Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002481

Physical Location & Seq

Genomic Coordinates Forward (+)

21832327 .. 21834579

Gene Structure 2253 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1210200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGAAGGCCATGCCCCTACCCTTTGAGGAGTTTCAAGGGAAGGGGGTGCTAGATTTCTCTTCTGTTTCTTCTTCTTCTGCCGCTGCTGCTTCAGATTCATTTCTTTCACCGCCGCCACCGCCCCCGCAAAAGTGGATTCACCGCCACCACAGCAGCAAAGAGAATTGCTATGTGGGCAGTACTGAGCCCACCTCTGTTCTCGACACCAGAAGAAGCCCAAGCCCGTCCACATCCTCCTCAACACTGTCTTCCTCCCACGGCAGCGGAGCCAGCGGTGGCTCGACAGACACAACCACTGCGGCGGGGGTCGAAAACCCATCTCAAACACCCTTAGAGGAACAAAAATGTGGGCCGCCGCTTGGCATGGAGGACTGGGAGAGCGTTCTGTCTGAGTCCCCCGGTCAAGACCAGTCCATCCTGAGGTTGATTATGAGTGACATCGAAGACCCGTCTTTCGGATTGAACACGCTGCTGCAGAGTTCAAGCGGCTCACATCATCACCACCAAAATTTGGAATTCGGCGTCGGAGGGTTTCAGGATGTGGTGGATCAAGGTGGAGGATACGGCGGCGGATTCGAACTCGATAATCATTCTGGGAGTTTGGTTAGCCCCTCTCTGCATGCAAGTTTTGGTCCTGATTTTAGTTTCAGTAATAATGCCTCAAATGTTGAGGCCCAGAGCAGCAATGGGAGACCAAACCCTGCAATGTTCTCTGCTTCAATGAGTAATCCTTTTCCGGTTTCGCTATCTTCCGGCATGTTTCAGCAGCAACAGAACATGGGTTTGGATGAGAAGCCTCAGATTTTGACTCCCCAGATGGTAATTAACCAAAACCAAACTCAGTTTACACAGAACTCAGCTATGTTTATGCCTTTGACAGATGCCCAATTGCAAGAGCACCACCTTCTCTCACCGCCTCCGTCGAAAAGGCTCAATTCTGGTGGATTTGGACCCGGTTACCTGGTCCAAAGGGTACCGTTTTTGAATCCCGGGCAAGAGCTATTGGTTCGGGCTCAGCAGCAGCAGCAGCAGCTTCAGTTTCTTCCTCAGGACCTTCAGCGGCAGAGGCCAACAATGCCGATGGCAAAGGAGAAAATGATGAGCCTGGCAGAGGGCGGTAAAGAAATGATGAACCAGAACCAGCGGCAGCAGCAGCTTCAGCAAGCAGTAATTGACCAGCTTTTCAATGCAGCAGAGCTGATCGAAACAGGAAACCCGGTACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTCCCATTGGTAAGCCTTTTTCAAGGGCTGCTTTTTACTTCAAGGAGGCCTTGCAATTGCTCCTTCACATCAACACCTCTAGTAACTCCTCCTCGGCTTTGTCGCCTTTTAGCCTCATTTTCAAGATTGGTGCTTATAAATCGTTCACTGAAATCTCGCCTGTTGTCCAATTTGCCAACTTCACTTGTAACCAAGCCATCCTTGAAGCCGTGGAGGGCTTTAAACGTGTTCATGTTATTGATTTTGATATTGGCTATGGCGGGCAATGGGCTTCTTTCATGCAAGAAGTTGCCTTGAGAAATGGGGGTGCATCTTCTCTTAAAATGACTGCATTTATATCGTCTTCCGCGCATGATGAATTTGAGGTTAGTTTCACTCGAGAAAACCTCAAACACTTTGCTAGTGAGCTCAACTTGGCATTCGAACTTGAACTTGTGAGCCTTGAGTCGTTGAACTCTGGTTCGTGGGGATTACCTCTTCATGCTTCTGACGGCGTGGCAGTTGCTGTCAATCTCCCGATTGGCTCCTTTTTGAGTAACCCTTTATTGCTTCCATTGATCTTGCGCTTTGTTAAGCAGCTTTCTCCCACAATTGTGGTCTCTTTGGACAGAGGCAGTGACCGGACCGATGTTCCATTTCCTCACCAAATAATCCAAGCCCTCCACTCTTATTCCGGCCTGCTTGAATCAATAGATGCTGTCAATATAAACCCAGATGCACTGCAGAAGATTGAGAGGTACTTGCTCCAACCAGGCATTGAAAAGATTGTAACGGGTCGCCATCATTCCCCTAAAAGAACACCTTCGTGGAGGACACTGTTTTTGTCATCTGGGTTCTCACCATTGACATTCAGCAATTTCACCGAGTCCCAGGCCGAGTGCTTGGTGCAGCGGACTCCGGTTGGGGGGTTCCACGTCGAGAAGAAACAGTCTTCGCTTGTTCTCTGCTGGCAGCGCAAGGATCTCATATCTGCCTCGGCTTGGAGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007623 GO:0008150 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048511 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071840 GO:0080090 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

751

Amino Acids

81.78

Weight (kDa)

5.8

Isoelectric Point (pI)

58.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	392 - 749	1.6e-90	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00150
fragaria_vesca	FvH4_5g00020 FvH4_5g00020 FvH4_7g11120
malus_domestica	MD00G1043300.v1.1 MD02G1210200.v1.1 MD04G1088100.v1.1 MD07G1115800.v1.1
prunus_persica	Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.5G072300_v2.0.a1 Prupe.5G072300_v2.0.a1
pyrus_communis	pycom02g17200 pycom06g05130 pycom07g10860
rosa_chinensis	RchiOBHm_Chr1g0349141 RchiOBHm_Chr7g0202931
rosa_laevigata	RLG00000003564 RLG00000028602
rosa_multiflora	Rmu_co8366677.1_g000001 Rmu_co8449587.1_g000001 Rmu_sc0008159.1_g000016 Rmu_ssc0000150.1_g000020
rosa_roxburghii	Rroxscaffold_3G00254180 Rroxscaffold_4G00306070
rosa_rugosa	Rorug01G0200700 Rorug07G0074000
rosa_samantha	Rh1AG218400 Rh1BG183800 Rh1CG202900 Rh1DG213600 Rh7AG201800 Rh7BG202000 Rh7CG213100 Rh7DG208800
rosa_wichuraiana	Rw1G018550 Rw7G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1398
Acc65I	GGTACC	1 cut(s)	973
AccB1I	GGYRCC	1 cut(s)	973
AccB7I	CCANNNNNTGG	1 cut(s)	511
AccII	CGCG	3 cut(s)	1226, 1243, 1610
AclWI	GGATC	2 cut(s)	555, 2229
AcsI	RAATTY	3 cut(s)	508, 515, 1619
AcuI	CTGAAG	4 cut(s)	75, 1019, 1040, 1142
AcyI	GRCGYC	1 cut(s)	522
AfaI	GTAC	4 cut(s)	181, 975, 1221, 2000
AfiI	CCNNNNNNNGG	7 cut(s)	359, 420, 455, 511, 1111, 2165, 2241
AflIII	ACRYGT	1 cut(s)	1486
