Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001511

Physical Location & Seq

Genomic Coordinates Forward (+)

14807380 .. 14815583

Gene Structure 8204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG165400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGCCTTCGTGGTGGAGAAAGTCTTCATCCAAAGAAGTAAAGAAGAAAGCAAATAAGGAGAGTTTCATTGATACCATAATGACTATACACCGAAAACTTAAGAGTTCTTCTGAAGAAAAGTTTAACAGTAGTTCAGGGGGTTCTAGGAGACGATGTACTGACACCGTTTCAGAAATGGGTTCTCAATCCAGGGCTTTGTCACCATTAACATCGACACAAGTATCACGCTGTCAAAGTTTTGCAGAGAGGCCTCATGCCCAACCACTACCTCTTCCTAGAGTGCAACTTTCCAACATTGGGCGTTCTGACTCTGCTGTAACGGCATCATCAAAAACCGGGTCTGATACAGGGCCCAAGCAATTGCTCTATGTGCCCCTTTCAAGCCCTGGCCGTATCTTGAGCAGGGCAGTACCTGCAGATGCAGACGGTGATATAGCCACTGCTTCCATATCTAGTGATAGTTCTATTGATAGTGATGACCCACCTGATTCACGTCTCCTTAGTCCCATGGCCTCTGACTGCGAATATGGCACCAGAACAACTCTGAATAGTCCTTCCAGGGTAATGCAAAAGGACCAATTCCCTAATGTCAACCAAAAGAACACAAAAGAGACTTTGAAGCCGGCTAATCTTCTATTCAATAATCAGATTATGACCACATCACCAAAACGGGGACCTTCGACACATTTGCAGAACATACAAATTCCTTACAATGGTGCTTTCTCTAGTGCTCCAGACAGCTCCATGTCAAGTCCTTCTAGAAGTCCTATGAGAGTGTTTGGCTCTGATCAAGTTCTGATCTCCAGTTTCTGGGCAGGAAAGCCTTATCCCGATATAGCTTCTACCTACTGCTCCAGTCCAGGCTCAGGTCATAATTCCGGACATAATTCGGTCGGAGGGGATCTGTCAGCACAGCTTTTTTGGCAGCAGAACAGGTGTAGCCCCGAGTGTTCTCCAATACCTAGTCCCAGAATGACCAGTCCTGGCCCAAGCTCCAGAATGACCAGTCCTGGCCCCAGCTCCAGAATACAAAGTGCTGCAGTTACCCCTCTGCACCCACGAGCTGGAGGGCCAGCCATGGAGTCACCTACAAGCCGACCCGATGATGGGAAGCAGAAAAGCCACCGATTGCCACTTCCTCCAATAACAACAACTAGGACCTGTCCTTTTTCTCCTGCATATTCACCTGCAACAACTCCCACAGTTCCTCGCAGTCCTGGTAGGGCAGAAAATCCACAAAGTCCTGGTTCACGCTGGAAGAAGGGGCGCCTGCTTGGGAGGGGTACATTTGGACATGTGTATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTATTTGCAGATGATGCAAAGTCAAAGGAAAGTGCACAGCAGCTTGGGCAAGAAATTTCTTTGCTAAGTCGACTACGACATCCAAATATAGTGCAGTATTTAGGATCTGAGACGGTAGACGATAAACTCTACATATACTTGGAATATGTGTCTGGTGGATCCATCTATAAACTGCTTCAAGAGTACGGTCAGTTTGGTGAAATAGCAATTCGTAGTTATACTCAACAAATCTTGTCAGGGCTTTCGTACTTGCACGCGAAAAACACTCTCCACAGGGATATCAAAGGAGCAAATATATTAGTAGATCCCAATGGTCGGGTAAAGTTGGCAGATTTTGGGATGGCAAAGCATATTACTGGGGAGTCTTGTCCGTTATCCTTCAAGGGGAGCCCATATTGGATGGCACCAGAGGTTATCAAGAATTCAAATGGTTGTAATCTTGCGGTTGATATATGGAGCCTGGGTTGCACTGTTCTTGAGATGGCCACGACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCTGCTATGTTTAAGATAGGAAACAGCAAGGAACTTCCTGGAATTCCTGGACATCTTTCAGAGGATGGGAAGGACTTTGTTAGGCTGTGTTTGCAACGTAACCCACTGCATCGCCCTACAGCTGCTCAGCTTTTGGAGCATCCTTTTGTTAAGAATGTTGCTCCACTGGAAAGACCCATTATGAGTTTGGATCCTTCTGAAGGACCACCTGCGGTGACGGATGCAGTGAGATCTCAGGTAGACGCACTGATCTTAAAACAACAAGAAATAATTTTCACGCCATCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0001932 GO:0001934 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009893 GO:0009987 GO:0010016 GO:0010098 GO:0010103 GO:0010229 GO:0010374 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090698 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

721

Amino Acids

78.22

Weight (kDa)

9.2

Isoelectric Point (pI)

59.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	420 - 675	2.3e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	422 - 671	4.6e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63700 AT1G63700
fragaria_vesca	FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920
malus_domestica	MD01G1205500.v1.1 MD06G1085900.v1.1 MD07G1274900.v1.1
prunus_persica	Prupe.2G298100_v2.0.a1 Prupe.2G298100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1
pyrus_communis	pycom01g21500 pycom06g08220 pycom07g25100
rosa_chinensis	RchiOBHm_Chr1g0377881 RchiOBHm_Chr7g0197281
rosa_laevigata	RLG00000003944 RLG00000026489
rosa_multiflora	Rmu_co8459889.1_g000001 Rmu_sc0004491.1_g000001 Rmu_sc0004824.1_g000011 Rmu_sc0010019.1_g000003 Rmu_sc0017623.1_g000004 Rmu_sc0030897.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258510 Rroxscaffold_4G00280980
rosa_rugosa	Rorug01G0405400 Rorug07G0039200
rosa_samantha	Rh1AG426400 Rh1BG382900 Rh1CG396700 Rh1DG413900 Rh7AG164200 Rh7BG166000 Rh7CG172700 Rh7DG165400
rosa_wichuraiana	Rw1G037210 Rw7G014320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1195, 2092
Acc36I	ACCTGC	3 cut(s)	421, 1195, 2092
AccB1I	GGYRCC	3 cut(s)	530, 1266, 1756
AccB7I	CCANNNNNTGG	2 cut(s)	810, 1064
AccI	GTMKAC	3 cut(s)	1423, 1470, 2115
AccII	CGCG	1 cut(s)	1610
AccIII	TCCGGA	1 cut(s)	878
AciI	CCGC	2 cut(s)	1796, 2087
AclWI	GGATC	7 cut(s)	909, 1465, 1506, 1519, 1652, 2060, 2073
AcoI	YGGCCR	2 cut(s)	388, 1836
AcsI	RAATTY	4 cut(s)	702, 1407, 1774, 1917
AcuI	CTGAAG	2 cut(s)	132, 2094
