Rmu_co8459889.1_g000001

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8459889.1
Physical Location & Seq
Reverse (-)
1 .. 1461
1461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8459889.1_g000001.1.cds

Sequence Viewer

Length: 1304 bp
atgccttcatggtgggggaagtcgtcatccaaagaagcaaagaagaagtcagggagcaaggaaagtttcatcgattcattacatcggaaatttaagttttcatctgaaagtagagtgaatggtagatctggagggtctcgaagaccatgtagtgatgccatttcggaaaaggggtctcgatctcctctagaatcaagatctccttcaccctccaaacaagttgcaagaactcaaagttttgctgaaaggagtatttctcaaccacttccacttcctggtcaacatcttgctcatgtcggacgtacagattctggttttagtatatcaccaaaaccaagatcagataaatgctccaagccattattgtttctacctctcccgagacctcggtgcattggtgggaggtcaaatcgtgctgactttgatgatggagatatgaatactggttcagtttctagtgatacctctgttgatagtgaagatccagctgactcaggtctccgcagccctcaggcaattgactatgaaagtgggactagaactgcagctggcagtccttccagtgtgatgctcaaggatcagtccttcactgtggccccagtaatctcaagagaggcaaaaaaaccagccaacatttcattcattaatcaaatttccccttcatcgcctaaacggagacctttgagcagtcatgtgccaaatctccaggtaccttatcaaggagctttctggagtgctcctgacagctccatgtcaagtccttctagaagtccaattagagcatttggaactgagcaagccgtgaactctgctttctgggctccaaaaacttatactgatgtcaccatagcaggatctggccacggctccagtccaggttctggtcacaattctgggcacaattcaatgggaggggatatgtcgggacagttgttttggcagcaaagcaagggtagccccgagtattctccagtacctagtcccagattgacaagccctggcccaggctcaagaattcatagtggtgctgttacacctattcatcccagagcaggtggggctctcaatgattcgcagacaagctggcctgatgatgggaaacaacaaagtcaccgtttgcctcttcctccagtaacaatttcaaatgcatcacccttttctcattcaaattcagcagcaacatctccttctgtgccacgaagtcctggaagggcagaaaatccagcgagccctggttctcggtggaaaaaggggaagctgctgggtagaggcacatttggacatgtttatgtcggttttaatag

Protein Analysis

434

Amino Acids

46.04

Weight (kDa)

10.17

Isoelectric Point (pI)

