Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0001511

Physical Location & Seq

Genomic Coordinates Forward (+)

13970112 .. 13978224

Gene Structure 8113 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG164200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGCCTTCGTGGTGGAGAAAGTCTTCATCCAAAGAAGTAAAGAAGAAAGCAAATAAGGAGAGTTTCATTGATACCATAATGACTATACACCGAAAACTTAAGAGTTCTTCTGAAGAAAAGTTTAACAGTAGTTCAGGGGGTTCTAGGAGACGATGTACTGACACCGTTTCAGAAATGGGTTCTCAATCCAGGGCTTTGTCACCATTAACATCGACACAAGTATCACGCTGTCAGAGTTTTGCAGAGAGGCCTCATGCCCAACCACTACCTCTTCCTAGAGTGCAACTTTCCAACATTGGGCGTTCTGACTCTGCTGTAACGGCATCATCAAAAACCGGGTCTGATACAGGGCCCAAGCAATTGCTCTATGTGCCCCTTTCAAGCCCTGGCCGTATCTTGAGCAGGGCAGTACCTGCAGATGTGGACGGTGATATAGCCACTGCTTCCATATCTAGTGATAGTTCTATTGATAGTGATGACCCACCTGACTCACGTCTTCTTAGTCCCATGGCCTCTGACTGCGAATATGGCACCAGAACAACTCTGAACAGTCCTTCCAGGGTAATGCAAAAGGACCAATTCCCTAATGTCAACCAAAAGAACACAAAAGAGACTTTGAAGCCGCCTAATCTTCTATTCAATAATCAGTTTATGACCACATCACCAAAACGGGGACCTTCAAGGCCACATTTGCAGAACATACAAATTCCTTACAATGGTGCTTTCTCTAGTGCTCCAGACAGCTCCATGTCAAGTCCTTCTAGAAGTCCTATGAGAGTGTTTGGCTCTGATCAAGTTCTGATCTCCAGTTTCTGGGCAGGAAAGCCTTATCCCGATATAGCTTCTACCCACTGCTCCAGTCCAGGCTCAGGTCATAATTCCGGACATAATTCGGTTGGAGGGGATCTGTCAGCACAGCTTTTTTGGCAGCAGAACAGGTGTAGCCCCGAGTGTTCTCCAATACCTAGTCCCAGAATGACCAGTCCTGGCCCAAGCTCCAGAATGACCAGTCCTGGCCCCAGCTCCAGAATACAAAGTGCTGCAGTTACCCCTCTGCACCCACGAGCTGGAGGGCCAGCCATGGAGTCACCTACAAGCCGACCCGATGATGGAAAGCAGAAAAGCCACCGATTACCACTTCCTCCAATAACAACAACTAGGACCTGTCCTTTTTCTCCTGCAACAACTCCCACAGTTCCTCGCAGTCCTGGTAGGGCAGAAAATCCACTAAGTCCCGGTTCACGCTGGAAGAAGGGGCGCCTGCTTGGGAGGGGTACATTTGGACATGTGTATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTATTTGCAGATGATGCAAAGTCAAAGGAAAGTGCGCAGCAGCTTGGGCAAGAAATTTCTTTGCTAAGTCGACTACGACATCCAAATATAGTGCAGTATTTAGGATCTGAGACGGTAGATGATAAACTCTACATATACTTGGAGTATGTGTCTGGTGGATCCATCTATAAACTGCTTCAAGAGTATGGTCAGTTTGGTGAAATAGCAATTCGTAGTTATACTCAACAAATCTTGTCAGGGCTTTCGTACTTGCACGCGAAAAACACTCTCCACAGGGATATCAAAGGAGCAAATATATTAGTAGATCCCAATGGTCGGGTAAAGTTGGCAGATTTTGGGATGGCAAAGCATATTACTGGGGAGTCTTGTCCGTTATCCTTCAAGGGGAGCCCATATTGGATGGCACCAGAGGTTATCAAGAATTCAAATGGTTGTAATCTTGCGGTTGATATATGGAGCCTGGGTTGCACTGTTCTTGAGATGGCCACAACAAAACCACCTTGGAGCCAATATGAAGGGGTTGCTGCTATGTTTAAGATAGGAAACAGCAAGGAACTTCCTGGAATTCCTGGACATCTTTCAGAGGATGGGAAGGACTTTGTTAGGCTGTGTTTGCAACGTAACCCACTGCATCGTCCTACAGCTGCTCAGCTTTTGGAGCATCCTTTTGTTAAGAATGTTGCTCCACTGGAAAGACCCATTATGAGTTTGGATCCTTCTGAAGGACCACCTGCGGTGACGAATGCAGTGAGATCTCAGGCCTTTGGACATGGGAGAAATAATTTGCACTTAGACTCTGAAGGGATGACTATTCACCAGTCCAGAGGCTCAAGAACTGGATCAGCATCAAGACATGTCCACACACCAAGAAATGTGTCTTGCCCAGTTTCACCCATTGGAAGCCCACTTCTTCAGTCTAGATCACCACAACATGTCAGTGGAAGGATGTCTCCCTCTCCCATATCTAGCCCCCGTATCACATCCGGTGCATCTACACCTCTCACTGGTGGTGATGGTGCAATCCCTTTTCAACACTTGAAGCCACCAACAACCTACTTACATGAAGGCACACAGATGACCCAGAGATCCCAGAACAGTAGTTTCTATACAAATGGCAGCATGCGATATCATGAGCCAAAGCCTGATCTATTTCGAGGGATTCCGCAGGCCTCTCATGATTTCCGGGATATAATTTCATCTGACAATGTTGTGCACAGAGACCAGTTTTGGAAGCCTGTTCCTGGGCAGCAAAGAGAGTTCTGTGATGTGCAGTCGGTTTTGGCTGACCGTGTGTCTCAGCAGCTCTTAATGGATCATATGAAGCTGAACCCATCCATGGACCTAAATCTTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0001932 GO:0001934 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009893 GO:0009987 GO:0010016 GO:0010098 GO:0010103 GO:0010229 GO:0010374 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090698 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

899

Amino Acids

98.08

Weight (kDa)

9.4

Isoelectric Point (pI)

57.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	417 - 672	3.6e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	419 - 668	7.1e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63700 AT1G63700
fragaria_vesca	FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920
malus_domestica	MD01G1205500.v1.1 MD06G1085900.v1.1 MD07G1274900.v1.1
prunus_persica	Prupe.2G298100_v2.0.a1 Prupe.2G298100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1
pyrus_communis	pycom01g21500 pycom06g08220 pycom07g25100
rosa_chinensis	RchiOBHm_Chr1g0377881 RchiOBHm_Chr7g0197281
rosa_laevigata	RLG00000003944 RLG00000026489
rosa_multiflora	Rmu_co8459889.1_g000001 Rmu_sc0004491.1_g000001 Rmu_sc0004824.1_g000011 Rmu_sc0010019.1_g000003 Rmu_sc0017623.1_g000004 Rmu_sc0030897.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258510 Rroxscaffold_4G00280980
rosa_rugosa	Rorug01G0405400 Rorug07G0039200
rosa_samantha	Rh1AG426400 Rh1BG382900 Rh1CG396700 Rh1DG413900 Rh7AG164200 Rh7BG166000 Rh7CG172700 Rh7DG165400
rosa_wichuraiana	Rw1G037210 Rw7G014320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2083
Acc16I	TGCGCA	1 cut(s)	1380
Acc36I	ACCTGC	2 cut(s)	421, 2083
AccB1I	GGYRCC	3 cut(s)	530, 1257, 1747
