Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002511

Physical Location & Seq

Genomic Coordinates Reverse (-)

60385542 .. 60393795

Gene Structure 8254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G032160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3231 bp

ATGTTGGCTAAACTCTTCAAAAGACCCTCACAAAAACAACACCATCCTCAGGCAAGGGTGTCACAAGCTGATTTCGATCCAAGAATTGTTTTTCACTATGGGATTCCATCTACTGCATCGATTCTCGCACTTGATCGCACGCAGAGCTTGCTGGCAATTGGAACCCTGGATGGGAGGATAAAAGTGATCGGTGGCGATAATATTGAAGGGCTTCTGATATCTCCTGAGCCATTGGCCTTTAAATACTTGGAGTTCTTAGAAAATCAAGGTTTTTTAGCTAGTGTCTCAAGTGAAAATGAAATTCAGGTTTGGGATTTGGAACAGAAGCAAATAGCCGGTTCTTTACAGTGGGAATGCAATATAACTGCCTTCTCTGTTATTTATGGCACCAATTACATGTATATTGGAAGCGAATATGCAATGGTGTCTATGGTGAAGTATGATGCTGAAGATCGAAAAATCAATTTACTGCCATATTATATTACTGCAAACTTCATAGCTGAAGCAGCTGGAATGTCATTGCCTGATAATCTTTCTGTTGTTGGAGTTCTCCATCAACCTATTGTGCTTGTAAGAGGTTCCAAGGACCTGCAAGTGAAGGAAGAAACAGTCCATAATTCTTTTGAAGGCACAAGAACTGAGCTGACTGATGCTACATCAGACAGCAAACAGGTGGAGAAAGAGATAAGCTCTCTTTGTTGGGTATGCGATGATGGGTCAAGTCTTGCTGTTGGCTATGTAGATGGTGATATAATGTTTTGGGATATATCAACTGCTGAGTCTACCAAGGATCATAGATCTAAAAAGTTAGCTAACAATGTTGCGAAGCTAGAGTTATCATCAGATGACAAGAGACTCCCTGTCATAGTTTTACACTGGTCTGCAAATAGGTTAAGTCATCATCCTAGGGGCCAACTCTTTGTTTATGGAGGTGAAGGAATTGGGTCTGAAGAAGTTCTCACGGTTCTGAGCGTGGATTGGTCTTCAGGAATAGAAAGTCTGAAATGCATAGGTCGTGTGGACCTTACACTTGTTGGTTCATTTGCAGATATGATTTTACTTCCAGCTGCTGGTGCAATGGAGAACGGTGACACATTGCTATTCACTTTGACAAATCAGGGACAACTGCATGTCTATGACAAGGCTTGCTGGTCTGCCTTAATATCTCACCAAAAGAAAAGGACTGATGGGACTGCAGTGCAGTATCCTATGTTTATACCTACTACTGAACCGTGTATGACAGTGGCAAAGCTTGCTTTGGTGGATAGAGATGGGAAATACTCCTCAGCTTTGTCCAAGGTAGAAGTTTCAGTTGACAAGTCTACTGCGAAACACACTTTGAAGAAGGGGGGTGCAAAGTGGCCTTTGACTGGTGGTGTTCCCAGCCAACTTTCTGATGCTGAAAATTTTCATGTCGAGAGACTATATGTAGCAGGATATCAAGATGGATCTGTTCGAATATGGGATGCCACCTATCCAACTCCGTCGCTTATATATGCTATAGGTCCTGAGGTAAAAGGCATCAGATCTACAGGTGCAAATGGAACAGTCTCAGCATTGGAATTTTGTTCTCTTACTTTAAAATTAGCTATTGGTGATGTGTGTGGTCTGGTTCGTCTATATAAACTAATTGGGAGTTCAGACGAGACAGAATTGCACTTTGTGACAAAAACAGAGAAGGAAGTTTATACTTCACAACAAGGTAATGGGCCTCGGTGCACAGCTGTGTTTTCTATTCTTGATTCTCCTATATCCATACTACAATATGCAAATTTTGGAGCAAGACTTACTGTGGGATATGAATGTGGCCGGACTTTGAGTTATTCTGGAAATGAGTTGGCAATCCCAAAAGACTCTGAATCCAAGAATGAGACTGAACCTGAACATGGAAAGAGTTTAAAAGATCCTGAATCCAAGACTTTGAGTGATTCTGAAAATGGGTTGGCGTTCATTATGACCAGAAATGCACATTTTGTTATTTTAGATAGTGCCACTGGCAATATGATCAGGTCTTGGCCCTTGCATCCAAAAATGGATTCTACTGCGATTTCGATGTACATTATAGAGGATGGTGATGTTTTATTTGATTTGTCGAGTGCAAAAAAGGATCCTTTAGACTTACCTCAGAAAGGCGTAGCTAAACATGATGACGTACCACCTAATGCTGACTCTGGAGGGACACAGCTTGTAGTTGACCAGGATACCTCCACCAAAACTGCATATTTTTTGCAGAGATCGGTGAACATGTGTGTTTTACTTTGTTGTGACTACACATTGCACTTATGTTCATTGAAGTCTCTGCTTGAGGGTGACAGTAACTGCATTCTGAAGGTGAATCTTGTAAAACCGTGTTGTTGGACTACAATCTTCAAAAAAGATGGAAAAGACAGTGGATTGGTTATACTAAATCAGACAGGAGTCTTTGAGATCAGGTCTTTTCCAAATCTTGAAGTGGTCAGAGATATATCATTAATGACGATTCTAAGATGGAACTTCGTGATCAACATGGATAAGACATTCTGTTCCTCTGATCGTGGGCAAATGATTCTGGTACATGGGTGTGAATTAGCTTTTGTATCTCTTTTGGCCTACGAAGATGACTTCAGGATTTTGGAGTCCTTCCCTTGTCTTCATGATAAAGTGCTTGCAGCTGCTACAGATGTCATTGCTGATTTATCTCAAAGACAGAAACAGAGTGCTGCCCATAGGATTTTAGGAGGTATCATTAAGGGCTTAAAAACTAGTAAAGAGGATCAAAACATGGACCCGACTGGAAATCATGAAAAATATTGTGCGAATTTGGAGAGCTTATTTTCAAATCCCCCATTCTTAAAACCTTCCACAGATGTGAAGGATGGCCAAGAACCCGTGGTGCTTAACCTAGATGATATTGTAATTGATGGCCCTATTACTGTCTTGCCTAAAGATCCAAACAAGAAGAATGAAAAGAAAGACAAGCAGGGATCAGAGAAGAAAAAGTTATTTGAAGGCGCAACTAGTGATACAAAGCCAAAAATGAGGACAGCTGCTGAAATCAAGGCTAAATATAGAGAAACTGGGGATGTCTCTGCAGCAGCTGCACGTGCAAGAGATATGCTTGCCGAACGTGGGGAAAAACTTGAGAAACTCAGAGAAAACACAGAAGAACTATCGAGTGGAGCTCAGGACTTCGCATCGATGGCAAAGGAACTCGCCAAGAGAATGGAGAATCGTAAATGGTGGCACATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0002791 GO:0002792 GO:0002793 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008047 GO:0008150 GO:0010646 GO:0010648 GO:0010817 GO:0016020 GO:0017016 GO:0017137 GO:0017157 GO:0019899 GO:0019905 GO:0023051 GO:0023057 GO:0030234 GO:0030695 GO:0031267 GO:0032879 GO:0032880 GO:0033500 GO:0042592 GO:0042593 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0046676 GO:0046883 GO:0046888 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048878 GO:0050708 GO:0050709 GO:0050714 GO:0050789 GO:0050790 GO:0050794 GO:0050796 GO:0051020 GO:0051046 GO:0051047 GO:0051048 GO:0051049 GO:0051050 GO:0051051 GO:0051222 GO:0051223 GO:0051224 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071944 GO:0090087 GO:0090276 GO:0090278 GO:0098772 GO:1903530 GO:1903531 GO:1903532 GO:1904950 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANAPC4_WD40 Synaptobrevin

Protein Analysis

1076

Amino Acids

118.66

Weight (kDa)

5.61

Isoelectric Point (pI)

33.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Synaptobrevin	PF00957	1031 - 1073	1.8e-06	Synaptobrevin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05570 AT5G05570
fragaria_vesca	FvH4_6g11290 FvH4_6g11290 FvH4_6g11290 FvH4_7g24600 FvH4_7g24600