78.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1043
Acc36I ACCTGC 1 cut(s) 1043
Acc65I GGTACC 1 cut(s) 709
AccB1I GGYRCC 1 cut(s) 709
AccB7I CCANNNNNTGG 2 cut(s) 275, 881
AciI CCGC 1 cut(s) 502
AclWI GGATC 3 cut(s) 476, 585, 862
AcoI YGGCCR 1 cut(s) 859
AcsI RAATTY 4 cut(s) 89, 651, 1014, 1168
AfaI GTAC 3 cut(s) 304, 711, 975
AfiI CCNNNNNNNGG 6 cut(s) 275, 719, 881, 1004, 1052, 1094
AflIII ACRYGT 1 cut(s) 1282
AgsI TTSAA 3 cut(s) 906, 1143, 1167
AjnI CCWGG 7 cut(s) 274, 705, 874, 997, 1003, 1204, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 623, 655
AluBI AGCT 6 cut(s) 488, 548, 725, 747, 1083, 1258
AluI AGCT 6 cut(s) 488, 548, 725, 747, 1083, 1258
Alw21I GWGCWC 1 cut(s) 739
Alw26I GTCTC 5 cut(s) 141, 180, 376, 503, 670
AlwI GGATC 3 cut(s) 476, 585, 862
AlwNI CAGNNNCTG 3 cut(s) 311, 857, 881
Ama87I CYCGRG 2 cut(s) 379, 959
AoxI GGCC 4 cut(s) 594, 859, 1000, 1085
ApeKI GCWGC 5 cut(s) 504, 545, 940, 1175, 1258
ApoI RAATTY 4 cut(s) 89, 651, 1014, 1168
ArsI GACNNNNNNTTYG 4 cut(s) 32, 64, 918, 950
AseI ATTAAT 1 cut(s) 645
Asp718I GGTACC 1 cut(s) 709
AspS9I GGNCC 2 cut(s) 595, 1001
AsuHPI GGTGA 5 cut(s) 198, 318, 835, 1103, 1143
AvaI CYCGRG 2 cut(s) 379, 959
AxyI CCTNAGG 1 cut(s) 510
BaeGI GKGCMC 1 cut(s) 900
BaeI ACNNNNGTAYC 2 cut(s) 453, 486
BalI TGGCCA 1 cut(s) 861
BanI GGYRCC 1 cut(s) 709
BanII GRGCYC 3 cut(s) 823, 1063, 1232
BbsI GAAGAC 1 cut(s) 148
Bbv12I GWGCWC 1 cut(s) 739
BbvI GCAGC 5 cut(s) 516, 557, 952, 1187, 1245
BccI CCATC 2 cut(s) 422, 1088
BceAI ACGGC 2 cut(s) 785, 880
BciT130I CCWGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
BcoDI GTCTC 5 cut(s) 141, 180, 376, 503, 670
BfaI CTAG 5 cut(s) 188, 456, 537, 765, 978
BfmI CTRYAG 1 cut(s) 543
BfuAI ACCTGC 1 cut(s) 1043
BglII AGATCT 2 cut(s) 125, 197
BisI GCNGC 5 cut(s) 505, 546, 941, 1176, 1259
BlsI GCNGC 5 cut(s) 506, 547, 942, 1177, 1260
Bme1390I CCNGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
BmeT110I CYCGRG 2 cut(s) 379, 959
BmgT120I GGNCC 2 cut(s) 595, 1001
BmiI GGNNCC 4 cut(s) 597, 711, 822, 868
BmrFI CCNGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
BmrI ACTGGG 1 cut(s) 593
BmsI GCATC 3 cut(s) 145, 558, 1157
BmuI ACTGGG 1 cut(s) 593
BoxI GACNNNNGTC 1 cut(s) 495
BpiI GAAGAC 1 cut(s) 148
BplI GAGNNNNNCTC 2 cut(s) 241, 273
BpmI CTGGAG 6 cut(s) 150, 689, 751, 853, 954, 1113
BpuEI CTTGAG 3 cut(s) 557, 592, 994
Bsa29I ATCGAT 1 cut(s) 72
BsaI GGTCTC 5 cut(s) 141, 180, 376, 503, 670
BsaJI CCNNGG 5 cut(s) 386, 862, 997, 1003, 1231
Bsc4I CCNNNNNNNGG 6 cut(s) 275, 719, 881, 1004, 1052, 1094
Bse1I ACTGG 6 cut(s) 448, 561, 599, 870, 971, 1130
Bse21I CCTNAGG 1 cut(s) 510
BseBI CCWGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
BseCI ATCGAT 1 cut(s) 72
BseDI CCNNGG 5 cut(s) 386, 862, 997, 1003, 1231