AcyI	GRCGYC	1 cut(s)	1267
AfaI	GTAC	5 cut(s)	157, 411, 1285, 1538, 1601
AflII	CTTAAG	1 cut(s)	98
AflIII	ACRYGT	1 cut(s)	1294
AgsI	TTSAA	6 cut(s)	381, 619, 640, 1532, 1735, 1779
AjiI	CACGTC	1 cut(s)	494
AluBI	AGCT	9 cut(s)	741, 839, 916, 993, 1020, 1064, 1396, 1997, 2005
AluI	AGCT	9 cut(s)	741, 839, 916, 993, 1020, 1064, 1396, 1997, 2005
Alw21I	GWGCWC	2 cut(s)	733, 1390
Alw26I	GTCTC	4 cut(s)	142, 500, 605, 1457
Alw44I	GTGCAC	1 cut(s)	1386
AlwI	GGATC	7 cut(s)	909, 1465, 1506, 1519, 1652, 2060, 2073
AlwNI	CAGNNNCTG	2 cut(s)	413, 810
Ama87I	CYCGRG	1 cut(s)	944
Aor13HI	TCCGGA	1 cut(s)	878
AoxI	GGCC	8 cut(s)	248, 350, 388, 510, 985, 1012, 1070, 1836
ApaI	GGGCCC	1 cut(s)	354
ApaLI	GTGCAC	1 cut(s)	1386
ApeKI	GCWGC	5 cut(s)	925, 1037, 1393, 1877, 1997
ApoI	RAATTY	4 cut(s)	702, 1407, 1774, 1917
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
Asp700I	GAANNNNTTC	1 cut(s)	22
AspLEI	GCGC	1 cut(s)	1269
AspS9I	GGNCC	9 cut(s)	350, 351, 574, 674, 986, 1013, 1070, 1158, 2078
AsuC2I	CCSGG	1 cut(s)	337
AsuHPI	GGTGA	8 cut(s)	192, 440, 654, 1077, 1176, 1337, 1562, 2101
AvaI	CYCGRG	1 cut(s)	944
AvaII	GGWCC	4 cut(s)	574, 674, 1158, 2078
BaeGI	GKGCMC	3 cut(s)	354, 375, 1390
BaeI	ACNNNNGTAYC	4 cut(s)	204, 237, 1283, 1316
BalI	TGGCCA	1 cut(s)	1838
BamHI	GGATCC	2 cut(s)	1511, 2065
BanI	GGYRCC	3 cut(s)	530, 1266, 1756
BanII	GRGCYC	2 cut(s)	354, 1745
BauI	CACGAG	1 cut(s)	1059
BbsI	GAAGAC	1 cut(s)	15
Bbv12I	GWGCWC	2 cut(s)	733, 1390
BbvI	GCAGC	5 cut(s)	937, 1024, 1405, 1864, 1984
BccI	CCATC	7 cut(s)	1100, 1523, 1687, 1747, 1828, 1934, 2164
BceAI	ACGGC	2 cut(s)	336, 375
BcgI	CGANNNNNNTGC	2 cut(s)	670, 704
BclI	TGATCA	1 cut(s)	787
BcnI	CCSGG	1 cut(s)	337
BcoDI	GTCTC	4 cut(s)	142, 500, 605, 1457
BfaI	CTAG	7 cut(s)	144, 276, 453, 726, 759, 963, 1155
BfmI	CTRYAG	3 cut(s)	414, 1038, 1992
BfoI	RGCGCY	1 cut(s)	1270
BfrI	CTTAAG	1 cut(s)	98
BfuAI	ACCTGC	3 cut(s)	421, 1195, 2092
BglII	AGATCT	1 cut(s)	2105
BisI	GCNGC	5 cut(s)	926, 1038, 1394, 1878, 1998
BlpI	GCTNAGC	1 cut(s)	2001
BlsI	GCNGC	5 cut(s)	927, 1039, 1395, 1879, 1999
Bme18I	GGWCC	4 cut(s)	574, 674, 1158, 2078
BmeT110I	CYCGRG	1 cut(s)	944
BmgBI	CACGTC	1 cut(s)	494
BmgT120I	GGNCC	9 cut(s)	350, 351, 574, 674, 986, 1013, 1070, 1158, 2078
