Rmu_sc0035228.1_g000001

Lethal(2) giant larvae protein homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035228.1
Physical Location & Seq
Reverse (-)
1 .. 3483
3483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0035228.1_g000001.1.cds

Sequence Viewer

Length: 1887 bp
ctgcaagtgaaggaagaaacggtccataattcttttgaaggcacaagaactgagctgactgatgctacatcagacagcaaacaggtggagaaagagataagctctctttgttggatatgcgatgatgggtcaagtcttgctgttggctatgtagatggtgatataatgttttgggatatatcaactgctgagtctaccaaggatcatagatctaaaaagttagctaacaatgttgcgaagctagagttatcattagatgacaagagactccctgtcatagttttacagtggtctgcaaataggttaagtcatcatcctaggggccaactctttgtttatggaggtgaaggaattgggtctgaagaagttctcacggttctgagcgtggattggtcttcaggaatagaaagtctgaaatgcataggtcgtgtggaccttacacttgttggttcatttgcagatatgattttacttccagctgctggtgcaatggagaacggtgacacattgctattcactttgacaaatcagggacaactgcatgtctatgacaaggcttgctggtctgccttaatgtctcaccaaaagaaaaggactgatgggactgcagtgcagtatcctatgtttatacctactactgaaccatgtatgacagtggcaaagcttgctttggtggatagagatgggaaatactcctcagctttgtccaaggaagtttcagttgacaagtctaatgcgaaacacactttgaagaaggggggtgcaaagtggcctttgactggtggtgtccccagccaactttctgatgctgaaaattttcatgtcgagagactatatgtagcaggatatcaagatggatctgttcgaatatgggatgccacctatccaactccgtcgcttatatatgctataggtcctgaggttgtttatacttcacaacaaggtaatgggcctcggtgcacagctgtgttttctattcttgattctcctatatccatactacaatatgcaaattttggagcaagacttactgtgggatatgaatgtggccgggttgcaatgcttgatattagtacatcgtcagttttgtttcttacagacagtgtctccaactcaagttccccagtcatctgtctgtctgtgaaatcattatcagatactaatagcttatcacagagcccaaagggctctgaatccaagaattcgactgatcctcaaaatggaatgaatccaaaggattctgaatccaaaacttcaagtgtttctggaaatgggttggcaatcccaaaggactctgaatccaagaatgtggctgaccctgaacatggaatgagtgaaaaagatcctgaatccaagactttgattgcctctggaaatgggttggcaatcccagaggactctgaatccaagaatgtggctgatcctgaacctggaatgagtgtaaaagatcctgaatcccagacattgagttattctggaaatgagttggcaatcccaaaagactctgaatccaagaatgagactgaacctgaacatggaaagagtttaaaagatcctgaatccaagactttgagtgattctgaaaatgggttggcgttcattatgaccagaaatgcacattttgttattttagatagtgccactggcaatatgatcaggtcttggcccatgcatccaaaaatggattctactgcgatttcgatgtacattatagaggatggtgatgttttatttgatttgtcgagtgcaaaaaaggattctttagacttgcctcagaaaggcatagctaaacatgatgacataccacctaatgctgactctggagggacacagcttgtggttgaccaggatacctccaccaaaactgcatattttttgcagagatcg

Protein Analysis

629

Amino Acids

67.89

Weight (kDa)

4.89

Isoelectric Point (pI)

