Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0001511

Physical Location & Seq

Genomic Coordinates Forward (+)

65510701 .. 65515264

Gene Structure 4564 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG426400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGAGAAATATGCCTTCATGGTGGGGGAAGTCGTCATCCAAAGAAGCAAAGAAGAAGTCAGGGAGCAAGGAAAGTTTCATCGATTCATTACATCGGAAATTTAAGTTTTCATCTGAAAGTAGAGTGAATGGTAGATCTGGAGGGTCTCGAAGACCATGTAGTGATGCCATTTCGGAAAAGGGGTCTCGATCTCCTCTAGAATCAAGATCTCCTTCACCCTCCAAACAAGTTGCAAGAACTCAAAGTTTTGCTGAAAGGAGTATTTCTCAACCACTTCCACTTCCTGGTCAACATCCTGCTCATGTCGGACGTACAGATTCTGGTTTTAGTATATCACCAAAACCAAGATCAGATAAATGCTCCAAGCCATTATTGTTTCTACCTCTCCCGAGACCTCGGTGCATTGGTGGGAGGTCAAATCGTGCTGACTTTGATGATGGAGATATGAATACTGGTTCAGTTTCTAGTGATACCTCTGTTGATAGTGAAGATCCAGCTGACTCAGGTCTCCGCAGCCCTCAGGCAATTGACTATGAAAGTGGGACTAGAACTGCAGCTGGCAGTCCTTCCAGTGTGATGCTCAAGGATCAGTCCTTCACTGTGGCCCCAGTAATCTCAAGAGAGGCAAAAAAACCAGCCAACATTTCATTCATTAATCAAATTTCCCCTTCATCGCCTAAACGGAGACCTTTGAGCAGTCATGTGCCAAATCTCCAGGTACCTTATCAAGGAGCTTTCTGGAGTGCTCCTGACAGCTCCATGTCAAGTCCTTCTAGAAGTCCAATTAGAGCATTTGGAACCGAGCAAGCCGTGAACTCTGCTTTCTGGGCTCCAAAAACTTATACTGATGTCACCATAGCAGGATCTGGCCACGGCTCCAGTCCAGGTTCTGGTCACAATTCTGGGCACAATTCAATGGGAGGGGATATGTCGGGACAGTTGTTTTGGCAGCAAAGCAAGGGTAGCCCCGAGTATTCTCCAGTACCTAGTCCCAGATTGACAAGCCCTGGCCCAGGCTCAAGAATTCATAGTGGTGCTGTTACACCTATTCATCCCAGAGCAGGTGGGGCTCTCAATGATTCGCAGACAAGCTGGCCTGATGATGGGAAACAACAAAGTCACCGTTTGCCTCTTCCTCCAGTAACAATTTCAAATGCATCACCCTTTTCTCATTCAAATTCAGCAGCAACATCTCCTTCTGTGCCACGAAGTCCTGGAAGGGCAGAAAATCCAGCGAGCCCTGGTTCTCGGTGGAAAAAGGGGAAGCTGCTGGGTAGAGGCACATTTGGACATGTTTATGTCGGTTTTAATAGGGATATAAAAGGAGCAAACATACTTGTAGACCCAAATGGCCGTGTCAAGTTGGCGGACTTTGGGATGGCAAAGCATATTACCGGGCAGTCATGTCCTTTATCATTTAAGGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAGAACTCAAGTGGAGCCAACCTTGCTGTGGATATATGGAGTCTTGGGTGCACGGTTTTGGAAATGGCTACAACAAAACCACCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGGAATAGCAAGGAACTGCCAGCAATTCCAGATCACCTCTTGGATGATGGAAAGGATTTCATAAGGCAATGCTTACAGCGAAATCCACTTCATCGTCCTACAGCTGCTCAGCTCTTGGAGCATCCGTTTGTGAAATATGCAGCACCTTTGGCAAGACCTATATTGGGCCCTGAGCCTTCTGATTCACCTGCTGGGGTTGCAAATGGAGTGAAGGCTCTGGGCATTGGGCAATCAAGAAATTTCTCCAATTTGGATTCAGATAGGCTTGCAATTCACTCATCTAGAGTTTCAAAAACTCATCACCATACCAGTGATCTCCATATTCCAAGGAACATATCATGCCCTGTATCACCCATCGGAAGCCCTCTATTGCACTCCAGGTCACCACCACACTTAAATGGAAGAATGTCACCGTCTCCTATATCTAGCCCGCGGACCACTTCGGGCTCATCCACGCCTCTCACTGGTGGCAGCGGTGCCATTCCATTTATTCACCTAAAACAGTCCATAAATTTGCAAGAGGGTTTCGGAGGCATTTCAAATCCCTCAAATGGTCTCTATGGTAATGGCCCCTCCTATCATGATTCATCTCCTGACATGTTTCGAGGGAAGCAACCAGGGTCTCCCATCTTCTCAGAATTAATGCCCTCTGAAAATGATGTTCTTGCAAAACAGTTTGTAAGGCCCGCGCATACAGAGCAGTACAATGGACAGTCAGTTTTGGCTGATCGTGTGTCTCGCCAACTCCTCAAGGATCATGTTAAGATGAACAGACTGGATTTAAGTCCAAAGTCTCCTTTGACTGGCCGGACAAATGGTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

