Prupe.6G279100_v2.0.a1

WD40 repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0002511
Physical Location & Seq
Reverse (-)
26152197 .. 26161197
9001 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G279100.2

Sequence Viewer

Length: 3627 bp
ATGTTCGCCAAGCGCCTTTTACAGAAGGCCATCCACCAGTCTCAGCATAATATGTCACACGGAAATTTGACGTCAGCAGACTTGGACCTACGAGTCGCAGTTCACTATGGTATCCCATCGACGGCATCCATTCTTGCTTTCGACCCAATTCAGCGCCTTTTAGCCATTGGCACATTGGATGGGAGGATTAAAGTAATTGGTGGTGATGGTATTGAAGGACTTCTTATATCCCCGAAGCAACTGCCTTACAAATACATTGAGTTTCTACAAAACCAGGGTTATCTGGTGAGCATCTTAAATGATAATGATATTCAGGTTTGGAATCTCGAGAGCAGGTGCCTAGTTTATTGTCTAGAGTGGGAATCGAATATAACTGCTTTTTCCGTAATCAATGGCTCCAACTTAATGTATGTTGGCGATGATTATGCTCTAGTGGCTGTGATGAAGTATGATGCTGAGGAGGGAAAACTTTTGCAGTTGCCATATCATATTTCTGCAAATTCTTTAAGTGAAACTGCTGGGTTTCCATTTCCTACTGACCAACCTATAGTTGGAGTTCTTCCCCAACCTTGTTCATCTGGAAATAGAGTACTGATCGCATATCAAAATGGGTTGGTTATTCTTTGGGATGTATCTGAAGATCAAATCGTTTTTGTTGGAGGTGGTAAGGATCTCCAGCTAAAAGATGGAGTTGTTAAATCTACAAATGAAGTCAATATAGACTCTCCAGAAGAAACATTGGAACATCAACTGGGAGACAAAGAGATAAGTGCTCTTTGCTGGGCATCTTCCAATGGGTCCATTCTGGCTGTGGGATACATAGATGGAGACATTTTATTCTGGAACACGTCATCTTCTGCTTCCATCAAGGGTCAACAAGCACTGTCCCCATCTAATAATGTTGTGAAGTTACGATTATCATCCGCAGAAAGGAGACTTCCTGTCATTGTCTTGCAGTGGTCCAAAGATTATAAATCCCATAATGATTGTGATGGCCAACTGTTTATCTATGGTGGCGATGAAATAGGATCAGAAGAAGTTTTGACGGTTTTAACCCTTGAATGGTCACCTGGAATGGGGAATTTAAGATGTGTTGGCCGTACGGACCTTACCCTTACTGGCTCTTTTGCAGACATGATTTTATTACCAAGTTCTGGGACAACTGGGGGTAATCACAAAGCCGATGTTTTTGTTTTAACAAACCCTGGGCAACTGCATTTTTATGATGAGGCTAGCCTCTCTGCCTTAGTGTCCCAGAAAGAAAGGAACCTCTCTATTTCTGGTTTGGAGTTTCCGGTGGTGATACCTACAACTAATCCAACCATGATGGTTGCCAAACTTATTAGGGTACCCACTGGGGAGAACTTATTAAAGGCTCTATCAGAGATATCCTCAGTTGTGAACCGTGGCTCAATACCAAACCCATCAGCTGGTACAAAATGGCCCTTGACTGGGGGTGTGCCCAGTCAACTGTCTATTTCTAAGAATAATGGTATTGAGAGAGTGTACCTAGCAGGATATTCAGATGGATCTGTTCGGATATGGAATGCCACATATCCACTCCTATCTTTTATCTGTCTTGTACAAGGCAAGGAGCAAGGTATAAAAGTGGCTGGTTCAAGTGCTCCAGTATCAAGACTGGATTTCTGCGTTTTCACTTTAAATCTGGCTGTTGGCAATGAATGTGGTCTGGTTCAAATTTATAACCTCAAAGACTCTTCAGATGGGACAAAATTCCTCTTTGTCACACAAACCAAATCTGAAGTTCACAATTTGCCTCAAGGAAAAGGACCTCAATGCAGAGCTGTTTTAAGTCTTATTAATTCCCCAGTTCAAGCACTACAGTTTGTGAAGCATGGAGGTAAACTTGCTGTGGGATTTGAATGTGGTCACGTCGCGGTGCTGGACACCAGCTCCCTTACTGTATTGTTCTTTTTAAATGATGTATCTTTCTCTAGTTCCCCCACCATTTCAATGACTTGGAAAGAACTTACAAATTCTCAAGGCCATTTGAAGAGCCCAAAGCACTCAGAAACAAAAACAACAGTTTACCCCACAGAGGAAGTAATGTTCATCTTAACCAAGGATGCACATATACATGTAATTGATGGAAATACGGGTAACATGATCATCCCTCAGTCATGGCACTTGAAAAAGGAGTCCATTGCAATTTCAATGTATGTTATAGATGGCAGAATATCTGCCTCTAAAGTATCTGATGATAATCCTCCAGAAGAGGCCTCCAAGGATTCTTCAACCAAGAATGAGCCTGTGCCAGGCAGTTCTCCATTTGTTATAAATTCACCTGAGACTGAACAAAACTCCTCTTCAGAAAATCCATACTCTGAAGAAAGATTGTTGAATTCATTCATTTTGCTTTGTTGTGTGGATTCTCTGCGCTTGTACTCAACAAAATCTGTGATTCAGGGAAACAATAAACCCATTAGAAAAGTGAAGCATGCAAGACCTTGCATTTGGACAGCTACTTTTAAGAAAGCTGATAGGGTTTCGGGATTGGTTTTGCTGTTTCAGACTGGAGAAATTGAGATTAGATCTTTACCTGATTTAGAATTGGTGAAAGAAAGCTCCTTAATGTCAATTCTAAGGTGGAACTGTAAGGCAAACATGGATAAGACAATGAGTGCCGATGATTCACATTTTACACTGGCAAATGGATATGAATCCGCATTCGTCTCCATGTTAGCTGTTGAGAATGGTTTCAGGATTCCAGAGTCTTTGCCCTGTCTCCATGATAAAGTTGTTGCAGCTGCTGCAGATGCTGCATTGAGTGTCTCATTGAATCAGAAAAAGAAACGGGGTACTGCGCCTGGGTTATTAGGCATTGTCAAAGGGCTTAAAGGGGGGAAAATGGTCCATACTGGGGATTCTGCTGCAACTCCTAAATCAACTTTTGATCATTTAGAGGGCATGTTTTGGAAGTCCCAACAGTCAGGCCCATCTCCACATGTAGATCATCAAGAAGTTGTGGAGCTTAACATAGATGACATTGAAATAGATGAACCTTTATCCGTAGCATCTACTTCATCATCACACGATGTCAAGAGAGGTAAACTTTTTAAGGGGAATCAGAAAGGGAAAAGTTATTTCAAGGTGGGACTGGTGATACAAAGCCCAGACTTAGAACTGCCGAAGAAATTAGAGCTAAGTACAGAAAGGCTGAGGATGTTTCTTCTGTGGCTTCTCAAGCAAGAAATAAGCTCATGGAGAGAGGAGAAAAACTTGAGAGAATCAGCAGGCGCACTGAAGATCTGCAGAATGGGGCAGAAGACTTTGCATCACTGGCTAATGAGCTTGTCAAGACATTGGAAGGTCGAAAATGGTGGCATATTTAGAAAGTTCGGCTTTGTTTGCATTGTGTTTGAATTTCCATCTCCTGGATTACTGGTCCTGTCGAGAGAGGGGAGATTCAGAACCCTTCTGAAGCACCCGAAAGACGAGGTCATTCAATTAAGAACACCATCCGTAGCTTGTGATCCAGCAGATATTCAAGAGGTCGTTCTTCTACAGTGTAGAGAATTGTCATGCCATTGTTGCCTTTGTTGCAAAGTAATTTATGTAGCTAGGCTTCAGAACATTGCAAGCCGCATTTTAATTTTACACTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000137 GO:0000139 GO:0000902 GO:0000904 GO:0002791 GO:0003674 GO:0005096 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005795 GO:0005802 GO:0005856 GO:0005886 GO:0005938 GO:0006810 GO:0006892 GO:0006893 GO:0006996 GO:0007010 GO:0007275 GO:0007399 GO:0007409 GO:0008047 GO:0008150 GO:0009653 GO:0009987 GO:0010008 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016192 GO:0017016 GO:0017137 GO:0017157 GO:0019899 GO:0019900 GO:0019901 GO:0022008 GO:0022607 GO:0030029 GO:0030030 GO:0030036 GO:0030154 GO:0030182 GO:0030234 GO:0030695 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0031090 GO:0031175 GO:0031267 GO:0031410 GO:0031901 GO:0031982 GO:0031984 GO:0031985 GO:0032501 GO:0032502 GO:0032588 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043547 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044430 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048193 GO:0048468 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050708 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051046 GO:0051049 GO:0051179 GO:0051223 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0061564 GO:0065003 GO:0065007 GO:0065009 GO:0070201 GO:0071840 GO:0071944 GO:0090087 GO:0097708 GO:0098588 GO:0098772 GO:0098791 GO:0098805 GO:0098876 GO:0099568 GO:0120036 GO:0120039 GO:1903530