BseGI GGATG 2 cut(s) 26, 1042
BseLI CCNNNNNNNGG 6 cut(s) 275, 719, 881, 1004, 1052, 1094
BseMII CTCAG 3 cut(s) 507, 524, 783
BseNI ACTGG 6 cut(s) 448, 561, 599, 870, 971, 1130
BseRI GAGGAG 1 cut(s) 174
BseSI GKGCMC 1 cut(s) 900
BseXI GCAGC 5 cut(s) 516, 557, 952, 1187, 1245
BseYI CCCAGC 1 cut(s) 1261
BshFI GGCC 4 cut(s) 596, 861, 1002, 1087
BshNI GGYRCC 1 cut(s) 709
BshVI ATCGAT 1 cut(s) 72
BsiHKAI GWGCWC 1 cut(s) 739
BsiHKCI CYCGRG 2 cut(s) 379, 959
BslFI GGGAC 3 cut(s) 547, 939, 966
BslI CCNNNNNNNGG 6 cut(s) 275, 719, 881, 1004, 1052, 1094
BsmAI GTCTC 5 cut(s) 141, 180, 376, 503, 670
BsmFI GGGAC 3 cut(s) 547, 939, 966
BsnI GGCC 4 cut(s) 596, 861, 1002, 1087
Bso31I GGTCTC 5 cut(s) 141, 180, 376, 503, 670
BsoBI CYCGRG 2 cut(s) 379, 959
Bsp1286I GDGCHC 5 cut(s) 739, 823, 900, 1063, 1232
Bsp143I GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
BspACI CCGC 1 cut(s) 502
BspANI GGCC 4 cut(s) 596, 861, 1002, 1087
BspCNI CTCAG 3 cut(s) 506, 523, 784
BspDI ATCGAT 1 cut(s) 72
BspLI GGNNCC 4 cut(s) 597, 711, 822, 868
BspMAI CTGCAG 1 cut(s) 547
BspMI ACCTGC 1 cut(s) 1043
BspPI GGATC 3 cut(s) 476, 585, 862
BspT107I GGYRCC 1 cut(s) 709
BspTNI GGTCTC 5 cut(s) 141, 180, 376, 503, 670
BsrI ACTGG 6 cut(s) 448, 561, 599, 870, 971, 1130
BssECI CCNNGG 5 cut(s) 386, 862, 997, 1003, 1231
BssMI GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
Bst2UI CCWGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
Bst4CI ACNGT 3 cut(s) 592, 930, 1115
Bst6I CTCTTC 1 cut(s) 1128
BstC8I GCNNGC 4 cut(s) 550, 798, 1085, 1228
BstDEI CTNAG 3 cut(s) 493, 510, 792
BstDSI CCRYGG 1 cut(s) 862
BstENI CCTNNNNNAGG 2 cut(s) 717, 1002
BstF5I GGATG 2 cut(s) 26, 1042
BstKTI GATC 7 cut(s) 128, 182, 200, 341, 484, 580, 857
BstMAI GTCTC 5 cut(s) 141, 180, 376, 503, 670
BstMBI GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
BstMWI GCNNNNNNNGC 3 cut(s) 818, 954, 1058
BstNI CCWGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
BstNSI RCATGY 1 cut(s) 1286
BstPAI GACNNNNGTC 1 cut(s) 495
BstSCI CCNGG 7 cut(s) 274, 705, 874, 997, 1003, 1204, 1231
BstSFI CTRYAG 1 cut(s) 543
BstSLI GKGCMC 1 cut(s) 900
BstV1I GCAGC 5 cut(s) 516, 557, 952, 1187, 1245
BstV2I GAAGAC 1 cut(s) 148
BstX2I RGATCY 4 cut(s) 125, 197, 481, 854
BstYI RGATCY 4 cut(s) 125, 197, 481, 854
Bsu15I ATCGAT 1 cut(s) 72
Bsu36I CCTNAGG 1 cut(s) 510
BsuRI GGCC 4 cut(s) 596, 861, 1002, 1087
BsuTUI ATCGAT 1 cut(s) 72
BtgI CCRYGG 1 cut(s) 862
BtgZI GCGATG 1 cut(s) 648
BtsCI GGATG 2 cut(s) 26, 1042
BtsIMutI CAGTG 2 cut(s) 568, 588
BveI ACCTGC 1 cut(s) 1043
Cac8I GCNNGC 4 cut(s) 550, 798, 1085, 1228
CaiI CAGNNNCTG 3 cut(s) 311, 857, 881
Cfr13I GGNCC 2 cut(s) 595, 1001
ClaI ATCGAT 1 cut(s) 72
Csp6I GTAC 3 cut(s) 303, 710, 974