41.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 482
AccI GTMKAC 1 cut(s) 194
AclWI GGATC 7 cut(s) 210, 865, 1205, 1337, 1415, 1442, 1547
AcoI YGGCCR 1 cut(s) 1048
AcsI RAATTY 3 cut(s) 814, 1012, 1201
AcuI CTGAAG 2 cut(s) 381, 381
AfaI GTAC 2 cut(s) 1075, 1706
AfiI CCNNNNNNNGG 7 cut(s) 482, 779, 1220, 1325, 1430, 1535, 1778
AgsI TTSAA 3 cut(s) 38, 751, 1257
AhdI GACNNNNNGTC 1 cut(s) 272
AjnI CCWGG 2 cut(s) 1429, 1845
AjuI GAANNNNNNNTTGG 2 cut(s) 1669, 1701
AleI CACNNNNGTG 1 cut(s) 965
Alw21I GWGCWC 1 cut(s) 962
Alw26I GTCTC 5 cut(s) 259, 582, 823, 1111, 1514
Alw44I GTGCAC 1 cut(s) 958
AlwI GGATC 7 cut(s) 210, 865, 1205, 1337, 1415, 1442, 1547
AlwNI CAGNNNCTG 1 cut(s) 482
AoxI GGCC 5 cut(s) 322, 770, 950, 1048, 1664
ApaLI GTGCAC 1 cut(s) 958
ApeKI GCWGC 1 cut(s) 479
ApoI RAATTY 3 cut(s) 814, 1012, 1201
Asp700I GAANNNNTTC 2 cut(s) 366, 816
AspA2I CCTAGG 1 cut(s) 317
AspS9I GGNCC 6 cut(s) 22, 322, 433, 914, 950, 1665
AsuC2I CCSGG 1 cut(s) 1052
AsuHPI GGTGA 5 cut(s) 170, 356, 512, 572, 1733
AsuII TTCGAA 1 cut(s) 865
AvaII GGWCC 3 cut(s) 22, 433, 914
AvrII CCTAGG 1 cut(s) 317
AxyI CCTNAGG 1 cut(s) 918
BaeGI GKGCMC 1 cut(s) 962
BanII GRGCYC 2 cut(s) 1181, 1190
BbsI GAAGAC 1 cut(s) 387
Bbv12I GWGCWC 1 cut(s) 962
BbvCI CCTCAGC 1 cut(s) 697
BbvI GCAGC 1 cut(s) 466
BccI CCATC 6 cut(s) 119, 149, 593, 677, 848, 1712
BciT130I CCWGG 2 cut(s) 1431, 1847
BciVI GTATCC 2 cut(s) 627, 1843
BclI TGATCA 1 cut(s) 1653
BcnI CCSGG 1 cut(s) 1052
BcoDI GTCTC 5 cut(s) 259, 582, 823, 1111, 1514
BfaI CTAG 2 cut(s) 242, 318
BfmI CTRYAG 2 cut(s) 606, 909
BfuI GTATCC 2 cut(s) 627, 1843
BglI GCCNNNNNGGC 1 cut(s) 1185
BglII AGATCT 1 cut(s) 209
BisI GCNGC 1 cut(s) 480
BlnI CCTAGG 1 cut(s) 317
BlsI GCNGC 1 cut(s) 481
Bme1390I CCNGG 3 cut(s) 1052, 1431, 1847
Bme18I GGWCC 3 cut(s) 22, 433, 914
BmeRI GACNNNNNGTC 1 cut(s) 272
BmgT120I GGNCC 6 cut(s) 22, 322, 433, 914, 950, 1665
BmiI GGNNCC 1 cut(s) 323
BmrFI CCNGG 3 cut(s) 1052, 1431, 1847
BmrI ACTGGG 1 cut(s) 1118
BmsI GCATC 4 cut(s) 52, 796, 865, 1681
BmuI ACTGGG 1 cut(s) 1118
BpiI GAAGAC 1 cut(s) 387
BplI GAGNNNNNCTC 2 cut(s) 86, 118
BpmI CTGGAG 1 cut(s) 1842
Bpu10I CCTNAGC 1 cut(s) 697
Bpu14I TTCGAA 1 cut(s) 865
BpuEI CTTGAG 1 cut(s) 1099
BpuMI CCSGG 1 cut(s) 1052
BsaJI CCNNGG 4 cut(s) 198, 317, 708, 953
BsaXI ACNNNNNCTCC 2 cut(s) 1091, 1121
Bsc4I CCNNNNNNNGG 7 cut(s) 482, 779, 1220, 1325, 1430, 1535, 1778
Bse1I ACTGG 3 cut(s) 784, 1124, 1648
Bse21I CCTNAGG 1 cut(s) 918
Bse3DI GCAATG 3 cut(s) 495, 506, 1065
BseBI CCWGG 2 cut(s) 1431, 1847