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANAPC4_WD40 Synaptobrevin

Protein Analysis

1209

Amino Acids

132.62

Weight (kDa)

6.48

Isoelectric Point (pI)

45.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 972, 1704, 2297
AarI CACCTGC 1 cut(s) 324
AasI GACNNNNNNGTC 1 cut(s) 92
AatII GACGTC 1 cut(s) 74
Acc36I ACCTGC 1 cut(s) 324
Acc65I GGTACC 1 cut(s) 1348
AccB1I GGYRCC 2 cut(s) 336, 1348
AccB7I CCANNNNNTGG 3 cut(s) 1154, 1430, 3395
AccII CGCG 1 cut(s) 1898
AciI CCGC 4 cut(s) 924, 1898, 2685, 3604
AclWI GGATC 4 cut(s) 678, 1036, 1537, 3488
AcoI YGGCCR 2 cut(s) 994, 1096
AcsI RAATTY 9 cut(s) 64, 499, 1081, 1698, 1733, 1996, 2299, 2362, 3383
AcuI CTGAAG 8 cut(s) 657, 1704, 1782, 2313, 2367, 3284, 3461, 3572
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 9 cut(s) 591, 1102, 1350, 1435, 1508, 1584, 2405, 2821, 3169
AflIII ACRYGT 3 cut(s) 846, 2098, 2965
AhdI GACNNNNNGTC 1 cut(s) 941
AjiI CACGTC 2 cut(s) 849, 1894
AjnI CCWGG 6 cut(s) 273, 1069, 1204, 2275, 2827, 3394
AloI GAACNNNNNNTCC 2 cut(s) 2054, 2086
Alw21I GWGCWC 2 cut(s) 775, 1627
Alw26I GTCTC 8 cut(s) 45, 750, 822, 928, 2303, 2698, 2750, 2797
AlwI GGATC 4 cut(s) 678, 1036, 1537, 3488
AlwNI CAGNNNCTG 2 cut(s) 2771, 2780
Ama87I CYCGRG 1 cut(s) 326
AoxI GGCC 7 cut(s) 27, 994, 1096, 1442, 2005, 2238, 2953
ApeKI GCWGC 5 cut(s) 2765, 2768, 2771, 2780, 2891
ApoI RAATTY 9 cut(s) 64, 499, 1081, 1698, 1733, 1996, 2299, 2362, 3383
ArsI GACNNNNNNTTYG 2 cut(s) 2457, 2489
AseI ATTAAT 1 cut(s) 1821
Asp700I GAANNNNTTC 3 cut(s) 219, 2366, 2717
Asp718I GGTACC 1 cut(s) 1348
AspLEI GCGC 5 cut(s) 15, 156, 2400, 2827, 3260
AspS9I GGNCC 9 cut(s) 85, 798, 960, 1105, 1443, 1790, 2872, 2954, 3406
AsuHPI GGTGA 7 cut(s) 215, 298, 1059, 1312, 2295, 2587, 3133
AsuNHI GCTAGC 1 cut(s) 1232
AvaI CYCGRG 1 cut(s) 326
AvaII GGWCC 7 cut(s) 85, 798, 960, 1105, 1790, 2872, 3406
BaeGI GKGCMC 1 cut(s) 1464
BaeI ACNNNNGTAYC 2 cut(s) 94, 127
BalI TGGCCA 1 cut(s) 996
BanI GGYRCC 2 cut(s) 336, 1348
BanII GRGCYC 1 cut(s) 2021
BarI GAAGNNNNNNTAC 2 cut(s) 3570, 3602
BbsI GAAGAC 1 cut(s) 3293
Bbv12I GWGCWC 2 cut(s) 775, 1627
BbvCI CCTCAGC 2 cut(s) 456, 3179
BbvI GCAGC 5 cut(s) 2755, 2758, 2767, 2777, 2878
BceAI ACGGC 2 cut(s) 138, 1083
