Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0002481

Physical Location & Seq

Genomic Coordinates Forward (+)

14916521 .. 14918410

Gene Structure 1890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g17200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGAGGACTGGGAGAGCGTTCTGTCTGAGTCCCCAGGTCAAGAGCAGTCCATCCTAAGGTTGATTATGAGTGACATCGAAGACCCCTCTCTCGGATTGAACACGCTGCTGCAGAGTTCAAGCGGTTCTGATCATCACCACCAAAATTTGGAATTCGGCTGCGGAGGGTTTCAGGATGTGGTGGATCAAGGCGGAGGATACAGCGGCGGCTTCGAACCCGATGATCATTTTGGGGGTTTGGTTAGCCCCTCTCTGCGCGCAAGTTCTGGTCCTGATTTTAATTTCAGTAATAATGCCTCAAATGTTGAGACTCAGAGCAGCAATGTGAGACCAAACCCTACAATGTTCTCTGCTTCAATGAGTAATCCTTTTCCGGTTTCGCTGTCTTCCGGCATGTTTCAGCGGCAACAGAACATGGGTCTGGAGGAGAAGCCTCAGATTTTCAATCCCCAGATGGTAATTAACCAAAACCAAGCTGAGTCTACACAGAACCCAGCTATGTTTATGCCTTTGACATATGCCCAATTGCAAGACCACCACCTTCTCTCACCGCCTCCGTCGAAAAGGCTCAATTCTGGTGGATTTGGACCCGGTTACCCAGTCCAAAGGGCACCCTTTTTGAATCCCGGGTCAGAGCTATTGGTTCAGGCTCAGCAACAGCAGCAGCAGCTTCAGTTTCTTCCTCAGCACCTTCAGCATCAGAGGCCAACAATGCCGGTGGCAAAGGAGAAAATGATGAGCCCGGCAGAGGGCGGTAAAGAAATGATGAACCAGAACCACCAGCAGCCGCAGCTTGAGCAAGCAGTAATTGACCAGCTTTTCAATGCAGCAGAGCTGATCGAAACAGGAAATCCGGTACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTCCCATTGGTAAGCCTTTTTCAAGGGCTGCTTTCTACTTCAAGGAGGCCTTGCAATTGCTCCTTCACATCAACACCTCTAGTAACTCTTCTTCGGCTTTGTCGCCTTTTAGCCTCATTTTCAAGATTGGTGCTTATAAATCGTTCTCTGAAATCTCGCCTGTTGTCCAATTTGCCAACTTTACTTGTAACCAAGCCATCCTTGAAGCCGTGGAGGGCTTTAATCGTGTTCATGTTATTGATTTTGATATTGGCTATGGCGGGCAATGGGCTTCTTTCATGCAAGAAGTTGCCTTGAGAAATGGGGGTGCATCTTCTCTTAAAATCACTGCATTTATATCGTCTTCCGCGCATGATGAATTTGAGGTTAGTTTCACTCGAGAAAACCTCAAACACTTTGCTAGTGAGCTCAACTTGGCATTCGAACTTGAACTTGTGAGCCTTGAGTCGTTGAACTCTGGTTCGTGGGGATTGCCTATTCATGCTTCTGACCGCGTGGCAATTGCTGTCAATCTCCCGATTGGCTCCTTTTCGAGTAACCCTTTATTGCTTCCATTGATCTTGCGCTTTGTTAAGCAGCTTTCTCCCAGAATTGTTGTCTCTTTGGACAGAGGCAGTGATCGGACCGATGTTCCATTTCCCCACCAAATAATCCAAGCCCTCCACTCTTACTCCGGCCTGCTTGAATCAATAGATGCTGTCAATGTAAACCCAGATGCACTGCAGAAGATTGAGAGGTACTTGCTCCAACCAGGCATTGAAAAGATTGTAACAGGCCGCCATCATTCCCCTAAAAGAACACCTTCCTGGAGGGCACTGTTTTTGTCATCTGGGTTCTCACCATTGACATTCAGCAATTTCACCGAGTCCCAGGCCGAGTACTTGGTGCAGCGGACTCCGGTTGGGGGGTTCCACGTCGAGAAGAGACAGTCTTCGCTTGTTCTCTGCTGGCAGCGCAAGGATCTCATTTCTGCCTCAGCTTGGAGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007623 GO:0008150 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048511 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071840 GO:0080090 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

