAAGCGCACAGCAGCTTGGGCAAGAAATTGCTTTGCTAAGTCGACTACGACATCCAAATATAGTGCAGTATTTAGGATCTGAGACGGTAGACGATAAACTCTACATATACTTGGAGTATGTGTCTGGTGGATCCATCTATAAACTGCTTCAAGAGTATGGTCAGTTTGGTGAAATAGCAATTCGTAGTTATACTCAACAAATCTTGTCAGGGCTTTCATACTTGCACGCGAAAAACACTCTCCACAGGGATATCAAAGGAGCAAATATATTAGTAGATCCCAATGGTCGGGTAAAGTTGGCAGATTTTGGGATGGCTAAGCATATTACTGGGGAGTCTTGTCCATTATCCTTCAAGGGGAGCCCATATTGGATGGCCCCAGAGGTTATCAAGAATTCAAATGGTTGTAATCTTGCGGTTGATATATGGAGCCTGGGTTGCACTGTTCTTGAGATGGCCACGACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCTGCTATGTTTAAGATAGGAAACAGCAAGGAACTTCCTGGAATTCCTGGACATCTTTCAGAGGATGGGAAAGACTTTGTTAGGCTGTGTTTGCAACGTAACCCACTGCATCGTCCTACAGCTGCTCAGCTTTTGGAGCATCCTTTTGTTAAGAATGTTGCTCCACTGGAAAGACCCATTATGAGTGTGGAGCCTTCTGAAGGACCACCAGCGGTGACAAATGCAGTGAGATCTCAGGCCTTTGGACATGGGAGAAATAATTTGCACTTAGAATCTGAAGGGATGACTATTCACCAGTCCAGAGGCTCAAGAACTGGATCAGCATCAAGACATGTCCACACACCAAGAAATGTGTCTTGCCCAGTTTCACCCATTGAAAGCCCACTTCTCCAGTCTAGATCACCACAACATGTCAGCGGAAGGATGTCTCCCTCTCCCATATCTAGCCCCCATATCACATCCGGTGCATCTACACCTCTCACTGGTGGTGGTGGTGCAATCCCTTTTCAACACTTGAAGCAACCAACAACCTACTTACATGAAGGCACACAGATGACCCAGAGATCCCAGAACAGTAGTTTCTATACAAATGGCAGCATGCGATATCATGAGCCAAAGCCTGATCTATTTCGAGGGATTCCGCAGGCCTCTCATGATTTCCGGGATGTAGTTTCATCTGATAATGTTGTGCACGGAGACCAGTTTTGGAAGCCTGTTCCTGGGCAGCAAAGAGAGTTCTGTGATATGCAGTCGGTTTTGGCCGACTGTGTGTCTCAGCAGCTCTTAATGGATCATACGAAGCTGAACCCATCCATGGACCTAAATCTTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0001932 GO:0001934 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009893 GO:0009987 GO:0010016 GO:0010098 GO:0010103 GO:0010229 GO:0010374 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090698 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

904

Amino Acids

98.31

Weight (kDa)

9.23

Isoelectric Point (pI)

59.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	421 - 676	5.5e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	423 - 672	1.1e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63700 AT1G63700
fragaria_vesca	FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920
malus_domestica	MD01G1205500.v1.1 MD06G1085900.v1.1 MD07G1274900.v1.1
prunus_persica	Prupe.2G298100_v2.0.a1 Prupe.2G298100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1