BcgI CGANNNNNNTGC 4 cut(s) 223, 257, 407, 441
BciT130I CCWGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
BciVI GTATCC 2 cut(s) 122, 809
BclI TGATCA 2 cut(s) 2127, 2914
BcoDI GTCTC 8 cut(s) 45, 750, 822, 928, 2303, 2698, 2750, 2797
BfaI CTAG 7 cut(s) 341, 353, 431, 1233, 1511, 1956, 3582
BfmI CTRYAG 5 cut(s) 546, 1841, 2772, 3271, 3524
BfoI RGCGCY 2 cut(s) 16, 157
BfuAI ACCTGC 1 cut(s) 324
BfuI GTATCC 2 cut(s) 122, 809
BglII AGATCT 2 cut(s) 2552, 3267
BisI GCNGC 6 cut(s) 2766, 2769, 2772, 2781, 2892, 3604
BlsI GCNGC 6 cut(s) 2767, 2770, 2773, 2782, 2893, 3605
BmcAI AGTACT 1 cut(s) 591
Bme1390I CCNGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
Bme18I GGWCC 7 cut(s) 85, 798, 960, 1105, 1790, 2872, 3406
BmeRI GACNNNNNGTC 1 cut(s) 941
BmeT110I CYCGRG 1 cut(s) 326
BmgBI CACGTC 2 cut(s) 849, 1894
BmgT120I GGNCC 9 cut(s) 85, 798, 960, 1105, 1443, 1790, 2872, 2954, 3406
BmiI GGNNCC 5 cut(s) 338, 397, 799, 1268, 1350
BmrFI CCNGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
BmrI ACTGGG 7 cut(s) 761, 1173, 1365, 1458, 1461, 1823, 2889
BmsI GCATC 8 cut(s) 134, 300, 442, 794, 2077, 2767, 3044, 3304
BmtI GCTAGC 1 cut(s) 1236
BmuI ACTGGG 7 cut(s) 761, 1173, 1365, 1458, 1461, 1823, 2889
BpiI GAAGAC 1 cut(s) 3293
BplI GAGNNNNNCTC 2 cut(s) 1376, 1408
BpmI CTGGAG 5 cut(s) 659, 711, 1611, 2214, 2556
Bpu10I CCTNAGC 2 cut(s) 456, 3179
BpuEI CTTGAG 4 cut(s) 1764, 1986, 3188, 3262
BsaBI GATNNNNATC 3 cut(s) 919, 2223, 2680
BsaHI GRCGYC 1 cut(s) 71
BsaJI CCNNGG 7 cut(s) 274, 1204, 1205, 1405, 2082, 2244, 2828
BsaWI WCCGGW 1 cut(s) 1294
BsaXI ACNNNNNCTCC 2 cut(s) 1898, 1928
Bse3DI GCAATG 3 cut(s) 1684, 2163, 3594
Bse8I GATNNNNATC 3 cut(s) 919, 2223, 2680
BseBI CCWGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
BseDI CCNNGG 7 cut(s) 274, 1204, 1205, 1405, 2082, 2244, 2828
BseGI GGATG 9 cut(s) 30, 125, 184, 634, 920, 2092, 2130, 3189, 3479
BseJI GATNNNNATC 3 cut(s) 919, 2223, 2680
BseMI GCAATG 3 cut(s) 1684, 2163, 3594
BseMII CTCAG 7 cut(s) 56, 447, 1407, 2043, 2150, 2298, 3170
BseRI GAGGAG 3 cut(s) 473, 2314, 3245
BseSI GKGCMC 1 cut(s) 1464
BseXI GCAGC 5 cut(s) 2755, 2758, 2767, 2777, 2878
BseYI CCCAGC 2 cut(s) 518, 780
Bsh1236I CGCG 1 cut(s) 1898
BshFI GGCC 7 cut(s) 29, 996, 1098, 1444, 2007, 2240, 2955
BshNI GGYRCC 2 cut(s) 336, 1348
BsiHKAI GWGCWC 2 cut(s) 775, 1627
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 1 cut(s) 1295
BsiWI CGTACG 1 cut(s) 1100
BslFI GGGAC 6 cut(s) 871, 1171, 1237, 1741, 2926, 3129