800

Amino Acids

85.48

Weight (kDa)

9.91

Isoelectric Point (pI)

69.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	438 - 570	2.4e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	438 - 566	8.4e-20	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63700 AT1G63700
fragaria_vesca	FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920
malus_domestica	MD01G1205500.v1.1 MD06G1085900.v1.1 MD07G1274900.v1.1
prunus_persica	Prupe.2G298100_v2.0.a1 Prupe.2G298100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1
pyrus_communis	pycom01g21500 pycom06g08220 pycom07g25100
rosa_chinensis	RchiOBHm_Chr1g0377881 RchiOBHm_Chr7g0197281
rosa_laevigata	RLG00000003944 RLG00000026489
rosa_multiflora	Rmu_co8459889.1_g000001 Rmu_sc0004491.1_g000001 Rmu_sc0004824.1_g000011 Rmu_sc0010019.1_g000003 Rmu_sc0017623.1_g000004 Rmu_sc0030897.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258510 Rroxscaffold_4G00280980
rosa_rugosa	Rorug01G0405400 Rorug07G0039200
rosa_samantha	Rh1AG426400 Rh1BG382900 Rh1CG396700 Rh1DG413900 Rh7AG164200 Rh7BG166000 Rh7CG172700 Rh7DG165400
rosa_wichuraiana	Rw1G037210 Rw7G014320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1454
AarI	CACCTGC	2 cut(s)	1052, 1774
Acc36I	ACCTGC	2 cut(s)	1052, 1774
Acc65I	GGTACC	1 cut(s)	718
AccB1I	GGYRCC	3 cut(s)	718, 1441, 2054
AccB7I	CCANNNNNTGG	2 cut(s)	284, 890
AccI	GTMKAC	1 cut(s)	1341
AccII	CGCG	2 cut(s)	2011, 2267
AciI	CCGC	6 cut(s)	511, 1367, 2009, 2011, 2052, 2265
AclWI	GGATC	4 cut(s)	485, 594, 871, 2340
AcoI	YGGCCR	3 cut(s)	868, 1351, 2383
AcsI	RAATTY	6 cut(s)	98, 660, 1023, 1177, 1816, 2089
AfaI	GTAC	4 cut(s)	313, 720, 984, 2282
AflIII	ACRYGT	2 cut(s)	1291, 2175
AgsI	TTSAA	5 cut(s)	915, 1152, 1176, 1869, 2118
AjnI	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 1955, 2194
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
AluBI	AGCT	8 cut(s)	497, 557, 734, 756, 1092, 1267, 1682, 1690
AluI	AGCT	8 cut(s)	497, 557, 734, 756, 1092, 1267, 1682, 1690
Alw21I	GWGCWC	2 cut(s)	748, 1508
Alw44I	GTGCAC	1 cut(s)	1504
AlwI	GGATC	4 cut(s)	485, 594, 871, 2340
AlwNI	CAGNNNCTG	3 cut(s)	320, 866, 890