AccB7I	CCANNNNNTGG	2 cut(s)	813, 1067
AccI	GTMKAC	1 cut(s)	1414
AccII	CGCG	1 cut(s)	1601
AccIII	TCCGGA	1 cut(s)	881
AciI	CCGC	4 cut(s)	623, 1787, 2078, 2507
AcoI	YGGCCR	2 cut(s)	388, 1827
AcsI	RAATTY	4 cut(s)	705, 1398, 1765, 1908
AcuI	CTGAAG	4 cut(s)	132, 2085, 2163, 2240
AcyI	GRCGYC	1 cut(s)	1258
AfaI	GTAC	4 cut(s)	157, 411, 1276, 1592
AflII	CTTAAG	1 cut(s)	98
AflIII	ACRYGT	3 cut(s)	1285, 2197, 2275
AgsI	TTSAA	9 cut(s)	381, 619, 640, 681, 1523, 1726, 1770, 2375, 2383
AhdI	GACNNNNNGTC	1 cut(s)	2635
AjiI	CACGTC	1 cut(s)	494
AloI	GAACNNNNNNTCC	2 cut(s)	539, 571
Alw21I	GWGCWC	2 cut(s)	736, 2559
Alw26I	GTCTC	6 cut(s)	142, 605, 1448, 2298, 2556, 2643
Alw44I	GTGCAC	1 cut(s)	2555
AlwNI	CAGNNNCTG	2 cut(s)	413, 813
Ama87I	CYCGRG	1 cut(s)	947
Aor13HI	TCCGGA	1 cut(s)	881
ApaI	GGGCCC	1 cut(s)	354
ApaLI	GTGCAC	1 cut(s)	2555
ApeKI	GCWGC	9 cut(s)	928, 1040, 1381, 1384, 1868, 1988, 2460, 2590, 2644
ApoI	RAATTY	4 cut(s)	705, 1398, 1765, 1908
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
Asp700I	GAANNNNTTC	1 cut(s)	22
AspLEI	GCGC	2 cut(s)	1260, 1381
AsuC2I	CCSGG	3 cut(s)	337, 1236, 2528
AvaI	CYCGRG	1 cut(s)	947
AvaII	GGWCC	5 cut(s)	574, 674, 1161, 2069, 2683
BaeGI	GKGCMC	3 cut(s)	354, 375, 2559
BaeI	ACNNNNGTAYC	4 cut(s)	204, 237, 1274, 1307
BalI	TGGCCA	1 cut(s)	1829
BamHI	GGATCC	2 cut(s)	1502, 2056
BanI	GGYRCC	3 cut(s)	530, 1257, 1747
BanII	GRGCYC	2 cut(s)	354, 1736
BauI	CACGAG	1 cut(s)	1062
BbsI	GAAGAC	2 cut(s)	15, 488
Bbv12I	GWGCWC	2 cut(s)	736, 2559
BbvI	GCAGC	9 cut(s)	940, 1027, 1393, 1396, 1855, 1975, 2472, 2602, 2656
BccI	CCATC	8 cut(s)	1103, 1514, 1678, 1738, 1819, 1925, 2351, 2683
BceAI	ACGGC	2 cut(s)	336, 375
BclI	TGATCA	1 cut(s)	790
BcnI	CCSGG	3 cut(s)	337, 1236, 2528
BcoDI	GTCTC	6 cut(s)	142, 605, 1448, 2298, 2556, 2643
BfmI	CTRYAG	3 cut(s)	414, 1041, 1983
BfoI	RGCGCY	1 cut(s)	1261
BfrI	CTTAAG	1 cut(s)	98
BfuAI	ACCTGC	2 cut(s)	421, 2083
BglII	AGATCT	1 cut(s)	2096
BlpI	GCTNAGC	1 cut(s)	1992
Bme18I	GGWCC	5 cut(s)	574, 674, 1161, 2069, 2683
BmeRI	GACNNNNNGTC	1 cut(s)	2635
BmeT110I	CYCGRG	1 cut(s)	947
BmgBI	CACGTC	1 cut(s)	494
BmrI	ACTGGG	2 cut(s)	1710, 2222
BmsI	GCATC	6 cut(s)	332, 1348, 1984, 2014, 2198, 2342
BmuI	ACTGGG	2 cut(s)	1710, 2222
BoxI	GACNNNNGTC	1 cut(s)	492
BpiI	GAAGAC	2 cut(s)	15, 488
