Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001511

Physical Location & Seq

Genomic Coordinates Reverse (-)

64881466 .. 64888216

Gene Structure 6751 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G037210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2715 bp

ATGAGAAATATGCCTTCATGGTGGGGGAAGTCGTCATCCAAAGAAGCAAAGAAGAAGTCAGGGAGCAAGGAAAGTTTCATCGATTCATTACATCGGAAATTTAAGTTTTCATCTGAAAGTAGAGTGAATGGTAGATCTGGAGGGTCTCGAAGACCATGTAGTGATGCCATTTCGGAAAAGGGGTCTCGATCTCCTCTAGAATCAAGATCTCCTTCACCCTCCAAACAAGTTGCAAGAACTCAAAGTTTTGCTGAAAGGAGTATTTCTCAACCACTTCCACTTCCTGGTCAACATCCTGCTCATGTCGGACGTACAGATTCTGGTTTTAGTATATCACCAAAACCAAGATCAGATAAATGCTCCAAGCCATTATTGTTTCTACCTCTCCCGAGACCTCGGTGCATTGGTGGGAGGTCAAATCGTGCTGACTTTGATGATGGAGATATGAATACTGGTTCAGTTTCTAGTGATACCTCTGTTGATAGTGAAGATCCAGCTGACTCAGGTCTCCGCAGCCCTCAGGCAATTGACTATGAAAGTGGGACTAGAACTGCAGCTGGCAGTCCTTCCAGTGTGATGCTCAAGGATCAGTCCTTCACTGTGGCCCCAGTAATCTCAAGAGAGGCAAAAAAACCAGCCAACATTTCATTCATTAATCAAATTTCCCCTTCATCGCCTAAACGGAGACCTTTGAGCAGTCATGTGCCAAATCTCCAGGTACCTTATCAAGGAGCTTTCTGGAGTGCTCCTGACAGCTCCATGTCAAGTCCTTCTAGAAGTCCAATTAGAGCATTTGGAACCGAGCAAGCCGTGAACTCTGCTTTCTGGGCTCCAAAAACTTATACTGATGTCACCATAGCAGGATCTGGCCACGGCTCCAGTCCAGGTTCTGGTCACAATTCTGGGCACAATTCAATGGGAGGGGATATGTCGGGACAGTTGTTTTGGCAGCAAAGCAAGGGTAGCCCCGAGTATTCTCCAGTACCTAGTCCCAGATTGACAAGCCCTGGCCCAGGCTCAAGAATTCATAGTGGTGCTGTTACACCTATTCATCCCAGAGCAGGTGGGGCTCTCAATGATTCGCAGACAAGCTGGCCTGATGATGGGAAACAACAAAGTCACCGTTTGCCTCTTCCTCCAGTAACAATTTCAAATGCATCACCCTTTTCTCATTCAAATTCAGCAGCAACATCTCCTTCTGTGCCACGAAGTCCTGGAAGGGCAGAAAATCCAGCGAGCCCTGGTTCTCGGTGGAAAAAGGGGAAGCTGCTGGGTAGAGGCACATTTGGACATGTTTATGTCGGTTTTAATAGTGAAAGTGGCGAAATGTGTGCAATGAAGGAGGTCACATTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCAAAGCAATTAACGCAGGAAATTACTTTGTTGAGCCGTTTACGGCATCCAAACATTGTGCAGTATTATGGGTCTGAATCAGTTGGTGACAAGCTTTATATATATTTGGAGTATGTATCTGGTGGTTCTATATATAAACTTCTCCAAGACTATGGGCAATTTGGCGAACTTGCAATTCGTAGTTATACTCAACAAATCTTGTCGGGGCTTGCATATTTGCATGCTAAAAATACCGTCCACAGGGATATAAAAGGAGCAAACATACTTGTAGACCCAAATGGCCGTGTCAAGTTGGCGGACTTTGGGATGGCAAAGCATATTACCGGGCAGTCATGTCCTTTATCATTTAAGGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAGAACTCAAGTGGAGCCAACCTTGCTGTGGATATATGGAGTCTTGGGTGCACGGTTTTGGAAATGGCTACAACAAAACCACCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGGAATAGCAAGGAACTGCCAGCAATTCCAGATCACCTCTTGGATGATGGAAAGGATTTCATAAGGCAATGCTTACAGCGAAATCCACTTCATCGTCCTACAGCTGCTCAGCTCTTGGAGCATCCCTTTGTGAAATCTGCAGCACCTTTGGCAAGACCTATATTGGGCCCTGAGCCTTCTGATTCACCTGCTGGGGTTGCAAATGGAGTGAAGGCTCTGGGCATTGGGCAATCAAGAAATTTCTCCAATTTGGATTCAGATAGGCTTGCAATTCACTCATCTAGAGTTTCAAAAACTCATCACCATACCAGTGATCTCCATATTCCAAGGAACATATCATGCCCTGTATCACCCATCGGAAGCCCTCTATTGCACTCCAGGTCACCACCACACTTAAATGGAAGAATGTCACCGTCTCCTATATCTAGCCCGCGGACCACTTCGGGCTCATCCACGCCTCTCACTGGTGGCAGCGGTGCCATTCCATTTATTCACCTAAAACAGTCCATAAATTTGCAAGAGGGTTTCGGAGGCATTTCAAATCCCTCAAATGGTCTCTATGGTAATGGCCCCTCCTATCATGATTCATCTCCTGACATGTTTCGAGGGAAGCAACCAGGGTCTCCCATCTTCTCAGAATTAATGCCCTCTGAAAATGATGTTCTTGCAAAACAGTTTGTAAGGCCCGCGCATACAGAGCAGTACAATGGACAGTCAGTTTTGGCTGATCGTGTGTCTCGCCAACTCCTCAAGGATCATGTTAAGATGAACAGACTGGATTTAAGTCCAAAGTCTCCTTTGACTGGCCGGACAAATGGTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

904

Amino Acids

97.11

Weight (kDa)

9.67

Isoelectric Point (pI)

65.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	419 - 674	1.1e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	420 - 670	2.1e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63700 AT1G63700
fragaria_vesca	FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_5g02670 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920 FvH4_7g29920
malus_domestica	MD01G1205500.v1.1 MD06G1085900.v1.1 MD07G1274900.v1.1
prunus_persica	Prupe.2G298100_v2.0.a1 Prupe.2G298100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1 Prupe.5G102100_v2.0.a1
pyrus_communis	pycom01g21500 pycom06g08220 pycom07g25100
rosa_chinensis	RchiOBHm_Chr1g0377881 RchiOBHm_Chr7g0197281
rosa_laevigata	RLG00000003944 RLG00000026489
rosa_multiflora	Rmu_co8459889.1_g000001 Rmu_sc0004491.1_g000001 Rmu_sc0004824.1_g000011 Rmu_sc0010019.1_g000003 Rmu_sc0017623.1_g000004 Rmu_sc0030897.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258510 Rroxscaffold_4G00280980
rosa_rugosa	Rorug01G0405400 Rorug07G0039200
rosa_samantha	Rh1AG426400 Rh1BG382900 Rh1CG396700 Rh1DG413900 Rh7AG164200 Rh7BG166000 Rh7CG172700 Rh7DG165400
rosa_wichuraiana	Rw1G037210 Rw7G014320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1766
AarI	CACCTGC	2 cut(s)	1052, 2086
Acc36I	ACCTGC	2 cut(s)	1052, 2086
Acc65I	GGTACC	1 cut(s)	718
AccB1I	GGYRCC	3 cut(s)	718, 1753, 2366
AccB7I	CCANNNNNTGG	2 cut(s)	284, 890
AccI	GTMKAC	1 cut(s)	1653
AccII	CGCG	2 cut(s)	2323, 2579
AciI	CCGC	6 cut(s)	511, 1679, 2321, 2323, 2364, 2577
AclWI	GGATC	4 cut(s)	485, 594, 871, 2652
AcoI	YGGCCR	3 cut(s)	868, 1663, 2695
AcsI	RAATTY	6 cut(s)	98, 660, 1023, 1177, 2128, 2401
AfaI	GTAC	4 cut(s)	313, 720, 984, 2594
AflIII	ACRYGT	2 cut(s)	1291, 2487
AgsI	TTSAA	5 cut(s)	915, 1152, 1176, 2181, 2430
AjnI	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 2267, 2506