malus_domestica	MD01G1154200.v1.1 MD04G1155600.v1.1 MD07G1223200.v1.1 MD12G1168800.v1.1
prunus_persica	Prupe.2G251300_v2.0.a1 Prupe.6G279100_v2.0.a1 Prupe.6G279100_v2.0.a1
pyrus_communis	pycom01g17150 pycom04g14030 pycom12g16030
rosa_chinensis	RchiOBHm_Chr1g0370431 RchiOBHm_Chr3g0462831
rosa_laevigata	RLG00000024829 RLG00000027044
rosa_multiflora	Rmu_sc0000766.1_g000011 Rmu_sc0005656.1_g000008 Rmu_sc0035228.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286580 Rroxscaffold_6G00417170
rosa_rugosa	Rorug01G0356400 Rorug01G0356500 Rorug01G0356600 Rorug03G0059500 Rorug03G0059500
rosa_samantha	Rh1AG364900 Rh1BG328100 Rh1CG341100 Rh1DG358400 Rh3AG117600 Rh3BG121400 Rh3CG124300 Rh3DG123000
rosa_wichuraiana	Rw1G032160 Rw3G009970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	597
AccB1I	GGYRCC	1 cut(s)	386
AccB7I	CCANNNNNTGG	1 cut(s)	1070
AccI	GTMKAC	2 cut(s)	782, 1322
AclWI	GGATC	9 cut(s)	71, 798, 1456, 1898, 2102, 2115, 2760, 2921, 2971
AcoI	YGGCCR	2 cut(s)	1807, 2857
AcsI	RAATTY	5 cut(s)	300, 1405, 1562, 1771, 2797
AcuI	CTGAAG	6 cut(s)	468, 522, 969, 969, 2348, 2587
AcvI	CACGTG	1 cut(s)	3083
AdeI	CACNNNGTG	1 cut(s)	1663
AfaI	GTAC	3 cut(s)	2057, 2154, 2553
AfiI	CCNNNNNNNGG	7 cut(s)	49, 171, 1070, 1370, 1886, 2129, 3108
AflIII	ACRYGT	2 cut(s)	396, 2244
AgsI	TTSAA	9 cut(s)	19, 206, 626, 1342, 2293, 2371, 2450, 2817, 2987
AhdI	GACNNNNNGTC	1 cut(s)	860
AhlI	ACTAGT	2 cut(s)	2741, 2996
AjnI	CCWGG	2 cut(s)	165, 2196
AjuI	GAANNNNNNNTTGG	2 cut(s)	2020, 2052
AleI	CACNNNNGTG	2 cut(s)	1724, 2846
Alw21I	GWGCWC	2 cut(s)	1721, 3163
Alw26I	GTCTC	8 cut(s)	289, 847, 1414, 1555, 1640, 1865, 2301, 3070
Alw44I	GTGCAC	1 cut(s)	1717
AlwI	GGATC	9 cut(s)	71, 798, 1456, 1898, 2102, 2115, 2760, 2921, 2971
AlwNI	CAGNNNCTG	4 cut(s)	1070, 2319, 3029, 3077
AoxI	GGCC	9 cut(s)	234, 910, 1361, 1709, 1807, 2015, 2586, 2857, 2902
ApaLI	GTGCAC	1 cut(s)	1717
ApeKI	GCWGC	9 cut(s)	506, 1067, 2648, 2651, 2699, 3026, 3071, 3074, 3077
ApoI	RAATTY	5 cut(s)	300, 1405, 1562, 1771, 2797
AseI	ATTAAT	1 cut(s)	2471
Asp700I	GAANNNNTTC	3 cut(s)	210, 954, 1407
AspA2I	CCTAGG	1 cut(s)	905
AspLEI	GCGC	1 cut(s)	2993
AspS9I	GGNCC	8 cut(s)	586, 910, 1021, 1505, 1709, 2016, 2764, 2903
AsuII	TTCGAA	1 cut(s)	1456
AvaII	GGWCC	4 cut(s)	586, 1021, 1505, 2764
AvrII	CCTAGG	1 cut(s)	905
AxyI	CCTNAGG	2 cut(s)	48, 1509
BaeGI	GKGCMC	1 cut(s)	1721
