MD04G1155600.v1.1

WD40 repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0002511
Physical Location & Seq
Reverse (-)
24321118 .. 24336012
14895 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1155600.v1.1.491

Sequence Viewer

Length: 3357 bp
ATGCTCGCCAAGCGGCTTTTGCAGAAATCCATAAACGATTCTCAGCATAATTTGCCACACGGGGGTTTGACGGCTGAAGACTTGGACCTGCGAGTTGCAGTTCACTATGGCATCCCATCCACGGCGTCCATTCTTGCTTTCGACCCGATTCAGCGCCTTTTGGCCATTGGAACACTGGATGGGAGGATTAAAGTAATCGGTGATGATGGTATTGAAGGACTTTTTATATCCCCGAAGCAATTGCCTTACAAATACATTGAGTTTCTACAAAACCAGGGTTATTTGGTGAGCATCTTAAATGATAATGATATTCAGGTTTGGAATCTCGAGAGCAGGTCCCTAGTTTATTGTCTAGAGTGGGAAACAAATATAACCGCATTTTCTGTAATCCATGGCTCCAATTTAATGTATGTTGGTGATGAGTATGCCCTAGTGGCTGTGGTGAAGTATGATGCAGAGGAGGGAAAACTTTTGCGATTGCCATATCATATTTCTGCAAATTCTTTATATGAAGCTGCTGCGTTTCCATTTCCAATTGACCAACCTATAGTTGGAATTCTTCCCCAACTCTGTTCATCTGGAAATAGAGTATTGATTGCATATCAAAATGGGTTGGTTATTCTTTGGGATGTATCTGAAGCTAAAATAGTTTTTATTGGAGGTGGTAAGGATCTCCAGCTAAAGGATGGAGTTGTTAAATCTACAAATGAAGTCAATGTTGATTCTCCAGAAGATACATTGGAACATCAATTGGGAGACAAAGAGATAAGTGCTCTTTGTTGGGCATCTTCGAATGGCTCCATTCTGGCTGTGGGATACATAGATGGAGACATTTTATTCTGGAACATGTCATCTCCTGCTTCCGTCAAGGGTCAAAAATCTTTATCGCCATCTAATAATGTTGTGAAGTTACAATTATCATCTGCTGAAAGGAGACTTCCTGTCATAGTTTTACAGTGGTCCACAGATTATAAATCCCATAATGGTTGTGATGGCCAACTATTTATCTATGGTGGCGATGAAATTGGATCAGAAGAAGTTTTGACGGTTCTAACTCTTGAATGGTCACCTGGAATGGGGAATTTAAGATGTGTTGGTCGTACGGACCTCACCCTTACTGGCTCTTTTGCAGACATGATTTTGTTACCAAGTTCTGGGACAACTGGGGATAATCATAAAGCTGATGTTTTTGTTTTAACCAACCCTGGGCAATTGCATCTTTATGATGATGCTTGCCTCTCTGCCTTAATGTCCCAGAAAGAAAGGAGTCCATCTGTCTCTGCTTTGGAGTTTCCGGTGGTGATACCTACAACTGATCCAACCATGACTGTTGCCAAACTTAATAGGGTACCCACTGGGGAGAACTTATTAAAAGCTCTATCAGAGATATCCTCAGTTGTGAACCTTGGCTCAGCACAAACCCCATCAGCTGGTACAAAATGGCCCTTGACCGGGGGTGTTCCCAGTCAACTGTCTATTTCTGAGAATAATGGTATTGAGAGACTGTACCTAACAGGATATTCAGATGGATCTGTTCGGATATGGAATGCAACATATCCACTCTTCTCTTTTATCTGCCTTGTAGAAAGCGAGGTGCAAGGTATAAAAGTTGCTGGTTCAAGTGCTCCCGTATCACAAATGGATTTCTGCGCCTTCACTTTAAATCTGGCTGTTGGCAGTGAATGTGGTCTGGTTCGAATTTATAATCTGAAAGGCTGTTCGGATGGGGTAAAATTCATATATGTCACAGAAACCAAATGTGAAGTTCACGATTCGCCTCAAGCAAAAGGATTGCAATGCAGAGCTGTATTTAGTCTTACAAATTCCCCAGTTCAAGCACTTCAGTTTGTAAAGCATGGTGCTAAACTTGCTGTGGGATTTAAGTGTGGTCATGTTGCGGTGCTGGACACAAGTTCCTTTTCTGTATTGTTCTTTATAAAAGATGCATCTTTCTCCAGCTCTCCAGTCATTTCAATGACTTGGAAAGAACTTACAAATTCTCAATGGCTCCTGAAGAGCCCAAAGGTTTCCGAAACAAAATCAACAGCTAACCTAGCAGAGGAGGTAATGTTTGTCTTAACCAAGGATGCAAATATACATGTAATTGATGGAAATGCTGGTAACCTGATCATCCCTCAGCCATGGCACTTGAAAAAGGAGTCAATTGCACTTTCAATGTATGTTATAGATGGCAGAGTATCTATGTCCGAAAATGTGTCTGATGATAATCCACCCCAAGAGGCCTCCAAGGATTCTTCAACAAAGAATGAGCCTATGCCAGGCGATACTCCAATTGTTACAAATTCACATGAAACTGAGCATGACTTCAGCTCAGAAAGTACATACTCTGAAGAGAGATTGTTGAATTCGTTCATTTTGCTTTGTTGTGTGGATTCACTGCGGTTGTACTCAACAAAATCTGTGATTCAGGGAAACAATAAACCCATCCGAAAAGTGAAACATGCAAGACCTTGCATTTGGACAGCAACTTTTAAGAGAGTTGAAAAGGTTTCGGGATTGGTTTTGCTGTTTCAGACTGGAGAAATTGAGATCAGATCCATTCCTGATTTAGAATTAGTGAAAGAAAGCTCCTTGATGTCAATTCTAAGGTGGAATTGTAAGGCAAACATGGATAAGACAATGAGTGCCGATGATGCACATATTACACTGGTAAATGGGTATGAATCGGCATTCATCTCTATATTAGCTGTTGAGAATGATTTCAGGATTCCGGAGTCTTTGCCGTGTCTCCATGATAAAGTTGTTGCAGCTGCTGCAGACGCTGCACTCAGTGTCTCTTTGAATCAGAAGAAAAAACAGGGTACTGCACCTGGAATATTAGGTGGTATTGTTAAAGGCTTTAAAGGGGGAAAAATGGTCCAGAGTGGAGATCATACTGCAACTCCTAAATCAACTTTCGATCATTTAGAGGGCGTGTTTTGGAAGTCTCAACTGTCAGAACCATCTCCGCCTGTAGATCATCAAGAAGTTTTGGAGCTTAATATAGATGACATTGAAATAGATGAACCTCTATCAGTAGCATCTACTTTATCACCACATGATGTCAAAGATGAAAAGAGAGAAGGGCAATCAGAAAGGGAAAAGTTATTTCAAGGTGGGACTGGTGATACAAAGCCCAGAGTTAGAACGGCCGAAGAAATTAGAGCTAAATATAGAAAGACTGAGGGTGCTTCTTCTGCGGCTTCTGAAGCACGAAATAAGCTCATGGAGAGGCAGGAAAAACTTGAGAAAATCAGCCGGCGTACTGAAGATCTGCAGAACGGGGCTGAAGACTTCTCATCAATGGCAAACGAGCTTGTCAAGAGATTGGAAGGTCGAAAATGGTGGCATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000137 GO:0000139 GO:0000902 GO:0000904 GO:0002791 GO:0003674 GO:0005096 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005795 GO:0005802 GO:0005856 GO:0005886 GO:0005938 GO:0006810 GO:0006892 GO:0006893 GO:0006996 GO:0007010 GO:0007275 GO:0007399 GO:0007409 GO:0008047 GO:0008150 GO:0009653 GO:0009987 GO:0010008 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016192 GO:0017016 GO:0017137 GO:0017157 GO:0019899 GO:0019900 GO:0019901 GO:0022008 GO:0022607 GO:0030029 GO:0030030 GO:0030036 GO:0030154 GO:0030182 GO:0030234 GO:0030695 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0031090 GO:0031175 GO:0031267 GO:0031410 GO:0031901 GO:0031982 GO:0031984 GO:0031985 GO:0032501 GO:0032502 GO:0032588 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043547 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048193 GO:0048468 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050708 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051046 GO:0051049 GO:0051179 GO:0051223 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0061564 GO:0065003 GO:0065007 GO:0065009 GO:0070201 GO:0071840 GO:0071944 GO:0090087 GO:0097708 GO:0098588 GO:0098772 GO:0098791 GO:0098805 GO:0098876 GO:0099568 GO:0120036 GO:0120039 GO:1903530