Ama87I	CYCGRG	2 cut(s)	388, 968
AoxI	GGCC	9 cut(s)	603, 868, 1009, 1094, 1351, 1744, 2146, 2261, 2383
ApaI	GGGCCC	1 cut(s)	1748
ApaLI	GTGCAC	1 cut(s)	1504
ApeKI	GCWGC	9 cut(s)	513, 554, 949, 1184, 1267, 1562, 1682, 1718, 2049
ApoI	RAATTY	6 cut(s)	98, 660, 1023, 1177, 1816, 2089
ArsI	GACNNNNNNTTYG	4 cut(s)	41, 73, 927, 959
AseI	ATTAAT	2 cut(s)	654, 2219
Asp718I	GGTACC	1 cut(s)	718
AspLEI	GCGC	1 cut(s)	2269
AspS9I	GGNCC	7 cut(s)	604, 1010, 1744, 1745, 2013, 2147, 2262
AsuC2I	CCSGG	1 cut(s)	1396
AvaI	CYCGRG	2 cut(s)	388, 968
AvaII	GGWCC	1 cut(s)	2013
AxyI	CCTNAGG	2 cut(s)	519, 1446
BaeGI	GKGCMC	3 cut(s)	909, 1508, 1748
BaeI	ACNNNNGTAYC	2 cut(s)	462, 495
BalI	TGGCCA	1 cut(s)	870
BanI	GGYRCC	3 cut(s)	718, 1441, 2054
BanII	GRGCYC	5 cut(s)	832, 1072, 1241, 1748, 2027
BbsI	GAAGAC	1 cut(s)	157
Bbv12I	GWGCWC	2 cut(s)	748, 1508
BbvI	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1549, 1669, 1730, 2061
BccI	CCATC	7 cut(s)	431, 1097, 1372, 1432, 1619, 1940, 2213
BceAI	ACGGC	3 cut(s)	794, 889, 1338
BciT130I	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 1957, 2196
BcnI	CCSGG	1 cut(s)	1396
BfaI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 1860, 2004
BfmI	CTRYAG	2 cut(s)	552, 1677
BfuAI	ACCTGC	2 cut(s)	1052, 1774
BglII	AGATCT	2 cut(s)	134, 206
BisI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1563, 1683, 1719, 2050
BlpI	GCTNAGC	1 cut(s)	1686
BlsI	GCNGC	9 cut(s)	515, 556, 951, 1186, 1269, 1564, 1684, 1720, 2051
Bme18I	GGWCC	1 cut(s)	2013
BmeT110I	CYCGRG	2 cut(s)	388, 968
BmgT120I	GGNCC	7 cut(s)	604, 1010, 1744, 1745, 2013, 2147, 2262
BmrI	ACTGGG	1 cut(s)	602
BmsI	GCATC	4 cut(s)	154, 567, 1166, 1708
BmuI	ACTGGG	1 cut(s)	602
BoxI	GACNNNNGTC	1 cut(s)	504
BpiI	GAAGAC	1 cut(s)	157
BplI	GAGNNNNNCTC	2 cut(s)	250, 282
BpmI	CTGGAG	7 cut(s)	159, 698, 760, 862, 963, 1122, 1939
Bpu10I	CCTNAGC	1 cut(s)	1749
Bpu1102I	GCTNAGC	1 cut(s)	1686
BpuEI	CTTGAG	5 cut(s)	566, 601, 1003, 1447, 2312
BpuMI	CCSGG	1 cut(s)	1396
Bsa29I	ATCGAT	1 cut(s)	81
BsaI	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2138, 2205
BsaJI	CCNNGG	9 cut(s)	395, 871, 1006, 1012, 1240, 1538, 1904, 2009, 2195
BsaXI	ACNNNNNCTCC	2 cut(s)	1688, 1718
Bse21I	CCTNAGG	2 cut(s)	519, 1446
Bse3DI	GCAATG	1 cut(s)	1652
BseBI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 1957, 2196
BseCI	ATCGAT	1 cut(s)	81
BseDI	CCNNGG	9 cut(s)	395, 871, 1006, 1012, 1240, 1538, 1904, 2009, 2195
BseGI	GGATG	8 cut(s)	35, 292, 1051, 1383, 1443, 1627, 1699, 2027