pyrus_communis	pycom01g21500 pycom06g08220 pycom07g25100
rosa_chinensis	RchiOBHm_Chr1g0377881 RchiOBHm_Chr7g0197281
rosa_laevigata	RLG00000003944 RLG00000026489
rosa_multiflora	Rmu_co8459889.1_g000001 Rmu_sc0004491.1_g000001 Rmu_sc0004824.1_g000011 Rmu_sc0010019.1_g000003 Rmu_sc0017623.1_g000004 Rmu_sc0030897.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258510 Rroxscaffold_4G00280980
rosa_rugosa	Rorug01G0405400 Rorug07G0039200
rosa_samantha	Rh1AG426400 Rh1BG382900 Rh1CG396700 Rh1DG413900 Rh7AG164200 Rh7BG166000 Rh7CG172700 Rh7DG165400
rosa_wichuraiana	Rw1G037210 Rw7G014320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1198
Acc36I	ACCTGC	2 cut(s)	421, 1198
AccB1I	GGYRCC	2 cut(s)	530, 1269
AccB7I	CCANNNNNTGG	2 cut(s)	813, 1067
AccI	GTMKAC	2 cut(s)	1426, 1473
AccII	CGCG	1 cut(s)	1613
AccIII	TCCGGA	1 cut(s)	881
AciI	CCGC	6 cut(s)	422, 482, 1799, 2090, 2295, 2519
AclWI	GGATC	8 cut(s)	912, 1468, 1509, 1522, 1655, 2203, 2436, 2676
AcoI	YGGCCR	3 cut(s)	388, 1839, 2637
AcsI	RAATTY	3 cut(s)	705, 1777, 1920
AcuI	CTGAAG	3 cut(s)	132, 2097, 2175
AcyI	GRCGYC	1 cut(s)	1270
AfaI	GTAC	4 cut(s)	157, 372, 411, 1288
AflII	CTTAAG	1 cut(s)	98
AflIII	ACRYGT	3 cut(s)	1297, 2209, 2287
AhdI	GACNNNNNGTC	1 cut(s)	2647
AjiI	CACGTC	1 cut(s)	494
Alw21I	GWGCWC	2 cut(s)	736, 2571
Alw26I	GTCTC	7 cut(s)	142, 500, 605, 1460, 2310, 2568, 2655
Alw44I	GTGCAC	1 cut(s)	2567
AlwI	GGATC	8 cut(s)	912, 1468, 1509, 1522, 1655, 2203, 2436, 2676
AlwNI	CAGNNNCTG	3 cut(s)	341, 413, 813
Aor13HI	TCCGGA	1 cut(s)	881
ApaI	GGGCCC	1 cut(s)	354
ApaLI	GTGCAC	1 cut(s)	2567
ApeKI	GCWGC	8 cut(s)	928, 1040, 1396, 1880, 2000, 2472, 2602, 2656
ApoI	RAATTY	3 cut(s)	705, 1777, 1920
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
Asp700I	GAANNNNTTC	1 cut(s)	22
AspLEI	GCGC	2 cut(s)	1272, 1391
AsuC2I	CCSGG	1 cut(s)	2540
AvaII	GGWCC	5 cut(s)	574, 674, 1161, 2081, 2695
BaeGI	GKGCMC	2 cut(s)	354, 2571
BaeI	ACNNNNGTAYC	4 cut(s)	204, 237, 1286, 1319
BalI	TGGCCA	1 cut(s)	1841
BamHI	GGATCC	1 cut(s)	1514
BanI	GGYRCC	2 cut(s)	530, 1269
BanII	GRGCYC	2 cut(s)	354, 1748
BauI	CACGAG	1 cut(s)	1062
Bbv12I	GWGCWC	2 cut(s)	736, 2571
BbvI	GCAGC	8 cut(s)	940, 1027, 1408, 1867, 1987, 2484, 2614, 2668
