Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002481

Physical Location & Seq

Genomic Coordinates Reverse (-)

40893300 .. 40896262

Gene Structure 2963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G018550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAAGGCCATGCCCCTACCCTTTGAGGAGTTTCAAGGGAAGGGGGTGTTAGATTTCTCATCTGATTCTTCAGATTTGTTAGCTTCACCAGCACCACAGGGCCACCATCAGCAACCTCAAAAGTGGAAGGAGAATTGCTATGTGGGCAGCACTGAGCCCACTTCTGTTCTCGATACCAGAAGAAGCCCAAGCCCTCCTACATCCTCTTCAACTCTGTCTTCTTCTCACGGCAGCGGCGGTGGAAGTGGGTCTACAGATACCACCCCTACCACCGGCGTGGCGGCTGCGGCTCCGGCAGAAAACAAGCCATCTGAAGCAGGTCTAGAAGAAGCAAAATGTGGACCACCACTTGGAATGGAGGACTGGGAGAGTGTGCTGTCTGAGTCACCAGGTCAAGAGCAGTCCATTCTTAGGTTGATGATGAGTGACATTGAAGACCCATCTCTTGGATTGAACAAGCTGTTGCAGAGTGGGGTTGGTTCTCATCAAGATTTTGGGTTTCATGATGTGGTGGAGGATCAAGGTTATGGCGCCTTTGAAGAACACAATACAGGGAGTTTGAATCTGGGGATGAGCAGCATTGCTAACCCTTCTCTGCAAGCAACATCTTGTTCTGAAATTCCTTTCAATGGCTCAAATGCTACCGTTTTCTCTGCTTCAGCGAACAATCTGTTCCCAGGTTCACTACCTCCTGGTTTGTTCCAACAGCAACAACAATTGGTTGAGCCTTTGGATGAGAAGCCACAAATTTTCAATCCACATATGGTGATGAATCAAAACCAAGCTCAGTTTAATCAAAATCCTGCGATGTTTATGCCACTCTCGTATTCCCAATTGCAAGACCACCACTTCCTTTCCCCACCTCCGGCAAAAAGGCATAATTCCGGTGGCTTTGGACCCAGTTACCCGGGCCAGAGATTGCCGTTTTTGAATCCGGGTCAAGAGCTAATGGCTCGGGTACAACATCATCAGCAGCAGCAGCAGCAGCAGCTTCCGTTGCTTCCACAACATCTCCAACACAGGCCAGTAATGTTAGCCGCGAAGGACAAAATGGTGAACAATCTGGAAGGGGATAAAGAATTGATGAACAACCACCAGCTTCATCAAGCGATAGTTGACCAGCTTGTCAATGCAGCAGAGCTGATCGAAACAGGCAATCCGTTACTCGCGCAAGGGATATTGGCGCGGCTCAATCAACAGCTCTCTCCTATTGGTAAGCCTTTTCAAAGGGCTGCTTTTTATTTCAAGGAGGCCTTGGAATTACTACTTAACATGAACAACTCTCACTCTTCTGCTAATTTGTCACCTTTTAGCCTCGTTTACAAGATTGCTGCATATAAATCATTCTCTGAAATCTCACCAGTTCTCCAATTTGCCAACTTTACTTGCAACCAAGCCATCCTTGAATCTGTGGAAGGCTTTAATCGTGTCCATGTTATCGATTTTGATATTGGCTATGGTGGGCAATGGGCTTCTTTTATGCAAGAGGTGGCTTTAAGAAATGGTGGTTCTCCTCCTTCTCTCAAAATCACTGCATTTGTATGCTCTTCGATGCACGATGAATTCGAGCTGGCTTTCACTCAAGAAAACCTCAAGAACTTTGCTTGTGAGCTCAATTTGGCATTTGAACTCGAAATTGTAAGTATTGAGGCATTGAACTCTGGTTCTTGGCCATTACCACTTCATGGCTCAGAGGGTGTGGCAGTTGCTGTCAATCTTCCAATTGCTTCCTTCTTGAATTCCCATTTATCGCTTCCTTTGGTCCTGCGCTTTGTTAAGCAGCTTTCTCCCAAAATTGTGGTATCCTTGGAAAGGGGCAGTGACCGGACTGATATCCCATTTCCCCACCAAATCATTCAAGCCGTTCACTGTTACTCAAGCCTTCTTGAATCATTAGATGCTGTAAATGCAAACCTAGATGCCCTGCAAAAGATTGAGCGGTACTTGCTCCAACCAAGCATTGAAAAGATTGTAATGGGCTGCCATCTTTCTCCTAAAAGGACACCGACACCTTCTTGGAGGACTCTGTTTTTGTCATCTGGGTTCTCCCCGTTGACATTCAGCAATTTCACCGAGTCCCAAGCCGATTGCTTGGTGCAACGGACTCCAGTTGGGGGTTTCCATGTTGAGAAGAGACAGTCTTCGCTTGTGCTCTGCTGGCAGCGGAAGGATCTCATCTCAGCCTCAGGGTGGCGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007623 