RH3DG123000

WD40 repeats

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0002511
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG123000.1

Sequence Viewer

Length: 3192 bp
ATGTTCGCCAAGCGACTCTTACAGAAGGCCGTCAACCACCACCACCATTCTCAGCACAGTTTGCAACAAGAAAGTATGACGTCAGCAGACTTGGACCTGCGAGTTGCAGCTCACTATGGTATTCCATCTACGGCGTCCATTCTTGCTTTCGACCCCATTCAGCGGCTTCTGGCCATCGGGACATTGGATGGGAGGATTAAAGTAATTGGTGGTGACGGTATTGAAGGACTTCTTATATCCCAAAAACAATTGCCTTACAAATACATCGAGGTTTGGAATCTTGAGGGCAGATGCCTAGTTTGTTCTCTAGAGTGGGAATCGAATATAACTGCTTTTTCTGTAATCCATGGCTCGAACTTAATGTATGTGGGCGATGAGTATGCTCTATTGGCTGTGGTGAAGTATGATGCTGACGAGGGAAAACTTTTGCAGTTGCCATATCATATATCTGCAGATTCATTAAGTGAAGCTGCCGAGTTTCCATTTCCTACCGACCAACCGATAGTTGGACTTCTTCCCCAACCTGGTTCATCTGGAAATAGAGTACTGATTGCGTATCAAAATGGGTTGCTTATTCTTTGGGATGTGTCCGAGGCTCAAATTGTTTTTATTGGAGGTGGTAAGGATCTCCAACTAAAGGATGGAGTTGTTAAGCCTACTGATGAAGTCAATATAGATTCTCCAGAAAATACAATAGAACATCAACTGGGAGAGAAAGAGATAAGTGCTCTTTGTTGGGCATCATCCAATGGGTCCATTCTGGCTGTGGGATATGTAGATGGAGATATTCTGTTCTGGAACACGTCATCTGCTGCTTCCATTAAGGGTCAACAAGCATTGTCATCATCTAATAATGTTGTTAAGTTACGATTATCATCATCAGAAAGAAGACTTCCTGTCATTGTCTTACAGTGGTCCACATTAAATAAATCCCATAATGATTCTGATGGACAACTATTTATCTATGGTGGCGATGAAATAGGATCAGACGAAGTTTTGACGGTTTTGACTCTTGATTGGTCTTCGGGGATGGGGAATTTAAGATGTGTTGGCCGTACGGACCTTACCCTTACTGGTTCCTTTGCAGACATGATTTTATTACCAAATTTTGCAACAATTGCCGGTAATCACAGAGCTGATGCATTTGTGTTAACAAACCCTGGGCAATTGCACTTTTATGATGAAACCAGTCTCTCGGCCCTAATATCCCAGCAAGAAAAGAAACCATCTGTCTCTGCTTTGGAGTTTCCAGTGGTGATACCCACCACTAATCCGACCATGACTGCTGCCAGACTTATTAGGACAGCTACTGGGGAGAACTCGTTAAAGTCTCTATCAGAGTTATGCTCAGTTGTGAACCTTGGCTCACTACCAACTTCATTAGATGGTACAAAATGGCCCTTGACTGGGGGTGTGCCCAGTCAATTGTCTCTTTCAAAGAGTAGTGGTATTGAGAGAGTATATCTAGCAGGATATTCAGATGGATCTGTTCGGATCTGGAATGCCACCTATCCGCTCATATCTTTTATCTCTGTTTTAGAAGGCGAGGTGCAAGATGTAAAAGTGGCTGGTTTAAGTTCTCCGGTATCAAGAATGGATTTCTGCAGCTTCACTTTAAATTTGGCTGTTGGCAGTGAATCTGGTTTGGTTCGAATTTATAACCTCAAAGGGCATTCAGATGGGGTAAAATTCCTCTTTGTGACCGAAACCAAATGTGAAGCCCACAGTTTTTCTCAAGGAAAAGGACCTCAATGCAGAGCTGTTTTCAGTCTTACTAATTCCCGAGTTCAAGCACTTCAGTTTGTGAAGCATGGTGGTAAACTTGCAGTGGGATTTGAATGCGGTCATGTTGCAATGCTGGACACAAGTTCCTTATCTATATTGTTCTTCATAAAAGATGCAAATTTCTCTAGCTCCTCAGTCATTTCAATGACTTGGAAAGAAATTACAAATCCTCAAGGCCTCTTGAAGAGTTCAAAGCTCTTGGAAACTAAATCACCAGTTCACCCTGCAGAGGAAGTAATGTTCATTCTAACCAAAGATGCCAATATACATTTAATTTGTGGAAACACGGGTAATATGGTCATCCCTCGGCCATGGCACTTGAAAAAGGAGTCGATTGCAATTTCAATGTATGTTATAGATGGCAGAATTTCAGCCTCTAAAGTATCTGATGCAAATCCGCCGGAAGAGGCCTCAAAGGATACTTCAACCAAGAATGAGTCTATGGCAGTGCAATTGTACTCCACAAAATCTGTGATTCAGGGAAACAATGAACCCATTCGAAAGGTGAAACATGCAAGACCTTGCATTTGGACGGCAACTCTGAAAAAAGTTGAAAAAGTTTGGGGATTGACTTTGCTGTTTCAGACTGGAGAGATTGAAATTAGATCTATTCCTGATTTAGAATTGGTGAAAGAAAGCTCCTTAATGTCAATTCTAAGGTGGAATTGTAAGGCAAATATGGATAAGACAATGAGTTCCGATGATGCACATATCACACTGGCAAATGGGTATGAAACGGTATTCATCTCTCTGTTAGCTGCTGAAAATGATTTCAGGATTCCAGAGTCTTTGCCTTGTCTCCATGATGCAGTTCTTGCAGCTGCTGCAGATGCTGCATTAAGTGCCTCTTTAAATCAGAAGAAGAAACAGAGTACTGCCCCTGCGATATTAGGTGGTATTGTCAAAGGCTTGAAAGGAGGAAAAATGGTTCAGGGTGGAGATTCTACTGCAACTCCTAAATCCAGGTTCGATCATTTAGAAGGCATGTTTTGCAAGTCCCAGCAGTGGGACTCGGTCCCAGCTTTGGATCATCAAGAAAATCTGGAGCTTAATATAGATGACATTGAAATTGATGAACCTCTACGCGTGACATCTACTTCAACATCCCATGATGATGATAATAAAAGGAGAGAAGGGGACTCAGAAAGGGATAGATTATTTCAAGGTGGGACTAGTGATACAAAGCCCAGAGTTAGGACTGCTGAAGAAATTAAAGCTAAATATAGAAAAGCTGAGGATGCTTCTTCGGTGGCTTCCCAAGCAAGAAATAAGCTCATGGAGAGGGGGCAAAAACTTGAGAAACTCAGCAAGCGCACGGAGGATCTACAGAATGGAGCTGAAGATTTTGCATCAATGGCGAATGAGCTAGTCAAGACATTAGAAGCGCGAAAATGGTGGCATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000137 GO:0000139 GO:0000902 GO:0000904 GO:0002791 GO:0003674 GO:0005096 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005795 GO:0005802 GO:0005856 GO:0005886 GO:0005938 GO:0006810 GO:0006892 GO:0006893 GO:0006996 GO:0007010 GO:0007275 GO:0007399 GO:0007409 GO:0008047 GO:0008150 GO:0009653 GO:0009987 GO:0010008 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016192 GO:0017016 GO:0017137 GO:0017157 GO:0019899 GO:0019900 GO:0019901 GO:0022008 GO:0022607 GO:0030029 GO:0030030 GO:0030036 GO:0030154 GO:0030182 GO:0030234 GO:0030695 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0031090 GO:0031175 GO:0031267 GO:0031410 GO:0031901 GO:0031982 GO:0031984 GO:0031985 GO:0032501 GO:0032502 GO:0032588 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043547 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048193 GO:0048468 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050708 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051046 GO:0051049 GO:0051179 GO:0051223 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0061564 GO:0065003 GO:0065007 GO:0065009 GO:0070201 GO:0071840 GO:0071944 GO:0090087 GO:0097708 GO:0098588 GO:0098772 GO:0098791 GO:0098805 GO:0098876 GO:0099568 GO:0120036 GO:0120039 GO:1903530