BsmAI GTCTC 8 cut(s) 45, 750, 822, 928, 2303, 2698, 2750, 2797
BsmBI CGTCTC 1 cut(s) 2698
BsmFI GGGAC 6 cut(s) 871, 1171, 1237, 1741, 2926, 3129
BsmI GAATGC 2 cut(s) 1552, 2687
BsnI GGCC 7 cut(s) 29, 996, 1098, 1444, 2007, 2240, 2955
BsoBI CYCGRG 1 cut(s) 326
Bsp1286I GDGCHC 4 cut(s) 775, 1464, 1627, 2021
Bsp1407I TGTACA 1 cut(s) 1582
BspACI CCGC 4 cut(s) 924, 1898, 2685, 3604
BspANI GGCC 7 cut(s) 29, 996, 1098, 1444, 2007, 2240, 2955
BspCNI CTCAG 7 cut(s) 55, 448, 1406, 2042, 2149, 2299, 3171
BspFNI CGCG 1 cut(s) 1898
BspHI TCATGA 1 cut(s) 3623
BspLI GGNNCC 5 cut(s) 338, 397, 799, 1268, 1350
BspMAI CTGCAG 2 cut(s) 2776, 3275
BspMI ACCTGC 1 cut(s) 324
BspOI GCTAGC 1 cut(s) 1236
BspPI GGATC 4 cut(s) 678, 1036, 1537, 3488
BspQI GCTCTTC 1 cut(s) 2009
BspT107I GGYRCC 2 cut(s) 336, 1348
BsrDI GCAATG 3 cut(s) 1684, 2163, 3594
BsrGI TGTACA 1 cut(s) 1582
BssECI CCNNGG 7 cut(s) 274, 1204, 1205, 1405, 2082, 2244, 2828
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 2 cut(s) 2082, 2244
Bst2UI CCWGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
Bst6I CTCTTC 4 cut(s) 1723, 2009, 2229, 2332
BstACI GRCGYC 1 cut(s) 71
BstAPI GCANNNNNTGC 2 cut(s) 2771, 2780
BstAUI TGTACA 1 cut(s) 1582
BstC8I GCNNGC 4 cut(s) 1234, 2460, 3256, 3601
BstDSI CCRYGG 1 cut(s) 1405
BstEII GGTNACC 1 cut(s) 1065
BstENI CCTNNNNNAGG 1 cut(s) 2274
BstF5I GGATG 9 cut(s) 30, 125, 184, 634, 920, 2092, 2130, 3189, 3479
BstFNI CGCG 1 cut(s) 1898
BstH2I RGCGCY 2 cut(s) 16, 157
BstHHI GCGC 5 cut(s) 15, 156, 2400, 2827, 3260
BstMAI GTCTC 8 cut(s) 45, 750, 822, 928, 2303, 2698, 2750, 2797
BstMWI GCNNNNNNNGC 9 cut(s) 434, 2771, 2777, 2780, 3205, 3301, 3369, 3552, 3561
BstNI CCWGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
BstNSI RCATGY 4 cut(s) 2102, 2462, 2932, 2969
BstPI GGTNACC 1 cut(s) 1065
BstSCI CCNGG 6 cut(s) 273, 1069, 1204, 2275, 2827, 3394
BstSFI CTRYAG 5 cut(s) 546, 1841, 2772, 3271, 3524
BstSLI GKGCMC 1 cut(s) 1464
BstUI CGCG 1 cut(s) 1898
BstV1I GCAGC 5 cut(s) 2755, 2758, 2767, 2777, 2878
BstV2I GAAGAC 1 cut(s) 3293
BstX2I RGATCY 4 cut(s) 670, 1529, 2552, 3267
BstYI RGATCY 4 cut(s) 670, 1529, 2552, 3267
BsuI GTATCC 2 cut(s) 122, 809
BsuRI GGCC 7 cut(s) 29, 996, 1098, 1444, 2007, 2240, 2955
BtgI CCRYGG 1 cut(s) 1405
BtgZI GCGATG 2 cut(s) 432, 1032
BtrI CACGTC 2 cut(s) 849, 1894
BtsCI GGATG 9 cut(s) 30, 125, 184, 634, 920, 2092, 2130, 3189, 3479
BtsI GCAGTG 1 cut(s) 962
BtsIMutI CAGTG 7 cut(s) 881, 962, 1353, 2663, 3260, 3298, 3533
BveI ACCTGC 1 cut(s) 324
Cac8I GCNNGC 4 cut(s) 1234, 2460, 3256, 3601