AjiI	CACGTC	1 cut(s)	2176
AjnI	CCWGG	4 cut(s)	960, 1104, 2011, 2130
AjuI	GAANNNNNNNTTGG	2 cut(s)	767, 799
AleI	CACNNNNGTG	2 cut(s)	1853, 2065
AluBI	AGCT	9 cut(s)	860, 1000, 1033, 1156, 1180, 1198, 1258, 1669, 1840
AluI	AGCT	9 cut(s)	860, 1000, 1033, 1156, 1180, 1198, 1258, 1669, 1840
Alw21I	GWGCWC	2 cut(s)	900, 1671
Alw26I	GTCTC	2 cut(s)	685, 1864
AlwI	GGATC	2 cut(s)	555, 2229
AlwNI	CAGNNNCTG	1 cut(s)	1766
Ama87I	CYCGRG	2 cut(s)	989, 1638
AoxI	GGCC	7 cut(s)	6, 350, 672, 1067, 1308, 1936, 2133
ApoI	RAATTY	3 cut(s)	508, 515, 1619
ArsI	GACNNNNNNTTYG	4 cut(s)	437, 469, 2065, 2097
Asp700I	GAANNNNTTC	1 cut(s)	2062
Asp718I	GGTACC	1 cut(s)	973
AspLEI	GCGC	5 cut(s)	1228, 1243, 1612, 1827, 2217
AspS9I	GGNCC	7 cut(s)	350, 632, 673, 950, 964, 1051, 1884
AsuC2I	CCSGG	5 cut(s)	399, 954, 990, 991, 1217
AsuHPI	GGTGA	8 cut(s)	99, 131, 491, 903, 1244, 1895, 2091, 2113
AsuII	TTCGAA	2 cut(s)	576, 1683
AvaI	CYCGRG	2 cut(s)	989, 1638
AvaII	GGWCC	5 cut(s)	632, 950, 964, 1051, 1884
AxyI	CCTNAGG	2 cut(s)	419, 1047
BanI	GGYRCC	1 cut(s)	973
BanII	GRGCYC	3 cut(s)	189, 1015, 1671
BbsI	GAAGAC	4 cut(s)	240, 450, 1596, 2184
Bbv12I	GWGCWC	2 cut(s)	900, 1671
BccI	CCATC	6 cut(s)	325, 422, 811, 1075, 1466, 2049
BceAI	ACGGC	4 cut(s)	274, 580, 1454, 1768
BcgI	CGANNNNNNTGC	2 cut(s)	1581, 1615
BciT130I	CCWGG	4 cut(s)	962, 1106, 2013, 2132
BciVI	GTATCC	1 cut(s)	554
BcnI	CCSGG	5 cut(s)	399, 954, 990, 991, 1217
BcoDI	GTCTC	2 cut(s)	685, 1864
BfaI	CTAG	3 cut(s)	50, 1341, 1662
BfmI	CTRYAG	2 cut(s)	473, 1982
BfuI	GTATCC	1 cut(s)	554
BlpI	GCTNAGC	1 cut(s)	1014
BmcAI	AGTACT	1 cut(s)	181
Bme1390I	CCNGG	9 cut(s)	399, 954, 962, 990, 991, 1106, 1217, 2013, 2132
Bme18I	GGWCC	5 cut(s)	632, 950, 964, 1051, 1884
BmeT110I	CYCGRG	2 cut(s)	989, 1638
BmgBI	CACGTC	1 cut(s)	2176
BmgT120I	GGNCC	7 cut(s)	350, 632, 673, 950, 964, 1051, 1884
BmiI	GGNNCC	5 cut(s)	268, 952, 975, 1786, 2171
BmrFI	CCNGG	9 cut(s)	399, 954, 962, 990, 991, 1106, 1217, 2013, 2132
BmrI	ACTGGG	1 cut(s)	382
BmsI	GCATC	4 cut(s)	871, 1580, 1945, 1966
BmuI	ACTGGG	1 cut(s)	382
BpiI	GAAGAC	4 cut(s)	240, 450, 1596, 2184
BplI	GAGNNNNNCTC	4 cut(s)	176, 208, 1632, 1664
