Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0002511

Physical Location & Seq

Genomic Coordinates Reverse (-)

26233872 .. 26241494

Gene Structure 7623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1154200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3357 bp

ATGTTTGCCAAGCTCTTCAACAAATCTTCACAGCAACCACCAAATTCGCAGGCAAGGGTTACACAAGCGGATTTGGATCCTCGTGTCGTTGTTCACTATGGGATCCCATCTACTTCGTCCATTCTCGCAGTTGATCGCACACAAAGCCTGTTGGCAATCGGAACACTGGATGGTAGGATAAAAGTGATCGGTGGTGATAATATCGAAGGGCTTCTTACATCTCCAAAGCCGCTGCCCTTTAAAAACTTAGAGTTCCTGCAAAATCAGGGTTTTCTAGCCAGTGTCTCAAGTGAAAATGAAATTCAGGTTTGGGATTTGGAACAGAGGCGAATGGCTTCTTCTTTACAGTGGGAATGCAATATAACTTCGTTCTCTGTTATATATGGCACTAATTACATGTATATTGGAAGCGAATATGCAATGGTCTCTGTGTTGAAGTATGATGTTGAAGATGGAAAAATAAAATTACTGCCGTACTATATTACTGCAAATTTCATAGCCGAAGCAGCTGGAATGTCAGTGCCTGATCATCTTTCTGTTGTCGGAGTTCTCCACCAACCTGGTTCTCTGGGAAACAGATTGGTAATGGCATATGAGAATGGGCTCATCATTATTTGGGATGCTTCCGAGGACCGAGTTGTTCTTGTTAGAGGTTCCAAGGACCTGAAAGTGAAGGAAAAGGCAGTTACTAATTCTCCAGATGACACAACAAAGGAGCTTTCTGATGCTACAGAAGAAAGCAAGCAGGTGGAGAAAGAAATAAGCTCTCTTTGTTGGGTATCTGACAATGGGTCGATTCTTGCCGTTGGCTATGTAGATGGTGATATAATGCTTTGGGACTTATCAACTGCTGCCTCTACCAAGGATCAGAAATCCGAAAAATTAGATAATAATGTTGCAAAGCTACAGTTATCATCCGGTGATAGAAGACTCCCTGTCATTGTTTTACACTGGTCTGCAAATAGGTTAGATAATCATCATAGGGGCCAACTCTTTGTCTATGGTGGTGATGACATTGGATCTCAAGAAGTTCTGACGGTTCTGAGCCTTGATTGGTCTTCAGGAATAGAAAGCCTGAAATGCGTTGGCCGTACAGACCTTAAACTTAATGGTTCATTTGCGGATATAGTTTTGTTACCGACTGCTGGTGCAACGGAGAATAGTGGCACATTGCTATTTGTTTTGACAAATCAGGGACAACTGCATGTCTATGACAAGGCTTGCTTGTTGGCCTTAATGTCTCAGCAAAAGGAGAAGACTGCTGTTCCAGCAGTGCAGTATCCTGTGTTCTTACCCACTATTGAACCATATATGACAGTTGCAAAGCTTTCTCTGGTGCATAGAGATGAGGAATACTCCTCAGTTTTTTCTAAGAAAGTCTTAGTTGGAAAGATTAACGTGGAATACGCTTCAACAACCGGTGGTAAAAAGTGGCCTTTGACCGGTGGTATTCCCAGCCAGCTTTGTACTGCTGAAGATTATCACGTCGAGAGATTGTATATAGCAGGATACCAAGATGGATCAGTTCGGATATGGGATGCCACATATCCAGCTCTGTCACTTAACTGTGATTTAGGACCTGAGGTAAAAGGAATCAGATCTACGGGCGCAAGTGCAAAGGTATCAGCATTGGATTTCTGTTCTGTTACTATAGGGCTAGCTGTTGGTGACGATAGCGGTCTGGTTCGTCTTTATAACCTAATAGGTGGTTCAGAAGAGACCAGAGTGCACTTTGTGACAAAAACTGATAAGGAAGTTAAAAATTTACAACAAGGAAAGGGGCTTCAGTGCACGGCCATGTTTTCTATTCTTGATTCACCTATATGCATCCTACAATATGCAAACTTTGGAGGCCGACTTGCTGTGGGTTTTGAATGTGGCCGGGTTGCGATGCTTGATATTAGTACAATGTCAGTTTTGTTTCTTACAGACAGTGTATCCAACTCAAGTTCCCCAGTCACCTGTCTGGCTGTAAAATCATTTTCAGATACCAGTAACACATCACATTGTCCAGAGGACTCTGCGTCCAAGAGTTTGGATGATCCTGGAAATGGGTTGATAATCGTTATGACTAGAAATGCGCATATTGTTGTTATAGACGGTGCCTCTGGCAATATGGTTAGCTCTTGGACTATGAATTTAAAAAAGGAGCTCACTGCGGTTTCAATGTACATTTTTGAGGATGGCGATTTTTTATGTGATGTTCCAAGTGCAAAGCAATCGTTGGACGTTTCTCAGATAACTGAAGCTAAAAAGGATCATGCACAAAATGATGCCGACCCTGCAAGCACGCAGCCGGAAGTTGAGCAGGACACCACTAGCAAAACTGCATATTTTGTGCAGAGATCAACGAACACAACTGTTTTACTTTGTTGTGATAATGCATTACAGATGTGCTCATTGAAGTCTGTGATTGAGGGTGACAGTAACTCCACTCAGAAGGTGGACCTTGCAAAACCATGTTGCTGGACTACAGCCTTCAAGAAAGACGGGAAAGATGGTGGACTGGTTGTATTCTATCAGACAGGAGTTTTTGAAATAAGGTCTTTTCCAAATCTTGAAGTGGTGGGAGGATTTTCATTAATGTCGATTCTGAGATGGAACTTCAAGACCAACATGGACAAGACAATCTGCTCCTCTGATCATGGGCAAATTATTCTGGTAAATGGGTGTGAATTAGCTTGTGTATCTCTTTTGTCCCATGAAAATGACTTCAGGATTCCTGAATCGTTGCCTTGTCTTCACGATAAAGTGATTGCAGCTGCTACGGATGTCATTGCTAGTTTATCTGTTAGCCAGAAACAGATTGGTGTCCCTGGTATTTTAGGCGGTATCATCAAGGGCTTAAAAGCGGGTAAAGCGGAGCAAGACATGCACCCAGCAAATCATGAGAAGTATTGTGAGAATTTAGAGAGCTTATTTTCAAGTCCGCCGTTTTTAAAACCTTCCCAAGATGGGAAGGATGATCAAGAAATTCTGGAGCTTCATATAGACGATCTTGTAATTGACGGACCTCTCATAATTGATGGACCTGCTCCCCCTTCTTCAATTGAGAAGAACAAGAATGAAAATAAAGACAAGGGAACAGAGAAGGAAAGATTATTTGAAGGTGCGACAAGTGATACAAAACCAAAAATGAGGACAGCTGAAGAAATCAAGGCTAAATATAGAGACATTGGGGATGTGTCTGCAGGTGCAGCAGCTGCACTTGCGAGAGATAAGCTTGCAGAACGCCAGGAAAAACTTGAGAAACTCAGCCAAAACTCAGAAGAACTGCGAAGCGGAGCTGAGGACTTCGCGTCAATGGCAAGGGAGCTCGCCAAGAGAATGGAAAATCGAAAATGGTGGCAAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0002791 GO:0002792 GO:0002793 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008047 GO:0008150 GO:0010646 GO:0010648 GO:0010817 GO:0016020 GO:0017016 GO:0017137 GO:0017157 GO:0019899 GO:0019905 GO:0023051 GO:0023057 GO:0030234 GO:0030695 GO:0031267 GO:0032879 GO:0032880 GO:0033500 GO:0042592 GO:0042593 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0046676 GO:0046883 GO:0046888 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048878 GO:0050708 GO:0050709 GO:0050714 GO:0050789 GO:0050790 GO:0050794 GO:0050796 GO:0051020 GO:0051046 GO:0051047 GO:0051048 GO:0051049 GO:0051050 GO:0051051 GO:0051222 GO:0051223 GO:0051224 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071944 GO:0090087 GO:0090276 GO:0090278 GO:0098772 GO:1903530 GO:1903531 GO:1903532 GO:1904950 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANAPC4_WD40 Synaptobrevin

Protein Analysis

1119

Amino Acids

122.01

Weight (kDa)

5.13

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_WDHD1_1st	PF24817	42 - 214	9.1e-06	WDHD1 first WD40 domain