GO:0008150 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048511 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071840 GO:0080090 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

733

Amino Acids

80.27

Weight (kDa)

5.51

Isoelectric Point (pI)

58.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	372 - 732	2.6e-94	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00150
fragaria_vesca	FvH4_5g00020 FvH4_5g00020 FvH4_7g11120
malus_domestica	MD00G1043300.v1.1 MD02G1210200.v1.1 MD04G1088100.v1.1 MD07G1115800.v1.1
prunus_persica	Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.5G072300_v2.0.a1 Prupe.5G072300_v2.0.a1
pyrus_communis	pycom02g17200 pycom06g05130 pycom07g10860
rosa_chinensis	RchiOBHm_Chr1g0349141 RchiOBHm_Chr7g0202931
rosa_laevigata	RLG00000003564 RLG00000028602
rosa_multiflora	Rmu_co8366677.1_g000001 Rmu_co8449587.1_g000001 Rmu_sc0008159.1_g000016 Rmu_ssc0000150.1_g000020
rosa_roxburghii	Rroxscaffold_3G00254180 Rroxscaffold_4G00306070
rosa_rugosa	Rorug01G0200700 Rorug07G0074000
rosa_samantha	Rh1AG218400 Rh1BG183800 Rh1CG202900 Rh1DG213600 Rh7AG201800 Rh7BG202000 Rh7CG213100 Rh7DG208800
rosa_wichuraiana	Rw1G018550 Rw7G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1124
Acc36I	ACCTGC	1 cut(s)	308
AccB1I	GGYRCC	1 cut(s)	530
AccB7I	CCANNNNNTGG	3 cut(s)	350, 446, 1685
AccBSI	CCGCTC	1 cut(s)	1939
AccI	GTMKAC	1 cut(s)	251
AccII	CGCG	3 cut(s)	1040, 1169, 1186
AciI	CCGC	9 cut(s)	234, 237, 281, 287, 1038, 1186, 1939, 2164, 2194
AclWI	GGATC	2 cut(s)	525, 2178
AcoI	YGGCCR	1 cut(s)	1670
AcsI	RAATTY	4 cut(s)	618, 747, 1562, 1738
AcuI	CTGAAG	3 cut(s)	54, 333, 642
AcyI	GRCGYC	1 cut(s)	531
AfaI	GTAC	2 cut(s)	960, 1943
AjnI	CCWGG	3 cut(s)	388, 676, 691
AleI	CACNNNNGTG	1 cut(s)	275
Alw21I	GWGCWC	2 cut(s)	1614, 2154
Alw26I	GTCTC	1 cut(s)	2128
AlwI	GGATC	2 cut(s)	525, 2178
AlwNI	CAGNNNCTG	1 cut(s)	1709
Ama87I	CYCGRG	2 cut(s)	907, 954