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
AluBI	AGCT	9 cut(s)	497, 557, 734, 756, 1092, 1267, 1477, 1994, 2002
AluI	AGCT	9 cut(s)	497, 557, 734, 756, 1092, 1267, 1477, 1994, 2002
Alw21I	GWGCWC	2 cut(s)	748, 1820
Alw44I	GTGCAC	1 cut(s)	1816
AlwI	GGATC	4 cut(s)	485, 594, 871, 2652
AlwNI	CAGNNNCTG	3 cut(s)	320, 866, 890
Ama87I	CYCGRG	2 cut(s)	388, 968
AoxI	GGCC	9 cut(s)	603, 868, 1009, 1094, 1663, 2056, 2458, 2573, 2695
ApaI	GGGCCC	1 cut(s)	2060
ApaLI	GTGCAC	1 cut(s)	1816
ApeKI	GCWGC	9 cut(s)	513, 554, 949, 1184, 1267, 1874, 1994, 2030, 2361
ApoI	RAATTY	6 cut(s)	98, 660, 1023, 1177, 2128, 2401
ArsI	GACNNNNNNTTYG	4 cut(s)	41, 73, 927, 959
AseI	ATTAAT	2 cut(s)	654, 2531
Asp718I	GGTACC	1 cut(s)	718
AspLEI	GCGC	1 cut(s)	2581
AspS9I	GGNCC	7 cut(s)	604, 1010, 2056, 2057, 2325, 2459, 2574
AsuC2I	CCSGG	1 cut(s)	1708
AvaI	CYCGRG	2 cut(s)	388, 968
AvaII	GGWCC	1 cut(s)	2325
AxyI	CCTNAGG	2 cut(s)	519, 1758
BaeGI	GKGCMC	3 cut(s)	909, 1820, 2060
BaeI	ACNNNNGTAYC	2 cut(s)	462, 495
BalI	TGGCCA	1 cut(s)	870
BanI	GGYRCC	3 cut(s)	718, 1753, 2366
BanII	GRGCYC	5 cut(s)	832, 1072, 1241, 2060, 2339
BbsI	GAAGAC	1 cut(s)	157
Bbv12I	GWGCWC	2 cut(s)	748, 1820
BbvI	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1861, 1981, 2042, 2373
BccI	CCATC	7 cut(s)	431, 1097, 1684, 1744, 1931, 2252, 2525
BceAI	ACGGC	5 cut(s)	794, 889, 1404, 1442, 1650
BcgI	CGANNNNNNTGC	2 cut(s)	1313, 1347
BciT130I	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 2269, 2508
BcnI	CCSGG	1 cut(s)	1708
BfaI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 2172, 2316
BfmI	CTRYAG	3 cut(s)	552, 1989, 2028
BfuAI	ACCTGC	2 cut(s)	1052, 2086
BglII	AGATCT	2 cut(s)	134, 206
BisI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1875, 1995, 2031, 2362
BlpI	GCTNAGC	1 cut(s)	1998
BlsI	GCNGC	9 cut(s)	515, 556, 951, 1186, 1269, 1876, 1996, 2032, 2363
Bme18I	GGWCC	1 cut(s)	2325
BmeT110I	CYCGRG	2 cut(s)	388, 968
BmgT120I	GGNCC	7 cut(s)	604, 1010, 2056, 2057, 2325, 2459, 2574
BmrI	ACTGGG	1 cut(s)	602
BmsI	GCATC	6 cut(s)	154, 567, 1166, 1354, 1438, 2020
BmuI	ACTGGG	1 cut(s)	602
BoxI	GACNNNNGTC	1 cut(s)	504
BpiI	GAAGAC	1 cut(s)	157
BplI	GAGNNNNNCTC	2 cut(s)	250, 282
BpmI	CTGGAG	7 cut(s)	159, 698, 760, 862, 963, 1122, 2251
Bpu10I	CCTNAGC	1 cut(s)	2061
Bpu1102I	GCTNAGC	1 cut(s)	1998
BpuEI	CTTGAG	5 cut(s)	566, 601, 1003, 1759, 2624
BpuMI	CCSGG	1 cut(s)	1708
Bsa29I	ATCGAT	1 cut(s)	81
BsaI	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2450, 2517
BsaJI	CCNNGG	9 cut(s)	395, 871, 1006, 1012, 1240, 1850, 2216, 2321, 2507