BccI	CCATC	8 cut(s)	1103, 1134, 1526, 1690, 1750, 1831, 1937, 2695
BceAI	ACGGC	1 cut(s)	375
BclI	TGATCA	1 cut(s)	790
BcnI	CCSGG	1 cut(s)	2540
BcoDI	GTCTC	7 cut(s)	142, 500, 605, 1460, 2310, 2568, 2655
BfaI	CTAG	9 cut(s)	144, 276, 453, 762, 966, 1158, 2274, 2322, 2710
BfmI	CTRYAG	5 cut(s)	414, 727, 1041, 1092, 1995
BfoI	RGCGCY	1 cut(s)	1273
BfrI	CTTAAG	1 cut(s)	98
BfuAI	ACCTGC	2 cut(s)	421, 1198
BglII	AGATCT	1 cut(s)	2108
BisI	GCNGC	8 cut(s)	929, 1041, 1397, 1881, 2001, 2473, 2603, 2657
BlpI	GCTNAGC	2 cut(s)	1701, 2004
BlsI	GCNGC	8 cut(s)	930, 1042, 1398, 1882, 2002, 2474, 2604, 2658
Bme18I	GGWCC	5 cut(s)	574, 674, 1161, 2081, 2695
BmeRI	GACNNNNNGTC	1 cut(s)	2647
BmgBI	CACGTC	1 cut(s)	494
BmrI	ACTGGG	2 cut(s)	1722, 2234
BmsI	GCATC	7 cut(s)	332, 409, 1360, 1996, 2026, 2210, 2354
BmuI	ACTGGG	2 cut(s)	1722, 2234
BoxI	GACNNNNGTC	1 cut(s)	492
BpmI	CTGGAG	7 cut(s)	720, 790, 841, 982, 1009, 1089, 2252
Bpu10I	CCTNAGC	1 cut(s)	868
Bpu1102I	GCTNAGC	2 cut(s)	1701, 2004
BpuEI	CTTGAG	3 cut(s)	418, 1853, 2170
BpuMI	CCSGG	1 cut(s)	2540
Bsa29I	ATCGAT	1 cut(s)	1129
BsaBI	GATNNNNATC	1 cut(s)	2200
BsaHI	GRCGYC	1 cut(s)	1270
BsaI	GGTCTC	1 cut(s)	2568
BsaJI	CCNNGG	9 cut(s)	189, 385, 507, 558, 1080, 1816, 1856, 2597, 2691
BsaWI	WCCGGW	2 cut(s)	881, 2339
BsaXI	ACNNNNNCTCC	6 cut(s)	139, 169, 1490, 1520, 1804, 1834
Bse118I	RCCGGY	1 cut(s)	622
Bse3DI	GCAATG	1 cut(s)	1347
Bse8I	GATNNNNATC	1 cut(s)	2200
BseAI	TCCGGA	1 cut(s)	881
BseCI	ATCGAT	1 cut(s)	1129
BseDI	CCNNGG	9 cut(s)	189, 385, 507, 558, 1080, 1816, 1856, 2597, 2691
BseJI	GATNNNNATC	1 cut(s)	2200
BseMI	GCAATG	1 cut(s)	1347
BseMII	CTCAG	6 cut(s)	882, 939, 1455, 2018, 2126, 2666
BseSI	GKGCMC	2 cut(s)	354, 2571
BseXI	GCAGC	8 cut(s)	940, 1027, 1408, 1867, 1987, 2484, 2614, 2668
BseYI	CCCAGC	1 cut(s)	1019
BsgI	GTGCAG	2 cut(s)	1040, 1469
Bsh1236I	CGCG	1 cut(s)	1613
Bsh1285I	CGRYCG	1 cut(s)	897
BshNI	GGYRCC	2 cut(s)	530, 1269
BshVI	ATCGAT	1 cut(s)	1129
BsiEI	CGRYCG	1 cut(s)	897
BsiHKAI	GWGCWC	2 cut(s)	736, 2571
BsiSI	CCGG	4 cut(s)	623, 882, 2340, 2539
BslFI	GGGAC	4 cut(s)	489, 687, 954, 1152
BsmAI	GTCTC	7 cut(s)	142, 500, 605, 1460, 2310, 2568, 2655
BsmBI	CGTCTC	3 cut(s)	142, 500, 1460
BsmFI	GGGAC	4 cut(s)	489, 687, 954, 1152
Bso31I	GGTCTC	1 cut(s)	2568