630

Amino Acids

69.41

Weight (kDa)

5.73

Isoelectric Point (pI)

56.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	271 - 628	2.5e-91	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00150
fragaria_vesca	FvH4_5g00020 FvH4_5g00020 FvH4_7g11120
malus_domestica	MD00G1043300.v1.1 MD02G1210200.v1.1 MD04G1088100.v1.1 MD07G1115800.v1.1
prunus_persica	Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.5G072300_v2.0.a1 Prupe.5G072300_v2.0.a1
pyrus_communis	pycom02g17200 pycom06g05130 pycom07g10860
rosa_chinensis	RchiOBHm_Chr1g0349141 RchiOBHm_Chr7g0202931
rosa_laevigata	RLG00000003564 RLG00000028602
rosa_multiflora	Rmu_co8366677.1_g000001 Rmu_co8449587.1_g000001 Rmu_sc0008159.1_g000016 Rmu_ssc0000150.1_g000020
rosa_roxburghii	Rroxscaffold_3G00254180 Rroxscaffold_4G00306070
rosa_rugosa	Rorug01G0200700 Rorug07G0074000
rosa_samantha	Rh1AG218400 Rh1BG183800 Rh1CG202900 Rh1DG213600 Rh7AG201800 Rh7BG202000 Rh7CG213100 Rh7DG208800
rosa_wichuraiana	Rw1G018550 Rw7G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1035
AccB1I	GGYRCC	1 cut(s)	610
AccB7I	CCANNNNNTGG	1 cut(s)	148
AccI	GTMKAC	1 cut(s)	482
AccII	CGCG	5 cut(s)	258, 863, 880, 1247, 1392
AclWI	GGATC	2 cut(s)	192, 1866
AcsI	RAATTY	3 cut(s)	145, 152, 1256
AcuI	CTGAAG	2 cut(s)	656, 677
AfaI	GTAC	3 cut(s)	858, 1637, 1778
AfiI	CCNNNNNNNGG	7 cut(s)	57, 92, 148, 748, 749, 1802, 1878
AjiI	CACGTC	1 cut(s)	1813
AjnI	CCWGG	4 cut(s)	34, 1648, 1703, 1767
Alw21I	GWGCWC	1 cut(s)	1308
Alw26I	GTCTC	4 cut(s)	302, 322, 1501, 1816
AlwI	GGATC	2 cut(s)	192, 1866
Ama87I	CYCGRG	2 cut(s)	626, 1275
AoxI	GGCC	5 cut(s)	704, 945, 1573, 1672, 1770
ApoI	RAATTY	3 cut(s)	145, 152, 1256
Asp700I	GAANNNNTTC	1 cut(s)	1699
AspLEI	GCGC	7 cut(s)	258, 260, 865, 880, 1249, 1464, 1854
AspS9I	GGNCC	3 cut(s)	269, 587, 1521
AsuC2I	CCSGG	4 cut(s)	591, 627, 628, 743
AsuHPI	GGTGA	5 cut(s)	128, 540, 881, 1728, 1750
AsuII	TTCGAA	2 cut(s)	213, 1320
AvaI	CYCGRG	2 cut(s)	626, 1275
AvaII	GGWCC	3 cut(s)	269, 587, 1521
AxyI	CCTNAGG	1 cut(s)	56
BaeGI	GKGCMC	2 cut(s)	613, 1714
BanI	GGYRCC	1 cut(s)	610
BanII	GRGCYC	2 cut(s)	743, 1308
BarI	GAAGNNNNNNTAC	2 cut(s)	973, 1005
BbsI	GAAGAC	4 cut(s)	87, 378, 1233, 1821
Bbv12I	GWGCWC	1 cut(s)	1308
BbvCI	CCTCAGC	2 cut(s)	684, 1873
BccI	CCATC	4 cut(s)	59, 448, 1103, 1686
BceAI	ACGGC	1 cut(s)	1091
BcgI	CGANNNNNNTGC	2 cut(s)	1218, 1252