BseMI	GCAATG	1 cut(s)	1652
BseMII	CTCAG	6 cut(s)	516, 533, 1437, 1700, 1740, 2226
BseRI	GAGGAG	2 cut(s)	183, 2315
BseSI	GKGCMC	3 cut(s)	909, 1508, 1748
BseXI	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1549, 1669, 1730, 2061
BseYI	CCCAGC	2 cut(s)	1270, 1769
Bsh1236I	CGCG	2 cut(s)	2011, 2267
BshFI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1353, 1746, 2148, 2263, 2385
BshNI	GGYRCC	3 cut(s)	718, 1441, 2054
BshVI	ATCGAT	1 cut(s)	81
BsiHKAI	GWGCWC	2 cut(s)	748, 1508
BsiHKCI	CYCGRG	2 cut(s)	388, 968
BsiSI	CCGG	2 cut(s)	1395, 2386
BslFI	GGGAC	3 cut(s)	556, 948, 975
BsmBI	CGTCTC	1 cut(s)	1998
BsmFI	GGGAC	3 cut(s)	556, 948, 975
BsnI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1353, 1746, 2148, 2263, 2385
Bso31I	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2138, 2205
BsoBI	CYCGRG	2 cut(s)	388, 968
Bsp120I	GGGCCC	1 cut(s)	1744
Bsp1286I	GDGCHC	8 cut(s)	748, 832, 909, 1072, 1241, 1508, 1748, 2027
Bsp1720I	GCTNAGC	1 cut(s)	1686
BspACI	CCGC	6 cut(s)	511, 1367, 2009, 2011, 2052, 2265
BspANI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1353, 1746, 2148, 2263, 2385
BspCNI	CTCAG	6 cut(s)	515, 532, 1438, 1699, 1741, 2225
BspDI	ATCGAT	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	2011, 2267
BspHI	TCATGA	1 cut(s)	2158
BspMAI	CTGCAG	1 cut(s)	556
BspMI	ACCTGC	2 cut(s)	1052, 1774
BspPI	GGATC	4 cut(s)	485, 594, 871, 2340
BspT107I	GGYRCC	3 cut(s)	718, 1441, 2054
BspTNI	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2138, 2205
BsrDI	GCAATG	1 cut(s)	1652
BssECI	CCNNGG	9 cut(s)	395, 871, 1006, 1012, 1240, 1538, 1904, 2009, 2195
BssT1I	CCWWGG	2 cut(s)	1538, 1904
Bst2UI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 1957, 2196
Bst4CI	ACNGT	8 cut(s)	601, 939, 1124, 1510, 1992, 2082, 2253, 2292
Bst6I	CTCTTC	1 cut(s)	1137
BstC8I	GCNNGC	8 cut(s)	559, 807, 1094, 1237, 1599, 1845, 2009, 2265
BstDEI	CTNAG	6 cut(s)	502, 519, 1446, 1686, 1749, 2212
BstDSI	CCRYGG	2 cut(s)	871, 2009
BstEII	GGTNACC	1 cut(s)	1959
BstENI	CCTNNNNNAGG	2 cut(s)	726, 1011
BstF5I	GGATG	8 cut(s)	35, 292, 1051, 1383, 1443, 1627, 1699, 2027
BstFNI	CGCG	2 cut(s)	2011, 2267
BstHHI	GCGC	1 cut(s)	2269
BstMWI	GCNNNNNNNGC	8 cut(s)	827, 963, 1067, 1478, 1696, 1727, 1775, 2275
BstNI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 1957, 2196
BstNSI	RCATGY	2 cut(s)	1295, 2179
BstPAI	GACNNNNGTC	1 cut(s)	504
BstPI	GGTNACC	1 cut(s)	1959
BstSFI	CTRYAG	2 cut(s)	552, 1677
BstSLI	GKGCMC	3 cut(s)	909, 1508, 1748