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANAPC4_WD40 Synaptobrevin

Protein Analysis

1063

Amino Acids

116.1

Weight (kDa)

5.82

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Synaptobrevin PF00957 1014 - 1057 2e-06 Synaptobrevin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1659
AatII GACGTC 1 cut(s) 83
Acc36I ACCTGC 1 cut(s) 105
AccBSI CCGCTC 1 cut(s) 1516
AccII CGCG 2 cut(s) 2871, 3172
AciI CCGC 4 cut(s) 163, 1514, 1842, 2183
AclWI GGATC 6 cut(s) 633, 991, 1492, 1502, 2820, 3114
AcoI YGGCCR 3 cut(s) 171, 1051, 2093
AcsI RAATTY 7 cut(s) 1036, 1105, 1618, 1653, 1688, 1903, 2151
AcuI CTGAAG 3 cut(s) 1781, 3009, 3144
AcyI GRCGYC 2 cut(s) 80, 134
AfaI GTAC 5 cut(s) 546, 1057, 1390, 2243, 2659
AflIII ACRYGT 2 cut(s) 801, 2869
AhdI GACNNNNNGTC 1 cut(s) 896
AhlI ACTAGT 1 cut(s) 2957
AjiI CACGTC 1 cut(s) 804
AjnI CCWGG 3 cut(s) 523, 1159, 2747
AloI GAACNNNNNNTCC 4 cut(s) 2009, 2041, 2697, 2729
Alw21I GWGCWC 1 cut(s) 730
Alw26I GTCTC 5 cut(s) 1196, 1237, 1335, 1434, 2588
AlwI GGATC 6 cut(s) 633, 991, 1492, 1502, 2820, 3114
AlwNI CAGNNNCTG 3 cut(s) 1310, 2609, 2618
Ama87I CYCGRG 1 cut(s) 1782
AoxI GGCC 8 cut(s) 27, 171, 1051, 1197, 1397, 1960, 2093, 2193
ApoI RAATTY 7 cut(s) 1036, 1105, 1618, 1653, 1688, 1903, 2151
ArsI GACNNNNNNTTYG 2 cut(s) 2295, 2327
Asp700I GAANNNNTTC 2 cut(s) 228, 2280
AspLEI GCGC 2 cut(s) 3099, 3172
AspS9I GGNCC 8 cut(s) 94, 753, 915, 1060, 1198, 1398, 1745, 2800
AsuHPI GGTGA 7 cut(s) 224, 409, 1267, 1989, 1997, 2302, 2425
AsuII TTCGAA 2 cut(s) 1651, 2284
AvaI CYCGRG 1 cut(s) 1782
AvaII GGWCC 6 cut(s) 94, 753, 915, 1060, 1745, 2800
BaeGI GKGCMC 1 cut(s) 1419
BalI TGGCCA 1 cut(s) 173
BbsI GAAGAC 2 cut(s) 895, 1014
Bbv12I GWGCWC 1 cut(s) 730
BbvCI CCTCAGC 1 cut(s) 3018
BceAI ACGGC 4 cut(s) 14, 147, 1038, 2334
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BciT130I CCWGG 3 cut(s) 525, 1161, 2749
BciVI GTATCC 1 cut(s) 2197
BcoDI GTCTC 5 cut(s) 1196, 1237, 1335, 1434, 2588