CaiI CAGNNNCTG 2 cut(s) 2771, 2780
CciI TCATGA 1 cut(s) 3623
CfoI GCGC 5 cut(s) 15, 156, 2400, 2827, 3260
Cfr13I GGNCC 9 cut(s) 85, 798, 960, 1105, 1443, 1790, 2872, 2954, 3406
Csp6I GTAC 9 cut(s) 590, 1101, 1349, 1434, 1507, 1583, 2404, 2820, 3168
CspCI CAANNNNNGTGG 2 cut(s) 1666, 1701
CviQI GTAC 9 cut(s) 590, 1101, 1349, 1434, 1507, 1583, 2404, 2820, 3168
DraI TTTAAA 2 cut(s) 1662, 1938
DrdI GACNNNNNNGTC 1 cut(s) 92
DriI GACNNNNNGTC 1 cut(s) 941
DseDI GACNNNNNNGTC 1 cut(s) 92
EaeI YGGCCR 2 cut(s) 994, 1096
Eam1104I CTCTTC 4 cut(s) 1723, 2009, 2229, 2332
Eam1105I GACNNNNNGTC 1 cut(s) 941
EarI CTCTTC 4 cut(s) 1723, 2009, 2229, 2332
Eco130I CCWWGG 2 cut(s) 2082, 2244
Eco147I AGGCCT 1 cut(s) 2240
Eco24I GRGCYC 1 cut(s) 2021
Eco32I GATATC 1 cut(s) 1389
Eco47I GGWCC 7 cut(s) 85, 798, 960, 1105, 1790, 2872, 3406
Eco57I CTGAAG 8 cut(s) 657, 1704, 1782, 2313, 2367, 3284, 3461, 3572
Eco88I CYCGRG 1 cut(s) 326
Eco91I GGTNACC 1 cut(s) 1065
EcoNI CCTNNNNNAGG 1 cut(s) 2274
EcoO109I RGGNCCY 1 cut(s) 1790
EcoO65I GGTNACC 1 cut(s) 1065
EcoRI GAATTC 1 cut(s) 2362
EcoRII CCWGG 6 cut(s) 273, 1069, 1204, 2275, 2827, 3394
EcoRV GATATC 1 cut(s) 1389
EcoT14I CCWWGG 2 cut(s) 2082, 2244
EcoT38I GRGCYC 1 cut(s) 2021
ErhI CCWWGG 2 cut(s) 2082, 2244
Esp3I CGTCTC 1 cut(s) 2698
FalI AAGNNNNNCTT 4 cut(s) 207, 239, 3347, 3379
FaqI GGGAC 6 cut(s) 871, 1171, 1237, 1741, 2926, 3129
FbaI TGATCA 2 cut(s) 2127, 2914
Fnu4HI GCNGC 6 cut(s) 2766, 2769, 2772, 2781, 2892, 3604
FokI GGATG 9 cut(s) 17, 112, 191, 641, 907, 2099, 2117, 3196, 3466
FriOI GRGCYC 1 cut(s) 2021
Fsp4HI GCNGC 6 cut(s) 2766, 2769, 2772, 2781, 2892, 3604
FspBI CTAG 7 cut(s) 341, 353, 431, 1233, 1511, 1956, 3582
GlaI GCGC 5 cut(s) 14, 155, 2399, 2826, 3259
GluI GCNGC 6 cut(s) 2766, 2769, 2772, 2781, 2892, 3604
GsaI CCCAGC 2 cut(s) 522, 784
GsuI CTGGAG 5 cut(s) 659, 711, 1611, 2214, 2556
HaeII RGCGCY 2 cut(s) 16, 157
HaeIII GGCC 7 cut(s) 29, 996, 1098, 1444, 2007, 2240, 2955
HapII CCGG 1 cut(s) 1295
HhaI GCGC 5 cut(s) 15, 156, 2400, 2827, 3260
Hin1I GRCGYC 1 cut(s) 71
Hin6I GCGC 5 cut(s) 13, 154, 2398, 2825, 3258
HinP1I GCGC 5 cut(s) 13, 154, 2398, 2825, 3258
HincII GTYRAC 2 cut(s) 875, 1469
HindII GTYRAC 2 cut(s) 875, 1469
HpaII CCGG 1 cut(s) 1295
HphI GGTGA 7 cut(s) 215, 298, 1059, 1312, 2295, 2587, 3133
Hpy166II GTNNAC 9 cut(s) 103, 875, 1402, 1469, 1507, 1768, 1865, 2050, 3071
Hpy8I GTNNAC 9 cut(s) 103, 875, 1402, 1469, 1507, 1768, 1865, 2050, 3071
Hpy99I CGWCG 2 cut(s) 124, 1898