BaeI	ACNNNNGTAYC	2 cut(s)	2543, 2576
BalI	TGGCCA	1 cut(s)	2859
BamHI	GGATCC	1 cut(s)	2107
BanI	GGYRCC	1 cut(s)	386
BanII	GRGCYC	1 cut(s)	3163
BbrPI	CACGTG	1 cut(s)	3083
BbsI	GAAGAC	2 cut(s)	975, 2621
Bbv12I	GWGCWC	2 cut(s)	1721, 3163
BbvCI	CCTCAGC	1 cut(s)	1285
BbvI	GCAGC	9 cut(s)	518, 1054, 2638, 2660, 2686, 3013, 3064, 3083, 3086
BciT130I	CCWGG	2 cut(s)	167, 2198
BciVI	GTATCC	2 cut(s)	1215, 2194
BclI	TGATCA	2 cut(s)	2004, 2499
BcoDI	GTCTC	8 cut(s)	289, 847, 1414, 1555, 1640, 1865, 2301, 3070
BcuI	ACTAGT	2 cut(s)	2741, 2996
BfaI	CTAG	6 cut(s)	279, 830, 906, 2742, 2882, 2997
BfmI	CTRYAG	5 cut(s)	1194, 1500, 1530, 2655, 3069
BfuAI	ACCTGC	1 cut(s)	597
BfuI	GTATCC	2 cut(s)	1215, 2194
BglII	AGATCT	2 cut(s)	797, 1526
BisI	GCNGC	9 cut(s)	507, 1068, 2649, 2652, 2700, 3027, 3072, 3075, 3078
BlnI	CCTAGG	1 cut(s)	905
BlsI	GCNGC	9 cut(s)	508, 1069, 2650, 2653, 2701, 3028, 3073, 3076, 3079
Bme1390I	CCNGG	2 cut(s)	167, 2198
Bme18I	GGWCC	4 cut(s)	586, 1021, 1505, 2764
BmeRI	GACNNNNNGTC	1 cut(s)	860
BmgT120I	GGNCC	8 cut(s)	586, 910, 1021, 1505, 1709, 2016, 2764, 2903
BmiI	GGNNCC	6 cut(s)	163, 388, 580, 911, 2109, 2766
BmrFI	CCNGG	2 cut(s)	167, 2198
BmrI	ACTGGG	1 cut(s)	3066
BmsI	GCATC	8 cut(s)	125, 433, 640, 1387, 1456, 1530, 2032, 3182
BmuI	ACTGGG	1 cut(s)	3066
BoxI	GACNNNNGTC	1 cut(s)	2417
BpiI	GAAGAC	2 cut(s)	975, 2621
BplI	GAGNNNNNCTC	4 cut(s)	674, 706, 3145, 3177
BpmI	CTGGAG	1 cut(s)	2193
Bpu10I	CCTNAGC	3 cut(s)	225, 1285, 3162
Bpu14I	TTCGAA	1 cut(s)	1456
BpuEI	CTTGAG	3 cut(s)	271, 2324, 3140
Bsa29I	ATCGAT	2 cut(s)	119, 3176
BsaAI	YACGTR	1 cut(s)	3083
BsaBI	GATNNNNATC	1 cut(s)	75
BsaJI	CCNNGG	7 cut(s)	165, 582, 786, 905, 1296, 1712, 2868
Bsc4I	CCNNNNNNNGG	7 cut(s)	49, 171, 1070, 1370, 1886, 2129, 3108
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	5 cut(s)	881, 1375, 1999, 2776, 3061
Bse21I	CCTNAGG	2 cut(s)	48, 1509
Bse3DI	GCAATG	6 cut(s)	426, 518, 1083, 1094, 2273, 2664
Bse8I	GATNNNNATC	1 cut(s)	75
BseBI	CCWGG	2 cut(s)	167, 2198
BseCI	ATCGAT	2 cut(s)	119, 3176
BseDI	CCNNGG	7 cut(s)	165, 582, 786, 905, 1296, 1712, 2868
BseGI	GGATG	8 cut(s)	43, 175, 901, 1471, 2023, 2074, 2860, 3067
BseJI	GATNNNNATC	1 cut(s)	75
BseLI	CCNNNNNNNGG	7 cut(s)	49, 171, 1070, 1370, 1886, 2129, 3108
BseMI	GCAATG	6 cut(s)	426, 518, 1083, 1094, 2273, 2664
BseNI	ACTGG	5 cut(s)	881, 1375, 1999, 2776, 3061
BseRI	GAGGAG	1 cut(s)	1273
BseSI	GKGCMC	1 cut(s)	1721