BcuI ACTAGT 1 cut(s) 2957
BfaI CTAG 6 cut(s) 296, 308, 1466, 1911, 2958, 3152
BfmI CTRYAG 5 cut(s) 450, 1603, 2010, 2610, 3110
BfuAI ACCTGC 1 cut(s) 105
BfuI GTATCC 1 cut(s) 2197
BglII AGATCT 1 cut(s) 2390
BmcAI AGTACT 2 cut(s) 546, 2659
Bme1390I CCNGG 3 cut(s) 525, 1161, 2749
Bme18I GGWCC 6 cut(s) 94, 753, 915, 1060, 1745, 2800
BmeRI GACNNNNNGTC 1 cut(s) 896
BmeT110I CYCGRG 1 cut(s) 1782
BmgBI CACGTC 1 cut(s) 804
BmgT120I GGNCC 8 cut(s) 94, 753, 915, 1060, 1198, 1398, 1745, 2800
BmiI GGNNCC 3 cut(s) 754, 1078, 2802
BmrFI CCNGG 3 cut(s) 525, 1161, 2749
BmrI ACTGGG 4 cut(s) 716, 1320, 1413, 1416
BmuI ACTGGG 4 cut(s) 716, 1320, 1413, 1416
BpiI GAAGAC 2 cut(s) 895, 1014
BplI GAGNNNNNCTC 2 cut(s) 1331, 1363
BpmI CTGGAG 3 cut(s) 666, 2394, 2849
Bpu10I CCTNAGC 1 cut(s) 3018
Bpu14I TTCGAA 2 cut(s) 1651, 2284
BpuEI CTTGAG 4 cut(s) 302, 1719, 1941, 3101
BsaBI GATNNNNATC 2 cut(s) 874, 2178
BsaHI GRCGYC 2 cut(s) 80, 134
BsaJI CCNNGG 7 cut(s) 346, 591, 1159, 1160, 1360, 2090, 2096
BsaWI WCCGGW 1 cut(s) 1582
BsaXI ACNNNNNCTCC 4 cut(s) 1307, 1337, 2722, 2752
Bse118I RCCGGY 1 cut(s) 1121
Bse3DI GCAATG 1 cut(s) 1860
Bse8I GATNNNNATC 2 cut(s) 874, 2178
BseBI CCWGG 3 cut(s) 525, 1161, 2749
BseDI CCNNGG 7 cut(s) 346, 591, 1159, 1160, 1360, 2090, 2096
BseGI GGATG 8 cut(s) 193, 589, 646, 743, 1035, 2085, 2888, 3028
BseJI GATNNNNATC 2 cut(s) 874, 2178
BseMI GCAATG 1 cut(s) 1860
BseMII CTCAG 6 cut(s) 65, 1362, 1932, 2940, 3009, 3103
BseRI GAGGAG 1 cut(s) 1906
BseSI GKGCMC 1 cut(s) 1419
BseYI CCCAGC 3 cut(s) 1209, 2784, 2803
Bsh1236I CGCG 2 cut(s) 2871, 3172
BshFI GGCC 8 cut(s) 29, 173, 1053, 1199, 1399, 1962, 2095, 2195
BsiHKAI GWGCWC 1 cut(s) 730
BsiHKCI CYCGRG 1 cut(s) 1782
BsiSI CCGG 3 cut(s) 1122, 1583, 2186
BsiWI CGTACG 1 cut(s) 1055
BslFI GGGAC 6 cut(s) 193, 2767, 2786, 2807, 2936, 2968
BsmAI GTCTC 5 cut(s) 1196, 1237, 1335, 1434, 2588
BsmFI GGGAC 6 cut(s) 193, 2767, 2786, 2807, 2936, 2968
BsmI GAATGC 3 cut(s) 1507, 1672, 1844
BsnI GGCC 8 cut(s) 29, 173, 1053, 1199, 1399, 1962, 2095, 2195
BsoBI CYCGRG 1 cut(s) 1782
Bsp119I TTCGAA 2 cut(s) 1651, 2284
Bsp1286I GDGCHC 2 cut(s) 730, 1419
Bsp143I GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
Bsp19I CCATGG 2 cut(s) 346, 2096