AoxI	GGCC	6 cut(s)	6, 100, 910, 1022, 1251, 1670
ApoI	RAATTY	4 cut(s)	618, 747, 1562, 1738
ArsI	GACNNNNNNTTYG	2 cut(s)	2014, 2046
AspLEI	GCGC	4 cut(s)	533, 1171, 1186, 1770
AspS9I	GGNCC	5 cut(s)	100, 341, 896, 910, 1762
AsuC2I	CCSGG	3 cut(s)	908, 909, 936
AsuHPI	GGTGA	7 cut(s)	78, 378, 778, 1066, 1296, 1350, 2062
AvaI	CYCGRG	2 cut(s)	907, 954
AvaII	GGWCC	3 cut(s)	341, 896, 1762
AxyI	CCTNAGG	1 cut(s)	2185
BalI	TGGCCA	1 cut(s)	1672
BanI	GGYRCC	1 cut(s)	530
BanII	GRGCYC	2 cut(s)	159, 1614
BarI	GAAGNNNNNNTAC	2 cut(s)	235, 267
BbsI	GAAGAC	3 cut(s)	210, 441, 2133
Bbv12I	GWGCWC	2 cut(s)	1614, 2154
BccI	CCATC	5 cut(s)	114, 316, 448, 1406, 1992
BceAI	ACGGC	3 cut(s)	244, 907, 1847
BcgI	CGANNNNNNTGC	2 cut(s)	796, 830
BciT130I	CCWGG	3 cut(s)	390, 678, 693
BciVI	GTATCC	1 cut(s)	1813
BcnI	CCSGG	3 cut(s)	908, 909, 936
BcoDI	GTCTC	1 cut(s)	2128
BfaI	CTAG	2 cut(s)	323, 1916
BfmI	CTRYAG	1 cut(s)	252
BfoI	RGCGCY	1 cut(s)	534
BfuAI	ACCTGC	1 cut(s)	308
BfuI	GTATCC	1 cut(s)	1813
Bme1390I	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
Bme18I	GGWCC	3 cut(s)	341, 896, 1762
BmeT110I	CYCGRG	2 cut(s)	907, 954
BmgT120I	GGNCC	5 cut(s)	100, 341, 896, 910, 1762
BmiI	GGNNCC	3 cut(s)	291, 532, 898
BmrFI	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
BmrI	ACTGGG	2 cut(s)	373, 894
BmsI	GCATC	3 cut(s)	1542, 1888, 1909
BmuI	ACTGGG	2 cut(s)	373, 894
BpiI	GAAGAC	3 cut(s)	210, 441, 2133
BpmI	CTGGAG	1 cut(s)	2091
BpuEI	CTTGAG	3 cut(s)	1566, 1577, 1861
BpuMI	CCSGG	3 cut(s)	908, 909, 936
Bsa29I	ATCGAT	1 cut(s)	1440
BsaHI	GRCGYC	1 cut(s)	531
BsaJI	CCNNGG	4 cut(s)	676, 907, 1254, 1806
BsaWI	WCCGGW	2 cut(s)	884, 1824
BsaXI	ACNNNNNCTCC	4 cut(s)	996, 1026, 1350, 1380
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	5 cut(s)	368, 900, 1025, 1361, 2108
Bse21I	CCTNAGG	1 cut(s)	2185
Bse3DI	GCAATG	2 cut(s)	579, 1472
BseBI	CCWGG	3 cut(s)	390, 678, 693
BseCI	ATCGAT	1 cut(s)	1440
BseDI	CCNNGG	4 cut(s)	676, 907, 1254, 1806
BseGI	GGATG	4 cut(s)	200, 576, 739, 1398
BseMI	GCAATG	2 cut(s)	579, 1472
BseMII	CTCAG	6 cut(s)	144, 372, 800, 1704, 2193, 2199
BseNI	ACTGG	5 cut(s)	368, 900, 1025, 1361, 2108
BseRI	GAGGAG	2 cut(s)	41, 1503
Bsh1236I	CGCG	3 cut(s)	1040, 1169, 1186
BshFI	GGCC	6 cut(s)	8, 102, 912, 1024, 1253, 1672