BseXI	GCAGC	9 cut(s)	518, 1054, 2638, 2660, 2686, 3013, 3064, 3083, 3086
BseYI	CCCAGC	1 cut(s)	1382
BsgI	GTGCAG	2 cut(s)	1220, 3063
BshFI	GGCC	9 cut(s)	236, 912, 1363, 1711, 1809, 2017, 2588, 2859, 2904
BshNI	GGYRCC	1 cut(s)	386
BshVI	ATCGAT	2 cut(s)	119, 3176
BsiHKAI	GWGCWC	2 cut(s)	1721, 3163
BsiSI	CCGG	2 cut(s)	336, 1810
BslFI	GGGAC	3 cut(s)	1134, 1204, 2191
BslI	CCNNNNNNNGG	7 cut(s)	49, 171, 1070, 1370, 1886, 2129, 3108
BsmAI	GTCTC	8 cut(s)	289, 847, 1414, 1555, 1640, 1865, 2301, 3070
BsmFI	GGGAC	3 cut(s)	1134, 1204, 2191
BsmI	GAATGC	2 cut(s)	359, 2322
BsnI	GGCC	9 cut(s)	236, 912, 1363, 1711, 1809, 2017, 2588, 2859, 2904
Bsp119I	TTCGAA	1 cut(s)	1456
Bsp1286I	GDGCHC	2 cut(s)	1721, 3163
Bsp1407I	TGTACA	1 cut(s)	2055
BspANI	GGCC	9 cut(s)	236, 912, 1363, 1711, 1809, 2017, 2588, 2859, 2904
BspDI	ATCGAT	2 cut(s)	119, 3176
BspHI	TCATGA	2 cut(s)	2632, 2779
BspLI	GGNNCC	6 cut(s)	163, 388, 580, 911, 2109, 2766
BspMAI	CTGCAG	2 cut(s)	1198, 3073
BspMI	ACCTGC	1 cut(s)	597
BspPI	GGATC	9 cut(s)	71, 798, 1456, 1898, 2102, 2115, 2760, 2921, 2971
BspT104I	TTCGAA	1 cut(s)	1456
BspT107I	GGYRCC	1 cut(s)	386
BsrDI	GCAATG	6 cut(s)	426, 518, 1083, 1094, 2273, 2664
BsrFI	RCCGGY	1 cut(s)	335
BsrGI	TGTACA	1 cut(s)	2055
BsrI	ACTGG	5 cut(s)	881, 1375, 1999, 2776, 3061
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	7 cut(s)	165, 582, 786, 905, 1296, 1712, 2868
BssT1I	CCWWGG	4 cut(s)	582, 786, 905, 1296
Bst2UI	CCWGG	2 cut(s)	167, 2198
Bst6I	CTCTTC	1 cut(s)	20
BstAPI	GCANNNNNTGC	3 cut(s)	148, 1253, 3077
BstAUI	TGTACA	1 cut(s)	2055
BstBAI	YACGTR	1 cut(s)	3083
BstBI	TTCGAA	1 cut(s)	1456
BstC8I	GCNNGC	7 cut(s)	140, 149, 153, 1147, 1254, 2646, 3099
BstDSI	CCRYGG	1 cut(s)	2868
BstENI	CCTNNNNNAGG	1 cut(s)	2127
BstF5I	GGATG	8 cut(s)	43, 175, 901, 1471, 2023, 2074, 2860, 3067
BstHHI	GCGC	1 cut(s)	2993
BstMAI	GTCTC	8 cut(s)	289, 847, 1414, 1555, 1640, 1865, 2301, 3070
BstMWI	GCNNNNNNNGC	8 cut(s)	144, 148, 506, 1073, 1253, 3077, 3083, 3179
BstNI	CCWGG	2 cut(s)	167, 2198
BstNSI	RCATGY	3 cut(s)	400, 1133, 2248
BstPAI	GACNNNNGTC	1 cut(s)	2417
BstSCI	CCNGG	2 cut(s)	165, 2196
BstSFI	CTRYAG	5 cut(s)	1194, 1500, 1530, 2655, 3069
BstSLI	GKGCMC	1 cut(s)	1721
BstV1I	GCAGC	9 cut(s)	518, 1054, 2638, 2660, 2686, 3013, 3064, 3083, 3086
BstV2I	GAAGAC	2 cut(s)	975, 2621
BstX2I	RGATCY	6 cut(s)	797, 1448, 1526, 1903, 2107, 2926
BstXI	CCANNNNNNTGG	1 cut(s)	3202
BstYI	RGATCY	6 cut(s)	797, 1448, 1526, 1903, 2107, 2926