Bse21I	CCTNAGG	2 cut(s)	519, 1758
Bse3DI	GCAATG	2 cut(s)	1341, 1964
BseBI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 2269, 2508
BseCI	ATCGAT	1 cut(s)	81
BseDI	CCNNGG	9 cut(s)	395, 871, 1006, 1012, 1240, 1850, 2216, 2321, 2507
BseGI	GGATG	9 cut(s)	35, 292, 1051, 1429, 1695, 1755, 1939, 2011, 2339
BseMI	GCAATG	2 cut(s)	1341, 1964
BseMII	CTCAG	6 cut(s)	516, 533, 1749, 2012, 2052, 2538
BseRI	GAGGAG	2 cut(s)	183, 2627
BseSI	GKGCMC	3 cut(s)	909, 1820, 2060
BseXI	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1861, 1981, 2042, 2373
BseYI	CCCAGC	2 cut(s)	1270, 2081
BsgI	GTGCAG	1 cut(s)	1463
Bsh1236I	CGCG	2 cut(s)	2323, 2579
BshFI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1665, 2058, 2460, 2575, 2697
BshNI	GGYRCC	3 cut(s)	718, 1753, 2366
BshVI	ATCGAT	1 cut(s)	81
BsiHKAI	GWGCWC	2 cut(s)	748, 1820
BsiHKCI	CYCGRG	2 cut(s)	388, 968
BsiSI	CCGG	2 cut(s)	1707, 2698
BslFI	GGGAC	3 cut(s)	556, 948, 975
BsmBI	CGTCTC	1 cut(s)	2310
BsmFI	GGGAC	3 cut(s)	556, 948, 975
BsnI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1665, 2058, 2460, 2575, 2697
Bso31I	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2450, 2517
BsoBI	CYCGRG	2 cut(s)	388, 968
Bsp120I	GGGCCC	1 cut(s)	2056
Bsp1286I	GDGCHC	8 cut(s)	748, 832, 909, 1072, 1241, 1820, 2060, 2339
Bsp1720I	GCTNAGC	1 cut(s)	1998
BspACI	CCGC	6 cut(s)	511, 1679, 2321, 2323, 2364, 2577
BspANI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1665, 2058, 2460, 2575, 2697
BspCNI	CTCAG	6 cut(s)	515, 532, 1750, 2011, 2053, 2537
BspDI	ATCGAT	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	2323, 2579
BspHI	TCATGA	1 cut(s)	2470
BspMAI	CTGCAG	2 cut(s)	556, 2032
BspMI	ACCTGC	2 cut(s)	1052, 2086
BspPI	GGATC	4 cut(s)	485, 594, 871, 2652
BspT107I	GGYRCC	3 cut(s)	718, 1753, 2366
BspTNI	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2450, 2517
BsrDI	GCAATG	2 cut(s)	1341, 1964
BssECI	CCNNGG	9 cut(s)	395, 871, 1006, 1012, 1240, 1850, 2216, 2321, 2507
BssT1I	CCWWGG	2 cut(s)	1850, 2216
Bst2UI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 2269, 2508
Bst4CI	ACNGT	9 cut(s)	601, 939, 1124, 1618, 1822, 2304, 2394, 2565, 2604
Bst6I	CTCTTC	1 cut(s)	1137
BstDEI	CTNAG	7 cut(s)	502, 519, 1374, 1758, 1998, 2061, 2524
BstDSI	CCRYGG	2 cut(s)	871, 2321
BstEII	GGTNACC	1 cut(s)	2271
BstENI	CCTNNNNNAGG	2 cut(s)	726, 1011
BstF5I	GGATG	9 cut(s)	35, 292, 1051, 1429, 1695, 1755, 1939, 2011, 2339
BstFNI	CGCG	2 cut(s)	2323, 2579
BstHHI	GCGC	1 cut(s)	2581
BstMWI	GCNNNNNNNGC	9 cut(s)	827, 963, 1067, 1396, 1790, 2008, 2039, 2087, 2587