Synaptobrevin	PF00957	1073 - 1115	7.4e-06	Synaptobrevin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05570 AT5G05570
fragaria_vesca	FvH4_6g11290 FvH4_6g11290 FvH4_6g11290 FvH4_7g24600 FvH4_7g24600
malus_domestica	MD01G1154200.v1.1 MD04G1155600.v1.1 MD07G1223200.v1.1 MD12G1168800.v1.1
prunus_persica	Prupe.2G251300_v2.0.a1 Prupe.6G279100_v2.0.a1 Prupe.6G279100_v2.0.a1
pyrus_communis	pycom01g17150 pycom04g14030 pycom12g16030
rosa_chinensis	RchiOBHm_Chr1g0370431 RchiOBHm_Chr3g0462831
rosa_laevigata	RLG00000024829 RLG00000027044
rosa_multiflora	Rmu_sc0000766.1_g000011 Rmu_sc0005656.1_g000008 Rmu_sc0035228.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286580 Rroxscaffold_6G00417170
rosa_rugosa	Rorug01G0356400 Rorug01G0356500 Rorug01G0356600 Rorug03G0059500 Rorug03G0059500
rosa_samantha	Rh1AG364900 Rh1BG328100 Rh1CG341100 Rh1DG358400 Rh3AG117600 Rh3BG121400 Rh3CG124300 Rh3DG123000
rosa_wichuraiana	Rw1G032160 Rw3G009970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1695
AarI	CACCTGC	2 cut(s)	736, 3182
Acc16I	TGCGCA	1 cut(s)	2082
Acc36I	ACCTGC	3 cut(s)	736, 3040, 3182
AccB1I	GGYRCC	1 cut(s)	2102
AccII	CGCG	1 cut(s)	3299
AclWI	GGATC	9 cut(s)	71, 84, 97, 110, 873, 1027, 1528, 2036, 2265
AcoI	YGGCCR	3 cut(s)	1087, 1794, 1879
AcsI	RAATTY	7 cut(s)	43, 300, 490, 1762, 2137, 2905, 2973
AcuI	CTGAAG	6 cut(s)	1044, 1494, 1769, 2265, 2698, 3168
AdeI	CACNNNGTG	1 cut(s)	1735
AfaI	GTAC	5 cut(s)	476, 1093, 1468, 1906, 2171
AfiI	CCNNNNNNNGG	4 cut(s)	1145, 1442, 2051, 2955
AflIII	ACRYGT	1 cut(s)	396
AgeI	ACCGGT	2 cut(s)	1418, 1442
AhdI	GACNNNNNGTC	4 cut(s)	790, 935, 2023, 3298
AjiI	CACGTC	1 cut(s)	1486
AjnI	CCWGG	4 cut(s)	559, 2044, 2815, 3234
Alw21I	GWGCWC	5 cut(s)	1731, 1793, 2154, 2399, 3318
Alw26I	GTCTC	5 cut(s)	289, 430, 1245, 1712, 3165
Alw44I	GTGCAC	2 cut(s)	1727, 1789
AlwI	GGATC	9 cut(s)	71, 84, 97, 110, 873, 1027, 1528, 2036, 2265
AlwNI	CAGNNNCTG	2 cut(s)	524, 3203
AoxI	GGCC	7 cut(s)	985, 1087, 1230, 1433, 1794, 1852, 1879
ApaLI	GTGCAC	2 cut(s)	1727, 1789
ApeKI	GCWGC	9 cut(s)	232, 506, 851, 2293, 2759, 2762, 3197, 3200, 3203
ApoI	RAATTY	7 cut(s)	43, 300, 490, 1762, 2137, 2905, 2973
AseI	ATTAAT	1 cut(s)	2582
AsiGI	ACCGGT	2 cut(s)	1418, 1442
Asp700I	GAANNNNTTC	2 cut(s)	210, 334
AspLEI	GCGC	2 cut(s)	1610, 2083
AspS9I	GGNCC	7 cut(s)	631, 661, 985, 1577, 2446, 3011, 3029
AsuC2I	CCSGG	1 cut(s)	1883
AsuHPI	GGTGA	8 cut(s)	206, 833, 932, 1019, 1679, 1809, 1951, 2432