BspACI CCGC 4 cut(s) 163, 1514, 1842, 2183
BspANI GGCC 8 cut(s) 29, 173, 1053, 1199, 1399, 1962, 2095, 2195
BspCNI CTCAG 6 cut(s) 64, 1361, 1931, 2939, 3010, 3102
BspFNI CGCG 2 cut(s) 2871, 3172
BspLI GGNNCC 3 cut(s) 754, 1078, 2802
BspMAI CTGCAG 4 cut(s) 454, 1607, 2014, 2614
BspMI ACCTGC 1 cut(s) 105
BspPI GGATC 6 cut(s) 633, 991, 1492, 1502, 2820, 3114
BspT104I TTCGAA 2 cut(s) 1651, 2284
BsrBI CCGCTC 1 cut(s) 1516
BsrDI GCAATG 1 cut(s) 1860
BsrFI RCCGGY 1 cut(s) 1121
BssAI RCCGGY 1 cut(s) 1121
BssECI CCNNGG 7 cut(s) 346, 591, 1159, 1160, 1360, 2090, 2096
BssMI GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
BssNI GRCGYC 2 cut(s) 80, 134
BssT1I CCWWGG 3 cut(s) 346, 1360, 2096
Bst2UI CCWGG 3 cut(s) 525, 1161, 2749
Bst4CI ACNGT 6 cut(s) 59, 218, 912, 1003, 1727, 2524
Bst6I CTCTTC 2 cut(s) 1964, 2184
BstACI GRCGYC 2 cut(s) 80, 134
BstAPI GCANNNNNTGC 7 cut(s) 61, 1118, 2600, 2609, 2618, 2627, 2775
BstBI TTCGAA 2 cut(s) 1651, 2284
BstC8I GCNNGC 1 cut(s) 3095
BstDEI CTNAG 7 cut(s) 51, 1348, 1918, 2441, 2926, 3018, 3089
BstDSI CCRYGG 2 cut(s) 346, 2096
BstF5I GGATG 8 cut(s) 193, 589, 646, 743, 1035, 2085, 2888, 3028
BstFNI CGCG 2 cut(s) 2871, 3172
BstHHI GCGC 2 cut(s) 3099, 3172
BstKTI GATC 8 cut(s) 628, 986, 1487, 1497, 2393, 2758, 2815, 3109
BstMAI GTCTC 5 cut(s) 1196, 1237, 1335, 1434, 2588
BstMBI GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
BstNI CCWGG 3 cut(s) 525, 1161, 2749
BstNSI RCATGY 2 cut(s) 2300, 2773
BstSCI CCNGG 3 cut(s) 523, 1159, 2747
BstSFI CTRYAG 5 cut(s) 450, 1603, 2010, 2610, 3110
BstSLI GKGCMC 1 cut(s) 1419
BstUI CGCG 2 cut(s) 2871, 3172
BstV2I GAAGAC 2 cut(s) 895, 1014
BstX2I RGATCY 5 cut(s) 625, 1484, 1494, 2390, 3106
BstYI RGATCY 5 cut(s) 625, 1484, 1494, 2390, 3106
BsuI GTATCC 1 cut(s) 2197
BsuRI GGCC 8 cut(s) 29, 173, 1053, 1199, 1399, 1962, 2095, 2195
BtgI CCRYGG 2 cut(s) 346, 2096
BtgZI GCGATG 2 cut(s) 387, 987
BtrI CACGTC 1 cut(s) 804
BtsCI GGATG 8 cut(s) 193, 589, 646, 743, 1035, 2085, 2888, 3028
BtsI GCAGTG 4 cut(s) 1639, 1833, 2238, 2795
BtsIMutI CAGTG 7 cut(s) 917, 1257, 1639, 1833, 2238, 2501, 2795
BveI ACCTGC 1 cut(s) 105
Cac8I GCNNGC 1 cut(s) 3095
CaiI CAGNNNCTG 3 cut(s) 1310, 2609, 2618
CfoI GCGC 2 cut(s) 3099, 3172