BmrI	ACTGGG	1 cut(s)	1719
BmsI	GCATC	6 cut(s)	332, 409, 1357, 1993, 2023, 2086
BmuI	ACTGGG	1 cut(s)	1719
BpiI	GAAGAC	1 cut(s)	15
BpmI	CTGGAG	6 cut(s)	717, 787, 838, 979, 1006, 1086
Bpu10I	CCTNAGC	1 cut(s)	865
Bpu1102I	GCTNAGC	1 cut(s)	2001
BpuEI	CTTGAG	2 cut(s)	418, 1850
BpuMI	CCSGG	1 cut(s)	337
BsaHI	GRCGYC	1 cut(s)	1267
BsaJI	CCNNGG	7 cut(s)	189, 385, 507, 558, 1077, 1813, 1853
BsaWI	WCCGGW	1 cut(s)	878
BsaXI	ACNNNNNCTCC	4 cut(s)	139, 169, 1801, 1831
Bse118I	RCCGGY	1 cut(s)	622
Bse1I	ACTGG	6 cut(s)	804, 855, 978, 1005, 1714, 2046
Bse3DI	GCAATG	1 cut(s)	1344
BseAI	TCCGGA	1 cut(s)	878
BseDI	CCNNGG	7 cut(s)	189, 385, 507, 558, 1077, 1813, 1853
BseGI	GGATG	7 cut(s)	26, 1432, 1698, 1758, 1945, 2014, 2101
BseMI	GCAATG	1 cut(s)	1344
BseMII	CTCAG	4 cut(s)	879, 1452, 2015, 2123
BseNI	ACTGG	6 cut(s)	804, 855, 978, 1005, 1714, 2046
BseSI	GKGCMC	3 cut(s)	354, 375, 1390
BseXI	GCAGC	5 cut(s)	937, 1024, 1405, 1864, 1984
BseYI	CCCAGC	1 cut(s)	1016
BsgI	GTGCAG	2 cut(s)	1037, 1466
Bsh1236I	CGCG	1 cut(s)	1610
Bsh1285I	CGRYCG	1 cut(s)	894
BshFI	GGCC	8 cut(s)	250, 352, 390, 512, 987, 1014, 1072, 1838
BshNI	GGYRCC	3 cut(s)	530, 1266, 1756
BsiEI	CGRYCG	1 cut(s)	894
BsiHKAI	GWGCWC	2 cut(s)	733, 1390
BsiHKCI	CYCGRG	1 cut(s)	944
BsiSI	CCGG	3 cut(s)	336, 623, 879
BslFI	GGGAC	3 cut(s)	489, 687, 951
BsmAI	GTCTC	4 cut(s)	142, 500, 605, 1457
BsmBI	CGTCTC	3 cut(s)	142, 500, 1457
BsmFI	GGGAC	3 cut(s)	489, 687, 951
BsnI	GGCC	8 cut(s)	250, 352, 390, 512, 987, 1014, 1072, 1838
BsoBI	CYCGRG	1 cut(s)	944
Bsp120I	GGGCCC	1 cut(s)	350
Bsp1286I	GDGCHC	5 cut(s)	354, 375, 733, 1390, 1745
Bsp13I	TCCGGA	1 cut(s)	878
Bsp143I	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
Bsp1720I	GCTNAGC	1 cut(s)	2001
Bsp19I	CCATGG	2 cut(s)	507, 1077
BspACI	CCGC	2 cut(s)	1796, 2087
BspANI	GGCC	8 cut(s)	250, 352, 390, 512, 987, 1014, 1072, 1838
BspCNI	CTCAG	4 cut(s)	878, 1453, 2014, 2122
BspEI	TCCGGA	1 cut(s)	878
BspFNI	CGCG	1 cut(s)	1610
BspMAI	CTGCAG	2 cut(s)	418, 1042
BspMI	ACCTGC	3 cut(s)	421, 1195, 2092
BspPI	GGATC	7 cut(s)	909, 1465, 1506, 1519, 1652, 2060, 2073
BspT107I	GGYRCC	3 cut(s)	530, 1266, 1756
BspTI	CTTAAG	1 cut(s)	98
BsrDI	GCAATG	1 cut(s)	1344
BsrFI	RCCGGY	1 cut(s)	622