Bsu15I	ATCGAT	2 cut(s)	119, 3176
Bsu36I	CCTNAGG	2 cut(s)	48, 1509
BsuI	GTATCC	2 cut(s)	1215, 2194
BsuRI	GGCC	9 cut(s)	236, 912, 1363, 1711, 1809, 2017, 2588, 2859, 2904
BsuTUI	ATCGAT	2 cut(s)	119, 3176
BtgI	CCRYGG	1 cut(s)	2868
BtgZI	GCGATG	1 cut(s)	723
BtsCI	GGATG	8 cut(s)	43, 175, 901, 1471, 2023, 2074, 2860, 3067
BtsI	GCAGTG	1 cut(s)	1203
BtsIMutI	CAGTG	6 cut(s)	353, 874, 1203, 1248, 1992, 2395
BveI	ACCTGC	1 cut(s)	597
Cac8I	GCNNGC	7 cut(s)	140, 149, 153, 1147, 1254, 2646, 3099
CaiI	CAGNNNCTG	4 cut(s)	1070, 2319, 3029, 3077
CciI	TCATGA	2 cut(s)	2632, 2779
CfoI	GCGC	1 cut(s)	2993
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	8 cut(s)	586, 910, 1021, 1505, 1709, 2016, 2764, 2903
ClaI	ATCGAT	2 cut(s)	119, 3176
Csp6I	GTAC	3 cut(s)	2056, 2153, 2552
CviQI	GTAC	3 cut(s)	2056, 2153, 2552
DraI	TTTAAA	3 cut(s)	241, 1581, 1899
DraIII	CACNNNGTG	1 cut(s)	1663
DriI	GACNNNNNGTC	1 cut(s)	860
EaeI	YGGCCR	2 cut(s)	1807, 2857
Eam1104I	CTCTTC	1 cut(s)	20
Eam1105I	GACNNNNNGTC	1 cut(s)	860
EarI	CTCTTC	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	3161
Eco130I	CCWWGG	4 cut(s)	582, 786, 905, 1296
Eco24I	GRGCYC	1 cut(s)	3163
Eco32I	GATATC	2 cut(s)	219, 1439
Eco47I	GGWCC	4 cut(s)	586, 1021, 1505, 2764
Eco53kI	GAGCTC	1 cut(s)	3161
Eco57I	CTGAAG	6 cut(s)	468, 522, 969, 969, 2348, 2587
Eco72I	CACGTG	1 cut(s)	3083
Eco81I	CCTNAGG	2 cut(s)	48, 1509
EcoICRI	GAGCTC	1 cut(s)	3161
EcoNI	CCTNNNNNAGG	1 cut(s)	2127
EcoO109I	RGGNCCY	2 cut(s)	586, 1505
EcoRII	CCWGG	2 cut(s)	165, 2196
EcoRV	GATATC	2 cut(s)	219, 1439
EcoT14I	CCWWGG	4 cut(s)	582, 786, 905, 1296
EcoT22I	ATGCAT	1 cut(s)	1010
EcoT38I	GRGCYC	1 cut(s)	3163
ErhI	CCWWGG	4 cut(s)	582, 786, 905, 1296
FaqI	GGGAC	3 cut(s)	1134, 1204, 2191
FauNDI	CATATG	1 cut(s)	3227
FbaI	TGATCA	2 cut(s)	2004, 2499
FblI	GTMKAC	2 cut(s)	782, 1322
Fnu4HI	GCNGC	9 cut(s)	507, 1068, 2649, 2652, 2700, 3027, 3072, 3075, 3078
FokI	GGATG	8 cut(s)	30, 182, 888, 1478, 2010, 2081, 2867, 3074
FriOI	GRGCYC	1 cut(s)	3163
Fsp4HI	GCNGC	9 cut(s)	507, 1068, 2649, 2652, 2700, 3027, 3072, 3075, 3078
FspBI	CTAG	6 cut(s)	279, 830, 906, 2742, 2882, 2997
GlaI	GCGC	1 cut(s)	2992
GluI	GCNGC	9 cut(s)	507, 1068, 2649, 2652, 2700, 3027, 3072, 3075, 3078
GsaI	CCCAGC	1 cut(s)	1386
GsuI	CTGGAG	1 cut(s)	2193
HaeIII	GGCC	9 cut(s)	236, 912, 1363, 1711, 1809, 2017, 2588, 2859, 2904
HapII	CCGG	2 cut(s)	336, 1810
HhaI	GCGC	1 cut(s)	2993