AsuNHI	GCTAGC	1 cut(s)	1657
AvaII	GGWCC	6 cut(s)	631, 661, 1577, 2446, 3011, 3029
AxyI	CCTNAGG	1 cut(s)	1581
BaeGI	GKGCMC	2 cut(s)	1731, 1793
BamHI	GGATCC	2 cut(s)	76, 102
BanI	GGYRCC	1 cut(s)	2102
BanII	GRGCYC	3 cut(s)	606, 2154, 3318
BauI	CACGAG	1 cut(s)	81
BbsI	GAAGAC	4 cut(s)	934, 1050, 1262, 2732
Bbv12I	GWGCWC	5 cut(s)	1731, 1793, 2154, 2399, 3318
BbvCI	CCTCAGC	1 cut(s)	3288
BbvI	GCAGC	9 cut(s)	219, 518, 838, 2305, 2749, 2771, 3190, 3209, 3212
BceAI	ACGGC	5 cut(s)	457, 788, 1074, 1809, 2917
BcgI	CGANNNNNNTGC	2 cut(s)	2202, 2236
BciT130I	CCWGG	4 cut(s)	561, 2046, 2817, 3236
BciVI	GTATCC	3 cut(s)	1290, 1502, 1948
BclI	TGATCA	3 cut(s)	526, 2641, 2965
BcnI	CCSGG	1 cut(s)	1883
BcoDI	GTCTC	5 cut(s)	289, 430, 1245, 1712, 3165
BfaI	CTAG	5 cut(s)	275, 1658, 2073, 2319, 2781
BfmI	CTRYAG	5 cut(s)	729, 905, 1650, 2472, 3189
BfuAI	ACCTGC	3 cut(s)	736, 3040, 3182
BfuI	GTATCC	3 cut(s)	1290, 1502, 1948
BglII	AGATCT	1 cut(s)	1598
Bme1390I	CCNGG	5 cut(s)	561, 1883, 2046, 2817, 3236
Bme18I	GGWCC	6 cut(s)	631, 661, 1577, 2446, 3011, 3029
BmeRI	GACNNNNNGTC	4 cut(s)	790, 935, 2023, 3298
BmgBI	CACGTC	1 cut(s)	1486
BmgT120I	GGNCC	7 cut(s)	631, 661, 985, 1577, 2446, 3011, 3029
BmiI	GGNNCC	5 cut(s)	78, 104, 655, 986, 2104
BmrFI	CCNGG	5 cut(s)	561, 1883, 2046, 2817, 3236
BmrI	ACTGGG	1 cut(s)	1949
BmsI	GCATC	6 cut(s)	610, 715, 1528, 1836, 1881, 2263
BmtI	GCTAGC	1 cut(s)	1661
BmuI	ACTGGG	1 cut(s)	1949
BpiI	GAAGAC	4 cut(s)	934, 1050, 1262, 2732
BplI	GAGNNNNNCTC	2 cut(s)	1340, 1372
BpmI	CTGGAG	2 cut(s)	681, 2999
Bpu10I	CCTNAGC	1 cut(s)	3288
BpuEI	CTTGAG	4 cut(s)	271, 1008, 1930, 3266
BpuMI	CCSGG	1 cut(s)	1883
BsaBI	GATNNNNATC	2 cut(s)	75, 975
BsaI	GGTCTC	2 cut(s)	430, 1712
BsaJI	CCNNGG	4 cut(s)	627, 657, 861, 2815
BsaWI	WCCGGW	3 cut(s)	917, 1418, 1442
BsaXI	ACNNNNNCTCC	4 cut(s)	679, 709, 2414, 2444
Bsc4I	CCNNNNNNNGG	4 cut(s)	1145, 1442, 2051, 2955
Bse118I	RCCGGY	2 cut(s)	1418, 1442
Bse1I	ACTGG	6 cut(s)	171, 279, 956, 1955, 1992, 2511
Bse21I	CCTNAGG	1 cut(s)	1581
Bse3DI	GCAATG	3 cut(s)	426, 1169, 2775
Bse8I	GATNNNNATC	2 cut(s)	75, 975
BseBI	CCWGG	4 cut(s)	561, 2046, 2817, 3236
BseDI	CCNNGG	4 cut(s)	627, 657, 861, 2815
BseJI	GATNNNNATC	2 cut(s)	75, 975
BseLI	CCNNNNNNNGG	4 cut(s)	1145, 1442, 2051, 2955
BseMI	GCAATG	3 cut(s)	426, 1169, 2775
BseNI	ACTGG	6 cut(s)	171, 279, 956, 1955, 1992, 2511
BseRI	GAGGAG	2 cut(s)	1348, 2626
BseSI	GKGCMC	2 cut(s)	1731, 1793
BseXI	GCAGC	9 cut(s)	219, 518, 838, 2305, 2749, 2771, 3190, 3209, 3212
BseYI	CCCAGC	2 cut(s)	1454, 2878
BsgI	GTGCAG	4 cut(s)	1295, 2360, 3189, 3216
Bsh1236I	CGCG	1 cut(s)	3299
BshFI	GGCC	7 cut(s)	987, 1089, 1232, 1435, 1796, 1854, 1881
BshNI	GGYRCC	1 cut(s)	2102
BshTI	ACCGGT	2 cut(s)	1418, 1442
BsiHKAI	GWGCWC	5 cut(s)	1731, 1793, 2154, 2399, 3318
BsiSI	CCGG	5 cut(s)	918, 1419, 1443, 1882, 2297
BslFI	GGGAC	4 cut(s)	851, 1209, 2683, 2798
BslI	CCNNNNNNNGG	4 cut(s)	1145, 1442, 2051, 2955
BsmAI	GTCTC	5 cut(s)	289, 430, 1245, 1712, 3165
BsmFI	GGGAC	4 cut(s)	851, 1209, 2683, 2798
BsmI	GAATGC	1 cut(s)	359
BsnI	GGCC	7 cut(s)	987, 1089, 1232, 1435, 1796, 1854, 1881
Bso31I	GGTCTC	2 cut(s)	430, 1712
Bsp1286I	GDGCHC	6 cut(s)	606, 1731, 1793, 2154, 2399, 3318
Bsp1407I	TGTACA	1 cut(s)	2169
BspANI	GGCC	7 cut(s)	987, 1089, 1232, 1435, 1796, 1854, 1881
BspFNI	CGCG	1 cut(s)	3299
BspHI	TCATGA	1 cut(s)	2887
BspLI	GGNNCC	5 cut(s)	78, 104, 655, 986, 2104
BspMAI	CTGCAG	1 cut(s)	3193
BspMI	ACCTGC	3 cut(s)	736, 3040, 3182
BspOI	GCTAGC	1 cut(s)	1661
BspPI	GGATC	9 cut(s)	71, 84, 97, 110, 873, 1027, 1528, 2036, 2265
BspQI	GCTCTTC	1 cut(s)	20
BspT107I	GGYRCC	1 cut(s)	2102
BspTNI	GGTCTC	2 cut(s)	430, 1712
BsrDI	GCAATG	3 cut(s)	426, 1169, 2775
BsrFI	RCCGGY	2 cut(s)	1418, 1442
BsrGI	TGTACA	1 cut(s)	2169
BsrI	ACTGG	6 cut(s)	171, 279, 956, 1955, 1992, 2511
BssAI	RCCGGY	2 cut(s)	1418, 1442
BssECI	CCNNGG	4 cut(s)	627, 657, 861, 2815
BssSI	CACGAG	1 cut(s)	81
BssT1I	CCWWGG	2 cut(s)	657, 861
Bst2BI	CACGAG	1 cut(s)	81
Bst2UI	CCWGG	4 cut(s)	561, 2046, 2817, 3236
Bst4CI	ACNGT	9 cut(s)	348, 909, 1039, 1318, 1568, 1934, 2102, 2362, 2426
Bst6I	CTCTTC	2 cut(s)	20, 1710
BstAPI	GCANNNNNTGC	2 cut(s)	2872, 3203
BstAUI	TGTACA	1 cut(s)	2169
BstC8I	GCNNGC	9 cut(s)	51, 743, 1222, 1460, 1659, 2287, 2291, 3225, 3318
BstFNI	CGCG	1 cut(s)	3299
BstHHI	GCGC	2 cut(s)	1610, 2083
BstMAI	GTCTC	5 cut(s)	289, 430, 1245, 1712, 3165
BstNI	CCWGG	4 cut(s)	561, 2046, 2817, 3236
BstNSI	RCATGY	3 cut(s)	400, 1208, 2875
BstSCI	CCNGG	5 cut(s)	559, 1881, 2044, 2815, 3234
BstSFI	CTRYAG	5 cut(s)	729, 905, 1650, 2472, 3189
BstSLI	GKGCMC	2 cut(s)	1731, 1793
BstUI	CGCG	1 cut(s)	3299
BstV1I	GCAGC	9 cut(s)	219, 518, 838, 2305, 2749, 2771, 3190, 3209, 3212
BstV2I	GAAGAC	4 cut(s)	934, 1050, 1262, 2732
BstX2I	RGATCY	4 cut(s)	76, 102, 1019, 1598
BstXI	CCANNNNNNTGG	4 cut(s)	560, 2035, 2466, 3328
BstYI	RGATCY	4 cut(s)	76, 102, 1019, 1598