Bpu1102I	GCTNAGC	1 cut(s)	1014
Bpu14I	TTCGAA	2 cut(s)	576, 1683
BpuEI	CTTGAG	2 cut(s)	1576, 1724
BpuMI	CCSGG	5 cut(s)	399, 954, 990, 991, 1217
BsaHI	GRCGYC	1 cut(s)	522
BsaI	GGTCTC	2 cut(s)	685, 1864
BsaJI	CCNNGG	7 cut(s)	256, 397, 989, 1353, 1470, 2130, 2235
BsaWI	WCCGGW	3 cut(s)	736, 1881, 2158
Bsc4I	CCNNNNNNNGG	7 cut(s)	359, 420, 455, 511, 1111, 2165, 2241
Bse1I	ACTGG	2 cut(s)	377, 409
Bse21I	CCTNAGG	2 cut(s)	419, 1047
Bse3DI	GCAATG	3 cut(s)	691, 711, 1532
BseBI	CCWGG	4 cut(s)	962, 1106, 2013, 2132
BseDI	CCNNGG	7 cut(s)	256, 397, 989, 1353, 1470, 2130, 2235
BseGI	GGATG	5 cut(s)	230, 414, 544, 793, 1458
BseLI	CCNNNNNNNGG	7 cut(s)	359, 420, 455, 511, 1111, 2165, 2241
BseMI	GCAATG	3 cut(s)	691, 711, 1532
BseMII	CTCAG	8 cut(s)	174, 381, 410, 812, 854, 870, 1028, 1061
BseNI	ACTGG	2 cut(s)	377, 409
BseRI	GAGGAG	4 cut(s)	41, 226, 1339, 1342
BsgI	GTGCAG	1 cut(s)	2168
Bsh1236I	CGCG	3 cut(s)	1226, 1243, 1610
BshFI	GGCC	7 cut(s)	8, 352, 674, 1069, 1310, 1938, 2135
BshNI	GGYRCC	1 cut(s)	973
BsiHKAI	GWGCWC	2 cut(s)	900, 1671
BsiHKCI	CYCGRG	2 cut(s)	989, 1638
BsiSI	CCGG	9 cut(s)	399, 737, 753, 954, 990, 1217, 1882, 1935, 2159
BslFI	GGGAC	2 cut(s)	379, 2113
BslI	CCNNNNNNNGG	7 cut(s)	359, 420, 455, 511, 1111, 2165, 2241
BsmAI	GTCTC	2 cut(s)	685, 1864
BsmFI	GGGAC	2 cut(s)	379, 2113
BsmI	GAATGC	1 cut(s)	1679
BsnI	GGCC	7 cut(s)	8, 352, 674, 1069, 1310, 1938, 2135
Bso31I	GGTCTC	2 cut(s)	685, 1864
BsoBI	CYCGRG	2 cut(s)	989, 1638
Bsp119I	TTCGAA	2 cut(s)	576, 1683
Bsp1286I	GDGCHC	4 cut(s)	189, 900, 1015, 1671
Bsp143I	GATC	4 cut(s)	547, 1200, 1818, 2221
Bsp1720I	GCTNAGC	1 cut(s)	1014
BspANI	GGCC	7 cut(s)	8, 352, 674, 1069, 1310, 1938, 2135
BspCNI	CTCAG	8 cut(s)	175, 382, 411, 811, 853, 869, 1027, 1060
BspFNI	CGCG	3 cut(s)	1226, 1243, 1610
BspLI	GGNNCC	5 cut(s)	268, 952, 975, 1786, 2171
BspMAI	CTGCAG	2 cut(s)	477, 1986
BspPI	GGATC	2 cut(s)	555, 2229
BspT104I	TTCGAA	2 cut(s)	576, 1683
BspT107I	GGYRCC	1 cut(s)	973
BspTNI	GGTCTC	2 cut(s)	685, 1864
BsrDI	GCAATG	3 cut(s)	691, 711, 1532
BsrI	ACTGG	2 cut(s)	377, 409
BssECI	CCNNGG	7 cut(s)	256, 397, 989, 1353, 1470, 2130, 2235