HpyAV CCTTC 4 cut(s) 19, 209, 3322, 3446
HpyCH4IV ACGT 3 cut(s) 71, 848, 1893
HpyF10VI GCNNNNNNNGC 9 cut(s) 434, 2771, 2777, 2780, 3205, 3301, 3369, 3552, 3561
HpySE526I ACGT 3 cut(s) 71, 848, 1893
Hsp92I GRCGYC 1 cut(s) 71
HspAI GCGC 5 cut(s) 13, 154, 2398, 2825, 3258
KpnI GGTACC 1 cut(s) 1352
Ksp22I TGATCA 2 cut(s) 2127, 2914
LguI GCTCTTC 1 cut(s) 2009
LmnI GCTCC 6 cut(s) 401, 1594, 1630, 1919, 2591, 2989
Lsp1109I GCAGC 5 cut(s) 2755, 2758, 2767, 2777, 2878
LweI GCATC 8 cut(s) 134, 300, 442, 794, 2077, 2767, 3044, 3304
MaeI CTAG 7 cut(s) 341, 353, 431, 1233, 1511, 1956, 3582
MaeII ACGT 3 cut(s) 71, 848, 1893
MaeIII GTNAC 6 cut(s) 54, 909, 1065, 1744, 1889, 2120
MflI RGATCY 4 cut(s) 670, 1529, 2552, 3267
MhlI GDGCHC 4 cut(s) 775, 1464, 1627, 2021
MlsI TGGCCA 1 cut(s) 996
MluNI TGGCCA 1 cut(s) 996
MlyI GAGTC 5 cut(s) 102, 716, 1709, 2168, 2741
MmeI TCCRAC 4 cut(s) 423, 532, 637, 1343
Mox20I TGGCCA 1 cut(s) 996
MroXI GAANNNNTTC 3 cut(s) 219, 2366, 2717
MscI TGGCCA 1 cut(s) 996
MslI CAYNNNNRTG 3 cut(s) 1221, 1973, 2097
Msp20I TGGCCA 1 cut(s) 996
MspA1I CMGCKG 2 cut(s) 1430, 2768
MspI CCGG 1 cut(s) 1295
MspR9I CCNGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
Mva1269I GAATGC 2 cut(s) 1552, 2687
MvaI CCWGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
MvnI CGCG 1 cut(s) 1898
MwoI GCNNNNNNNGC 9 cut(s) 434, 2771, 2777, 2780, 3205, 3301, 3369, 3552, 3561
NheI GCTAGC 1 cut(s) 1232
NlaIV GGNNCC 5 cut(s) 338, 397, 799, 1268, 1350
NmuCI GTSAC 4 cut(s) 54, 1065, 1744, 1889
NspI RCATGY 4 cut(s) 2102, 2462, 2932, 2969
PaeI GCATGC 1 cut(s) 2462
PaeR7I CTCGAG 1 cut(s) 326
PagI TCATGA 1 cut(s) 3623
PaqCI CACCTGC 1 cut(s) 324
PasI CCCWGGG 1 cut(s) 1205
PceI AGGCCT 1 cut(s) 2240
PciI ACATGT 2 cut(s) 2098, 2965
PciSI GCTCTTC 1 cut(s) 2009
PctI GAATGC 2 cut(s) 1552, 2687
PdmI GAANNNNTTC 3 cut(s) 219, 2366, 2717
Pfl23II CGTACG 1 cut(s) 1100
PflFI GACNNNGTC 1 cut(s) 3458
PflMI CCANNNNNTGG 3 cut(s) 1154, 1430, 3395
PfoI TCCNGGA 1 cut(s) 3394
PkrI GCNGC 6 cut(s) 2767, 2770, 2773, 2782, 2893, 3605
PleI GAGTC 5 cut(s) 101, 716, 1709, 2167, 2740
PpsI GAGTC 5 cut(s) 101, 716, 1709, 2167, 2740
PpuMI RGGWCCY 1 cut(s) 1790
PscI ACATGT 2 cut(s) 2098, 2965
PshBI ATTAAT 1 cut(s) 1821
PsiI TTATAA 3 cut(s) 972, 1704, 2297
Psp5II RGGWCCY 1 cut(s) 1790
Psp6I CCWGG 6 cut(s) 273, 1069, 1204, 2275, 2827, 3394
PspEI GGTNACC 1 cut(s) 1065
PspFI CCCAGC 2 cut(s) 518, 780
PspGI CCWGG 6 cut(s) 273, 1069, 1204, 2275, 2827, 3394
PspLI CGTACG 1 cut(s) 1100
PspN4I GGNNCC 5 cut(s) 338, 397, 799, 1268, 1350