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANAPC4_WD40 Synaptobrevin

Protein Analysis

1119

Amino Acids

122.43

Weight (kDa)

5.37

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 972, 1704, 1937
Acc36I ACCTGC 2 cut(s) 96, 324
Acc65I GGTACC 1 cut(s) 1348
AccB1I GGYRCC 1 cut(s) 1348
AccB7I CCANNNNNTGG 2 cut(s) 1154, 1430
AccIII TCCGGA 1 cut(s) 2731
AciI CCGC 6 cut(s) 13, 375, 1898, 2401, 2969, 3200
AclWI GGATC 5 cut(s) 678, 1036, 1310, 1537, 2550
AcoI YGGCCR 3 cut(s) 162, 994, 3150
AcsI RAATTY 9 cut(s) 499, 555, 1081, 1698, 1733, 1822, 1996, 2302, 2365
AcuI CTGAAG 9 cut(s) 96, 657, 1826, 2033, 2311, 2370, 3228, 3288, 3309
AcyI GRCGYC 1 cut(s) 125
AdeI CACNNNGTG 1 cut(s) 2792
AfaI GTAC 8 cut(s) 1102, 1350, 1435, 1508, 2341, 2408, 2824, 3265
AflIII ACRYGT 2 cut(s) 846, 2098
AhdI GACNNNNNGTC 1 cut(s) 941
AjnI CCWGG 5 cut(s) 273, 1069, 1204, 2278, 2830
Alw21I GWGCWC 2 cut(s) 775, 1627
Alw26I GTCTC 8 cut(s) 750, 822, 928, 1282, 1495, 2753, 2800, 2952
AlwI GGATC 5 cut(s) 678, 1036, 1310, 1537, 2550
AlwNI CAGNNNCTG 2 cut(s) 2774, 2783
Ama87I CYCGRG 1 cut(s) 326
Aor13HI TCCGGA 1 cut(s) 2731
AoxI GGCC 5 cut(s) 162, 994, 1442, 2241, 3150
ApeKI GCWGC 6 cut(s) 515, 518, 2768, 2771, 2774, 2783
ApoI RAATTY 9 cut(s) 499, 555, 1081, 1698, 1733, 1822, 1996, 2302, 2365
ArsI GACNNNNNNTTYG 2 cut(s) 2460, 2492
Asp700I GAANNNNTTC 2 cut(s) 2369, 2720
Asp718I GGTACC 1 cut(s) 1348
AspLEI GCGC 2 cut(s) 156, 1652
AspS9I GGNCC 6 cut(s) 85, 336, 960, 1105, 1443, 2878
AsuC2I CCSGG 1 cut(s) 1453
AsuHPI GGTGA 9 cut(s) 212, 298, 428, 454, 1059, 1102, 1312, 3045, 3137
AsuII TTCGAA 2 cut(s) 791, 1696
AvaI CYCGRG 1 cut(s) 326
AvaII GGWCC 5 cut(s) 85, 336, 960, 1105, 2878
BalI TGGCCA 2 cut(s) 164, 996
BanI GGYRCC 1 cut(s) 1348
BanII GRGCYC 1 cut(s) 2021
BbsI GAAGAC 2 cut(s) 84, 3297
Bbv12I GWGCWC 2 cut(s) 775, 1627
BbvCI CCTCAGC 1 cut(s) 2136
BbvI GCAGC 6 cut(s) 502, 505, 2758, 2761, 2770, 2780
BceAI ACGGC 4 cut(s) 87, 138, 2728, 3165
BcgI CGANNNNNNTGC 2 cut(s) 223, 257