BssMI	GATC	4 cut(s)	547, 1200, 1818, 2221
BssNI	GRCGYC	1 cut(s)	522
Bst2UI	CCWGG	4 cut(s)	962, 1106, 2013, 2132
Bst4CI	ACNGT	4 cut(s)	246, 978, 2079, 2190
Bst6I	CTCTTC	2 cut(s)	64, 1743
BstACI	GRCGYC	1 cut(s)	522
BstBI	TTCGAA	2 cut(s)	576, 1683
BstC8I	GCNNGC	6 cut(s)	271, 621, 1164, 1523, 1940, 2210
BstDEI	CTNAG	9 cut(s)	183, 331, 390, 419, 798, 840, 856, 1014, 1047
BstDSI	CCRYGG	2 cut(s)	256, 1470
BstEII	GGTNACC	1 cut(s)	956
BstENI	CCTNNNNNAGG	1 cut(s)	1109
BstF5I	GGATG	5 cut(s)	230, 414, 544, 793, 1458
BstFNI	CGCG	3 cut(s)	1226, 1243, 1610
BstHHI	GCGC	5 cut(s)	1228, 1243, 1612, 1827, 2217
BstKTI	GATC	4 cut(s)	550, 1203, 1821, 2224
BstMAI	GTCTC	2 cut(s)	685, 1864
BstMBI	GATC	4 cut(s)	547, 1200, 1818, 2221
BstNI	CCWGG	4 cut(s)	962, 1106, 2013, 2132
BstNSI	RCATGY	2 cut(s)	623, 760
BstPI	GGTNACC	1 cut(s)	956
BstSCI	CCNGG	9 cut(s)	397, 952, 960, 988, 989, 1104, 1215, 2011, 2130
BstSFI	CTRYAG	2 cut(s)	473, 1982
BstUI	CGCG	3 cut(s)	1226, 1243, 1610
BstV2I	GAAGAC	4 cut(s)	240, 450, 1596, 2184
BstX2I	RGATCY	1 cut(s)	2221
BstXI	CCANNNNNNTGG	1 cut(s)	1855
BstYI	RGATCY	1 cut(s)	2221
Bsu36I	CCTNAGG	2 cut(s)	419, 1047
BsuI	GTATCC	1 cut(s)	554
BsuRI	GGCC	7 cut(s)	8, 352, 674, 1069, 1310, 1938, 2135
BtgI	CCRYGG	2 cut(s)	256, 1470
BtrI	CACGTC	1 cut(s)	2176
BtsCI	GGATG	5 cut(s)	230, 414, 544, 793, 1458
BtsI	GCAGTG	3 cut(s)	294, 1882, 1979
BtsIMutI	CAGTG	6 cut(s)	242, 294, 1407, 1882, 1979, 2075
Cac8I	GCNNGC	6 cut(s)	271, 621, 1164, 1523, 1940, 2210
CaiI	CAGNNNCTG	1 cut(s)	1766
CfoI	GCGC	5 cut(s)	1228, 1243, 1612, 1827, 2217
Cfr13I	GGNCC	7 cut(s)	350, 632, 673, 950, 964, 1051, 1884
Cfr9I	CCCGGG	1 cut(s)	989
CpoI	CGGWCCG	1 cut(s)	1884
CseI	GACGC	1 cut(s)	511
CsiI	ACCWGGT	1 cut(s)	960
Csp6I	GTAC	4 cut(s)	180, 974, 1220, 1999
CspCI	CAANNNNNGTGG	2 cut(s)	922, 957
CspI	CGGWCCG	1 cut(s)	1884
CviAII	CATG	9 cut(s)	10, 364, 620, 757, 778, 1493, 1540, 1613, 1742
CviQI	GTAC	4 cut(s)	180, 974, 1220, 1999
DdeI	CTNAG	9 cut(s)	183, 331, 390, 419, 798, 840, 856, 1014, 1047
DpnI	GATC	4 cut(s)	549, 1202, 1820, 2223
DpnII	GATC	4 cut(s)	547, 1200, 1818, 2221
DraI	TTTAAA	1 cut(s)	1483
Eam1104I	CTCTTC	2 cut(s)	64, 1743