BsrI	ACTGG	6 cut(s)	804, 855, 978, 1005, 1714, 2046
BssAI	RCCGGY	1 cut(s)	622
BssECI	CCNNGG	7 cut(s)	189, 385, 507, 558, 1077, 1813, 1853
BssMI	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
BssNI	GRCGYC	1 cut(s)	1267
BssSI	CACGAG	1 cut(s)	1059
BssT1I	CCWWGG	3 cut(s)	507, 1077, 1853
Bst2BI	CACGAG	1 cut(s)	1059
Bst4CI	ACNGT	8 cut(s)	128, 166, 428, 1204, 1316, 1468, 1541, 1825
Bst6I	CTCTTC	1 cut(s)	276
BstACI	GRCGYC	1 cut(s)	1267
BstAFI	CTTAAG	1 cut(s)	98
BstAPI	GCANNNNNTGC	2 cut(s)	413, 1367
BstC8I	GCNNGC	4 cut(s)	624, 1074, 1271, 1608
BstDEI	CTNAG	6 cut(s)	500, 865, 1418, 1461, 2001, 2109
BstDSI	CCRYGG	2 cut(s)	507, 1077
BstENI	CCTNNNNNAGG	1 cut(s)	2073
BstF5I	GGATG	7 cut(s)	26, 1432, 1698, 1758, 1945, 2014, 2101
BstFNI	CGCG	1 cut(s)	1610
BstH2I	RGCGCY	1 cut(s)	1270
BstHHI	GCGC	1 cut(s)	1269
BstKTI	GATC	9 cut(s)	790, 801, 904, 1460, 1514, 1660, 2068, 2108, 2127
BstMAI	GTCTC	4 cut(s)	142, 500, 605, 1457
BstMBI	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
BstMCI	CGRYCG	1 cut(s)	894
BstNSI	RCATGY	1 cut(s)	1298
BstSFI	CTRYAG	3 cut(s)	414, 1038, 1992
BstSLI	GKGCMC	3 cut(s)	354, 375, 1390
BstUI	CGCG	1 cut(s)	1610
BstV1I	GCAGC	5 cut(s)	937, 1024, 1405, 1864, 1984
BstV2I	GAAGAC	1 cut(s)	15
BstX2I	RGATCY	6 cut(s)	901, 1457, 1511, 1657, 2065, 2105
BstYI	RGATCY	6 cut(s)	901, 1457, 1511, 1657, 2065, 2105
BsuRI	GGCC	8 cut(s)	250, 352, 390, 512, 987, 1014, 1072, 1838
BtgI	CCRYGG	2 cut(s)	507, 1077
BtgZI	GCGATG	1 cut(s)	1970
BtrI	CACGTC	1 cut(s)	494
BtsCI	GGATG	7 cut(s)	26, 1432, 1698, 1758, 1945, 2014, 2101
BtsI	GCAGTG	3 cut(s)	438, 1979, 2106
BtsIMutI	CAGTG	7 cut(s)	438, 1321, 1821, 1979, 2039, 2106, 2120
BveI	ACCTGC	3 cut(s)	421, 1195, 2092
Cac8I	GCNNGC	4 cut(s)	624, 1074, 1271, 1608
CaiI	CAGNNNCTG	2 cut(s)	413, 810
CfoI	GCGC	1 cut(s)	1269
Cfr10I	RCCGGY	1 cut(s)	622
Cfr13I	GGNCC	9 cut(s)	350, 351, 574, 674, 986, 1013, 1070, 1158, 2078
CseI	GACGC	1 cut(s)	2126
Csp6I	GTAC	5 cut(s)	156, 410, 1284, 1537, 1600
CviAII	CATG	5 cut(s)	254, 508, 745, 1078, 1295
CviQI	GTAC	5 cut(s)	156, 410, 1284, 1537, 1600
DdeI	CTNAG	6 cut(s)	500, 865, 1418, 1461, 2001, 2109
DinI	GGCGCC	1 cut(s)	1268
DpnI	GATC	9 cut(s)	789, 800, 903, 1459, 1513, 1659, 2067, 2107, 2126