Bsu36I	CCTNAGG	1 cut(s)	1581
BsuI	GTATCC	3 cut(s)	1290, 1502, 1948
BsuRI	GGCC	7 cut(s)	987, 1089, 1232, 1435, 1796, 1854, 1881
BtgZI	GCGATG	1 cut(s)	1904
BtrI	CACGTC	1 cut(s)	1486
BtsI	GCAGTG	2 cut(s)	1278, 2154
BtsIMutI	CAGTG	9 cut(s)	164, 286, 353, 525, 949, 1278, 1793, 1939, 2154
BveI	ACCTGC	3 cut(s)	736, 3040, 3182
Cac8I	GCNNGC	9 cut(s)	51, 743, 1222, 1460, 1659, 2287, 2291, 3225, 3318
CaiI	CAGNNNCTG	2 cut(s)	524, 3203
CciI	TCATGA	1 cut(s)	2887
CfoI	GCGC	2 cut(s)	1610, 2083
Cfr10I	RCCGGY	2 cut(s)	1418, 1442
Cfr13I	GGNCC	7 cut(s)	631, 661, 985, 1577, 2446, 3011, 3029
CseI	GACGC	2 cut(s)	2013, 3288
CsiI	ACCWGGT	1 cut(s)	559
Csp6I	GTAC	5 cut(s)	475, 1092, 1467, 1905, 2170
CspAI	ACCGGT	2 cut(s)	1418, 1442
CviQI	GTAC	5 cut(s)	475, 1092, 1467, 1905, 2170
DraI	TTTAAA	3 cut(s)	241, 2142, 2940
DraIII	CACNNNGTG	1 cut(s)	1735
DriI	GACNNNNNGTC	4 cut(s)	790, 935, 2023, 3298
EaeI	YGGCCR	3 cut(s)	1087, 1794, 1879
Eam1104I	CTCTTC	2 cut(s)	20, 1710
Eam1105I	GACNNNNNGTC	4 cut(s)	790, 935, 2023, 3298
EarI	CTCTTC	2 cut(s)	20, 1710
EciI	GGCGGA	1 cut(s)	2919
Ecl136II	GAGCTC	2 cut(s)	2152, 3316
Eco130I	CCWWGG	2 cut(s)	657, 861
Eco24I	GRGCYC	3 cut(s)	606, 2154, 3318
Eco31I	GGTCTC	2 cut(s)	430, 1712
Eco47I	GGWCC	6 cut(s)	631, 661, 1577, 2446, 3011, 3029
Eco53kI	GAGCTC	2 cut(s)	2152, 3316
Eco57I	CTGAAG	6 cut(s)	1044, 1494, 1769, 2265, 2698, 3168
Eco81I	CCTNAGG	1 cut(s)	1581
EcoICRI	GAGCTC	2 cut(s)	2152, 3316
EcoO109I	RGGNCCY	2 cut(s)	661, 1577
EcoRII	CCWGG	4 cut(s)	559, 2044, 2815, 3234
EcoT14I	CCWWGG	2 cut(s)	657, 861
EcoT22I	ATGCAT	2 cut(s)	1829, 2386
EcoT38I	GRGCYC	3 cut(s)	606, 2154, 3318
ErhI	CCWWGG	2 cut(s)	657, 861
FalI	AAGNNNNNCTT	6 cut(s)	198, 230, 1208, 1240, 1364, 1396
FaqI	GGGAC	4 cut(s)	851, 1209, 2683, 2798
FauI	CCCGC	1 cut(s)	2845
FauNDI	CATATG	1 cut(s)	592
FbaI	TGATCA	3 cut(s)	526, 2641, 2965
FriOI	GRGCYC	3 cut(s)	606, 2154, 3318
FspAI	RTGCGCAY	1 cut(s)	2082
FspBI	CTAG	5 cut(s)	275, 1658, 2073, 2319, 2781
FspI	TGCGCA	1 cut(s)	2082
GlaI	GCGC	2 cut(s)	1609, 2082
GsaI	CCCAGC	2 cut(s)	1458, 2882
GsuI	CTGGAG	2 cut(s)	681, 2999
HaeIII	GGCC	7 cut(s)	987, 1089, 1232, 1435, 1796, 1854, 1881
HapII	CCGG	5 cut(s)	918, 1419, 1443, 1882, 2297
HgaI	GACGC	2 cut(s)	2013, 3288
HhaI	GCGC	2 cut(s)	1610, 2083
Hin6I	GCGC	2 cut(s)	1608, 2081
HinP1I	GCGC	2 cut(s)	1608, 2081
HindIII	AAGCTT	2 cut(s)	1325, 3221
HinfI	GANTC	8 cut(s)	796, 930, 1593, 1814, 2018, 2590, 2719, 2726