BciT130I	CCWGG	4 cut(s)	36, 1650, 1705, 1769
BciVI	GTATCC	1 cut(s)	191
BclI	TGATCA	2 cut(s)	130, 223
BcnI	CCSGG	4 cut(s)	591, 627, 628, 743
BcoDI	GTCTC	4 cut(s)	302, 322, 1501, 1816
BfaI	CTAG	2 cut(s)	978, 1299
BfmI	CTRYAG	2 cut(s)	110, 1619
BfuI	GTATCC	1 cut(s)	191
BlpI	GCTNAGC	1 cut(s)	651
BmcAI	AGTACT	1 cut(s)	1778
Bme1390I	CCNGG	8 cut(s)	36, 591, 627, 628, 743, 1650, 1705, 1769
Bme18I	GGWCC	3 cut(s)	269, 587, 1521
BmeT110I	CYCGRG	2 cut(s)	626, 1275
BmgBI	CACGTC	1 cut(s)	1813
BmgT120I	GGNCC	3 cut(s)	269, 587, 1521
BmiI	GGNNCC	4 cut(s)	589, 612, 1423, 1808
BmrFI	CCNGG	8 cut(s)	36, 591, 627, 628, 743, 1650, 1705, 1769
BmrI	ACTGGG	2 cut(s)	19, 593
BmsI	GCATC	4 cut(s)	706, 1217, 1582, 1603
BmuI	ACTGGG	2 cut(s)	19, 593
BpiI	GAAGAC	4 cut(s)	87, 378, 1233, 1821
BplI	GAGNNNNNCTC	2 cut(s)	1269, 1301
BpmI	CTGGAG	2 cut(s)	443, 1726
Bpu10I	CCTNAGC	2 cut(s)	684, 1873
Bpu1102I	GCTNAGC	1 cut(s)	651
Bpu14I	TTCGAA	2 cut(s)	213, 1320
BpuEI	CTTGAG	3 cut(s)	815, 1213, 1361
BpuMI	CCSGG	4 cut(s)	591, 627, 628, 743
BsaI	GGTCTC	1 cut(s)	322
BsaJI	CCNNGG	4 cut(s)	34, 626, 1107, 1767
BsaWI	WCCGGW	3 cut(s)	373, 853, 1795
BsaXI	ACNNNNNCTCC	2 cut(s)	1553, 1583
Bsc4I	CCNNNNNNNGG	7 cut(s)	57, 92, 148, 748, 749, 1802, 1878
Bse118I	RCCGGY	1 cut(s)	715
Bse1I	ACTGG	2 cut(s)	14, 599
Bse21I	CCTNAGG	1 cut(s)	56
Bse3DI	GCAATG	2 cut(s)	328, 1169
BseBI	CCWGG	4 cut(s)	36, 1650, 1705, 1769
BseDI	CCNNGG	4 cut(s)	34, 626, 1107, 1767
BseGI	GGATG	3 cut(s)	51, 181, 1095
BseLI	CCNNNNNNNGG	7 cut(s)	57, 92, 148, 748, 749, 1802, 1878
BseMI	GCAATG	2 cut(s)	328, 1169
BseMII	CTCAG	7 cut(s)	18, 326, 449, 468, 665, 698, 1887
BseNI	ACTGG	2 cut(s)	14, 599
BsePI	GCGCGC	1 cut(s)	256
BseRI	GAGGAG	1 cut(s)	440
BseSI	GKGCMC	2 cut(s)	613, 1714
BseYI	CCCAGC	1 cut(s)	493
BsgI	GTGCAG	1 cut(s)	1805
Bsh1236I	CGCG	5 cut(s)	258, 863, 880, 1247, 1392
BshFI	GGCC	5 cut(s)	706, 947, 1575, 1674, 1772
BshNI	GGYRCC	1 cut(s)	610
BsiHKAI	GWGCWC	1 cut(s)	1308
BsiHKCI	CYCGRG	2 cut(s)	626, 1275
BsiSI	CCGG	9 cut(s)	374, 390, 591, 627, 716, 743, 854, 1572, 1796
BslFI	GGGAC	2 cut(s)	16, 1750
BslI	CCNNNNNNNGG	7 cut(s)	57, 92, 148, 748, 749, 1802, 1878
BsmAI	GTCTC	4 cut(s)	302, 322, 1501, 1816
BsmFI	GGGAC	2 cut(s)	16, 1750
BsmI	GAATGC	1 cut(s)	1316
BsnI	GGCC	5 cut(s)	706, 947, 1575, 1674, 1772
Bso31I	GGTCTC	1 cut(s)	322
BsoBI	CYCGRG	2 cut(s)	626, 1275
Bsp119I	TTCGAA	2 cut(s)	213, 1320