BciT130I CCWGG 5 cut(s) 275, 1071, 1206, 2280, 2832
BciVI GTATCC 1 cut(s) 809
BclI TGATCA 1 cut(s) 2127
BcnI CCSGG 1 cut(s) 1453
BcoDI GTCTC 8 cut(s) 750, 822, 928, 1282, 1495, 2753, 2800, 2952
BfaI CTAG 4 cut(s) 341, 353, 431, 2054
BfmI CTRYAG 4 cut(s) 546, 2775, 2973, 3275
BfoI RGCGCY 1 cut(s) 157
BfuAI ACCTGC 2 cut(s) 96, 324
BfuI GTATCC 1 cut(s) 809
BglI GCCNNNNNGGC 1 cut(s) 434
BglII AGATCT 1 cut(s) 3271
BisI GCNGC 8 cut(s) 14, 516, 519, 2769, 2772, 2775, 2784, 3201
BlpI GCTNAGC 1 cut(s) 1411
BlsI GCNGC 8 cut(s) 15, 517, 520, 2770, 2773, 2776, 2785, 3202
Bme1390I CCNGG 6 cut(s) 275, 1071, 1206, 1453, 2280, 2832
Bme18I GGWCC 5 cut(s) 85, 336, 960, 1105, 2878
BmeRI GACNNNNNGTC 1 cut(s) 941
BmeT110I CYCGRG 1 cut(s) 326
BmgT120I GGNCC 6 cut(s) 85, 336, 960, 1105, 1443, 2878
BmiI GGNNCC 5 cut(s) 338, 397, 799, 1350, 2009
BmrFI CCNGG 6 cut(s) 275, 1071, 1206, 1453, 2280, 2832
BmrI ACTGGG 4 cut(s) 1173, 1365, 1458, 1823
BmuI ACTGGG 4 cut(s) 1173, 1365, 1458, 1823
BpiI GAAGAC 2 cut(s) 84, 3297
BplI GAGNNNNNCTC 2 cut(s) 1376, 1408
BpmI CTGGAG 5 cut(s) 659, 711, 1939, 1947, 2559
Bpu10I CCTNAGC 1 cut(s) 2136
Bpu1102I GCTNAGC 1 cut(s) 1411
Bpu14I TTCGAA 2 cut(s) 791, 1696
BpuEI CTTGAG 2 cut(s) 1764, 3266
BpuMI CCSGG 1 cut(s) 1453
BsaBI GATNNNNATC 1 cut(s) 2226
BsaHI GRCGYC 1 cut(s) 125
BsaWI WCCGGW 2 cut(s) 1294, 2731
BsaXI ACNNNNNCTCC 4 cut(s) 2054, 2084, 2887, 2917
Bse118I RCCGGY 1 cut(s) 3258
Bse3DI GCAATG 1 cut(s) 1802
Bse8I GATNNNNATC 1 cut(s) 2226
BseAI TCCGGA 1 cut(s) 2731
BseBI CCWGG 5 cut(s) 275, 1071, 1206, 2280, 2832
BseGI GGATG 9 cut(s) 111, 116, 184, 634, 691, 1729, 2092, 2130, 2445
BseJI GATNNNNATC 1 cut(s) 2226
BseMI GCAATG 1 cut(s) 1802
BseMII CTCAG 9 cut(s) 56, 1407, 1425, 1473, 2150, 2307, 2346, 2803, 3174
BseRI GAGGAG 2 cut(s) 473, 2075
BseX3I CGGCCG 1 cut(s) 3150
BseXI GCAGC 6 cut(s) 502, 505, 2758, 2761, 2770, 2780
BsgI GTGCAG 2 cut(s) 2769, 2811
Bsh1285I CGRYCG 1 cut(s) 3153
BshFI GGCC 5 cut(s) 164, 996, 1444, 2243, 3152
BshNI GGYRCC 1 cut(s) 1348
BsiEI CGRYCG 1 cut(s) 3153
BsiHKAI GWGCWC 2 cut(s) 775, 1627
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 4 cut(s) 1295, 1452, 2732, 3259
BsiWI CGTACG 1 cut(s) 1100
BslFI GGGAC 4 cut(s) 322, 1171, 1237, 3133
BsmAI GTCTC 8 cut(s) 750, 822, 928, 1282, 1495, 2753, 2800, 2952