BstNI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 2269, 2508
BstNSI	RCATGY	3 cut(s)	1295, 1607, 2491
BstPAI	GACNNNNGTC	1 cut(s)	504
BstPI	GGTNACC	1 cut(s)	2271
BstSFI	CTRYAG	3 cut(s)	552, 1989, 2028
BstSLI	GKGCMC	3 cut(s)	909, 1820, 2060
BstUI	CGCG	2 cut(s)	2323, 2579
BstV1I	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1861, 1981, 2042, 2373
BstV2I	GAAGAC	1 cut(s)	157
BstX2I	RGATCY	4 cut(s)	134, 206, 490, 863
BstXI	CCANNNNNNTGG	1 cut(s)	1535
BstYI	RGATCY	4 cut(s)	134, 206, 490, 863
Bsu15I	ATCGAT	1 cut(s)	81
Bsu36I	CCTNAGG	2 cut(s)	519, 1758
BsuRI	GGCC	9 cut(s)	605, 870, 1011, 1096, 1665, 2058, 2460, 2575, 2697
BsuTUI	ATCGAT	1 cut(s)	81
BtgI	CCRYGG	2 cut(s)	871, 2321
BtgZI	GCGATG	1 cut(s)	657
BtsCI	GGATG	9 cut(s)	35, 292, 1051, 1429, 1695, 1755, 1939, 2011, 2339
BtsIMutI	CAGTG	4 cut(s)	577, 597, 2206, 2352
BveI	ACCTGC	2 cut(s)	1052, 2086
CaiI	CAGNNNCTG	3 cut(s)	320, 866, 890
CciI	TCATGA	1 cut(s)	2470
CfoI	GCGC	1 cut(s)	2581
Cfr13I	GGNCC	7 cut(s)	604, 1010, 2056, 2057, 2325, 2459, 2574
Cfr42I	CCGCGG	1 cut(s)	2324
ClaI	ATCGAT	1 cut(s)	81
Csp6I	GTAC	4 cut(s)	312, 719, 983, 2593
CviQI	GTAC	4 cut(s)	312, 719, 983, 2593
DdeI	CTNAG	7 cut(s)	502, 519, 1374, 1758, 1998, 2061, 2524
EaeI	YGGCCR	3 cut(s)	868, 1663, 2695
Eam1104I	CTCTTC	1 cut(s)	1137
EarI	CTCTTC	1 cut(s)	1137
EciI	GGCGGA	1 cut(s)	1694
Eco130I	CCWWGG	2 cut(s)	1850, 2216
Eco24I	GRGCYC	5 cut(s)	832, 1072, 1241, 2060, 2339
Eco31I	GGTCTC	7 cut(s)	150, 189, 385, 512, 679, 2450, 2517
Eco47I	GGWCC	1 cut(s)	2325
Eco81I	CCTNAGG	2 cut(s)	519, 1758
Eco88I	CYCGRG	2 cut(s)	388, 968
Eco91I	GGTNACC	1 cut(s)	2271
EcoNI	CCTNNNNNAGG	2 cut(s)	726, 1011
EcoO109I	RGGNCCY	1 cut(s)	2057
EcoO65I	GGTNACC	1 cut(s)	2271
EcoRI	GAATTC	1 cut(s)	1023
EcoRII	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 2267, 2506
EcoT14I	CCWWGG	2 cut(s)	1850, 2216
EcoT22I	ATGCAT	1 cut(s)	1159
EcoT38I	GRGCYC	5 cut(s)	832, 1072, 1241, 2060, 2339
ErhI	CCWWGG	2 cut(s)	1850, 2216
Esp3I	CGTCTC	1 cut(s)	2310
FalI	AAGNNNNNCTT	2 cut(s)	196, 228
FaqI	GGGAC	3 cut(s)	556, 948, 975
FauI	CCCGC	2 cut(s)	2328, 2584
FblI	GTMKAC	1 cut(s)	1653
Fnu4HI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1875, 1995, 2031, 2362
FokI	GGATG	9 cut(s)	22, 279, 1038, 1416, 1702, 1762, 1946, 1998, 2326
FriOI	GRGCYC	5 cut(s)	832, 1072, 1241, 2060, 2339
Fsp4HI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1875, 1995, 2031, 2362
FspBI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 2172, 2316