CviAII CATG 6 cut(s) 9, 147, 293, 692, 751, 1283
CviQI GTAC 3 cut(s) 303, 710, 974
DdeI CTNAG 3 cut(s) 493, 510, 792
DpnI GATC 7 cut(s) 127, 181, 199, 340, 483, 579, 856
DpnII GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
EaeI YGGCCR 1 cut(s) 859
Eam1104I CTCTTC 1 cut(s) 1128
EarI CTCTTC 1 cut(s) 1128
Eco24I GRGCYC 3 cut(s) 823, 1063, 1232
Eco31I GGTCTC 5 cut(s) 141, 180, 376, 503, 670
Eco81I CCTNAGG 1 cut(s) 510
Eco88I CYCGRG 2 cut(s) 379, 959
EcoNI CCTNNNNNAGG 2 cut(s) 717, 1002
EcoRI GAATTC 1 cut(s) 1014
EcoRII CCWGG 7 cut(s) 274, 705, 874, 997, 1003, 1204, 1231
EcoT22I ATGCAT 1 cut(s) 1150
EcoT38I GRGCYC 3 cut(s) 823, 1063, 1232
FaeI CATG 6 cut(s) 12, 150, 296, 695, 754, 1286
FalI AAGNNNNNCTT 2 cut(s) 187, 219
FaqI GGGAC 3 cut(s) 547, 939, 966
FatI CATG 6 cut(s) 8, 146, 292, 691, 750, 1282
Fnu4HI GCNGC 5 cut(s) 505, 546, 941, 1176, 1259
FokI GGATG 2 cut(s) 13, 1029
FriOI GRGCYC 3 cut(s) 823, 1063, 1232
Fsp4HI GCNGC 5 cut(s) 505, 546, 941, 1176, 1259
FspBI CTAG 5 cut(s) 188, 456, 537, 765, 978
GluI GCNGC 5 cut(s) 505, 546, 941, 1176, 1259
GsaI CCCAGC 1 cut(s) 1265
GsuI CTGGAG 6 cut(s) 150, 689, 751, 853, 954, 1113
HaeIII GGCC 4 cut(s) 596, 861, 1002, 1087
Hin1II CATG 6 cut(s) 12, 150, 296, 695, 754, 1286
HincII GTYRAC 1 cut(s) 281
HindII GTYRAC 1 cut(s) 281
HinfI GANTC 5 cut(s) 74, 191, 308, 491, 1070
HphI GGTGA 5 cut(s) 198, 318, 835, 1103, 1143
Hpy166II GTNNAC 2 cut(s) 281, 805
Hpy188I TCNGA 5 cut(s) 87, 106, 166, 299, 343
Hpy8I GTNNAC 2 cut(s) 281, 805
HpyAV CCTTC 8 cut(s) 15, 213, 567, 595, 669, 771, 1197, 1203
HpyCH4III ACNGT 3 cut(s) 592, 930, 1115
HpyCH4IV ACGT 1 cut(s) 301
HpyCH4V TGCA 4 cut(s) 224, 393, 545, 1148
HpyF10VI GCNNNNNNNGC 3 cut(s) 818, 954, 1058
HpyF3I CTNAG 3 cut(s) 493, 510, 792
HpySE526I ACGT 1 cut(s) 301
Hsp92II CATG 6 cut(s) 12, 150, 296, 695, 754, 1286
KpnI GGTACC 1 cut(s) 713
Kzo9I GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
LmnI GCTCC 7 cut(s) 54, 356, 722, 742, 752, 826, 872
Lsp1109I GCAGC 5 cut(s) 516, 557, 952, 1187, 1245
LweI GCATC 3 cut(s) 145, 558, 1157
MaeI CTAG 5 cut(s) 188, 456, 537, 765, 978
MaeII ACGT 1 cut(s) 301
MaeIII GTNAC 5 cut(s) 841, 884, 1030, 1109, 1132
MalI GATC 7 cut(s) 127, 181, 199, 340, 483, 579, 856
MboI GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
MboII GAAGA 4 cut(s) 55, 153, 491, 1115
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 4 cut(s) 125, 197, 481, 854
MhlI GDGCHC 5 cut(s) 739, 823, 900, 1063, 1232
MlsI TGGCCA 1 cut(s) 861
MluCI AATT 9 cut(s) 89, 516, 651, 774, 889, 901, 1014, 1137, 1168
MluNI TGGCCA 1 cut(s) 861
MlyI GAGTC 1 cut(s) 485
MmeI TCCRAC 1 cut(s) 277
Mox20I TGGCCA 1 cut(s) 861
Mph1103I ATGCAT 1 cut(s) 1150
MscI TGGCCA 1 cut(s) 861
MseI TTAA 3 cut(s) 93, 645, 1299
MslI CAYNNNNRTG 2 cut(s) 1023, 1287