Bsp120I	GGGCCC	1 cut(s)	350
Bsp1286I	GDGCHC	4 cut(s)	354, 736, 1748, 2571
Bsp13I	TCCGGA	1 cut(s)	881
Bsp1720I	GCTNAGC	2 cut(s)	1701, 2004
Bsp19I	CCATGG	3 cut(s)	507, 1080, 2691
BspACI	CCGC	6 cut(s)	422, 482, 1799, 2090, 2295, 2519
BspCNI	CTCAG	6 cut(s)	881, 940, 1456, 2017, 2125, 2665
BspDI	ATCGAT	1 cut(s)	1129
BspEI	TCCGGA	1 cut(s)	881
BspFNI	CGCG	1 cut(s)	1613
BspHI	TCATGA	2 cut(s)	2485, 2530
BspMAI	CTGCAG	2 cut(s)	418, 1045
BspMI	ACCTGC	2 cut(s)	421, 1198
BspPI	GGATC	8 cut(s)	912, 1468, 1509, 1522, 1655, 2203, 2436, 2676
BspT107I	GGYRCC	2 cut(s)	530, 1269
BspTI	CTTAAG	1 cut(s)	98
BspTNI	GGTCTC	1 cut(s)	2568
BsrDI	GCAATG	1 cut(s)	1347
BsrFI	RCCGGY	1 cut(s)	622
BssAI	RCCGGY	1 cut(s)	622
BssECI	CCNNGG	9 cut(s)	189, 385, 507, 558, 1080, 1816, 1856, 2597, 2691
BssNI	GRCGYC	1 cut(s)	1270
BssSI	CACGAG	1 cut(s)	1062
BssT1I	CCWWGG	4 cut(s)	507, 1080, 1856, 2691
Bst2BI	CACGAG	1 cut(s)	1062
Bst6I	CTCTTC	1 cut(s)	276
BstACI	GRCGYC	1 cut(s)	1270
BstAFI	CTTAAG	1 cut(s)	98
BstAPI	GCANNNNNTGC	2 cut(s)	413, 1370
BstC8I	GCNNGC	6 cut(s)	624, 1077, 1274, 1611, 2477, 2523
BstDSI	CCRYGG	3 cut(s)	507, 1080, 2691
BstENI	CCTNNNNNAGG	1 cut(s)	2076
BstFNI	CGCG	1 cut(s)	1613
BstH2I	RGCGCY	1 cut(s)	1273
BstHHI	GCGC	2 cut(s)	1272, 1391
BstMAI	GTCTC	7 cut(s)	142, 500, 605, 1460, 2310, 2568, 2655
BstMCI	CGRYCG	1 cut(s)	897
BstMWI	GCNNNNNNNGC	9 cut(s)	320, 413, 528, 925, 1370, 1402, 1821, 1969, 2014
BstNSI	RCATGY	4 cut(s)	1301, 2213, 2291, 2479
BstPAI	GACNNNNGTC	1 cut(s)	492
BstSFI	CTRYAG	5 cut(s)	414, 727, 1041, 1092, 1995
BstSLI	GKGCMC	2 cut(s)	354, 2571
BstUI	CGCG	1 cut(s)	1613
BstV1I	GCAGC	8 cut(s)	940, 1027, 1408, 1867, 1987, 2484, 2614, 2668
BstX2I	RGATCY	6 cut(s)	904, 1460, 1514, 1660, 2108, 2441
BstYI	RGATCY	6 cut(s)	904, 1460, 1514, 1660, 2108, 2441
Bsu15I	ATCGAT	1 cut(s)	1129
BsuTUI	ATCGAT	1 cut(s)	1129
BtgI	CCRYGG	3 cut(s)	507, 1080, 2691
BtrI	CACGTC	1 cut(s)	494
BtsI	GCAGTG	4 cut(s)	438, 850, 1982, 2109
BtsIMutI	CAGTG	9 cut(s)	438, 850, 1203, 1324, 1824, 1982, 2042, 2109, 2358
BveI	ACCTGC	2 cut(s)	421, 1198
Cac8I	GCNNGC	6 cut(s)	624, 1077, 1274, 1611, 2477, 2523
CaiI	CAGNNNCTG	3 cut(s)	341, 413, 813
CciI	TCATGA	2 cut(s)	2485, 2530
CfoI	GCGC	2 cut(s)	1272, 1391