EarI	CTCTTC	2 cut(s)	64, 1743
EciI	GGCGGA	1 cut(s)	585
Ecl136II	GAGCTC	1 cut(s)	1669
Eco147I	AGGCCT	1 cut(s)	1310
Eco24I	GRGCYC	3 cut(s)	189, 1015, 1671
Eco31I	GGTCTC	2 cut(s)	685, 1864
Eco47I	GGWCC	5 cut(s)	632, 950, 964, 1051, 1884
Eco53kI	GAGCTC	1 cut(s)	1669
Eco57I	CTGAAG	4 cut(s)	75, 1019, 1040, 1142
Eco81I	CCTNAGG	2 cut(s)	419, 1047
Eco88I	CYCGRG	2 cut(s)	989, 1638
Eco91I	GGTNACC	1 cut(s)	956
EcoICRI	GAGCTC	1 cut(s)	1669
EcoNI	CCTNNNNNAGG	1 cut(s)	1109
EcoO109I	RGGNCCY	1 cut(s)	1051
EcoO65I	GGTNACC	1 cut(s)	956
EcoRI	GAATTC	1 cut(s)	515
EcoRII	CCWGG	4 cut(s)	960, 1104, 2011, 2130
EcoT38I	GRGCYC	3 cut(s)	189, 1015, 1671
FaeI	CATG	9 cut(s)	13, 367, 623, 760, 781, 1496, 1543, 1616, 1745
FalI	AAGNNNNNCTT	8 cut(s)	1276, 1308, 1295, 1327, 1446, 1478, 2047, 2079
FaqI	GGGAC	2 cut(s)	379, 2113
FatI	CATG	9 cut(s)	9, 363, 619, 756, 777, 1492, 1539, 1612, 1741
FauI	CCCGC	3 cut(s)	132, 295, 1514
FokI	GGATG	5 cut(s)	217, 401, 551, 800, 1445
FriOI	GRGCYC	3 cut(s)	189, 1015, 1671
FspBI	CTAG	3 cut(s)	50, 1341, 1662
GlaI	GCGC	5 cut(s)	1227, 1242, 1611, 1826, 2216
HaeIII	GGCC	7 cut(s)	8, 352, 674, 1069, 1310, 1938, 2135
HapII	CCGG	9 cut(s)	399, 737, 753, 954, 990, 1217, 1882, 1935, 2159
HgaI	GACGC	1 cut(s)	511
HhaI	GCGC	5 cut(s)	1228, 1243, 1612, 1827, 2217
Hin1I	GRCGYC	1 cut(s)	522
Hin1II	CATG	9 cut(s)	13, 367, 623, 760, 781, 1496, 1543, 1616, 1745
Hin6I	GCGC	5 cut(s)	1226, 1241, 1610, 1825, 2215
HinP1I	GCGC	5 cut(s)	1226, 1241, 1610, 1825, 2215
HpaII	CCGG	9 cut(s)	399, 737, 753, 954, 990, 1217, 1882, 1935, 2159
HphI	GGTGA	8 cut(s)	99, 131, 491, 903, 1244, 1895, 2091, 2113
Hpy166II	GTNNAC	3 cut(s)	228, 846, 1407
Hpy188I	TCNGA	6 cut(s)	94, 391, 458, 527, 801, 1750
Hpy8I	GTNNAC	3 cut(s)	228, 846, 1407
Hpy99I	CGWCG	3 cut(s)	527, 925, 2180
HpyAV	CCTTC	5 cut(s)	34, 914, 1064, 1334, 2073
HpyCH4III	ACNGT	4 cut(s)	246, 978, 2079, 2190
HpyCH4IV	ACGT	2 cut(s)	1486, 2175
HpyF3I	CTNAG	9 cut(s)	183, 331, 390, 419, 798, 840, 856, 1014, 1047
HpySE526I	ACGT	2 cut(s)	1486, 2175
Hsp92I	GRCGYC	1 cut(s)	522
Hsp92II	CATG	9 cut(s)	13, 367, 623, 760, 781, 1496, 1543, 1616, 1745