Cfr10I RCCGGY 1 cut(s) 1121
Cfr13I GGNCC 8 cut(s) 94, 753, 915, 1060, 1198, 1398, 1745, 2800
CseI GACGC 1 cut(s) 123
CsiI ACCWGGT 1 cut(s) 523
Csp6I GTAC 5 cut(s) 545, 1056, 1389, 2242, 2658
CviQI GTAC 5 cut(s) 545, 1056, 1389, 2242, 2658
DdeI CTNAG 7 cut(s) 51, 1348, 1918, 2441, 2926, 3018, 3089
DpnI GATC 8 cut(s) 627, 985, 1486, 1496, 2392, 2757, 2814, 3108
DpnII GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
DraI TTTAAA 2 cut(s) 1617, 2637
DriI GACNNNNNGTC 1 cut(s) 896
EaeI YGGCCR 3 cut(s) 171, 1051, 2093
Eam1104I CTCTTC 2 cut(s) 1964, 2184
Eam1105I GACNNNNNGTC 1 cut(s) 896
EarI CTCTTC 2 cut(s) 1964, 2184
EciI GGCGGA 1 cut(s) 2172
Eco130I CCWWGG 3 cut(s) 346, 1360, 2096
Eco147I AGGCCT 2 cut(s) 1962, 2195
Eco47I GGWCC 6 cut(s) 94, 753, 915, 1060, 1745, 2800
Eco57I CTGAAG 3 cut(s) 1781, 3009, 3144
Eco88I CYCGRG 1 cut(s) 1782
EcoO109I RGGNCCY 1 cut(s) 1745
EcoRII CCWGG 3 cut(s) 523, 1159, 2747
EcoT14I CCWWGG 3 cut(s) 346, 1360, 2096
EcoT22I ATGCAT 1 cut(s) 1144
ErhI CCWWGG 3 cut(s) 346, 1360, 2096
FalI AAGNNNNNCTT 5 cut(s) 34, 216, 248, 2617, 2649
FaqI GGGAC 6 cut(s) 193, 2767, 2786, 2807, 2936, 2968
FokI GGATG 8 cut(s) 200, 596, 653, 730, 1042, 2072, 2875, 3035
FspBI CTAG 6 cut(s) 296, 308, 1466, 1911, 2958, 3152
GlaI GCGC 2 cut(s) 3098, 3171
GsaI CCCAGC 3 cut(s) 1213, 2788, 2807
GsuI CTGGAG 3 cut(s) 666, 2394, 2849
HaeIII GGCC 8 cut(s) 29, 173, 1053, 1199, 1399, 1962, 2095, 2195
HapII CCGG 3 cut(s) 1122, 1583, 2186
HgaI GACGC 1 cut(s) 123
HhaI GCGC 2 cut(s) 3099, 3172
Hin1I GRCGYC 2 cut(s) 80, 134
Hin6I GCGC 2 cut(s) 3097, 3170
HinP1I GCGC 2 cut(s) 3097, 3170
HincII GTYRAC 3 cut(s) 34, 830, 1152
HindII GTYRAC 3 cut(s) 34, 830, 1152
HpaI GTTAAC 1 cut(s) 1152
HpaII CCGG 3 cut(s) 1122, 1583, 2186
HphI GGTGA 7 cut(s) 224, 409, 1267, 1989, 1997, 2302, 2425
Hpy166II GTNNAC 7 cut(s) 34, 830, 918, 1152, 1357, 1820, 2005
Hpy8I GTNNAC 7 cut(s) 34, 830, 918, 1152, 1357, 1820, 2005
HpyAV CCTTC 5 cut(s) 19, 218, 1535, 2759, 2912
HpyCH4III ACNGT 6 cut(s) 59, 218, 912, 1003, 1727, 2524
HpyCH4IV ACGT 2 cut(s) 80, 803
HpyF3I CTNAG 7 cut(s) 51, 1348, 1918, 2441, 2926, 3018, 3089
HpySE526I ACGT 2 cut(s) 80, 803
Hsp92I GRCGYC 2 cut(s) 80, 134
HspAI GCGC 2 cut(s) 3097, 3170