BstUI	CGCG	2 cut(s)	2011, 2267
BstV1I	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1549, 1669, 1730, 2061
BstV2I	GAAGAC	1 cut(s)	157
BstX2I	RGATCY	4 cut(s)	134, 206, 490, 863
BstYI	RGATCY	4 cut(s)	134, 206, 490, 863
Bsu15I	ATCGAT	1 cut(s)	81
Bsu36I	CCTNAGG	2 cut(s)	519, 1446
BsuRI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1353, 1746, 2148, 2263, 2385
BsuTUI	ATCGAT	1 cut(s)	81
BtgI	CCRYGG	2 cut(s)	871, 2009
BtgZI	GCGATG	1 cut(s)	657
BtsCI	GGATG	8 cut(s)	35, 292, 1051, 1383, 1443, 1627, 1699, 2027
BtsIMutI	CAGTG	4 cut(s)	577, 597, 1894, 2040
BveI	ACCTGC	2 cut(s)	1052, 1774
Cac8I	GCNNGC	8 cut(s)	559, 807, 1094, 1237, 1599, 1845, 2009, 2265
CaiI	CAGNNNCTG	3 cut(s)	320, 866, 890
CciI	TCATGA	1 cut(s)	2158
CfoI	GCGC	1 cut(s)	2269
Cfr13I	GGNCC	7 cut(s)	604, 1010, 1744, 1745, 2013, 2147, 2262
Cfr42I	CCGCGG	1 cut(s)	2012
ClaI	ATCGAT	1 cut(s)	81
Csp6I	GTAC	4 cut(s)	312, 719, 983, 2281
CviQI	GTAC	4 cut(s)	312, 719, 983, 2281
DdeI	CTNAG	6 cut(s)	502, 519, 1446, 1686, 1749, 2212
EaeI	YGGCCR	3 cut(s)	868, 1351, 2383
Eam1104I	CTCTTC	1 cut(s)	1137
EarI	CTCTTC	1 cut(s)	1137
EciI	GGCGGA	1 cut(s)	1382
Eco130I	CCWWGG	2 cut(s)	1538, 1904
Eco24I	GRGCYC	5 cut(s)	832, 1072, 1241, 1748, 2027
Eco31I	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2138, 2205
Eco47I	GGWCC	1 cut(s)	2013
Eco81I	CCTNAGG	2 cut(s)	519, 1446
Eco88I	CYCGRG	2 cut(s)	388, 968
Eco91I	GGTNACC	1 cut(s)	1959
EcoNI	CCTNNNNNAGG	2 cut(s)	726, 1011
EcoO109I	RGGNCCY	1 cut(s)	1745
EcoO65I	GGTNACC	1 cut(s)	1959
EcoRI	GAATTC	1 cut(s)	1023
EcoRII	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 1955, 2194
EcoT14I	CCWWGG	2 cut(s)	1538, 1904
EcoT22I	ATGCAT	1 cut(s)	1159
EcoT38I	GRGCYC	5 cut(s)	832, 1072, 1241, 1748, 2027
ErhI	CCWWGG	2 cut(s)	1538, 1904
Esp3I	CGTCTC	1 cut(s)	1998
FalI	AAGNNNNNCTT	2 cut(s)	196, 228
FaqI	GGGAC	3 cut(s)	556, 948, 975
FauI	CCCGC	2 cut(s)	2016, 2272
FblI	GTMKAC	1 cut(s)	1341
Fnu4HI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1563, 1683, 1719, 2050
FokI	GGATG	8 cut(s)	22, 279, 1038, 1390, 1450, 1634, 1686, 2014
FriOI	GRGCYC	5 cut(s)	832, 1072, 1241, 1748, 2027
Fsp4HI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1563, 1683, 1719, 2050
FspBI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 1860, 2004
GlaI	GCGC	1 cut(s)	2268
GluI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1563, 1683, 1719, 2050
GsaI	CCCAGC	2 cut(s)	1274, 1773
GsuI	CTGGAG	7 cut(s)	159, 698, 760, 862, 963, 1122, 1939