BseDI CCNNGG 4 cut(s) 198, 317, 708, 953
BseGI GGATG 4 cut(s) 313, 880, 1672, 1723
BseLI CCNNNNNNNGG 7 cut(s) 482, 779, 1220, 1325, 1430, 1535, 1778
BseMI GCAATG 3 cut(s) 495, 506, 1065
BseMII CTCAG 6 cut(s) 42, 180, 371, 711, 909, 1787
BseNI ACTGG 3 cut(s) 784, 1124, 1648
BseRI GAGGAG 1 cut(s) 685
BseSI GKGCMC 1 cut(s) 962
BseXI GCAGC 1 cut(s) 466
BseYI CCCAGC 1 cut(s) 791
BsgI GTGCAG 1 cut(s) 632
BshFI GGCC 5 cut(s) 324, 772, 952, 1050, 1666
BsiHKAI GWGCWC 1 cut(s) 962
BsiSI CCGG 1 cut(s) 1051
BslFI GGGAC 4 cut(s) 546, 616, 773, 1840
BslI CCNNNNNNNGG 7 cut(s) 482, 779, 1220, 1325, 1430, 1535, 1778
BsmAI GTCTC 5 cut(s) 259, 582, 823, 1111, 1514
BsmFI GGGAC 4 cut(s) 546, 616, 773, 1840
BsnI GGCC 5 cut(s) 324, 772, 952, 1050, 1666
Bsp119I TTCGAA 1 cut(s) 865
Bsp1286I GDGCHC 3 cut(s) 962, 1181, 1190
Bsp1407I TGTACA 1 cut(s) 1704
BspANI GGCC 5 cut(s) 324, 772, 952, 1050, 1666
BspCNI CTCAG 6 cut(s) 43, 181, 372, 710, 910, 1786
BspLI GGNNCC 1 cut(s) 323
BspMAI CTGCAG 1 cut(s) 610
BspPI GGATC 7 cut(s) 210, 865, 1205, 1337, 1415, 1442, 1547
BspT104I TTCGAA 1 cut(s) 865
BsrDI GCAATG 3 cut(s) 495, 506, 1065
BsrGI TGTACA 1 cut(s) 1704
BsrI ACTGG 3 cut(s) 784, 1124, 1648
BssECI CCNNGG 4 cut(s) 198, 317, 708, 953
BssT1I CCWWGG 3 cut(s) 198, 317, 708
Bst2UI CCWGG 2 cut(s) 1431, 1847
Bst4CI ACNGT 7 cut(s) 22, 288, 376, 500, 655, 1033, 1103
BstAPI GCANNNNNTGC 1 cut(s) 665
BstAUI TGTACA 1 cut(s) 1704
BstBI TTCGAA 1 cut(s) 865
BstC8I GCNNGC 2 cut(s) 559, 666
BstDEI CTNAG 6 cut(s) 51, 189, 380, 697, 918, 1773
BstENI CCTNNNNNAGG 1 cut(s) 1776
BstF5I GGATG 4 cut(s) 313, 880, 1672, 1723
BstMAI GTCTC 5 cut(s) 259, 582, 823, 1111, 1514
BstMWI GCNNNNNNNGC 3 cut(s) 485, 665, 1185
BstNI CCWGG 2 cut(s) 1431, 1847
BstNSI RCATGY 1 cut(s) 545
BstSCI CCNGG 3 cut(s) 1050, 1429, 1845
BstSFI CTRYAG 2 cut(s) 606, 909
BstSLI GKGCMC 1 cut(s) 962
BstV1I GCAGC 1 cut(s) 466
BstV2I GAAGAC 1 cut(s) 387
BstX2I RGATCY 5 cut(s) 209, 857, 1342, 1447, 1552
BstXI CCANNNNNNTGG 2 cut(s) 1309, 1414
BstYI RGATCY 5 cut(s) 209, 857, 1342, 1447, 1552
Bsu36I CCTNAGG 1 cut(s) 918
BsuI GTATCC 2 cut(s) 627, 1843
BsuRI GGCC 5 cut(s) 324, 772, 952, 1050, 1666
BtgZI GCGATG 1 cut(s) 135
BtsCI GGATG 4 cut(s) 313, 880, 1672, 1723
BtsI GCAGTG 1 cut(s) 615
BtsIMutI CAGTG 5 cut(s) 293, 615, 660, 1108, 1641
Cac8I GCNNGC 2 cut(s) 559, 666
CaiI CAGNNNCTG 1 cut(s) 482
Cfr13I GGNCC 6 cut(s) 22, 322, 433, 914, 950, 1665
Csp6I GTAC 2 cut(s) 1074, 1705
CviAII CATG 7 cut(s) 542, 645, 821, 1325, 1535, 1669, 1793