Msp20I TGGCCA 1 cut(s) 861
MspA1I CMGCKG 2 cut(s) 488, 548
MspR9I CCNGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
MunI CAATTG 1 cut(s) 516
MvaI CCWGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
MwoI GCNNNNNNNGC 3 cut(s) 818, 954, 1058
NdeII GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
NlaIII CATG 6 cut(s) 12, 150, 296, 695, 754, 1286
NlaIV GGNNCC 4 cut(s) 597, 711, 822, 868
NmuCI GTSAC 3 cut(s) 841, 884, 1109
NsiI ATGCAT 1 cut(s) 1150
NspI RCATGY 1 cut(s) 1286
PaqCI CACCTGC 1 cut(s) 1043
PciI ACATGT 1 cut(s) 1282
PfeI GAWTC 4 cut(s) 74, 191, 308, 1070
PflMI CCANNNNNTGG 2 cut(s) 275, 881
PfoI TCCNGGA 1 cut(s) 1204
PkrI GCNGC 5 cut(s) 506, 547, 942, 1177, 1260
PleI GAGTC 1 cut(s) 485
PpsI GAGTC 1 cut(s) 485
PscI ACATGT 1 cut(s) 1282
PshAI GACNNNNGTC 1 cut(s) 495
PshBI ATTAAT 1 cut(s) 645
Psp6I CCWGG 7 cut(s) 274, 705, 874, 997, 1003, 1204, 1231
PspFI CCCAGC 1 cut(s) 1261
PspGI CCWGG 7 cut(s) 274, 705, 874, 997, 1003, 1204, 1231
PspN4I GGNNCC 4 cut(s) 597, 711, 822, 868
PspPI GGNCC 2 cut(s) 595, 1001
PstI CTGCAG 1 cut(s) 547
PstNI CAGNNNCTG 3 cut(s) 311, 857, 881
PsuI RGATCY 4 cut(s) 125, 197, 481, 854
PvuII CAGCTG 2 cut(s) 488, 548
RsaI GTAC 3 cut(s) 304, 711, 975
RsaNI GTAC 3 cut(s) 303, 710, 974
RseI CAYNNNNRTG 2 cut(s) 1023, 1287
SaqAI TTAA 3 cut(s) 93, 645, 1299
SatI GCNGC 5 cut(s) 505, 546, 941, 1176, 1259
Sau3AI GATC 7 cut(s) 125, 179, 197, 338, 481, 577, 854
Sau96I GGNCC 2 cut(s) 595, 1001
SchI GAGTC 1 cut(s) 485
ScrFI CCNGG 7 cut(s) 276, 707, 876, 999, 1005, 1206, 1233
SduI GDGCHC 5 cut(s) 739, 823, 900, 1063, 1232
SfaNI GCATC 3 cut(s) 145, 558, 1157
SfcI CTRYAG 1 cut(s) 543
SmiMI CAYNNNNRTG 2 cut(s) 1023, 1287
SmlI CTYRAG 3 cut(s) 572, 607, 1009
SmoI CTYRAG 3 cut(s) 572, 607, 1009
Sse9I AATT 9 cut(s) 89, 516, 651, 774, 889, 901, 1014, 1137, 1168
SsiI CCGC 1 cut(s) 502
SspMI CTAG 5 cut(s) 188, 456, 537, 765, 978
StyD4I CCNGG 7 cut(s) 274, 705, 874, 997, 1003, 1204, 1231
TaaI ACNGT 3 cut(s) 592, 930, 1115
TaiI ACGT 1 cut(s) 304
TaqI TCGA 3 cut(s) 72, 139, 178
TasI AATT 9 cut(s) 89, 516, 651, 774, 889, 901, 1014, 1137, 1168
TfiI GAWTC 4 cut(s) 74, 191, 308, 1070
Tru1I TTAA 3 cut(s) 93, 645, 1299
Tru9I TTAA 3 cut(s) 93, 645, 1299
TscAI CASTG 2 cut(s) 568, 595
TseFI GTSAC 3 cut(s) 841, 884, 1109
TseI GCWGC 5 cut(s) 504, 545, 940, 1175, 1258
Tsp45I GTSAC 3 cut(s) 841, 884, 1109
TspGWI ACGGA 1 cut(s) 688
TspRI CASTG 2 cut(s) 568, 595
Van91I CCANNNNNTGG 2 cut(s) 275, 881
VspI ATTAAT 1 cut(s) 645
XagI CCTNNNNNAGG 2 cut(s) 717, 1002
XapI RAATTY 4 cut(s) 89, 651, 1014, 1168
XbaI TCTAGA 2 cut(s) 187, 764
XceI RCATGY 1 cut(s) 1286
XspI CTAG 5 cut(s) 188, 456, 537, 765, 978
Zsp2I ATGCAT 1 cut(s) 1150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.