Hin6I	GCGC	1 cut(s)	2991
HinP1I	GCGC	1 cut(s)	2991
HincII	GTYRAC	2 cut(s)	1315, 2194
HindII	GTYRAC	2 cut(s)	1315, 2194
HindIII	AAGCTT	1 cut(s)	1250
HpaII	CCGG	2 cut(s)	336, 1810
Hpy166II	GTNNAC	7 cut(s)	783, 1021, 1315, 1323, 1719, 2194, 2242
Hpy8I	GTNNAC	7 cut(s)	783, 1021, 1315, 1323, 1719, 2194, 2242
Hpy99I	CGWCG	1 cut(s)	1489
HpyCH4IV	ACGT	3 cut(s)	2151, 3082, 3106
HpyF10VI	GCNNNNNNNGC	8 cut(s)	144, 148, 506, 1073, 1253, 3077, 3083, 3179
HpySE526I	ACGT	3 cut(s)	2151, 3082, 3106
HspAI	GCGC	1 cut(s)	2991
Ksp22I	TGATCA	2 cut(s)	2004, 2499
LmnI	GCTCC	2 cut(s)	1778, 3158
Lsp1109I	GCAGC	9 cut(s)	518, 1054, 2638, 2660, 2686, 3013, 3064, 3083, 3086
LweI	GCATC	8 cut(s)	125, 433, 640, 1387, 1456, 1530, 2032, 3182
MaeI	CTAG	6 cut(s)	279, 830, 906, 2742, 2882, 2997
MaeII	ACGT	3 cut(s)	2151, 3082, 3106
MaeIII	GTNAC	6 cut(s)	60, 1088, 1663, 2264, 2309, 2315
MfeI	CAATTG	1 cut(s)	156
MflI	RGATCY	6 cut(s)	797, 1448, 1526, 1903, 2107, 2926
MhlI	GDGCHC	2 cut(s)	1721, 3163
MlsI	TGGCCA	1 cut(s)	2859
MluNI	TGGCCA	1 cut(s)	2859
MlyI	GAGTC	6 cut(s)	788, 849, 1847, 2162, 2427, 2624
MmeI	TCCRAC	3 cut(s)	523, 1502, 2336
Mox20I	TGGCCA	1 cut(s)	2859
Mph1103I	ATGCAT	1 cut(s)	1010
MroXI	GAANNNNTTC	3 cut(s)	210, 954, 1407
MscI	TGGCCA	1 cut(s)	2859
MslI	CAYNNNNRTG	4 cut(s)	1134, 1724, 2559, 2846
Msp20I	TGGCCA	1 cut(s)	2859
MspA1I	CMGCKG	6 cut(s)	509, 1067, 1724, 2651, 3026, 3077
MspI	CCGG	2 cut(s)	336, 1810
MspR9I	CCNGG	2 cut(s)	167, 2198
MunI	CAATTG	1 cut(s)	156
Mva1269I	GAATGC	2 cut(s)	359, 2322
MvaI	CCWGG	2 cut(s)	167, 2198
MwoI	GCNNNNNNNGC	8 cut(s)	144, 148, 506, 1073, 1253, 3077, 3083, 3179
NdeI	CATATG	1 cut(s)	3227
NlaIV	GGNNCC	6 cut(s)	163, 388, 580, 911, 2109, 2766
NmuCI	GTSAC	5 cut(s)	60, 1088, 1663, 2264, 2309
NsiI	ATGCAT	1 cut(s)	1010
NspI	RCATGY	3 cut(s)	400, 1133, 2248
NspV	TTCGAA	1 cut(s)	1456
OliI	CACNNNNGTG	2 cut(s)	1724, 2846
PagI	TCATGA	2 cut(s)	2632, 2779
PciI	ACATGT	2 cut(s)	396, 2244
PctI	GAATGC	2 cut(s)	359, 2322
PdmI	GAANNNNTTC	3 cut(s)	210, 954, 1407
PflMI	CCANNNNNTGG	1 cut(s)	1070
PkrI	GCNGC	9 cut(s)	508, 1069, 2650, 2653, 2701, 3028, 3073, 3076, 3079
PleI	GAGTC	6 cut(s)	787, 849, 1847, 2162, 2426, 2623
PmaCI	CACGTG	1 cut(s)	3083
PmlI	CACGTG	1 cut(s)	3083
PpsI	GAGTC	6 cut(s)	787, 849, 1847, 2162, 2426, 2623
Ppu21I	YACGTR	1 cut(s)	3083
PpuMI	RGGWCCY	2 cut(s)	586, 1505
PscI	ACATGT	2 cut(s)	396, 2244
PshAI	GACNNNNGTC	1 cut(s)	2417