BshNI	GGYRCC	1 cut(s)	530
BshVI	ATCGAT	1 cut(s)	1440
BsiHKAI	GWGCWC	2 cut(s)	1614, 2154
BsiHKCI	CYCGRG	2 cut(s)	907, 954
BsiSI	CCGG	7 cut(s)	273, 293, 866, 885, 908, 935, 1825
BslFI	GGGAC	1 cut(s)	2062
BsmAI	GTCTC	1 cut(s)	2128
BsmFI	GGGAC	1 cut(s)	2062
BsnI	GGCC	6 cut(s)	8, 102, 912, 1024, 1253, 1672
BsoBI	CYCGRG	2 cut(s)	907, 954
Bsp1286I	GDGCHC	3 cut(s)	159, 1614, 2154
Bsp143I	GATC	3 cut(s)	517, 1143, 2170
BspACI	CCGC	9 cut(s)	234, 237, 281, 287, 1038, 1186, 1939, 2164, 2194
BspANI	GGCC	6 cut(s)	8, 102, 912, 1024, 1253, 1672
BspCNI	CTCAG	6 cut(s)	145, 373, 799, 1703, 2192, 2198
BspDI	ATCGAT	1 cut(s)	1440
BspFNI	CGCG	3 cut(s)	1040, 1169, 1186
BspHI	TCATGA	1 cut(s)	502
BspLI	GGNNCC	3 cut(s)	291, 532, 898
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	2 cut(s)	525, 2178
BspQI	GCTCTTC	1 cut(s)	1552
BspT107I	GGYRCC	1 cut(s)	530
BsrBI	CCGCTC	1 cut(s)	1939
BsrDI	GCAATG	2 cut(s)	579, 1472
BsrFI	RCCGGY	1 cut(s)	272
BsrI	ACTGG	5 cut(s)	368, 900, 1025, 1361, 2108
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	4 cut(s)	676, 907, 1254, 1806
BssMI	GATC	3 cut(s)	517, 1143, 2170
BssNI	GRCGYC	1 cut(s)	531
BssT1I	CCWWGG	2 cut(s)	1254, 1806
Bst2UI	CCWGG	3 cut(s)	390, 678, 693
Bst4CI	ACNGT	3 cut(s)	646, 1871, 2139
Bst6I	CTCTTC	4 cut(s)	211, 1294, 1552, 2126
BstACI	GRCGYC	1 cut(s)	531
BstC8I	GCNNGC	3 cut(s)	600, 1572, 2159
BstDEI	CTNAG	7 cut(s)	153, 381, 410, 786, 1690, 2179, 2185
BstENI	CCTNNNNNAGG	1 cut(s)	1810
BstF5I	GGATG	4 cut(s)	200, 576, 739, 1398
BstFNI	CGCG	3 cut(s)	1040, 1169, 1186
BstH2I	RGCGCY	1 cut(s)	534
BstHHI	GCGC	4 cut(s)	533, 1171, 1186, 1770
BstKTI	GATC	3 cut(s)	520, 1146, 2173
BstMAI	GTCTC	1 cut(s)	2128
BstMBI	GATC	3 cut(s)	517, 1143, 2170
BstNI	CCWGG	3 cut(s)	390, 678, 693
BstSCI	CCNGG	6 cut(s)	388, 676, 691, 906, 907, 934
BstSFI	CTRYAG	1 cut(s)	252
BstUI	CGCG	3 cut(s)	1040, 1169, 1186
BstV2I	GAAGAC	3 cut(s)	210, 441, 2133
BstX2I	RGATCY	1 cut(s)	2170
BstXI	CCANNNNNNTGG	2 cut(s)	277, 1798
BstYI	RGATCY	1 cut(s)	2170
Bsu15I	ATCGAT	1 cut(s)	1440
Bsu36I	CCTNAGG	1 cut(s)	2185
BsuI	GTATCC	1 cut(s)	1813
BsuRI	GGCC	6 cut(s)	8, 102, 912, 1024, 1253, 1672
BsuTUI	ATCGAT	1 cut(s)	1440
BtgZI	GCGATG	1 cut(s)	821
BtsCI	GGATG	4 cut(s)	200, 576, 739, 1398