DpnII	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
EaeI	YGGCCR	2 cut(s)	388, 1836
Eam1104I	CTCTTC	1 cut(s)	276
EarI	CTCTTC	1 cut(s)	276
Eco130I	CCWWGG	3 cut(s)	507, 1077, 1853
Eco147I	AGGCCT	1 cut(s)	250
Eco24I	GRGCYC	2 cut(s)	354, 1745
Eco32I	GATATC	1 cut(s)	1633
Eco47I	GGWCC	4 cut(s)	574, 674, 1158, 2078
Eco57I	CTGAAG	2 cut(s)	132, 2094
Eco88I	CYCGRG	1 cut(s)	944
EcoNI	CCTNNNNNAGG	1 cut(s)	2073
EcoO109I	RGGNCCY	3 cut(s)	350, 674, 1158
EcoRI	GAATTC	2 cut(s)	1774, 1917
EcoRV	GATATC	1 cut(s)	1633
EcoT14I	CCWWGG	3 cut(s)	507, 1077, 1853
EcoT38I	GRGCYC	2 cut(s)	354, 1745
EgeI	GGCGCC	1 cut(s)	1268
EheI	GGCGCC	1 cut(s)	1268
ErhI	CCWWGG	3 cut(s)	507, 1077, 1853
Esp3I	CGTCTC	3 cut(s)	142, 500, 1457
FaeI	CATG	5 cut(s)	257, 511, 748, 1081, 1298
FaqI	GGGAC	3 cut(s)	489, 687, 951
FatI	CATG	5 cut(s)	253, 507, 744, 1077, 1294
FbaI	TGATCA	1 cut(s)	787
FblI	GTMKAC	3 cut(s)	1423, 1470, 2115
Fnu4HI	GCNGC	5 cut(s)	926, 1038, 1394, 1878, 1998
FokI	GGATG	7 cut(s)	13, 1419, 1705, 1765, 1952, 2001, 2108
FriOI	GRGCYC	2 cut(s)	354, 1745
Fsp4HI	GCNGC	5 cut(s)	926, 1038, 1394, 1878, 1998
FspBI	CTAG	7 cut(s)	144, 276, 453, 726, 759, 963, 1155
GlaI	GCGC	1 cut(s)	1268
GluI	GCNGC	5 cut(s)	926, 1038, 1394, 1878, 1998
GsaI	CCCAGC	1 cut(s)	1020
GsuI	CTGGAG	6 cut(s)	717, 787, 838, 979, 1006, 1086
HaeII	RGCGCY	1 cut(s)	1270
HaeIII	GGCC	8 cut(s)	250, 352, 390, 512, 987, 1014, 1072, 1838
HapII	CCGG	3 cut(s)	336, 623, 879
HgaI	GACGC	1 cut(s)	2126
HhaI	GCGC	1 cut(s)	1269
Hin1I	GRCGYC	1 cut(s)	1267
Hin1II	CATG	5 cut(s)	257, 511, 748, 1081, 1298
Hin6I	GCGC	1 cut(s)	1267
HinP1I	GCGC	1 cut(s)	1267
HincII	GTYRAC	2 cut(s)	592, 1424
HindII	GTYRAC	2 cut(s)	592, 1424
HinfI	GANTC	4 cut(s)	308, 488, 1082, 1715
HpaII	CCGG	3 cut(s)	336, 623, 879
HphI	GGTGA	8 cut(s)	192, 440, 654, 1077, 1176, 1337, 1562, 2101
Hpy166II	GTNNAC	6 cut(s)	592, 1250, 1388, 1424, 1471, 2116
Hpy8I	GTNNAC	6 cut(s)	592, 1250, 1388, 1424, 1471, 2116
HpyCH4III	ACNGT	8 cut(s)	128, 166, 428, 1204, 1316, 1468, 1541, 1825
HpyCH4IV	ACGT	2 cut(s)	493, 1972
HpyF3I	CTNAG	6 cut(s)	500, 865, 1418, 1461, 2001, 2109
HpySE526I	ACGT	2 cut(s)	493, 1972
Hsp92I	GRCGYC	1 cut(s)	1267
Hsp92II	CATG	5 cut(s)	257, 511, 748, 1081, 1298