HpaII	CCGG	5 cut(s)	918, 1419, 1443, 1882, 2297
HphI	GGTGA	8 cut(s)	206, 833, 932, 1019, 1679, 1809, 1951, 2432
Hpy166II	GTNNAC	5 cut(s)	94, 1729, 1791, 2446, 2504
Hpy8I	GTNNAC	5 cut(s)	94, 1729, 1791, 2446, 2504
Hpy99I	CGWCG	1 cut(s)	1490
HpyAV	CCTTC	9 cut(s)	200, 667, 2434, 2488, 2953, 2955, 3051, 3085, 3101
HpyCH4III	ACNGT	9 cut(s)	348, 909, 1039, 1318, 1568, 1934, 2102, 2362, 2426
HpyCH4IV	ACGT	3 cut(s)	1398, 1485, 2229
HpySE526I	ACGT	3 cut(s)	1398, 1485, 2229
HspAI	GCGC	2 cut(s)	1608, 2081
Ksp22I	TGATCA	3 cut(s)	526, 2641, 2965
LguI	GCTCTTC	1 cut(s)	20
LmnI	GCTCC	8 cut(s)	715, 2149, 2639, 2863, 2980, 3040, 3284, 3313
Lsp1109I	GCAGC	9 cut(s)	219, 518, 838, 2305, 2749, 2771, 3190, 3209, 3212
LweI	GCATC	6 cut(s)	610, 715, 1528, 1836, 1881, 2263
MabI	ACCWGGT	1 cut(s)	559
MaeI	CTAG	5 cut(s)	275, 1658, 2073, 2319, 2781
MaeII	ACGT	3 cut(s)	1398, 1485, 2229
MfeI	CAATTG	1 cut(s)	3048
MflI	RGATCY	4 cut(s)	76, 102, 1019, 1598
MhlI	GDGCHC	6 cut(s)	606, 1731, 1793, 2154, 2399, 3318
MlyI	GAGTC	2 cut(s)	924, 2012
MmeI	TCCRAC	4 cut(s)	523, 1366, 1965, 2205
Mph1103I	ATGCAT	2 cut(s)	1829, 2386
MroXI	GAANNNNTTC	2 cut(s)	210, 334
MslI	CAYNNNNRTG	5 cut(s)	1209, 1344, 1796, 1822, 2706
MspA1I	CMGCKG	5 cut(s)	232, 509, 2762, 3146, 3203
MspI	CCGG	5 cut(s)	918, 1419, 1443, 1882, 2297
MspR9I	CCNGG	5 cut(s)	561, 1883, 2046, 2817, 3236
MunI	CAATTG	1 cut(s)	3048
Mva1269I	GAATGC	1 cut(s)	359
MvaI	CCWGG	4 cut(s)	561, 2046, 2817, 3236
MvnI	CGCG	1 cut(s)	3299
NciI	CCSGG	1 cut(s)	1883
NdeI	CATATG	1 cut(s)	592
NheI	GCTAGC	1 cut(s)	1657
NlaIV	GGNNCC	5 cut(s)	78, 104, 655, 986, 2104
NmuCI	GTSAC	5 cut(s)	1557, 1667, 1735, 1957, 2420
NsbI	TGCGCA	1 cut(s)	2082
NsiI	ATGCAT	2 cut(s)	1829, 2386
NspI	RCATGY	3 cut(s)	400, 1208, 2875
PagI	TCATGA	1 cut(s)	2887
PaqCI	CACCTGC	2 cut(s)	736, 3182
PciI	ACATGT	1 cut(s)	396
PciSI	GCTCTTC	1 cut(s)	20
PctI	GAATGC	1 cut(s)	359
PdmI	GAANNNNTTC	2 cut(s)	210, 334
PfeI	GAWTC	6 cut(s)	796, 1593, 1814, 2590, 2719, 2726
PfoI	TCCNGGA	1 cut(s)	2044
PinAI	ACCGGT	2 cut(s)	1418, 1442
PleI	GAGTC	2 cut(s)	924, 2012
PpsI	GAGTC	2 cut(s)	924, 2012
PpuMI	RGGWCCY	2 cut(s)	661, 1577
PscI	ACATGT	1 cut(s)	396
PshBI	ATTAAT	1 cut(s)	2582
PsiI	TTATAA	1 cut(s)	1695
Psp124BI	GAGCTC	2 cut(s)	2154, 3318
Psp5II	RGGWCCY	2 cut(s)	661, 1577
Psp6I	CCWGG	4 cut(s)	559, 2044, 2815, 3234
PspFI	CCCAGC	2 cut(s)	1454, 2878
PspGI	CCWGG	4 cut(s)	559, 2044, 2815, 3234