BtsI	GCAGTG	2 cut(s)	1530, 1825
BtsIMutI	CAGTG	4 cut(s)	150, 1530, 1825, 1867
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	3 cut(s)	600, 1572, 2159
CaiI	CAGNNNCTG	1 cut(s)	1709
CciI	TCATGA	1 cut(s)	502
CfoI	GCGC	4 cut(s)	533, 1171, 1186, 1770
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	5 cut(s)	100, 341, 896, 910, 1762
Cfr9I	CCCGGG	1 cut(s)	907
ClaI	ATCGAT	1 cut(s)	1440
CsiI	ACCWGGT	1 cut(s)	388
Csp6I	GTAC	2 cut(s)	959, 1942
CviAII	CATG	6 cut(s)	10, 503, 1273, 1433, 1685, 2123
CviQI	GTAC	2 cut(s)	959, 1942
DdeI	CTNAG	7 cut(s)	153, 381, 410, 786, 1690, 2179, 2185
DinI	GGCGCC	1 cut(s)	532
DpnI	GATC	3 cut(s)	519, 1145, 2172
DpnII	GATC	3 cut(s)	517, 1143, 2170
DrdI	GACNNNNNNGTC	1 cut(s)	1124
DseDI	GACNNNNNNGTC	1 cut(s)	1124
EaeI	YGGCCR	1 cut(s)	1670
Eam1104I	CTCTTC	4 cut(s)	211, 1294, 1552, 2126
EarI	CTCTTC	4 cut(s)	211, 1294, 1552, 2126
Ecl136II	GAGCTC	1 cut(s)	1612
Eco130I	CCWWGG	2 cut(s)	1254, 1806
Eco147I	AGGCCT	1 cut(s)	1253
Eco24I	GRGCYC	2 cut(s)	159, 1614
Eco32I	GATATC	1 cut(s)	1834
Eco47I	GGWCC	3 cut(s)	341, 896, 1762
Eco53kI	GAGCTC	1 cut(s)	1612
Eco57I	CTGAAG	3 cut(s)	54, 333, 642
Eco81I	CCTNAGG	1 cut(s)	2185
Eco88I	CYCGRG	2 cut(s)	907, 954
EcoICRI	GAGCTC	1 cut(s)	1612
EcoNI	CCTNNNNNAGG	1 cut(s)	1810
EcoRI	GAATTC	2 cut(s)	1562, 1738
EcoRII	CCWGG	3 cut(s)	388, 676, 691
EcoRV	GATATC	1 cut(s)	1834
EcoT14I	CCWWGG	2 cut(s)	1254, 1806
EcoT38I	GRGCYC	2 cut(s)	159, 1614
EgeI	GGCGCC	1 cut(s)	532
EheI	GGCGCC	1 cut(s)	532
ErhI	CCWWGG	2 cut(s)	1254, 1806
FaeI	CATG	6 cut(s)	13, 506, 1276, 1436, 1688, 2126
FalI	AAGNNNNNCTT	6 cut(s)	1219, 1251, 1238, 1270, 1386, 1418
FaqI	GGGAC	1 cut(s)	2062
FatI	CATG	6 cut(s)	9, 502, 1272, 1432, 1684, 2122
FauNDI	CATATG	1 cut(s)	762
FblI	GTMKAC	1 cut(s)	251
FokI	GGATG	4 cut(s)	187, 583, 746, 1385
FriOI	GRGCYC	2 cut(s)	159, 1614
FspBI	CTAG	2 cut(s)	323, 1916
GlaI	GCGC	4 cut(s)	532, 1170, 1185, 1769
GsuI	CTGGAG	1 cut(s)	2091
HaeII	RGCGCY	1 cut(s)	534
HaeIII	GGCC	6 cut(s)	8, 102, 912, 1024, 1253, 1672
HapII	CCGG	7 cut(s)	273, 293, 866, 885, 908, 935, 1825
HhaI	GCGC	4 cut(s)	533, 1171, 1186, 1770
Hin1I	GRCGYC	1 cut(s)	531
Hin1II	CATG	6 cut(s)	13, 506, 1276, 1436, 1688, 2126
Hin6I	GCGC	4 cut(s)	531, 1169, 1184, 1768