HspAI	GCGC	5 cut(s)	1226, 1241, 1610, 1825, 2215
KpnI	GGTACC	1 cut(s)	977
Kzo9I	GATC	4 cut(s)	547, 1200, 1818, 2221
LmnI	GCTCC	4 cut(s)	266, 1326, 1790, 2010
LweI	GCATC	4 cut(s)	871, 1580, 1945, 1966
MabI	ACCWGGT	1 cut(s)	960
MaeI	CTAG	3 cut(s)	50, 1341, 1662
MaeII	ACGT	2 cut(s)	1486, 2175
MaeIII	GTNAC	7 cut(s)	434, 956, 1343, 1448, 1796, 1877, 2029
MalI	GATC	4 cut(s)	549, 1202, 1820, 2223
MboI	GATC	4 cut(s)	547, 1200, 1818, 2221
MfeI	CAATTG	3 cut(s)	887, 1316, 1851
MflI	RGATCY	1 cut(s)	2221
MhlI	GDGCHC	4 cut(s)	189, 900, 1015, 1671
MlyI	GAGTC	5 cut(s)	401, 802, 1715, 2135, 2149
MmeI	TCCRAC	2 cut(s)	505, 2032
MroXI	GAANNNNTTC	1 cut(s)	2062
MseI	TTAA	4 cut(s)	825, 1482, 1581, 1833
MslI	CAYNNNNRTG	2 cut(s)	1853, 2065
MspA1I	CMGCKG	6 cut(s)	83, 264, 273, 1060, 1144, 2152
MspI	CCGG	9 cut(s)	399, 737, 753, 954, 990, 1217, 1882, 1935, 2159
MspR9I	CCNGG	9 cut(s)	399, 954, 962, 990, 991, 1106, 1217, 2013, 2132
MunI	CAATTG	3 cut(s)	887, 1316, 1851
Mva1269I	GAATGC	1 cut(s)	1679
MvaI	CCWGG	4 cut(s)	962, 1106, 2013, 2132
MvnI	CGCG	3 cut(s)	1226, 1243, 1610
NciI	CCSGG	5 cut(s)	399, 954, 990, 991, 1217
NdeII	GATC	4 cut(s)	547, 1200, 1818, 2221
NlaIII	CATG	9 cut(s)	13, 367, 623, 760, 781, 1496, 1543, 1616, 1745
NlaIV	GGNNCC	5 cut(s)	268, 952, 975, 1786, 2171
NmeAIII	GCCGAG	3 cut(s)	1334, 2161, 2216
NmuCI	GTSAC	2 cut(s)	434, 1877
NspI	RCATGY	2 cut(s)	623, 760
NspV	TTCGAA	2 cut(s)	576, 1683
OliI	CACNNNNGTG	2 cut(s)	1853, 2065
PaeI	GCATGC	1 cut(s)	623
PaeR7I	CTCGAG	1 cut(s)	1638
PceI	AGGCCT	1 cut(s)	1310
PctI	GAATGC	1 cut(s)	1679
PdmI	GAANNNNTTC	1 cut(s)	2062
PfeI	GAWTC	5 cut(s)	95, 136, 573, 985, 1946
PflMI	CCANNNNNTGG	1 cut(s)	511
PleI	GAGTC	5 cut(s)	400, 802, 1714, 2134, 2149
PpsI	GAGTC	5 cut(s)	400, 802, 1714, 2134, 2149
PpuMI	RGGWCCY	1 cut(s)	1051
PsiI	TTATAA	1 cut(s)	1398
Psp124BI	GAGCTC	1 cut(s)	1671
Psp5II	RGGWCCY	1 cut(s)	1051
Psp6I	CCWGG	4 cut(s)	960, 1104, 2011, 2130
PspEI	GGTNACC	1 cut(s)	956
PspGI	CCWGG	4 cut(s)	960, 1104, 2011, 2130
PspN4I	GGNNCC	5 cut(s)	268, 952, 975, 1786, 2171
PspPI	GGNCC	7 cut(s)	350, 632, 673, 950, 964, 1051, 1884
PspPPI	RGGWCCY	1 cut(s)	1051
PstI	CTGCAG	2 cut(s)	477, 1986