PspN4I	GGNNCC	5 cut(s)	78, 104, 655, 986, 2104
PspPI	GGNCC	7 cut(s)	631, 661, 985, 1577, 2446, 3011, 3029
PspPPI	RGGWCCY	2 cut(s)	661, 1577
PsrI	GAACNNNNNNTAC	2 cut(s)	1271, 1303
PstI	CTGCAG	1 cut(s)	3193
PstNI	CAGNNNCTG	2 cut(s)	524, 3203
PsuI	RGATCY	4 cut(s)	76, 102, 1019, 1598
PvuII	CAGCTG	4 cut(s)	509, 2762, 3146, 3203
RsaI	GTAC	5 cut(s)	476, 1093, 1468, 1906, 2171
RsaNI	GTAC	5 cut(s)	475, 1092, 1467, 1905, 2170
RseI	CAYNNNNRTG	5 cut(s)	1209, 1344, 1796, 1822, 2706
SacI	GAGCTC	2 cut(s)	2154, 3318
SapI	GCTCTTC	1 cut(s)	20
Sau96I	GGNCC	7 cut(s)	631, 661, 985, 1577, 2446, 3011, 3029
SchI	GAGTC	2 cut(s)	924, 2012
ScrFI	CCNGG	5 cut(s)	561, 1883, 2046, 2817, 3236
SduI	GDGCHC	6 cut(s)	606, 1731, 1793, 2154, 2399, 3318
SexAI	ACCWGGT	1 cut(s)	559
SfaNI	GCATC	6 cut(s)	610, 715, 1528, 1836, 1881, 2263
SfcI	CTRYAG	5 cut(s)	729, 905, 1650, 2472, 3189
SinI	GGWCC	6 cut(s)	631, 661, 1577, 2446, 3011, 3029
SmiMI	CAYNNNNRTG	5 cut(s)	1209, 1344, 1796, 1822, 2706
SmlI	CTYRAG	4 cut(s)	286, 1023, 1945, 3245
SmoI	CTYRAG	4 cut(s)	286, 1023, 1945, 3245
SspMI	CTAG	5 cut(s)	275, 1658, 2073, 2319, 2781
SstI	GAGCTC	2 cut(s)	2154, 3318
StyD4I	CCNGG	5 cut(s)	559, 1881, 2044, 2815, 3234
StyI	CCWWGG	2 cut(s)	657, 861
TaaI	ACNGT	9 cut(s)	348, 909, 1039, 1318, 1568, 1934, 2102, 2362, 2426
TaiI	ACGT	3 cut(s)	1401, 1488, 2232
TaqI	TCGA	5 cut(s)	204, 794, 1488, 2588, 3337
TaqII	GACCGA	1 cut(s)	648
TatI	WGTACW	3 cut(s)	1466, 1904, 2169
TauI	GCSGC	1 cut(s)	232
TfiI	GAWTC	6 cut(s)	796, 1593, 1814, 2590, 2719, 2726
TscAI	CASTG	9 cut(s)	171, 286, 353, 525, 956, 1278, 1793, 1939, 2161
TseFI	GTSAC	5 cut(s)	1557, 1667, 1735, 1957, 2420
TseI	GCWGC	9 cut(s)	232, 506, 851, 2293, 2759, 2762, 3197, 3200, 3203
Tsp45I	GTSAC	5 cut(s)	1557, 1667, 1735, 1957, 2420
TspDTI	ATGAA	8 cut(s)	312, 484, 1104, 2150, 2568, 2718, 2975, 3081
TspGWI	ACGGA	3 cut(s)	1169, 2783, 3024
TspRI	CASTG	9 cut(s)	171, 286, 353, 525, 956, 1278, 1793, 1939, 2161
VneI	GTGCAC	2 cut(s)	1727, 1789
VpaK11BI	GGWCC	6 cut(s)	631, 661, 1577, 2446, 3011, 3029
VspI	ATTAAT	1 cut(s)	2582
XapI	RAATTY	7 cut(s)	43, 300, 490, 1762, 2137, 2905, 2973
XceI	RCATGY	3 cut(s)	400, 1208, 2875
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2440, 2804
XmnI	GAANNNNTTC	2 cut(s)	210, 334
XspI	CTAG	5 cut(s)	275, 1658, 2073, 2319, 2781
Zsp2I	ATGCAT	2 cut(s)	1829, 2386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.