BpmI	CTGGAG	6 cut(s)	720, 790, 841, 982, 1009, 1089
Bpu10I	CCTNAGC	1 cut(s)	868
Bpu1102I	GCTNAGC	1 cut(s)	1992
BpuEI	CTTGAG	3 cut(s)	418, 1841, 2158
BpuMI	CCSGG	3 cut(s)	337, 1236, 2528
BsaBI	GATNNNNATC	1 cut(s)	2188
BsaHI	GRCGYC	1 cut(s)	1258
BsaI	GGTCTC	1 cut(s)	2556
BsaJI	CCNNGG	9 cut(s)	189, 385, 507, 558, 1080, 1804, 1844, 2585, 2679
BsaWI	WCCGGW	2 cut(s)	881, 2327
BsaXI	ACNNNNNCTCC	6 cut(s)	139, 169, 1478, 1508, 1792, 1822
Bse3DI	GCAATG	1 cut(s)	1335
Bse8I	GATNNNNATC	1 cut(s)	2188
BseAI	TCCGGA	1 cut(s)	881
BseDI	CCNNGG	9 cut(s)	189, 385, 507, 558, 1080, 1804, 1844, 2585, 2679
BseJI	GATNNNNATC	1 cut(s)	2188
BseMI	GCAATG	1 cut(s)	1335
BseMII	CTCAG	5 cut(s)	882, 1443, 2006, 2114, 2654
BseSI	GKGCMC	3 cut(s)	354, 375, 2559
BseXI	GCAGC	9 cut(s)	940, 1027, 1393, 1396, 1855, 1975, 2472, 2602, 2656
BseYI	CCCAGC	1 cut(s)	1019
BsgI	GTGCAG	3 cut(s)	1040, 1457, 2633
Bsh1236I	CGCG	1 cut(s)	1601
BshNI	GGYRCC	3 cut(s)	530, 1257, 1747
BsiHKAI	GWGCWC	2 cut(s)	736, 2559
BsiHKCI	CYCGRG	1 cut(s)	947
BsiSI	CCGG	5 cut(s)	336, 882, 1236, 2328, 2527
BslFI	GGGAC	4 cut(s)	489, 687, 954, 1218
BsmAI	GTCTC	6 cut(s)	142, 605, 1448, 2298, 2556, 2643
BsmBI	CGTCTC	2 cut(s)	142, 1448
BsmFI	GGGAC	4 cut(s)	489, 687, 954, 1218
BsmI	GAATGC	1 cut(s)	2092
Bso31I	GGTCTC	1 cut(s)	2556
BsoBI	CYCGRG	1 cut(s)	947
Bsp120I	GGGCCC	1 cut(s)	350
Bsp1286I	GDGCHC	5 cut(s)	354, 375, 736, 1736, 2559
Bsp13I	TCCGGA	1 cut(s)	881
Bsp1720I	GCTNAGC	1 cut(s)	1992
Bsp19I	CCATGG	3 cut(s)	507, 1080, 2679
BspACI	CCGC	4 cut(s)	623, 1787, 2078, 2507
BspCNI	CTCAG	5 cut(s)	881, 1444, 2005, 2113, 2653
BspEI	TCCGGA	1 cut(s)	881
BspFNI	CGCG	1 cut(s)	1601
BspHI	TCATGA	2 cut(s)	2473, 2518
BspMAI	CTGCAG	2 cut(s)	418, 1045
BspMI	ACCTGC	2 cut(s)	421, 2083
BspT107I	GGYRCC	3 cut(s)	530, 1257, 1747
BspTI	CTTAAG	1 cut(s)	98
BspTNI	GGTCTC	1 cut(s)	2556
BsrDI	GCAATG	1 cut(s)	1335
BssECI	CCNNGG	9 cut(s)	189, 385, 507, 558, 1080, 1804, 1844, 2585, 2679
BssNI	GRCGYC	1 cut(s)	1258
BssSI	CACGAG	1 cut(s)	1062
BssT1I	CCWWGG	4 cut(s)	507, 1080, 1844, 2679
Bst2BI	CACGAG	1 cut(s)	1062
Bst6I	CTCTTC	1 cut(s)	276
BstACI	GRCGYC	1 cut(s)	1258
BstAFI	CTTAAG	1 cut(s)	98
BstAPI	GCANNNNNTGC	2 cut(s)	413, 1358
BstC8I	GCNNGC	5 cut(s)	1077, 1262, 1599, 2465, 2511
BstDEI	CTNAG	9 cut(s)	500, 868, 1229, 1409, 1452, 1992, 2100, 2134, 2640
BstDSI	CCRYGG	3 cut(s)	507, 1080, 2679