HinP1I	GCGC	4 cut(s)	531, 1169, 1184, 1768
HincII	GTYRAC	2 cut(s)	1117, 2055
HindII	GTYRAC	2 cut(s)	1117, 2055
HpaII	CCGG	7 cut(s)	273, 293, 866, 885, 908, 935, 1825
HphI	GGTGA	7 cut(s)	78, 378, 778, 1066, 1296, 1350, 2062
Hpy166II	GTNNAC	8 cut(s)	252, 341, 683, 1057, 1117, 1321, 1867, 2055
Hpy188I	TCNGA	7 cut(s)	64, 73, 313, 382, 616, 1351, 1693
Hpy8I	GTNNAC	8 cut(s)	252, 341, 683, 1057, 1117, 1321, 1867, 2055
HpyCH4III	ACNGT	3 cut(s)	646, 1871, 2139
HpyF3I	CTNAG	7 cut(s)	153, 381, 410, 786, 1690, 2179, 2185
Hsp92I	GRCGYC	1 cut(s)	531
Hsp92II	CATG	6 cut(s)	13, 506, 1276, 1436, 1688, 2126
HspAI	GCGC	4 cut(s)	531, 1169, 1184, 1768
KasI	GGCGCC	1 cut(s)	530
Kzo9I	GATC	3 cut(s)	517, 1143, 2170
LguI	GCTCTTC	1 cut(s)	1552
LmnI	GCTCC	2 cut(s)	295, 1953
LweI	GCATC	3 cut(s)	1542, 1888, 1909
MabI	ACCWGGT	1 cut(s)	388
MaeI	CTAG	2 cut(s)	323, 1916
MaeIII	GTNAC	7 cut(s)	384, 425, 902, 1161, 1302, 1820, 1871
MalI	GATC	3 cut(s)	519, 1145, 2172
MbiI	CCGCTC	1 cut(s)	1939
MboI	GATC	3 cut(s)	517, 1143, 2170
MfeI	CAATTG	3 cut(s)	716, 833, 1722
MflI	RGATCY	1 cut(s)	2170
MhlI	GDGCHC	3 cut(s)	159, 1614, 2154
MlsI	TGGCCA	1 cut(s)	1672
MluNI	TGGCCA	1 cut(s)	1672
Mly113I	GGCGCC	1 cut(s)	531
MlyI	GAGTC	4 cut(s)	392, 2017, 2084, 2098
MmeI	TCCRAC	3 cut(s)	727, 1039, 1975
Mox20I	TGGCCA	1 cut(s)	1672
MscI	TGGCCA	1 cut(s)	1672
MseI	TTAA	5 cut(s)	792, 1269, 1422, 1496, 1776
MslI	CAYNNNNRTG	2 cut(s)	275, 1540
Msp20I	TGGCCA	1 cut(s)	1672
MspA1I	CMGCKG	2 cut(s)	234, 2164
MspI	CCGG	7 cut(s)	273, 293, 866, 885, 908, 935, 1825
MspR9I	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
MunI	CAATTG	3 cut(s)	716, 833, 1722
MvaI	CCWGG	3 cut(s)	390, 678, 693
MvnI	CGCG	3 cut(s)	1040, 1169, 1186
NarI	GGCGCC	1 cut(s)	531
NciI	CCSGG	3 cut(s)	908, 909, 936
NdeI	CATATG	1 cut(s)	762
NdeII	GATC	3 cut(s)	517, 1143, 2170
NlaIII	CATG	6 cut(s)	13, 506, 1276, 1436, 1688, 2126
NlaIV	GGNNCC	3 cut(s)	291, 532, 898
NmuCI	GTSAC	4 cut(s)	384, 425, 1302, 1820
OliI	CACNNNNGTG	1 cut(s)	275
PagI	TCATGA	1 cut(s)	502
PceI	AGGCCT	1 cut(s)	1253
PciSI	GCTCTTC	1 cut(s)	1552
PcsI	WCGNNNNNNNCGW	1 cut(s)	1563
PfeI	GAWTC	6 cut(s)	65, 562, 772, 931, 1406, 1889
PflMI	CCANNNNNTGG	3 cut(s)	350, 446, 1685
PleI	GAGTC	4 cut(s)	391, 2017, 2083, 2098