GlaI	GCGC	1 cut(s)	2580
GluI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1875, 1995, 2031, 2362
GsaI	CCCAGC	2 cut(s)	1274, 2085
GsuI	CTGGAG	7 cut(s)	159, 698, 760, 862, 963, 1122, 2251
HaeIII	GGCC	9 cut(s)	605, 870, 1011, 1096, 1665, 2058, 2460, 2575, 2697
HapII	CCGG	2 cut(s)	1707, 2698
HhaI	GCGC	1 cut(s)	2581
Hin6I	GCGC	1 cut(s)	2579
HinP1I	GCGC	1 cut(s)	2579
HincII	GTYRAC	1 cut(s)	290
HindII	GTYRAC	1 cut(s)	290
HindIII	AAGCTT	1 cut(s)	1475
HpaII	CCGG	2 cut(s)	1707, 2698
Hpy166II	GTNNAC	6 cut(s)	290, 814, 1424, 1621, 1654, 1818
Hpy8I	GTNNAC	6 cut(s)	290, 814, 1424, 1621, 1654, 1818
HpyCH4III	ACNGT	9 cut(s)	601, 939, 1124, 1618, 1822, 2304, 2394, 2565, 2604
HpyCH4IV	ACGT	1 cut(s)	310
HpyF10VI	GCNNNNNNNGC	9 cut(s)	827, 963, 1067, 1396, 1790, 2008, 2039, 2087, 2587
HpyF3I	CTNAG	7 cut(s)	502, 519, 1374, 1758, 1998, 2061, 2524
HpySE526I	ACGT	1 cut(s)	310
HspAI	GCGC	1 cut(s)	2579
KpnI	GGTACC	1 cut(s)	722
KspI	CCGCGG	1 cut(s)	2324
Lsp1109I	GCAGC	9 cut(s)	525, 566, 961, 1196, 1254, 1861, 1981, 2042, 2373
LweI	GCATC	6 cut(s)	154, 567, 1166, 1354, 1438, 2020
MaeI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 2172, 2316
MaeII	ACGT	1 cut(s)	310
MaeIII	GTNAC	9 cut(s)	850, 893, 1039, 1118, 1141, 1345, 1469, 2271, 2298
MboII	GAAGA	6 cut(s)	64, 162, 500, 1124, 2304, 2512
MfeI	CAATTG	1 cut(s)	525
MflI	RGATCY	4 cut(s)	134, 206, 490, 863
MhlI	GDGCHC	8 cut(s)	748, 832, 909, 1072, 1241, 1820, 2060, 2339
MlsI	TGGCCA	1 cut(s)	870
MluNI	TGGCCA	1 cut(s)	870
MlyI	GAGTC	3 cut(s)	494, 1816, 1864
MmeI	TCCRAC	1 cut(s)	286
Mox20I	TGGCCA	1 cut(s)	870
Mph1103I	ATGCAT	1 cut(s)	1159
MscI	TGGCCA	1 cut(s)	870
MslI	CAYNNNNRTG	4 cut(s)	1032, 1296, 2199, 2286
Msp20I	TGGCCA	1 cut(s)	870
MspA1I	CMGCKG	5 cut(s)	497, 557, 1994, 2323, 2364
MspI	CCGG	2 cut(s)	1707, 2698
MunI	CAATTG	1 cut(s)	525
MvaI	CCWGG	9 cut(s)	285, 716, 885, 1008, 1014, 1215, 1242, 2269, 2508
MvnI	CGCG	2 cut(s)	2323, 2579
MwoI	GCNNNNNNNGC	9 cut(s)	827, 963, 1067, 1396, 1790, 2008, 2039, 2087, 2587
NciI	CCSGG	1 cut(s)	1708
NmuCI	GTSAC	7 cut(s)	850, 893, 1118, 1345, 1469, 2271, 2298
NsiI	ATGCAT	1 cut(s)	1159
NspI	RCATGY	3 cut(s)	1295, 1607, 2491
PaeI	GCATGC	1 cut(s)	1607
PagI	TCATGA	1 cut(s)	2470
PaqCI	CACCTGC	2 cut(s)	1052, 2086
PciI	ACATGT	2 cut(s)	1291, 2487
PfeI	GAWTC	8 cut(s)	83, 200, 317, 1079, 1460, 2072, 2144, 2474
PflMI	CCANNNNNTGG	2 cut(s)	284, 890
PfoI	TCCNGGA	1 cut(s)	1213
PkrI	GCNGC	9 cut(s)	515, 556, 951, 1186, 1269, 1876, 1996, 2032, 2363
PleI	GAGTC	3 cut(s)	494, 1815, 1863
PpsI	GAGTC	3 cut(s)	494, 1815, 1863