PspPI GGNCC 9 cut(s) 85, 798, 960, 1105, 1443, 1790, 2872, 2954, 3406
PspPPI RGGWCCY 1 cut(s) 1790
PstI CTGCAG 2 cut(s) 2776, 3275
PstNI CAGNNNCTG 2 cut(s) 2771, 2780
PsuI RGATCY 4 cut(s) 670, 1529, 2552, 3267
PsyI GACNNNGTC 1 cut(s) 3458
PvuII CAGCTG 2 cut(s) 1430, 2768
RsaI GTAC 9 cut(s) 591, 1102, 1350, 1435, 1508, 1584, 2405, 2821, 3169
RsaNI GTAC 9 cut(s) 590, 1101, 1349, 1434, 1507, 1583, 2404, 2820, 3168
RseI CAYNNNNRTG 3 cut(s) 1221, 1973, 2097
SapI GCTCTTC 1 cut(s) 2009
SatI GCNGC 6 cut(s) 2766, 2769, 2772, 2781, 2892, 3604
Sau96I GGNCC 9 cut(s) 85, 798, 960, 1105, 1443, 1790, 2872, 2954, 3406
ScaI AGTACT 1 cut(s) 591
SchI GAGTC 5 cut(s) 102, 716, 1709, 2168, 2741
ScrFI CCNGG 6 cut(s) 275, 1071, 1206, 2277, 2829, 3396
SduI GDGCHC 4 cut(s) 775, 1464, 1627, 2021
SfaNI GCATC 8 cut(s) 134, 300, 442, 794, 2077, 2767, 3044, 3304
SfcI CTRYAG 5 cut(s) 546, 1841, 2772, 3271, 3524
Sfr274I CTCGAG 1 cut(s) 326
SinI GGWCC 7 cut(s) 85, 798, 960, 1105, 1790, 2872, 3406
SlaI CTCGAG 1 cut(s) 326
SmiMI CAYNNNNRTG 3 cut(s) 1221, 1973, 2097
SmlI CTYRAG 5 cut(s) 326, 1779, 2001, 3203, 3241
SmoI CTYRAG 5 cut(s) 326, 1779, 2001, 3203, 3241
SphI GCATGC 1 cut(s) 2462
SseBI AGGCCT 1 cut(s) 2240
SsiI CCGC 4 cut(s) 924, 1898, 2685, 3604
SspMI CTAG 7 cut(s) 341, 353, 431, 1233, 1511, 1956, 3582
StuI AGGCCT 1 cut(s) 2240
StyD4I CCNGG 6 cut(s) 273, 1069, 1204, 2275, 2827, 3394
StyI CCWWGG 2 cut(s) 2082, 2244
TaiI ACGT 3 cut(s) 74, 851, 1896
TaqI TCGA 6 cut(s) 119, 141, 327, 365, 3333, 3413
TatI WGTACW 4 cut(s) 589, 1582, 2403, 3167
TauI GCSGC 1 cut(s) 3606
TscAI CASTG 7 cut(s) 888, 962, 1360, 2670, 3267, 3305, 3533
TseFI GTSAC 4 cut(s) 54, 1065, 1744, 1889
TseI GCWGC 5 cut(s) 2765, 2768, 2771, 2780, 2891
Tsp45I GTSAC 4 cut(s) 54, 1065, 1744, 1889
TspGWI ACGGA 5 cut(s) 75, 373, 1118, 3019, 3472
TspRI CASTG 7 cut(s) 888, 962, 1360, 2670, 3267, 3305, 3533
Tth111I GACNNNGTC 1 cut(s) 3458
Van91I CCANNNNNTGG 3 cut(s) 1154, 1430, 3395
VpaK11BI GGWCC 7 cut(s) 85, 798, 960, 1105, 1790, 2872, 3406
VspI ATTAAT 1 cut(s) 1821
XagI CCTNNNNNAGG 1 cut(s) 2274
XapI RAATTY 9 cut(s) 64, 499, 1081, 1698, 1733, 1996, 2299, 2362, 3383
XbaI TCTAGA 1 cut(s) 352
XceI RCATGY 4 cut(s) 2102, 2462, 2932, 2969
XcmI CCANNNNNNNNNTGG 4 cut(s) 172, 548, 683, 808
XhoI CTCGAG 1 cut(s) 326
XmnI GAANNNNTTC 3 cut(s) 219, 2366, 2717
XspI CTAG 7 cut(s) 341, 353, 431, 1233, 1511, 1956, 3582
ZraI GACGTC 1 cut(s) 72
ZrmI AGTACT 1 cut(s) 591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.