PshBI	ATTAAT	1 cut(s)	2471
Psp124BI	GAGCTC	1 cut(s)	3163
Psp5II	RGGWCCY	2 cut(s)	586, 1505
Psp6I	CCWGG	2 cut(s)	165, 2196
PspCI	CACGTG	1 cut(s)	3083
PspFI	CCCAGC	1 cut(s)	1382
PspGI	CCWGG	2 cut(s)	165, 2196
PspN4I	GGNNCC	6 cut(s)	163, 388, 580, 911, 2109, 2766
PspPI	GGNCC	8 cut(s)	586, 910, 1021, 1505, 1709, 2016, 2764, 2903
PspPPI	RGGWCCY	2 cut(s)	586, 1505
PstI	CTGCAG	2 cut(s)	1198, 3073
PstNI	CAGNNNCTG	4 cut(s)	1070, 2319, 3029, 3077
PsuI	RGATCY	6 cut(s)	797, 1448, 1526, 1903, 2107, 2926
PvuII	CAGCTG	6 cut(s)	509, 1067, 1724, 2651, 3026, 3077
RsaI	GTAC	3 cut(s)	2057, 2154, 2553
RsaNI	GTAC	3 cut(s)	2056, 2153, 2552
RseI	CAYNNNNRTG	4 cut(s)	1134, 1724, 2559, 2846
SacI	GAGCTC	1 cut(s)	3163
SatI	GCNGC	9 cut(s)	507, 1068, 2649, 2652, 2700, 3027, 3072, 3075, 3078
Sau96I	GGNCC	8 cut(s)	586, 910, 1021, 1505, 1709, 2016, 2764, 2903
SchI	GAGTC	6 cut(s)	788, 849, 1847, 2162, 2427, 2624
ScrFI	CCNGG	2 cut(s)	167, 2198
SduI	GDGCHC	2 cut(s)	1721, 3163
SfaNI	GCATC	8 cut(s)	125, 433, 640, 1387, 1456, 1530, 2032, 3182
SfcI	CTRYAG	5 cut(s)	1194, 1500, 1530, 2655, 3069
SfuI	TTCGAA	1 cut(s)	1456
SinI	GGWCC	4 cut(s)	586, 1021, 1505, 2764
SmiMI	CAYNNNNRTG	4 cut(s)	1134, 1724, 2559, 2846
SmlI	CTYRAG	3 cut(s)	286, 2303, 3119
SmoI	CTYRAG	3 cut(s)	286, 2303, 3119
SpeI	ACTAGT	2 cut(s)	2741, 2996
SspI	AATATT	2 cut(s)	202, 2789
SspMI	CTAG	6 cut(s)	279, 830, 906, 2742, 2882, 2997
SstI	GAGCTC	1 cut(s)	3163
StyD4I	CCNGG	2 cut(s)	165, 2196
StyI	CCWWGG	4 cut(s)	582, 786, 905, 1296
TaiI	ACGT	3 cut(s)	2154, 3085, 3109
TaqI	TCGA	9 cut(s)	75, 119, 454, 1416, 1456, 2051, 2093, 3152, 3176
TatI	WGTACW	1 cut(s)	2055
TscAI	CASTG	6 cut(s)	353, 881, 1203, 1248, 1999, 2395
TseFI	GTSAC	5 cut(s)	60, 1088, 1663, 2264, 2309
TseI	GCWGC	9 cut(s)	506, 1067, 2648, 2651, 2699, 3026, 3071, 3074, 3077
Tsp45I	GTSAC	5 cut(s)	60, 1088, 1663, 2264, 2309
TspGWI	ACGGA	1 cut(s)	1473
TspRI	CASTG	6 cut(s)	353, 881, 1203, 1248, 1999, 2395
Van91I	CCANNNNNTGG	1 cut(s)	1070
VneI	GTGCAC	1 cut(s)	1717
VpaK11BI	GGWCC	4 cut(s)	586, 1021, 1505, 2764
VspI	ATTAAT	1 cut(s)	2471
XagI	CCTNNNNNAGG	1 cut(s)	2127
XapI	RAATTY	5 cut(s)	300, 1405, 1562, 1771, 2797
XceI	RCATGY	3 cut(s)	400, 1133, 2248
XmaJI	CCTAGG	1 cut(s)	905
XmiI	GTMKAC	2 cut(s)	782, 1322
XmnI	GAANNNNTTC	3 cut(s)	210, 954, 1407
XspI	CTAG	6 cut(s)	279, 830, 906, 2742, 2882, 2997
Zsp2I	ATGCAT	1 cut(s)	1010

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.