PscI	ACATGT	2 cut(s)	1291, 2487
PshAI	GACNNNNGTC	1 cut(s)	504
PshBI	ATTAAT	2 cut(s)	654, 2531
PsiI	TTATAA	1 cut(s)	1766
Psp6I	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 2267, 2506
PspEI	GGTNACC	1 cut(s)	2271
PspFI	CCCAGC	2 cut(s)	1270, 2081
PspGI	CCWGG	9 cut(s)	283, 714, 883, 1006, 1012, 1213, 1240, 2267, 2506
PspOMI	GGGCCC	1 cut(s)	2056
PspPI	GGNCC	7 cut(s)	604, 1010, 2056, 2057, 2325, 2459, 2574
PstI	CTGCAG	2 cut(s)	556, 2032
PstNI	CAGNNNCTG	3 cut(s)	320, 866, 890
PsuI	RGATCY	4 cut(s)	134, 206, 490, 863
PvuII	CAGCTG	3 cut(s)	497, 557, 1994
RsaI	GTAC	4 cut(s)	313, 720, 984, 2594
RsaNI	GTAC	4 cut(s)	312, 719, 983, 2593
RseI	CAYNNNNRTG	4 cut(s)	1032, 1296, 2199, 2286
SacII	CCGCGG	1 cut(s)	2324
SatI	GCNGC	9 cut(s)	514, 555, 950, 1185, 1268, 1875, 1995, 2031, 2362
Sau96I	GGNCC	7 cut(s)	604, 1010, 2056, 2057, 2325, 2459, 2574
SchI	GAGTC	3 cut(s)	494, 1816, 1864
SduI	GDGCHC	8 cut(s)	748, 832, 909, 1072, 1241, 1820, 2060, 2339
SfaNI	GCATC	6 cut(s)	154, 567, 1166, 1354, 1438, 2020
SfcI	CTRYAG	3 cut(s)	552, 1989, 2028
Sfr303I	CCGCGG	1 cut(s)	2324
SgrBI	CCGCGG	1 cut(s)	2324
SinI	GGWCC	1 cut(s)	2325
SmiMI	CAYNNNNRTG	4 cut(s)	1032, 1296, 2199, 2286
SmlI	CTYRAG	5 cut(s)	581, 616, 1018, 1774, 2639
SmoI	CTYRAG	5 cut(s)	581, 616, 1018, 1774, 2639
SphI	GCATGC	1 cut(s)	1607
SsiI	CCGC	6 cut(s)	511, 1679, 2321, 2323, 2364, 2577
SspMI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 2172, 2316
StyI	CCWWGG	2 cut(s)	1850, 2216
TaaI	ACNGT	9 cut(s)	601, 939, 1124, 1618, 1822, 2304, 2394, 2565, 2604
TaiI	ACGT	1 cut(s)	313
TaqI	TCGA	4 cut(s)	81, 148, 187, 2494
TatI	WGTACW	1 cut(s)	2592
TfiI	GAWTC	8 cut(s)	83, 200, 317, 1079, 1460, 2072, 2144, 2474
TscAI	CASTG	4 cut(s)	577, 604, 2206, 2359
TseFI	GTSAC	7 cut(s)	850, 893, 1118, 1345, 1469, 2271, 2298
TseI	GCWGC	9 cut(s)	513, 554, 949, 1184, 1267, 1874, 1994, 2030, 2361
Tsp45I	GTSAC	7 cut(s)	850, 893, 1118, 1345, 1469, 2271, 2298
TspGWI	ACGGA	1 cut(s)	697
TspRI	CASTG	4 cut(s)	577, 604, 2206, 2359
Van91I	CCANNNNNTGG	2 cut(s)	284, 890
VneI	GTGCAC	1 cut(s)	1816
VpaK11BI	GGWCC	1 cut(s)	2325
VspI	ATTAAT	2 cut(s)	654, 2531
XagI	CCTNNNNNAGG	2 cut(s)	726, 1011
XapI	RAATTY	6 cut(s)	98, 660, 1023, 1177, 2128, 2401
XbaI	TCTAGA	3 cut(s)	196, 773, 2171
XceI	RCATGY	3 cut(s)	1295, 1607, 2491
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1792
XmiI	GTMKAC	1 cut(s)	1653
XspI	CTAG	7 cut(s)	197, 465, 546, 774, 987, 2172, 2316
Zsp2I	ATGCAT	1 cut(s)	1159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.