CviQI GTAC 2 cut(s) 1074, 1705
DdeI CTNAG 6 cut(s) 51, 189, 380, 697, 918, 1773
DraI TTTAAA 1 cut(s) 1548
DriI GACNNNNNGTC 1 cut(s) 272
EaeI YGGCCR 1 cut(s) 1048
Eam1105I GACNNNNNGTC 1 cut(s) 272
Eco130I CCWWGG 3 cut(s) 198, 317, 708
Eco24I GRGCYC 2 cut(s) 1181, 1190
Eco32I GATATC 1 cut(s) 848
Eco47I GGWCC 3 cut(s) 22, 433, 914
Eco57I CTGAAG 2 cut(s) 381, 381
Eco81I CCTNAGG 1 cut(s) 918
EcoNI CCTNNNNNAGG 1 cut(s) 1776
EcoO109I RGGNCCY 1 cut(s) 914
EcoRI GAATTC 1 cut(s) 1201
EcoRII CCWGG 2 cut(s) 1429, 1845
EcoRV GATATC 1 cut(s) 848
EcoT14I CCWWGG 3 cut(s) 198, 317, 708
EcoT22I ATGCAT 2 cut(s) 422, 1674
EcoT38I GRGCYC 2 cut(s) 1181, 1190
ErhI CCWWGG 3 cut(s) 198, 317, 708
FaeI CATG 7 cut(s) 545, 648, 824, 1328, 1538, 1672, 1796
FaqI GGGAC 4 cut(s) 546, 616, 773, 1840
FatI CATG 7 cut(s) 541, 644, 820, 1324, 1534, 1668, 1792
FbaI TGATCA 1 cut(s) 1653
FblI GTMKAC 1 cut(s) 194
Fnu4HI GCNGC 1 cut(s) 480
FokI GGATG 4 cut(s) 300, 887, 1659, 1730
FriOI GRGCYC 2 cut(s) 1181, 1190
Fsp4HI GCNGC 1 cut(s) 480
FspBI CTAG 2 cut(s) 242, 318
GluI GCNGC 1 cut(s) 480
GsaI CCCAGC 1 cut(s) 795
GsuI CTGGAG 1 cut(s) 1842
HaeIII GGCC 5 cut(s) 324, 772, 952, 1050, 1666
HapII CCGG 1 cut(s) 1051
Hin1II CATG 7 cut(s) 545, 648, 824, 1328, 1538, 1672, 1796
HincII GTYRAC 2 cut(s) 724, 1843
HindII GTYRAC 2 cut(s) 724, 1843
HindIII AAGCTT 1 cut(s) 662
HpaII CCGG 1 cut(s) 1051
HphI GGTGA 5 cut(s) 170, 356, 512, 572, 1733
Hpy166II GTNNAC 5 cut(s) 195, 433, 724, 960, 1843
Hpy8I GTNNAC 5 cut(s) 195, 433, 724, 960, 1843
Hpy99I CGWCG 1 cut(s) 898
HpyAV CCTTC 4 cut(s) 4, 32, 341, 748
HpyCH4III ACNGT 7 cut(s) 22, 288, 376, 500, 655, 1033, 1103
HpyF10VI GCNNNNNNNGC 3 cut(s) 485, 665, 1185
HpyF3I CTNAG 6 cut(s) 51, 189, 380, 697, 918, 1773
Hsp92II CATG 7 cut(s) 545, 648, 824, 1328, 1538, 1672, 1796
Ksp22I TGATCA 1 cut(s) 1653
LmnI GCTCC 1 cut(s) 1019
Lsp1109I GCAGC 1 cut(s) 466
LweI GCATC 4 cut(s) 52, 796, 865, 1681
MaeI CTAG 2 cut(s) 242, 318
MaeIII GTNAC 1 cut(s) 500
MboII GAAGA 4 cut(s) 26, 374, 387, 763
MflI RGATCY 5 cut(s) 209, 857, 1342, 1447, 1552
MhlI GDGCHC 3 cut(s) 962, 1181, 1190
MluCI AATT 5 cut(s) 28, 351, 814, 1012, 1201
MlyI GAGTC 6 cut(s) 200, 261, 1286, 1391, 1496, 1811
MmeI TCCRAC 3 cut(s) 92, 911, 1134
Mph1103I ATGCAT 2 cut(s) 422, 1674
MroXI GAANNNNTTC 2 cut(s) 366, 816
MseI TTAA 3 cut(s) 305, 572, 1547
MslI CAYNNNNRTG 2 cut(s) 546, 965
MspA1I CMGCKG 2 cut(s) 479, 965
MspI CCGG 1 cut(s) 1051
MspR9I CCNGG 3 cut(s) 1052, 1431, 1847
MvaI CCWGG 2 cut(s) 1431, 1847
MwoI GCNNNNNNNGC 3 cut(s) 485, 665, 1185