BsmFI GGGAC 4 cut(s) 322, 1171, 1237, 3133
BsmI GAATGC 2 cut(s) 1552, 2690
BsnI GGCC 5 cut(s) 164, 996, 1444, 2243, 3152
BsoBI CYCGRG 1 cut(s) 326
Bsp119I TTCGAA 2 cut(s) 791, 1696
Bsp1286I GDGCHC 3 cut(s) 775, 1627, 2021
Bsp13I TCCGGA 1 cut(s) 2731
Bsp1720I GCTNAGC 1 cut(s) 1411
Bsp19I CCATGG 2 cut(s) 391, 2141
BspACI CCGC 6 cut(s) 13, 375, 1898, 2401, 2969, 3200
BspANI GGCC 5 cut(s) 164, 996, 1444, 2243, 3152
BspCNI CTCAG 9 cut(s) 55, 1406, 1424, 1474, 2149, 2308, 2345, 2802, 3175
BspEI TCCGGA 1 cut(s) 2731
BspLI GGNNCC 5 cut(s) 338, 397, 799, 1350, 2009
BspMAI CTGCAG 2 cut(s) 2779, 3279
BspMI ACCTGC 2 cut(s) 96, 324
BspPI GGATC 5 cut(s) 678, 1036, 1310, 1537, 2550
BspQI GCTCTTC 1 cut(s) 2009
BspT104I TTCGAA 2 cut(s) 791, 1696
BspT107I GGYRCC 1 cut(s) 1348
BsrDI GCAATG 1 cut(s) 1802
BsrFI RCCGGY 1 cut(s) 3258
BssAI RCCGGY 1 cut(s) 3258
BssNI GRCGYC 1 cut(s) 125
BssT1I CCWWGG 5 cut(s) 391, 1405, 2082, 2141, 2247
Bst2UI CCWGG 5 cut(s) 275, 1071, 1206, 2280, 2832
Bst4CI ACNGT 6 cut(s) 957, 1048, 1330, 1473, 1506, 2955
Bst6I CTCTTC 3 cut(s) 1568, 2009, 2346
BstACI GRCGYC 1 cut(s) 125
BstAPI GCANNNNNTGC 3 cut(s) 52, 2774, 2783
BstBI TTCGAA 2 cut(s) 791, 1696
BstC8I GCNNGC 3 cut(s) 6, 1234, 3260
BstDSI CCRYGG 3 cut(s) 120, 391, 2141
BstEII GGTNACC 2 cut(s) 1065, 2120
BstENI CCTNNNNNAGG 2 cut(s) 2057, 2277
BstF5I GGATG 9 cut(s) 111, 116, 184, 634, 691, 1729, 2092, 2130, 2445
BstH2I RGCGCY 1 cut(s) 157
BstHHI GCGC 2 cut(s) 156, 1652
BstMAI GTCTC 8 cut(s) 750, 822, 928, 1282, 1495, 2753, 2800, 2952
BstMCI CGRYCG 1 cut(s) 3153
BstNI CCWGG 5 cut(s) 275, 1071, 1206, 2280, 2832
BstNSI RCATGY 3 cut(s) 850, 2102, 2465
BstPI GGTNACC 2 cut(s) 1065, 2120
BstSCI CCNGG 6 cut(s) 273, 1069, 1204, 1451, 2278, 2830
BstSFI CTRYAG 4 cut(s) 546, 2775, 2973, 3275
BstV1I GCAGC 6 cut(s) 502, 505, 2758, 2761, 2770, 2780
BstV2I GAAGAC 2 cut(s) 84, 3297
BstX2I RGATCY 4 cut(s) 670, 1529, 2555, 3271
BstYI RGATCY 4 cut(s) 670, 1529, 2555, 3271
BstZI CGGCCG 1 cut(s) 3150
BsuI GTATCC 1 cut(s) 809
BsuRI GGCC 5 cut(s) 164, 996, 1444, 2243, 3152
BtgI CCRYGG 3 cut(s) 120, 391, 2141
BtgZI GCGATG 1 cut(s) 1032
BtsCI GGATG 9 cut(s) 111, 116, 184, 634, 691, 1729, 2092, 2130, 2445
BtsI GCAGTG 2 cut(s) 1684, 2396
BtsIMutI CAGTG 7 cut(s) 173, 962, 1353, 1684, 2396, 2666, 2797
BveI ACCTGC 2 cut(s) 96, 324