HaeIII	GGCC	9 cut(s)	605, 870, 1011, 1096, 1353, 1746, 2148, 2263, 2385
HapII	CCGG	2 cut(s)	1395, 2386
HhaI	GCGC	1 cut(s)	2269
Hin6I	GCGC	1 cut(s)	2267
HinP1I	GCGC	1 cut(s)	2267
HincII	GTYRAC	1 cut(s)	290
HindII	GTYRAC	1 cut(s)	290
HpaII	CCGG	2 cut(s)	1395, 2386
Hpy166II	GTNNAC	4 cut(s)	290, 814, 1342, 1506
Hpy8I	GTNNAC	4 cut(s)	290, 814, 1342, 1506
HpyCH4III	ACNGT	8 cut(s)	601, 939, 1124, 1510, 1992, 2082, 2253, 2292
HpyCH4IV	ACGT	1 cut(s)	310
HpyF10VI	GCNNNNNNNGC	8 cut(s)	827, 963, 1067, 1478, 1696, 1727, 1775, 2275
HpyF3I	CTNAG	6 cut(s)	502, 519, 1446, 1686, 1749, 2212
HpySE526I	ACGT	1 cut(s)	310
HspAI	GCGC	1 cut(s)	2267
KpnI	GGTACC	1 cut(s)	722
KspI	CCGCGG	1 cut(s)	2012
Lsp1109I	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1549, 1669, 1730, 2061
LweI	GCATC	4 cut(s)	154, 567, 1166, 1708
MaeI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 1860, 2004
MaeII	ACGT	1 cut(s)	310
MaeIII	GTNAC	7 cut(s)	850, 893, 1039, 1118, 1141, 1959, 1986
MboII	GAAGA	6 cut(s)	64, 162, 500, 1124, 1992, 2200
MfeI	CAATTG	1 cut(s)	525
MflI	RGATCY	4 cut(s)	134, 206, 490, 863
MhlI	GDGCHC	8 cut(s)	748, 832, 909, 1072, 1241, 1508, 1748, 2027
MlsI	TGGCCA	1 cut(s)	870
MluNI	TGGCCA	1 cut(s)	870
MlyI	GAGTC	3 cut(s)	494, 1504, 1552
MmeI	TCCRAC	1 cut(s)	286
Mox20I	TGGCCA	1 cut(s)	870
Mph1103I	ATGCAT	1 cut(s)	1159
MscI	TGGCCA	1 cut(s)	870
MseI	TTAA	9 cut(s)	102, 654, 1308, 1419, 1572, 1973, 2219, 2340, 2360
MslI	CAYNNNNRTG	4 cut(s)	1032, 1296, 1887, 1974
Msp20I	TGGCCA	1 cut(s)	870
MspA1I	CMGCKG	5 cut(s)	497, 557, 1682, 2011, 2052
MspI	CCGG	2 cut(s)	1395, 2386
MunI	CAATTG	1 cut(s)	525
MvaI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 1957, 2196
MvnI	CGCG	2 cut(s)	2011, 2267
MwoI	GCNNNNNNNGC	8 cut(s)	827, 963, 1067, 1478, 1696, 1727, 1775, 2275
NciI	CCSGG	1 cut(s)	1396
NmuCI	GTSAC	5 cut(s)	850, 893, 1118, 1959, 1986
NsiI	ATGCAT	1 cut(s)	1159
NspI	RCATGY	2 cut(s)	1295, 2179
PagI	TCATGA	1 cut(s)	2158
PaqCI	CACCTGC	2 cut(s)	1052, 1774
PciI	ACATGT	2 cut(s)	1291, 2175
PfeI	GAWTC	7 cut(s)	83, 200, 317, 1079, 1760, 1832, 2162
PflMI	CCANNNNNTGG	2 cut(s)	284, 890
PfoI	TCCNGGA	1 cut(s)	1213
PkrI	GCNGC	9 cut(s)	515, 556, 951, 1186, 1269, 1564, 1684, 1720, 2051
PleI	GAGTC	3 cut(s)	494, 1503, 1551
PpsI	GAGTC	3 cut(s)	494, 1503, 1551
PscI	ACATGT	2 cut(s)	1291, 2175
PshAI	GACNNNNGTC	1 cut(s)	504
PshBI	ATTAAT	2 cut(s)	654, 2219
PsiI	TTATAA	1 cut(s)	1454
Psp6I	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 1955, 2194