NciI CCSGG 1 cut(s) 1052
NlaIII CATG 7 cut(s) 545, 648, 824, 1328, 1538, 1672, 1796
NlaIV GGNNCC 1 cut(s) 323
NmuCI GTSAC 1 cut(s) 500
NsiI ATGCAT 2 cut(s) 422, 1674
NspI RCATGY 1 cut(s) 545
NspV TTCGAA 1 cut(s) 865
OliI CACNNNNGTG 1 cut(s) 965
PdmI GAANNNNTTC 2 cut(s) 366, 816
PflFI GACNNNGTC 1 cut(s) 1103
PflMI CCANNNNNTGG 1 cut(s) 482
PkrI GCNGC 1 cut(s) 481
PleI GAGTC 6 cut(s) 199, 261, 1286, 1391, 1496, 1811
PpsI GAGTC 6 cut(s) 199, 261, 1286, 1391, 1496, 1811
PpuMI RGGWCCY 1 cut(s) 914
Psp5II RGGWCCY 1 cut(s) 914
Psp6I CCWGG 2 cut(s) 1429, 1845
PspFI CCCAGC 1 cut(s) 791
PspGI CCWGG 2 cut(s) 1429, 1845
PspN4I GGNNCC 1 cut(s) 323
PspPI GGNCC 6 cut(s) 22, 322, 433, 914, 950, 1665
PspPPI RGGWCCY 1 cut(s) 914
PstI CTGCAG 1 cut(s) 610
PstNI CAGNNNCTG 1 cut(s) 482
PsuI RGATCY 5 cut(s) 209, 857, 1342, 1447, 1552
PsyI GACNNNGTC 1 cut(s) 1103
PvuII CAGCTG 2 cut(s) 479, 965
RsaI GTAC 2 cut(s) 1075, 1706
RsaNI GTAC 2 cut(s) 1074, 1705
RseI CAYNNNNRTG 2 cut(s) 546, 965
SaqAI TTAA 3 cut(s) 305, 572, 1547
SatI GCNGC 1 cut(s) 480
Sau96I GGNCC 6 cut(s) 22, 322, 433, 914, 950, 1665
SchI GAGTC 6 cut(s) 200, 261, 1286, 1391, 1496, 1811
ScrFI CCNGG 3 cut(s) 1052, 1431, 1847
SduI GDGCHC 3 cut(s) 962, 1181, 1190
SfaNI GCATC 4 cut(s) 52, 796, 865, 1681
SfcI CTRYAG 2 cut(s) 606, 909
SfuI TTCGAA 1 cut(s) 865
SinI GGWCC 3 cut(s) 22, 433, 914
SmiMI CAYNNNNRTG 2 cut(s) 546, 965
SmlI CTYRAG 1 cut(s) 1114
SmoI CTYRAG 1 cut(s) 1114
Sse9I AATT 5 cut(s) 28, 351, 814, 1012, 1201
SspMI CTAG 2 cut(s) 242, 318
StyD4I CCNGG 3 cut(s) 1050, 1429, 1845
StyI CCWWGG 3 cut(s) 198, 317, 708
TaaI ACNGT 7 cut(s) 22, 288, 376, 500, 655, 1033, 1103
TaqI TCGA 5 cut(s) 825, 865, 1205, 1700, 1742
TasI AATT 5 cut(s) 28, 351, 814, 1012, 1201
TatI WGTACW 2 cut(s) 1073, 1704
Tru1I TTAA 3 cut(s) 305, 572, 1547
Tru9I TTAA 3 cut(s) 305, 572, 1547
TscAI CASTG 5 cut(s) 293, 615, 660, 1108, 1648
TseFI GTSAC 1 cut(s) 500
TseI GCWGC 1 cut(s) 479
Tsp45I GTSAC 1 cut(s) 500
TspDTI ATGAA 5 cut(s) 441, 809, 1056, 1241, 1588
TspGWI ACGGA 1 cut(s) 882
TspRI CASTG 5 cut(s) 293, 615, 660, 1108, 1648
Tth111I GACNNNGTC 1 cut(s) 1103
Van91I CCANNNNNTGG 1 cut(s) 482
VneI GTGCAC 1 cut(s) 958
VpaK11BI GGWCC 3 cut(s) 22, 433, 914
XagI CCTNNNNNAGG 1 cut(s) 1776
XapI RAATTY 3 cut(s) 814, 1012, 1201
XceI RCATGY 1 cut(s) 545
XmaJI CCTAGG 1 cut(s) 317
XmiI GTMKAC 1 cut(s) 194
XmnI GAANNNNTTC 2 cut(s) 366, 816
XspI CTAG 2 cut(s) 242, 318
Zsp2I ATGCAT 2 cut(s) 422, 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.