Cac8I GCNNGC 3 cut(s) 6, 1234, 3260
CaiI CAGNNNCTG 2 cut(s) 2774, 2783
CfoI GCGC 2 cut(s) 156, 1652
Cfr10I RCCGGY 1 cut(s) 3258
Cfr13I GGNCC 6 cut(s) 85, 336, 960, 1105, 1443, 2878
CseI GACGC 2 cut(s) 114, 2789
Csp6I GTAC 8 cut(s) 1101, 1349, 1434, 1507, 2340, 2407, 2823, 3264
CviQI GTAC 8 cut(s) 1101, 1349, 1434, 1507, 2340, 2407, 2823, 3264
DraI TTTAAA 2 cut(s) 1662, 2863
DraIII CACNNNGTG 1 cut(s) 2792
DriI GACNNNNNGTC 1 cut(s) 941
EaeI YGGCCR 3 cut(s) 162, 994, 3150
EagI CGGCCG 1 cut(s) 3150
Eam1104I CTCTTC 3 cut(s) 1568, 2009, 2346
Eam1105I GACNNNNNGTC 1 cut(s) 941
EarI CTCTTC 3 cut(s) 1568, 2009, 2346
EciI GGCGGA 1 cut(s) 2958
EclXI CGGCCG 1 cut(s) 3150
Eco130I CCWWGG 5 cut(s) 391, 1405, 2082, 2141, 2247
Eco147I AGGCCT 1 cut(s) 2243
Eco24I GRGCYC 1 cut(s) 2021
Eco32I GATATC 1 cut(s) 1389
Eco47I GGWCC 5 cut(s) 85, 336, 960, 1105, 2878
Eco52I CGGCCG 1 cut(s) 3150
Eco57I CTGAAG 9 cut(s) 96, 657, 1826, 2033, 2311, 2370, 3228, 3288, 3309
Eco88I CYCGRG 1 cut(s) 326
Eco91I GGTNACC 2 cut(s) 1065, 2120
EcoNI CCTNNNNNAGG 2 cut(s) 2057, 2277
EcoO109I RGGNCCY 1 cut(s) 336
EcoO65I GGTNACC 2 cut(s) 1065, 2120
EcoRI GAATTC 2 cut(s) 555, 2365
EcoRII CCWGG 5 cut(s) 273, 1069, 1204, 2278, 2830
EcoRV GATATC 1 cut(s) 1389
EcoT14I CCWWGG 5 cut(s) 391, 1405, 2082, 2141, 2247
EcoT22I ATGCAT 1 cut(s) 1948
EcoT38I GRGCYC 1 cut(s) 2021
ErhI CCWWGG 5 cut(s) 391, 1405, 2082, 2141, 2247
FaqI GGGAC 4 cut(s) 322, 1171, 1237, 3133
FbaI TGATCA 1 cut(s) 2127
Fnu4HI GCNGC 8 cut(s) 14, 516, 519, 2769, 2772, 2775, 2784, 3201
FokI GGATG 9 cut(s) 98, 103, 191, 641, 698, 1736, 2099, 2117, 2432
FriOI GRGCYC 1 cut(s) 2021
Fsp4HI GCNGC 8 cut(s) 14, 516, 519, 2769, 2772, 2775, 2784, 3201
FspBI CTAG 4 cut(s) 341, 353, 431, 2054
GlaI GCGC 2 cut(s) 155, 1651
GluI GCNGC 8 cut(s) 14, 516, 519, 2769, 2772, 2775, 2784, 3201
GsuI CTGGAG 5 cut(s) 659, 711, 1939, 1947, 2559
HaeII RGCGCY 1 cut(s) 157
HaeIII GGCC 5 cut(s) 164, 996, 1444, 2243, 3152
HapII CCGG 4 cut(s) 1295, 1452, 2732, 3259
HgaI GACGC 2 cut(s) 114, 2789
HhaI GCGC 2 cut(s) 156, 1652
Hin1I GRCGYC 1 cut(s) 125
Hin6I GCGC 2 cut(s) 154, 1650
HinP1I GCGC 2 cut(s) 154, 1650
HincII GTYRAC 1 cut(s) 1469
HindII GTYRAC 1 cut(s) 1469
HpaII CCGG 4 cut(s) 1295, 1452, 2732, 3259
HphI GGTGA 9 cut(s) 212, 298, 428, 454, 1059, 1102, 1312, 3045, 3137