BstENI	CCTNNNNNAGG	1 cut(s)	2064
BstFNI	CGCG	1 cut(s)	1601
BstH2I	RGCGCY	1 cut(s)	1261
BstHHI	GCGC	2 cut(s)	1260, 1381
BstMAI	GTCTC	6 cut(s)	142, 605, 1448, 2298, 2556, 2643
BstNSI	RCATGY	4 cut(s)	1289, 2201, 2279, 2467
BstPAI	GACNNNNGTC	1 cut(s)	492
BstSFI	CTRYAG	3 cut(s)	414, 1041, 1983
BstSLI	GKGCMC	3 cut(s)	354, 375, 2559
BstUI	CGCG	1 cut(s)	1601
BstV1I	GCAGC	9 cut(s)	940, 1027, 1393, 1396, 1855, 1975, 2472, 2602, 2656
BstV2I	GAAGAC	2 cut(s)	15, 488
BstX2I	RGATCY	7 cut(s)	904, 1448, 1502, 1648, 2056, 2096, 2429
BstYI	RGATCY	7 cut(s)	904, 1448, 1502, 1648, 2056, 2096, 2429
BtgI	CCRYGG	3 cut(s)	507, 1080, 2679
BtrI	CACGTC	1 cut(s)	494
BtsI	GCAGTG	4 cut(s)	438, 850, 1970, 2097
BtsIMutI	CAGTG	9 cut(s)	438, 850, 1312, 1812, 1970, 2030, 2097, 2287, 2346
BveI	ACCTGC	2 cut(s)	421, 2083
Cac8I	GCNNGC	5 cut(s)	1077, 1262, 1599, 2465, 2511
CaiI	CAGNNNCTG	2 cut(s)	413, 813
CciI	TCATGA	2 cut(s)	2473, 2518
CfoI	GCGC	2 cut(s)	1260, 1381
Csp6I	GTAC	4 cut(s)	156, 410, 1275, 1591
CviQI	GTAC	4 cut(s)	156, 410, 1275, 1591
DdeI	CTNAG	9 cut(s)	500, 868, 1229, 1409, 1452, 1992, 2100, 2134, 2640
DinI	GGCGCC	1 cut(s)	1259
DriI	GACNNNNNGTC	1 cut(s)	2635
EaeI	YGGCCR	2 cut(s)	388, 1827
Eam1104I	CTCTTC	1 cut(s)	276
Eam1105I	GACNNNNNGTC	1 cut(s)	2635
EarI	CTCTTC	1 cut(s)	276
Eco130I	CCWWGG	4 cut(s)	507, 1080, 1844, 2679
Eco147I	AGGCCT	3 cut(s)	250, 2105, 2513
Eco24I	GRGCYC	2 cut(s)	354, 1736
Eco31I	GGTCTC	1 cut(s)	2556
Eco32I	GATATC	2 cut(s)	1624, 2471
Eco47I	GGWCC	5 cut(s)	574, 674, 1161, 2069, 2683
Eco57I	CTGAAG	4 cut(s)	132, 2085, 2163, 2240
Eco88I	CYCGRG	1 cut(s)	947
EcoNI	CCTNNNNNAGG	1 cut(s)	2064
EcoO109I	RGGNCCY	3 cut(s)	350, 674, 1161
EcoRI	GAATTC	2 cut(s)	1765, 1908
EcoRV	GATATC	2 cut(s)	1624, 2471
EcoT14I	CCWWGG	4 cut(s)	507, 1080, 1844, 2679
EcoT38I	GRGCYC	2 cut(s)	354, 1736
EgeI	GGCGCC	1 cut(s)	1259
EheI	GGCGCC	1 cut(s)	1259
ErhI	CCWWGG	4 cut(s)	507, 1080, 1844, 2679
Esp3I	CGTCTC	2 cut(s)	142, 1448
FaqI	GGGAC	4 cut(s)	489, 687, 954, 1218
FauNDI	CATATG	1 cut(s)	2661
FbaI	TGATCA	1 cut(s)	790
FblI	GTMKAC	1 cut(s)	1414
FriOI	GRGCYC	2 cut(s)	354, 1736
FspI	TGCGCA	1 cut(s)	1380
GlaI	GCGC	2 cut(s)	1259, 1380
GsaI	CCCAGC	1 cut(s)	1023
GsuI	CTGGAG	6 cut(s)	720, 790, 841, 982, 1009, 1089
HaeII	RGCGCY	1 cut(s)	1261