HspAI	GCGC	1 cut(s)	1267
KasI	GGCGCC	1 cut(s)	1266
Kpn2I	TCCGGA	1 cut(s)	878
KroI	GCCGGC	1 cut(s)	622
KroNI	GCCGGC	1 cut(s)	624
Ksp22I	TGATCA	1 cut(s)	787
Kzo9I	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
Lsp1109I	GCAGC	5 cut(s)	937, 1024, 1405, 1864, 1984
LweI	GCATC	6 cut(s)	332, 409, 1357, 1993, 2023, 2086
MaeI	CTAG	7 cut(s)	144, 276, 453, 726, 759, 963, 1155
MaeII	ACGT	2 cut(s)	493, 1972
MaeIII	GTNAC	7 cut(s)	198, 316, 1042, 1083, 1348, 1973, 2089
MalI	GATC	9 cut(s)	789, 800, 903, 1459, 1513, 1659, 2067, 2107, 2126
MboI	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
MboII	GAAGA	7 cut(s)	15, 55, 99, 125, 263, 623, 1270
MfeI	CAATTG	1 cut(s)	359
MflI	RGATCY	6 cut(s)	901, 1457, 1511, 1657, 2065, 2105
MhlI	GDGCHC	5 cut(s)	354, 375, 733, 1390, 1745
MlsI	TGGCCA	1 cut(s)	1838
MluNI	TGGCCA	1 cut(s)	1838
Mly113I	GGCGCC	1 cut(s)	1267
MlyI	GAGTC	3 cut(s)	302, 1091, 1724
MmeI	TCCRAC	2 cut(s)	315, 874
Mox20I	TGGCCA	1 cut(s)	1838
MroI	TCCGGA	1 cut(s)	878
MroNI	GCCGGC	1 cut(s)	622
MroXI	GAANNNNTTC	1 cut(s)	22
MscI	TGGCCA	1 cut(s)	1838
MseI	TTAA	7 cut(s)	99, 123, 206, 1311, 1887, 2025, 2129
Msp20I	TGGCCA	1 cut(s)	1838
MspA1I	CMGCKG	1 cut(s)	1997
MspCI	CTTAAG	1 cut(s)	98
MspI	CCGG	3 cut(s)	336, 623, 879
MunI	CAATTG	1 cut(s)	359
MvnI	CGCG	1 cut(s)	1610
NaeI	GCCGGC	1 cut(s)	624
NarI	GGCGCC	1 cut(s)	1267
NciI	CCSGG	1 cut(s)	337
NcoI	CCATGG	2 cut(s)	507, 1077
NdeII	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
NgoMIV	GCCGGC	1 cut(s)	622
NlaIII	CATG	5 cut(s)	257, 511, 748, 1081, 1298
NmuCI	GTSAC	3 cut(s)	198, 1083, 2089
NspI	RCATGY	1 cut(s)	1298
PaqCI	CACCTGC	2 cut(s)	1195, 2092
PceI	AGGCCT	1 cut(s)	250
PciI	ACATGT	1 cut(s)	1294
PdiI	GCCGGC	1 cut(s)	624
PdmI	GAANNNNTTC	1 cut(s)	22
PfeI	GAWTC	1 cut(s)	488
PflMI	CCANNNNNTGG	2 cut(s)	810, 1064
PfoI	TCCNGGA	2 cut(s)	1912, 1921
PkrI	GCNGC	5 cut(s)	927, 1039, 1395, 1879, 1999
PleI	GAGTC	3 cut(s)	302, 1090, 1723
PluTI	GGCGCC	1 cut(s)	1270
PpsI	GAGTC	3 cut(s)	302, 1090, 1723
PpuMI	RGGWCCY	2 cut(s)	674, 1158
PscI	ACATGT	1 cut(s)	1294
Psp5II	RGGWCCY	2 cut(s)	674, 1158
PspFI	CCCAGC	1 cut(s)	1016
PspOMI	GGGCCC	1 cut(s)	350
PspPI	GGNCC	9 cut(s)	350, 351, 574, 674, 986, 1013, 1070, 1158, 2078