Hpy166II GTNNAC 5 cut(s) 103, 963, 1402, 1469, 1768
Hpy8I GTNNAC 5 cut(s) 103, 963, 1402, 1469, 1768
HpyAV CCTTC 4 cut(s) 209, 1663, 3077, 3326
HpyCH4III ACNGT 6 cut(s) 957, 1048, 1330, 1473, 1506, 2955
Hsp92I GRCGYC 1 cut(s) 125
HspAI GCGC 2 cut(s) 154, 1650
Kpn2I TCCGGA 1 cut(s) 2731
KpnI GGTACC 1 cut(s) 1352
KroI GCCGGC 1 cut(s) 3258
KroNI GCCGGC 1 cut(s) 3260
Ksp22I TGATCA 1 cut(s) 2127
LguI GCTCTTC 1 cut(s) 2009
LmnI GCTCC 6 cut(s) 401, 803, 1630, 2013, 2594, 2995
Lsp1109I GCAGC 6 cut(s) 502, 505, 2758, 2761, 2770, 2780
MaeI CTAG 4 cut(s) 341, 353, 431, 2054
MaeIII GTNAC 6 cut(s) 909, 1065, 1143, 1744, 2120, 2296
MfeI CAATTG 6 cut(s) 239, 534, 749, 1211, 2163, 2292
MflI RGATCY 4 cut(s) 670, 1529, 2555, 3271
MhlI GDGCHC 3 cut(s) 775, 1627, 2021
MlsI TGGCCA 2 cut(s) 164, 996
MluNI TGGCCA 2 cut(s) 164, 996
MlyI GAGTC 3 cut(s) 1276, 2168, 2744
MmeI TCCRAC 2 cut(s) 532, 1343
Mox20I TGGCCA 2 cut(s) 164, 996
Mph1103I ATGCAT 1 cut(s) 1948
MroI TCCGGA 1 cut(s) 2731
MroNI GCCGGC 1 cut(s) 3258
MroXI GAANNNNTTC 2 cut(s) 2369, 2720
MscI TGGCCA 2 cut(s) 164, 996
MslI CAYNNNNRTG 2 cut(s) 1221, 1973
Msp20I TGGCCA 2 cut(s) 164, 996
MspA1I CMGCKG 2 cut(s) 1430, 2771
MspI CCGG 4 cut(s) 1295, 1452, 2732, 3259
MspR9I CCNGG 6 cut(s) 275, 1071, 1206, 1453, 2280, 2832
MunI CAATTG 6 cut(s) 239, 534, 749, 1211, 2163, 2292
Mva1269I GAATGC 2 cut(s) 1552, 2690
MvaI CCWGG 5 cut(s) 275, 1071, 1206, 2280, 2832
NaeI GCCGGC 1 cut(s) 3260
NciI CCSGG 1 cut(s) 1453
NcoI CCATGG 2 cut(s) 391, 2141
NgoMIV GCCGGC 1 cut(s) 3258
NlaIV GGNNCC 5 cut(s) 338, 397, 799, 1350, 2009
NmuCI GTSAC 2 cut(s) 1065, 1744
NsiI ATGCAT 1 cut(s) 1948
NspI RCATGY 3 cut(s) 850, 2102, 2465
NspV TTCGAA 2 cut(s) 791, 1696
PaeR7I CTCGAG 1 cut(s) 326
PasI CCCWGGG 1 cut(s) 1205
PceI AGGCCT 1 cut(s) 2243
PciI ACATGT 2 cut(s) 846, 2098
PciSI GCTCTTC 1 cut(s) 2009
PctI GAATGC 2 cut(s) 1552, 2690
PdiI GCCGGC 1 cut(s) 3260
PdmI GAANNNNTTC 2 cut(s) 2369, 2720
Pfl23II CGTACG 1 cut(s) 1100
PflMI CCANNNNNTGG 2 cut(s) 1154, 1430
PkrI GCNGC 8 cut(s) 15, 517, 520, 2770, 2773, 2776, 2785, 3202
PleI GAGTC 3 cut(s) 1275, 2167, 2743
PpsI GAGTC 3 cut(s) 1275, 2167, 2743
PpuMI RGGWCCY 1 cut(s) 336
PscI ACATGT 2 cut(s) 846, 2098
PsiI TTATAA 3 cut(s) 972, 1704, 1937
Psp5II RGGWCCY 1 cut(s) 336
Psp6I CCWGG 5 cut(s) 273, 1069, 1204, 2278, 2830