PluTI	GGCGCC	1 cut(s)	534
PpsI	GAGTC	4 cut(s)	391, 2017, 2083, 2098
Psp124BI	GAGCTC	1 cut(s)	1614
Psp6I	CCWGG	3 cut(s)	388, 676, 691
PspGI	CCWGG	3 cut(s)	388, 676, 691
PspN4I	GGNNCC	3 cut(s)	291, 532, 898
PspPI	GGNCC	5 cut(s)	100, 341, 896, 910, 1762
PstNI	CAGNNNCTG	1 cut(s)	1709
PsuI	RGATCY	1 cut(s)	2170
RsaI	GTAC	2 cut(s)	960, 1943
RsaNI	GTAC	2 cut(s)	959, 1942
RseI	CAYNNNNRTG	2 cut(s)	275, 1540
SacI	GAGCTC	1 cut(s)	1614
SapI	GCTCTTC	1 cut(s)	1552
SaqAI	TTAA	5 cut(s)	792, 1269, 1422, 1496, 1776
Sau3AI	GATC	3 cut(s)	517, 1143, 2170
Sau96I	GGNCC	5 cut(s)	100, 341, 896, 910, 1762
SchI	GAGTC	4 cut(s)	392, 2017, 2084, 2098
ScrFI	CCNGG	6 cut(s)	390, 678, 693, 908, 909, 936
SduI	GDGCHC	3 cut(s)	159, 1614, 2154
SexAI	ACCWGGT	1 cut(s)	388
SfaNI	GCATC	3 cut(s)	1542, 1888, 1909
SfcI	CTRYAG	1 cut(s)	252
SfoI	GGCGCC	1 cut(s)	532
SgrAI	CRCCGGYG	1 cut(s)	272
SinI	GGWCC	3 cut(s)	341, 896, 1762
SmaI	CCCGGG	1 cut(s)	909
SmiMI	CAYNNNNRTG	2 cut(s)	275, 1540
SmlI	CTYRAG	3 cut(s)	1581, 1592, 1876
SmoI	CTYRAG	3 cut(s)	1581, 1592, 1876
SseBI	AGGCCT	1 cut(s)	1253
SsiI	CCGC	9 cut(s)	234, 237, 281, 287, 1038, 1186, 1939, 2164, 2194
SspDI	GGCGCC	1 cut(s)	530
SspMI	CTAG	2 cut(s)	323, 1916
SstI	GAGCTC	1 cut(s)	1614
StuI	AGGCCT	1 cut(s)	1253
StyD4I	CCNGG	6 cut(s)	388, 676, 691, 906, 907, 934
StyI	CCWWGG	2 cut(s)	1254, 1806
TaaI	ACNGT	3 cut(s)	646, 1871, 2139
TaqI	TCGA	6 cut(s)	171, 1146, 1440, 1550, 1566, 1632
TauI	GCSGC	5 cut(s)	237, 284, 290, 1040, 1189
TfiI	GAWTC	6 cut(s)	65, 562, 772, 931, 1406, 1889
Tru1I	TTAA	5 cut(s)	792, 1269, 1422, 1496, 1776
Tru9I	TTAA	5 cut(s)	792, 1269, 1422, 1496, 1776
TscAI	CASTG	4 cut(s)	157, 1537, 1825, 1874
TseFI	GTSAC	4 cut(s)	384, 425, 1302, 1820
Tsp45I	GTSAC	4 cut(s)	384, 425, 1302, 1820
TspDTI	ATGAA	8 cut(s)	17, 491, 785, 1091, 1100, 1289, 1575, 1673
TspGWI	ACGGA	3 cut(s)	984, 1149, 2116
TspMI	CCCGGG	1 cut(s)	907
TspRI	CASTG	4 cut(s)	157, 1537, 1825, 1874
Van91I	CCANNNNNTGG	3 cut(s)	350, 446, 1685
VpaK11BI	GGWCC	3 cut(s)	341, 896, 1762
XagI	CCTNNNNNAGG	1 cut(s)	1810
XapI	RAATTY	4 cut(s)	618, 747, 1562, 1738
XbaI	TCTAGA	1 cut(s)	322
XmaI	CCCGGG	1 cut(s)	907
XmiI	GTMKAC	1 cut(s)	251
XspI	CTAG	2 cut(s)	323, 1916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.