HapII	CCGG	5 cut(s)	336, 882, 1236, 2328, 2527
HhaI	GCGC	2 cut(s)	1260, 1381
Hin1I	GRCGYC	1 cut(s)	1258
Hin6I	GCGC	2 cut(s)	1258, 1379
HinP1I	GCGC	2 cut(s)	1258, 1379
HincII	GTYRAC	2 cut(s)	592, 1415
HindII	GTYRAC	2 cut(s)	592, 1415
HinfI	GANTC	6 cut(s)	308, 488, 1085, 1706, 2138, 2503
HpaII	CCGG	5 cut(s)	336, 882, 1236, 2328, 2527
Hpy166II	GTNNAC	6 cut(s)	424, 592, 1241, 1415, 2203, 2557
Hpy8I	GTNNAC	6 cut(s)	424, 592, 1241, 1415, 2203, 2557
HpyCH4IV	ACGT	2 cut(s)	493, 1963
HpyF3I	CTNAG	9 cut(s)	500, 868, 1229, 1409, 1452, 1992, 2100, 2134, 2640
HpySE526I	ACGT	2 cut(s)	493, 1963
Hsp92I	GRCGYC	1 cut(s)	1258
HspAI	GCGC	2 cut(s)	1258, 1379
KasI	GGCGCC	1 cut(s)	1257
Kpn2I	TCCGGA	1 cut(s)	881
Ksp22I	TGATCA	1 cut(s)	790
Lsp1109I	GCAGC	9 cut(s)	940, 1027, 1393, 1396, 1855, 1975, 2472, 2602, 2656
LweI	GCATC	6 cut(s)	332, 1348, 1984, 2014, 2198, 2342
MaeII	ACGT	2 cut(s)	493, 1963
MaeIII	GTNAC	7 cut(s)	198, 316, 1045, 1086, 1339, 1964, 2080
MfeI	CAATTG	1 cut(s)	359
MflI	RGATCY	7 cut(s)	904, 1448, 1502, 1648, 2056, 2096, 2429
MhlI	GDGCHC	5 cut(s)	354, 375, 736, 1736, 2559
MlsI	TGGCCA	1 cut(s)	1829
MluNI	TGGCCA	1 cut(s)	1829
Mly113I	GGCGCC	1 cut(s)	1258
MlyI	GAGTC	5 cut(s)	302, 482, 1094, 1715, 2132
MmeI	TCCRAC	2 cut(s)	315, 877
Mox20I	TGGCCA	1 cut(s)	1829
MroI	TCCGGA	1 cut(s)	881
MroXI	GAANNNNTTC	1 cut(s)	22
MscI	TGGCCA	1 cut(s)	1829
MseI	TTAA	7 cut(s)	99, 123, 206, 1302, 1878, 2016, 2651
MslI	CAYNNNNRTG	2 cut(s)	2280, 2417
Msp20I	TGGCCA	1 cut(s)	1829
MspA1I	CMGCKG	1 cut(s)	1988
MspCI	CTTAAG	1 cut(s)	98
MspI	CCGG	5 cut(s)	336, 882, 1236, 2328, 2527
MunI	CAATTG	1 cut(s)	359
Mva1269I	GAATGC	1 cut(s)	2092
MvnI	CGCG	1 cut(s)	1601
NarI	GGCGCC	1 cut(s)	1258
NciI	CCSGG	3 cut(s)	337, 1236, 2528
NcoI	CCATGG	3 cut(s)	507, 1080, 2679
NdeI	CATATG	1 cut(s)	2661
NmuCI	GTSAC	3 cut(s)	198, 1086, 2080
NsbI	TGCGCA	1 cut(s)	1380
NspI	RCATGY	4 cut(s)	1289, 2201, 2279, 2467
PaeI	GCATGC	1 cut(s)	2467
PagI	TCATGA	2 cut(s)	2473, 2518
PaqCI	CACCTGC	1 cut(s)	2083
PceI	AGGCCT	3 cut(s)	250, 2105, 2513
PciI	ACATGT	3 cut(s)	1285, 2197, 2275
PctI	GAATGC	1 cut(s)	2092
PdmI	GAANNNNTTC	1 cut(s)	22
PfeI	GAWTC	1 cut(s)	2503
PflMI	CCANNNNNTGG	2 cut(s)	813, 1067
PfoI	TCCNGGA	3 cut(s)	1903, 1912, 2526
PleI	GAGTC	5 cut(s)	302, 482, 1093, 1714, 2132
PluTI	GGCGCC	1 cut(s)	1261
PpsI	GAGTC	5 cut(s)	302, 482, 1093, 1714, 2132