PspEI GGTNACC 2 cut(s) 1065, 2120
PspGI CCWGG 5 cut(s) 273, 1069, 1204, 2278, 2830
PspLI CGTACG 1 cut(s) 1100
PspN4I GGNNCC 5 cut(s) 338, 397, 799, 1350, 2009
PspPI GGNCC 6 cut(s) 85, 336, 960, 1105, 1443, 2878
PspPPI RGGWCCY 1 cut(s) 336
PstI CTGCAG 2 cut(s) 2779, 3279
PstNI CAGNNNCTG 2 cut(s) 2774, 2783
PsuI RGATCY 4 cut(s) 670, 1529, 2555, 3271
PvuII CAGCTG 2 cut(s) 1430, 2771
RsaI GTAC 8 cut(s) 1102, 1350, 1435, 1508, 2341, 2408, 2824, 3265
RsaNI GTAC 8 cut(s) 1101, 1349, 1434, 1507, 2340, 2407, 2823, 3264
RseI CAYNNNNRTG 2 cut(s) 1221, 1973
SapI GCTCTTC 1 cut(s) 2009
SatI GCNGC 8 cut(s) 14, 516, 519, 2769, 2772, 2775, 2784, 3201
Sau96I GGNCC 6 cut(s) 85, 336, 960, 1105, 1443, 2878
SchI GAGTC 3 cut(s) 1276, 2168, 2744
ScrFI CCNGG 6 cut(s) 275, 1071, 1206, 1453, 2280, 2832
SduI GDGCHC 3 cut(s) 775, 1627, 2021
SfcI CTRYAG 4 cut(s) 546, 2775, 2973, 3275
Sfr274I CTCGAG 1 cut(s) 326
SfuI TTCGAA 2 cut(s) 791, 1696
SinI GGWCC 5 cut(s) 85, 336, 960, 1105, 2878
SlaI CTCGAG 1 cut(s) 326
SmiMI CAYNNNNRTG 2 cut(s) 1221, 1973
SmlI CTYRAG 3 cut(s) 326, 1779, 3245
SmoI CTYRAG 3 cut(s) 326, 1779, 3245
SseBI AGGCCT 1 cut(s) 2243
SsiI CCGC 6 cut(s) 13, 375, 1898, 2401, 2969, 3200
SspI AATATT 1 cut(s) 2838
SspMI CTAG 4 cut(s) 341, 353, 431, 2054
StuI AGGCCT 1 cut(s) 2243
StyD4I CCNGG 6 cut(s) 273, 1069, 1204, 1451, 2278, 2830
StyI CCWWGG 5 cut(s) 391, 1405, 2082, 2141, 2247
TaaI ACNGT 6 cut(s) 957, 1048, 1330, 1473, 1506, 2955
TaqI TCGA 6 cut(s) 141, 327, 791, 1696, 2919, 3337
TatI WGTACW 2 cut(s) 2339, 2406
TauI GCSGC 2 cut(s) 16, 3203
TscAI CASTG 7 cut(s) 180, 962, 1360, 1684, 2403, 2673, 2797
TseFI GTSAC 2 cut(s) 1065, 1744
TseI GCWGC 6 cut(s) 515, 518, 2768, 2771, 2774, 2783
Tsp45I GTSAC 2 cut(s) 1065, 1744
TspGWI ACGGA 2 cut(s) 853, 1118
TspRI CASTG 7 cut(s) 180, 962, 1360, 1684, 2403, 2673, 2797
Van91I CCANNNNNTGG 2 cut(s) 1154, 1430
VpaK11BI GGWCC 5 cut(s) 85, 336, 960, 1105, 2878
XagI CCTNNNNNAGG 2 cut(s) 2057, 2277
XapI RAATTY 9 cut(s) 499, 555, 1081, 1698, 1733, 1822, 1996, 2302, 2365
XbaI TCTAGA 1 cut(s) 352
XceI RCATGY 3 cut(s) 850, 2102, 2465
XcmI CCANNNNNNNNNTGG 4 cut(s) 172, 548, 683, 808
XhoI CTCGAG 1 cut(s) 326
XmnI GAANNNNTTC 2 cut(s) 2369, 2720
XspI CTAG 4 cut(s) 341, 353, 431, 2054
Zsp2I ATGCAT 1 cut(s) 1948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.