KspAI GTTAAC 1 cut(s) 1152
Kzo9I GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
LmnI GCTCC 4 cut(s) 1919, 2429, 2830, 3119
MabI ACCWGGT 1 cut(s) 523
MaeI CTAG 6 cut(s) 296, 308, 1466, 1911, 2958, 3152
MaeII ACGT 2 cut(s) 80, 803
MaeIII GTNAC 4 cut(s) 212, 864, 1699, 2872
MalI GATC 8 cut(s) 627, 985, 1486, 1496, 2392, 2757, 2814, 3108
MbiI CCGCTC 1 cut(s) 1516
MboI GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
MfeI CAATTG 5 cut(s) 248, 1116, 1166, 1424, 2237
MflI RGATCY 5 cut(s) 625, 1484, 1494, 2390, 3106
MhlI GDGCHC 2 cut(s) 730, 1419
MlsI TGGCCA 1 cut(s) 173
MluI ACGCGT 1 cut(s) 2869
MluNI TGGCCA 1 cut(s) 173
MlyI GAGTC 7 cut(s) 9, 1003, 2123, 2231, 2579, 2789, 2918
MmeI TCCRAC 3 cut(s) 487, 655, 1298
Mox20I TGGCCA 1 cut(s) 173
Mph1103I ATGCAT 1 cut(s) 1144
MroXI GAANNNNTTC 2 cut(s) 228, 2280
MscI TGGCCA 1 cut(s) 173
MslI CAYNNNNRTG 4 cut(s) 1176, 1677, 1928, 2898
Msp20I TGGCCA 1 cut(s) 173
MspA1I CMGCKG 2 cut(s) 163, 2606
MspI CCGG 3 cut(s) 1122, 1583, 2186
MspR9I CCNGG 3 cut(s) 525, 1161, 2749
MunI CAATTG 5 cut(s) 248, 1116, 1166, 1424, 2237
Mva1269I GAATGC 3 cut(s) 1507, 1672, 1844
MvaI CCWGG 3 cut(s) 525, 1161, 2749
MvnI CGCG 2 cut(s) 2871, 3172
NcoI CCATGG 2 cut(s) 346, 2096
NdeII GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
NlaIV GGNNCC 3 cut(s) 754, 1078, 2802
NmeAIII GCCGAG 3 cut(s) 499, 1175, 2071
NmuCI GTSAC 3 cut(s) 212, 1699, 2872
NsiI ATGCAT 1 cut(s) 1144
NspI RCATGY 2 cut(s) 2300, 2773
NspV TTCGAA 2 cut(s) 1651, 2284
PasI CCCWGGG 1 cut(s) 1160
PceI AGGCCT 2 cut(s) 1962, 2195
PctI GAATGC 3 cut(s) 1507, 1672, 1844
PdmI GAANNNNTTC 2 cut(s) 228, 2280
PfeI GAWTC 9 cut(s) 277, 317, 455, 677, 941, 1637, 2260, 2563, 2726
Pfl23II CGTACG 1 cut(s) 1055
PflFI GACNNNGTC 1 cut(s) 2798
PleI GAGTC 7 cut(s) 9, 1003, 2122, 2230, 2578, 2789, 2918
PpsI GAGTC 7 cut(s) 9, 1003, 2122, 2230, 2578, 2789, 2918
PpuMI RGGWCCY 1 cut(s) 1745
PsiI TTATAA 1 cut(s) 1659
Psp5II RGGWCCY 1 cut(s) 1745
Psp6I CCWGG 3 cut(s) 523, 1159, 2747
PspFI CCCAGC 3 cut(s) 1209, 2784, 2803
PspGI CCWGG 3 cut(s) 523, 1159, 2747
PspLI CGTACG 1 cut(s) 1055
PspN4I GGNNCC 3 cut(s) 754, 1078, 2802
PspPI GGNCC 8 cut(s) 94, 753, 915, 1060, 1198, 1398, 1745, 2800