PspEI	GGTNACC	1 cut(s)	1959
PspFI	CCCAGC	2 cut(s)	1270, 1769
PspGI	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 1955, 2194
PspOMI	GGGCCC	1 cut(s)	1744
PspPI	GGNCC	7 cut(s)	604, 1010, 1744, 1745, 2013, 2147, 2262
PstI	CTGCAG	1 cut(s)	556
PstNI	CAGNNNCTG	3 cut(s)	320, 866, 890
PsuI	RGATCY	4 cut(s)	134, 206, 490, 863
PvuII	CAGCTG	3 cut(s)	497, 557, 1682
RsaI	GTAC	4 cut(s)	313, 720, 984, 2282
RsaNI	GTAC	4 cut(s)	312, 719, 983, 2281
RseI	CAYNNNNRTG	4 cut(s)	1032, 1296, 1887, 1974
SacII	CCGCGG	1 cut(s)	2012
SaqAI	TTAA	9 cut(s)	102, 654, 1308, 1419, 1572, 1973, 2219, 2340, 2360
SatI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1563, 1683, 1719, 2050
Sau96I	GGNCC	7 cut(s)	604, 1010, 1744, 1745, 2013, 2147, 2262
SchI	GAGTC	3 cut(s)	494, 1504, 1552
SduI	GDGCHC	8 cut(s)	748, 832, 909, 1072, 1241, 1508, 1748, 2027
SfaNI	GCATC	4 cut(s)	154, 567, 1166, 1708
SfcI	CTRYAG	2 cut(s)	552, 1677
Sfr303I	CCGCGG	1 cut(s)	2012
SgrBI	CCGCGG	1 cut(s)	2012
SinI	GGWCC	1 cut(s)	2013
SmiMI	CAYNNNNRTG	4 cut(s)	1032, 1296, 1887, 1974
SmlI	CTYRAG	5 cut(s)	581, 616, 1018, 1462, 2327
SmoI	CTYRAG	5 cut(s)	581, 616, 1018, 1462, 2327
SsiI	CCGC	6 cut(s)	511, 1367, 2009, 2011, 2052, 2265
SspMI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 1860, 2004
StyI	CCWWGG	2 cut(s)	1538, 1904
TaaI	ACNGT	8 cut(s)	601, 939, 1124, 1510, 1992, 2082, 2253, 2292
TaiI	ACGT	1 cut(s)	313
TaqI	TCGA	4 cut(s)	81, 148, 187, 2182
TatI	WGTACW	1 cut(s)	2280
TfiI	GAWTC	7 cut(s)	83, 200, 317, 1079, 1760, 1832, 2162
Tru1I	TTAA	9 cut(s)	102, 654, 1308, 1419, 1572, 1973, 2219, 2340, 2360
Tru9I	TTAA	9 cut(s)	102, 654, 1308, 1419, 1572, 1973, 2219, 2340, 2360
TscAI	CASTG	4 cut(s)	577, 604, 1894, 2047
TseFI	GTSAC	5 cut(s)	850, 893, 1118, 1959, 1986
TseI	GCWGC	9 cut(s)	513, 554, 949, 1184, 1267, 1562, 1682, 1718, 2049
Tsp45I	GTSAC	5 cut(s)	850, 893, 1118, 1959, 1986
TspGWI	ACGGA	2 cut(s)	697, 1692
TspRI	CASTG	4 cut(s)	577, 604, 1894, 2047
Van91I	CCANNNNNTGG	2 cut(s)	284, 890
VneI	GTGCAC	1 cut(s)	1504
VpaK11BI	GGWCC	1 cut(s)	2013
VspI	ATTAAT	2 cut(s)	654, 2219
XagI	CCTNNNNNAGG	2 cut(s)	726, 1011
XapI	RAATTY	6 cut(s)	98, 660, 1023, 1177, 1816, 2089
XbaI	TCTAGA	3 cut(s)	196, 773, 1859
XceI	RCATGY	2 cut(s)	1295, 2179
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1480
XmiI	GTMKAC	1 cut(s)	1341
XspI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 1860, 2004
Zsp2I	ATGCAT	1 cut(s)	1159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.