Cfr10I	RCCGGY	1 cut(s)	622
ClaI	ATCGAT	1 cut(s)	1129
Csp6I	GTAC	4 cut(s)	156, 371, 410, 1287
CviQI	GTAC	4 cut(s)	156, 371, 410, 1287
DinI	GGCGCC	1 cut(s)	1271
DriI	GACNNNNNGTC	1 cut(s)	2647
EaeI	YGGCCR	3 cut(s)	388, 1839, 2637
Eam1104I	CTCTTC	1 cut(s)	276
Eam1105I	GACNNNNNGTC	1 cut(s)	2647
EarI	CTCTTC	1 cut(s)	276
Eco130I	CCWWGG	4 cut(s)	507, 1080, 1856, 2691
Eco147I	AGGCCT	3 cut(s)	250, 2117, 2525
Eco24I	GRGCYC	2 cut(s)	354, 1748
Eco31I	GGTCTC	1 cut(s)	2568
Eco32I	GATATC	2 cut(s)	1636, 2483
Eco47I	GGWCC	5 cut(s)	574, 674, 1161, 2081, 2695
Eco57I	CTGAAG	3 cut(s)	132, 2097, 2175
EcoNI	CCTNNNNNAGG	1 cut(s)	2076
EcoO109I	RGGNCCY	3 cut(s)	350, 674, 1161
EcoRI	GAATTC	2 cut(s)	1777, 1920
EcoRV	GATATC	2 cut(s)	1636, 2483
EcoT14I	CCWWGG	4 cut(s)	507, 1080, 1856, 2691
EcoT38I	GRGCYC	2 cut(s)	354, 1748
EgeI	GGCGCC	1 cut(s)	1271
EheI	GGCGCC	1 cut(s)	1271
ErhI	CCWWGG	4 cut(s)	507, 1080, 1856, 2691
Esp3I	CGTCTC	3 cut(s)	142, 500, 1460
FaqI	GGGAC	4 cut(s)	489, 687, 954, 1152
FauI	CCCGC	1 cut(s)	489
FbaI	TGATCA	1 cut(s)	790
FblI	GTMKAC	2 cut(s)	1426, 1473
Fnu4HI	GCNGC	8 cut(s)	929, 1041, 1397, 1881, 2001, 2473, 2603, 2657
FriOI	GRGCYC	2 cut(s)	354, 1748
Fsp4HI	GCNGC	8 cut(s)	929, 1041, 1397, 1881, 2001, 2473, 2603, 2657
FspBI	CTAG	9 cut(s)	144, 276, 453, 762, 966, 1158, 2274, 2322, 2710
GlaI	GCGC	2 cut(s)	1271, 1390
GluI	GCNGC	8 cut(s)	929, 1041, 1397, 1881, 2001, 2473, 2603, 2657
GsaI	CCCAGC	1 cut(s)	1023
GsuI	CTGGAG	7 cut(s)	720, 790, 841, 982, 1009, 1089, 2252
HaeII	RGCGCY	1 cut(s)	1273
HapII	CCGG	4 cut(s)	623, 882, 2340, 2539
HhaI	GCGC	2 cut(s)	1272, 1391
Hin1I	GRCGYC	1 cut(s)	1270
Hin6I	GCGC	2 cut(s)	1270, 1389
HinP1I	GCGC	2 cut(s)	1270, 1389
HincII	GTYRAC	2 cut(s)	592, 1427
HindII	GTYRAC	2 cut(s)	592, 1427
HindIII	AAGCTT	1 cut(s)	95
HinfI	GANTC	6 cut(s)	308, 488, 1085, 1718, 2150, 2515
HpaII	CCGG	4 cut(s)	623, 882, 2340, 2539
Hpy166II	GTNNAC	6 cut(s)	592, 1253, 1427, 1474, 2215, 2569
Hpy8I	GTNNAC	6 cut(s)	592, 1253, 1427, 1474, 2215, 2569
HpyCH4IV	ACGT	2 cut(s)	493, 1975
HpyF10VI	GCNNNNNNNGC	9 cut(s)	320, 413, 528, 925, 1370, 1402, 1821, 1969, 2014
HpySE526I	ACGT	2 cut(s)	493, 1975
Hsp92I	GRCGYC	1 cut(s)	1270
HspAI	GCGC	2 cut(s)	1270, 1389
KasI	GGCGCC	1 cut(s)	1269