PspPPI RGGWCCY 1 cut(s) 1745
PstI CTGCAG 4 cut(s) 454, 1607, 2014, 2614
PstNI CAGNNNCTG 3 cut(s) 1310, 2609, 2618
PsuI RGATCY 5 cut(s) 625, 1484, 1494, 2390, 3106
PsyI GACNNNGTC 1 cut(s) 2798
PvuII CAGCTG 1 cut(s) 2606
RsaI GTAC 5 cut(s) 546, 1057, 1390, 2243, 2659
RsaNI GTAC 5 cut(s) 545, 1056, 1389, 2242, 2658
RseI CAYNNNNRTG 4 cut(s) 1176, 1677, 1928, 2898
Sau3AI GATC 8 cut(s) 625, 983, 1484, 1494, 2390, 2755, 2812, 3106
Sau96I GGNCC 8 cut(s) 94, 753, 915, 1060, 1198, 1398, 1745, 2800
ScaI AGTACT 2 cut(s) 546, 2659
SchI GAGTC 7 cut(s) 9, 1003, 2123, 2231, 2579, 2789, 2918
ScrFI CCNGG 3 cut(s) 525, 1161, 2749
SduI GDGCHC 2 cut(s) 730, 1419
SexAI ACCWGGT 1 cut(s) 523
SfcI CTRYAG 5 cut(s) 450, 1603, 2010, 2610, 3110
SfuI TTCGAA 2 cut(s) 1651, 2284
SinI GGWCC 6 cut(s) 94, 753, 915, 1060, 1745, 2800
SmiMI CAYNNNNRTG 4 cut(s) 1176, 1677, 1928, 2898
SmlI CTYRAG 4 cut(s) 281, 1734, 1956, 3080
SmoI CTYRAG 4 cut(s) 281, 1734, 1956, 3080
SpeI ACTAGT 1 cut(s) 2957
SseBI AGGCCT 2 cut(s) 1962, 2195
SsiI CCGC 4 cut(s) 163, 1514, 1842, 2183
SspMI CTAG 6 cut(s) 296, 308, 1466, 1911, 2958, 3152
StuI AGGCCT 2 cut(s) 1962, 2195
StyD4I CCNGG 3 cut(s) 523, 1159, 2747
StyI CCWWGG 3 cut(s) 346, 1360, 2096
TaaI ACNGT 6 cut(s) 59, 218, 912, 1003, 1727, 2524
TaiI ACGT 2 cut(s) 83, 806
TaqI TCGA 8 cut(s) 150, 267, 320, 353, 1651, 2117, 2284, 2754
TaqII GACCGA 2 cut(s) 1718, 2788
TatI WGTACW 3 cut(s) 544, 2241, 2657
TauI GCSGC 1 cut(s) 166
TfiI GAWTC 9 cut(s) 277, 317, 455, 677, 941, 1637, 2260, 2563, 2726
TscAI CASTG 7 cut(s) 917, 1257, 1639, 1833, 2238, 2508, 2795
TseFI GTSAC 3 cut(s) 212, 1699, 2872
Tsp45I GTSAC 3 cut(s) 212, 1699, 2872
TspGWI ACGGA 2 cut(s) 1073, 3116
TspRI CASTG 7 cut(s) 917, 1257, 1639, 1833, 2238, 2508, 2795
Tth111I GACNNNGTC 1 cut(s) 2798
VpaK11BI GGWCC 6 cut(s) 94, 753, 915, 1060, 1745, 2800
XapI RAATTY 7 cut(s) 1036, 1105, 1618, 1653, 1688, 1903, 2151
XbaI TCTAGA 1 cut(s) 307
XceI RCATGY 2 cut(s) 2300, 2773
XcmI CCANNNNNNNNNTGG 4 cut(s) 181, 503, 638, 763
XmnI GAANNNNTTC 2 cut(s) 228, 2280
XspI CTAG 6 cut(s) 296, 308, 1466, 1911, 2958, 3152
ZraI GACGTC 1 cut(s) 81
ZrmI AGTACT 2 cut(s) 546, 2659
Zsp2I ATGCAT 1 cut(s) 1144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.