PpuMI	RGGWCCY	2 cut(s)	674, 1161
PscI	ACATGT	3 cut(s)	1285, 2197, 2275
PshAI	GACNNNNGTC	1 cut(s)	492
Psp5II	RGGWCCY	2 cut(s)	674, 1161
PspFI	CCCAGC	1 cut(s)	1019
PspOMI	GGGCCC	1 cut(s)	350
PspPPI	RGGWCCY	2 cut(s)	674, 1161
PstI	CTGCAG	2 cut(s)	418, 1045
PstNI	CAGNNNCTG	2 cut(s)	413, 813
PsuI	RGATCY	7 cut(s)	904, 1448, 1502, 1648, 2056, 2096, 2429
PvuII	CAGCTG	1 cut(s)	1988
RsaI	GTAC	4 cut(s)	157, 411, 1276, 1592
RsaNI	GTAC	4 cut(s)	156, 410, 1275, 1591
RseI	CAYNNNNRTG	2 cut(s)	2280, 2417
SalI	GTCGAC	1 cut(s)	1413
SaqAI	TTAA	7 cut(s)	99, 123, 206, 1302, 1878, 2016, 2651
SchI	GAGTC	5 cut(s)	302, 482, 1094, 1715, 2132
SduI	GDGCHC	5 cut(s)	354, 375, 736, 1736, 2559
SfaNI	GCATC	6 cut(s)	332, 1348, 1984, 2014, 2198, 2342
SfcI	CTRYAG	3 cut(s)	414, 1041, 1983
SfoI	GGCGCC	1 cut(s)	1259
SinI	GGWCC	5 cut(s)	574, 674, 1161, 2069, 2683
SmiMI	CAYNNNNRTG	2 cut(s)	2280, 2417
SmlI	CTYRAG	4 cut(s)	98, 397, 1820, 2173
SmoI	CTYRAG	4 cut(s)	98, 397, 1820, 2173
SphI	GCATGC	1 cut(s)	2467
SseBI	AGGCCT	3 cut(s)	250, 2105, 2513
SsiI	CCGC	4 cut(s)	623, 1787, 2078, 2507
SspDI	GGCGCC	1 cut(s)	1257
StuI	AGGCCT	3 cut(s)	250, 2105, 2513
StyI	CCWWGG	4 cut(s)	507, 1080, 1844, 2679
TaiI	ACGT	2 cut(s)	496, 1966
TaqI	TCGA	3 cut(s)	212, 1414, 2497
TatI	WGTACW	1 cut(s)	155
TauI	GCSGC	1 cut(s)	625
TfiI	GAWTC	1 cut(s)	2503
Tru1I	TTAA	7 cut(s)	99, 123, 206, 1302, 1878, 2016, 2651
Tru9I	TTAA	7 cut(s)	99, 123, 206, 1302, 1878, 2016, 2651
TscAI	CASTG	9 cut(s)	445, 857, 1312, 1819, 1977, 2037, 2097, 2287, 2353
TseFI	GTSAC	3 cut(s)	198, 1086, 2080
TseI	GCWGC	9 cut(s)	928, 1040, 1381, 1384, 1868, 1988, 2460, 2590, 2644
Tsp45I	GTSAC	3 cut(s)	198, 1086, 2080
TspDTI	ATGAA	7 cut(s)	15, 55, 1346, 1872, 2421, 2529, 2678
TspGWI	ACGGA	1 cut(s)	1704
TspRI	CASTG	9 cut(s)	445, 857, 1312, 1819, 1977, 2037, 2097, 2287, 2353
Van91I	CCANNNNNTGG	2 cut(s)	813, 1067
Vha464I	CTTAAG	1 cut(s)	98
VneI	GTGCAC	1 cut(s)	2555
VpaK11BI	GGWCC	5 cut(s)	574, 674, 1161, 2069, 2683
XagI	CCTNNNNNAGG	1 cut(s)	2064
XapI	RAATTY	4 cut(s)	705, 1398, 1765, 1908
XbaI	TCTAGA	2 cut(s)	761, 2261
XceI	RCATGY	4 cut(s)	1289, 2201, 2279, 2467
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2050
XmiI	GTMKAC	1 cut(s)	1414
XmnI	GAANNNNTTC	1 cut(s)	22

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.