Kpn2I	TCCGGA	1 cut(s)	881
KroI	GCCGGC	1 cut(s)	622
KroNI	GCCGGC	1 cut(s)	624
Ksp22I	TGATCA	1 cut(s)	790
Lsp1109I	GCAGC	8 cut(s)	940, 1027, 1408, 1867, 1987, 2484, 2614, 2668
LweI	GCATC	7 cut(s)	332, 409, 1360, 1996, 2026, 2210, 2354
MaeI	CTAG	9 cut(s)	144, 276, 453, 762, 966, 1158, 2274, 2322, 2710
MaeII	ACGT	2 cut(s)	493, 1975
MaeIII	GTNAC	7 cut(s)	198, 316, 1045, 1086, 1351, 1976, 2092
MboII	GAAGA	7 cut(s)	55, 99, 125, 263, 623, 1273, 2696
MfeI	CAATTG	1 cut(s)	359
MflI	RGATCY	6 cut(s)	904, 1460, 1514, 1660, 2108, 2441
MhlI	GDGCHC	4 cut(s)	354, 736, 1748, 2571
MlsI	TGGCCA	1 cut(s)	1841
MluNI	TGGCCA	1 cut(s)	1841
Mly113I	GGCGCC	1 cut(s)	1270
MlyI	GAGTC	4 cut(s)	302, 482, 1094, 1727
MmeI	TCCRAC	2 cut(s)	315, 877
Mox20I	TGGCCA	1 cut(s)	1841
MroI	TCCGGA	1 cut(s)	881
MroNI	GCCGGC	1 cut(s)	622
MroXI	GAANNNNTTC	1 cut(s)	22
MscI	TGGCCA	1 cut(s)	1841
MseI	TTAA	7 cut(s)	99, 123, 206, 1314, 1890, 2028, 2663
MslI	CAYNNNNRTG	1 cut(s)	2429
Msp20I	TGGCCA	1 cut(s)	1841
MspA1I	CMGCKG	3 cut(s)	2000, 2090, 2295
MspCI	CTTAAG	1 cut(s)	98
MspI	CCGG	4 cut(s)	623, 882, 2340, 2539
MunI	CAATTG	1 cut(s)	359
MvnI	CGCG	1 cut(s)	1613
MwoI	GCNNNNNNNGC	9 cut(s)	320, 413, 528, 925, 1370, 1402, 1821, 1969, 2014
NaeI	GCCGGC	1 cut(s)	624
NarI	GGCGCC	1 cut(s)	1270
NciI	CCSGG	1 cut(s)	2540
NcoI	CCATGG	3 cut(s)	507, 1080, 2691
NgoMIV	GCCGGC	1 cut(s)	622
NmuCI	GTSAC	3 cut(s)	198, 1086, 2092
NspI	RCATGY	4 cut(s)	1301, 2213, 2291, 2479
PaeI	GCATGC	1 cut(s)	2479
PagI	TCATGA	2 cut(s)	2485, 2530
PaqCI	CACCTGC	1 cut(s)	1198
PceI	AGGCCT	3 cut(s)	250, 2117, 2525
PciI	ACATGT	3 cut(s)	1297, 2209, 2287
PdiI	GCCGGC	1 cut(s)	624
PdmI	GAANNNNTTC	1 cut(s)	22
PfeI	GAWTC	2 cut(s)	2150, 2515
PflMI	CCANNNNNTGG	2 cut(s)	813, 1067
PfoI	TCCNGGA	3 cut(s)	1915, 1924, 2538
PkrI	GCNGC	8 cut(s)	930, 1042, 1398, 1882, 2002, 2474, 2604, 2658
PleI	GAGTC	4 cut(s)	302, 482, 1093, 1726
PluTI	GGCGCC	1 cut(s)	1273
PpsI	GAGTC	4 cut(s)	302, 482, 1093, 1726
PpuMI	RGGWCCY	2 cut(s)	674, 1161
PscI	ACATGT	3 cut(s)	1297, 2209, 2287
PshAI	GACNNNNGTC	1 cut(s)	492
Psp5II	RGGWCCY	2 cut(s)	674, 1161
PspFI	CCCAGC	1 cut(s)	1019
PspOMI	GGGCCC	1 cut(s)	350
PspPPI	RGGWCCY	2 cut(s)	674, 1161
PstI	CTGCAG	2 cut(s)	418, 1045