PspPPI	RGGWCCY	2 cut(s)	674, 1158
PstI	CTGCAG	2 cut(s)	418, 1042
PstNI	CAGNNNCTG	2 cut(s)	413, 810
PsuI	RGATCY	6 cut(s)	901, 1457, 1511, 1657, 2065, 2105
PvuII	CAGCTG	1 cut(s)	1997
RsaI	GTAC	5 cut(s)	157, 411, 1285, 1538, 1601
RsaNI	GTAC	5 cut(s)	156, 410, 1284, 1537, 1600
SalI	GTCGAC	1 cut(s)	1422
SaqAI	TTAA	7 cut(s)	99, 123, 206, 1311, 1887, 2025, 2129
SatI	GCNGC	5 cut(s)	926, 1038, 1394, 1878, 1998
Sau3AI	GATC	9 cut(s)	787, 798, 901, 1457, 1511, 1657, 2065, 2105, 2124
Sau96I	GGNCC	9 cut(s)	350, 351, 574, 674, 986, 1013, 1070, 1158, 2078
SchI	GAGTC	3 cut(s)	302, 1091, 1724
SduI	GDGCHC	5 cut(s)	354, 375, 733, 1390, 1745
SfaNI	GCATC	6 cut(s)	332, 409, 1357, 1993, 2023, 2086
SfcI	CTRYAG	3 cut(s)	414, 1038, 1992
SfoI	GGCGCC	1 cut(s)	1268
SinI	GGWCC	4 cut(s)	574, 674, 1158, 2078
SmlI	CTYRAG	3 cut(s)	98, 397, 1829
SmoI	CTYRAG	3 cut(s)	98, 397, 1829
SseBI	AGGCCT	1 cut(s)	250
SsiI	CCGC	2 cut(s)	1796, 2087
SspDI	GGCGCC	1 cut(s)	1266
SspMI	CTAG	7 cut(s)	144, 276, 453, 726, 759, 963, 1155
StuI	AGGCCT	1 cut(s)	250
StyI	CCWWGG	3 cut(s)	507, 1077, 1853
TaaI	ACNGT	8 cut(s)	128, 166, 428, 1204, 1316, 1468, 1541, 1825
TaiI	ACGT	2 cut(s)	496, 1975
TaqI	TCGA	3 cut(s)	212, 680, 1423
TaqII	GACCGA	1 cut(s)	880
TatI	WGTACW	1 cut(s)	155
TfiI	GAWTC	1 cut(s)	488
Tru1I	TTAA	7 cut(s)	99, 123, 206, 1311, 1887, 2025, 2129
Tru9I	TTAA	7 cut(s)	99, 123, 206, 1311, 1887, 2025, 2129
TscAI	CASTG	7 cut(s)	445, 1321, 1828, 1986, 2046, 2106, 2127
TseFI	GTSAC	3 cut(s)	198, 1083, 2089
TseI	GCWGC	5 cut(s)	925, 1037, 1393, 1877, 1997
Tsp45I	GTSAC	3 cut(s)	198, 1083, 2089
TspDTI	ATGAA	4 cut(s)	15, 55, 1355, 1881
TspGWI	ACGGA	2 cut(s)	1713, 2108
TspRI	CASTG	7 cut(s)	445, 1321, 1828, 1986, 2046, 2106, 2127
Van91I	CCANNNNNTGG	2 cut(s)	810, 1064
Vha464I	CTTAAG	1 cut(s)	98
VneI	GTGCAC	1 cut(s)	1386
VpaK11BI	GGWCC	4 cut(s)	574, 674, 1158, 2078
XagI	CCTNNNNNAGG	1 cut(s)	2073
XapI	RAATTY	4 cut(s)	702, 1407, 1774, 1917
XbaI	TCTAGA	1 cut(s)	758
XceI	RCATGY	1 cut(s)	1298
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2059
XmiI	GTMKAC	3 cut(s)	1423, 1470, 2115
XmnI	GAANNNNTTC	1 cut(s)	22
XspI	CTAG	7 cut(s)	144, 276, 453, 726, 759, 963, 1155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.