PstNI	CAGNNNCTG	1 cut(s)	1766
PsuI	RGATCY	1 cut(s)	2221
RsaI	GTAC	4 cut(s)	181, 975, 1221, 2000
RsaNI	GTAC	4 cut(s)	180, 974, 1220, 1999
RseI	CAYNNNNRTG	2 cut(s)	1853, 2065
Rsr2I	CGGWCCG	1 cut(s)	1884
RsrII	CGGWCCG	1 cut(s)	1884
SacI	GAGCTC	1 cut(s)	1671
SaqAI	TTAA	4 cut(s)	825, 1482, 1581, 1833
Sau3AI	GATC	4 cut(s)	547, 1200, 1818, 2221
Sau96I	GGNCC	7 cut(s)	350, 632, 673, 950, 964, 1051, 1884
ScaI	AGTACT	1 cut(s)	181
SchI	GAGTC	5 cut(s)	401, 802, 1715, 2135, 2149
ScrFI	CCNGG	9 cut(s)	399, 954, 962, 990, 991, 1106, 1217, 2013, 2132
SduI	GDGCHC	4 cut(s)	189, 900, 1015, 1671
SexAI	ACCWGGT	1 cut(s)	960
SfaNI	GCATC	4 cut(s)	871, 1580, 1945, 1966
SfcI	CTRYAG	2 cut(s)	473, 1982
Sfr274I	CTCGAG	1 cut(s)	1638
SfuI	TTCGAA	2 cut(s)	576, 1683
SinI	GGWCC	5 cut(s)	632, 950, 964, 1051, 1884
SlaI	CTCGAG	1 cut(s)	1638
SmaI	CCCGGG	1 cut(s)	991
SmiMI	CAYNNNNRTG	2 cut(s)	1853, 2065
SmlI	CTYRAG	3 cut(s)	1555, 1638, 1703
SmoI	CTYRAG	3 cut(s)	1555, 1638, 1703
SphI	GCATGC	1 cut(s)	623
SseBI	AGGCCT	1 cut(s)	1310
SspMI	CTAG	3 cut(s)	50, 1341, 1662
SstI	GAGCTC	1 cut(s)	1671
StuI	AGGCCT	1 cut(s)	1310
StyD4I	CCNGG	9 cut(s)	397, 952, 960, 988, 989, 1104, 1215, 2011, 2130
TaaI	ACNGT	4 cut(s)	246, 978, 2079, 2190
TaiI	ACGT	2 cut(s)	1489, 2178
TaqII	GACCGA	1 cut(s)	1901
TatI	WGTACW	1 cut(s)	179
TfiI	GAWTC	5 cut(s)	95, 136, 573, 985, 1946
Tru1I	TTAA	4 cut(s)	825, 1482, 1581, 1833
Tru9I	TTAA	4 cut(s)	825, 1482, 1581, 1833
TscAI	CASTG	6 cut(s)	249, 301, 1414, 1882, 1986, 2082
TseFI	GTSAC	2 cut(s)	434, 1877
Tsp45I	GTSAC	2 cut(s)	434, 1877
TspDTI	ATGAA	7 cut(s)	17, 87, 1145, 1481, 1528, 1632, 1730
TspGWI	ACGGA	1 cut(s)	909
TspMI	CCCGGG	1 cut(s)	989
TspRI	CASTG	6 cut(s)	249, 301, 1414, 1882, 1986, 2082
Van91I	CCANNNNNTGG	1 cut(s)	511
VpaK11BI	GGWCC	5 cut(s)	632, 950, 964, 1051, 1884
XagI	CCTNNNNNAGG	1 cut(s)	1109
XapI	RAATTY	3 cut(s)	508, 515, 1619
XceI	RCATGY	2 cut(s)	623, 760
XcmI	CCANNNNNNNNNTGG	1 cut(s)	683
XhoI	CTCGAG	1 cut(s)	1638
XmaI	CCCGGG	1 cut(s)	989
XmnI	GAANNNNTTC	1 cut(s)	2062
XspI	CTAG	3 cut(s)	50, 1341, 1662
ZrmI	AGTACT	1 cut(s)	181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.