PstNI	CAGNNNCTG	3 cut(s)	341, 413, 813
PsuI	RGATCY	6 cut(s)	904, 1460, 1514, 1660, 2108, 2441
PvuII	CAGCTG	1 cut(s)	2000
RsaI	GTAC	4 cut(s)	157, 372, 411, 1288
RsaNI	GTAC	4 cut(s)	156, 371, 410, 1287
RseI	CAYNNNNRTG	1 cut(s)	2429
SalI	GTCGAC	1 cut(s)	1425
SaqAI	TTAA	7 cut(s)	99, 123, 206, 1314, 1890, 2028, 2663
SatI	GCNGC	8 cut(s)	929, 1041, 1397, 1881, 2001, 2473, 2603, 2657
SchI	GAGTC	4 cut(s)	302, 482, 1094, 1727
SduI	GDGCHC	4 cut(s)	354, 736, 1748, 2571
SfaNI	GCATC	7 cut(s)	332, 409, 1360, 1996, 2026, 2210, 2354
SfcI	CTRYAG	5 cut(s)	414, 727, 1041, 1092, 1995
SfoI	GGCGCC	1 cut(s)	1271
SinI	GGWCC	5 cut(s)	574, 674, 1161, 2081, 2695
SmiMI	CAYNNNNRTG	1 cut(s)	2429
SmlI	CTYRAG	4 cut(s)	98, 397, 1832, 2185
SmoI	CTYRAG	4 cut(s)	98, 397, 1832, 2185
SphI	GCATGC	1 cut(s)	2479
SseBI	AGGCCT	3 cut(s)	250, 2117, 2525
SsiI	CCGC	6 cut(s)	422, 482, 1799, 2090, 2295, 2519
SspDI	GGCGCC	1 cut(s)	1269
SspMI	CTAG	9 cut(s)	144, 276, 453, 762, 966, 1158, 2274, 2322, 2710
StuI	AGGCCT	3 cut(s)	250, 2117, 2525
StyI	CCWWGG	4 cut(s)	507, 1080, 1856, 2691
TaiI	ACGT	2 cut(s)	496, 1978
TaqI	TCGA	4 cut(s)	212, 1129, 1426, 2509
TaqII	GACCGA	1 cut(s)	883
TatI	WGTACW	1 cut(s)	155
TfiI	GAWTC	2 cut(s)	2150, 2515
Tru1I	TTAA	7 cut(s)	99, 123, 206, 1314, 1890, 2028, 2663
Tru9I	TTAA	7 cut(s)	99, 123, 206, 1314, 1890, 2028, 2663
TscAI	CASTG	9 cut(s)	445, 857, 1210, 1324, 1831, 1989, 2049, 2109, 2365
TseFI	GTSAC	3 cut(s)	198, 1086, 2092
TseI	GCWGC	8 cut(s)	928, 1040, 1396, 1880, 2000, 2472, 2602, 2656
Tsp45I	GTSAC	3 cut(s)	198, 1086, 2092
TspDTI	ATGAA	7 cut(s)	15, 55, 1358, 1590, 1884, 2433, 2541
TspGWI	ACGGA	1 cut(s)	2586
TspRI	CASTG	9 cut(s)	445, 857, 1210, 1324, 1831, 1989, 2049, 2109, 2365
Van91I	CCANNNNNTGG	2 cut(s)	813, 1067
Vha464I	CTTAAG	1 cut(s)	98
VneI	GTGCAC	1 cut(s)	2567
VpaK11BI	GGWCC	5 cut(s)	574, 674, 1161, 2081, 2695
XagI	CCTNNNNNAGG	1 cut(s)	2076
XapI	RAATTY	3 cut(s)	705, 1777, 1920
XbaI	TCTAGA	2 cut(s)	761, 2273
XceI	RCATGY	4 cut(s)	1301, 2213, 2291, 2479
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2062
XmiI	GTMKAC	2 cut(s)	1426, 1473
XmnI	GAANNNNTTC	1 cut(s)	22
XspI	CTAG	9 cut(s)	144, 276, 453, 762, 966, 1158, 2274, 2322, 2710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.