Bsp1286I	GDGCHC	4 cut(s)	613, 743, 1308, 1714
Bsp143I	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
Bsp1720I	GCTNAGC	1 cut(s)	651
BspANI	GGCC	5 cut(s)	706, 947, 1575, 1674, 1772
BspCNI	CTCAG	7 cut(s)	19, 325, 448, 469, 664, 697, 1886
BspFNI	CGCG	5 cut(s)	258, 863, 880, 1247, 1392
BspLI	GGNNCC	4 cut(s)	589, 612, 1423, 1808
BspMAI	CTGCAG	2 cut(s)	114, 1623
BspPI	GGATC	2 cut(s)	192, 1866
BspT104I	TTCGAA	2 cut(s)	213, 1320
BspT107I	GGYRCC	1 cut(s)	610
BspTNI	GGTCTC	1 cut(s)	322
BsrDI	GCAATG	2 cut(s)	328, 1169
BsrFI	RCCGGY	1 cut(s)	715
BsrI	ACTGG	2 cut(s)	14, 599
BssAI	RCCGGY	1 cut(s)	715
BssECI	CCNNGG	4 cut(s)	34, 626, 1107, 1767
BssHII	GCGCGC	1 cut(s)	256
BssMI	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
Bst2UI	CCWGG	4 cut(s)	36, 1650, 1705, 1769
Bst4CI	ACNGT	2 cut(s)	1716, 1827
Bst6I	CTCTTC	2 cut(s)	991, 1814
BstBI	TTCGAA	2 cut(s)	213, 1320
BstC8I	GCNNGC	5 cut(s)	258, 801, 1160, 1577, 1847
BstDEI	CTNAG	8 cut(s)	27, 56, 312, 435, 477, 651, 684, 1873
BstDSI	CCRYGG	1 cut(s)	1107
BstEII	GGTNACC	1 cut(s)	593
BstF5I	GGATG	3 cut(s)	51, 181, 1095
BstFNI	CGCG	5 cut(s)	258, 863, 880, 1247, 1392
BstHHI	GCGC	7 cut(s)	258, 260, 865, 880, 1249, 1464, 1854
BstKTI	GATC	7 cut(s)	133, 187, 226, 840, 1458, 1519, 1861
BstMAI	GTCTC	4 cut(s)	302, 322, 1501, 1816
BstMBI	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
BstMWI	GCNNNNNNNGC	8 cut(s)	661, 667, 694, 703, 712, 790, 796, 1851
BstNI	CCWGG	4 cut(s)	36, 1650, 1705, 1769
BstNSI	RCATGY	1 cut(s)	397
BstPI	GGTNACC	1 cut(s)	593
BstSCI	CCNGG	8 cut(s)	34, 589, 625, 626, 741, 1648, 1703, 1767
BstSFI	CTRYAG	2 cut(s)	110, 1619
BstSLI	GKGCMC	2 cut(s)	613, 1714
BstUI	CGCG	5 cut(s)	258, 863, 880, 1247, 1392
BstV2I	GAAGAC	4 cut(s)	87, 378, 1233, 1821
BstX2I	RGATCY	1 cut(s)	1858
BstYI	RGATCY	1 cut(s)	1858
Bsu36I	CCTNAGG	1 cut(s)	56
BsuI	GTATCC	1 cut(s)	191
BsuRI	GGCC	5 cut(s)	706, 947, 1575, 1674, 1772
BtgI	CCRYGG	1 cut(s)	1107
BtrI	CACGTC	1 cut(s)	1813
BtsCI	GGATG	3 cut(s)	51, 181, 1095
BtsI	GCAGTG	3 cut(s)	1224, 1519, 1616
BtsIMutI	CAGTG	4 cut(s)	1224, 1519, 1616, 1712
Cac8I	GCNNGC	5 cut(s)	258, 801, 1160, 1577, 1847
CfoI	GCGC	7 cut(s)	258, 260, 865, 880, 1249, 1464, 1854
Cfr10I	RCCGGY	1 cut(s)	715
Cfr13I	GGNCC	3 cut(s)	269, 587, 1521
Cfr9I	CCCGGG	1 cut(s)	626
CpoI	CGGWCCG	1 cut(s)	1521
Csp6I	GTAC	3 cut(s)	857, 1636, 1777
CspCI	CAANNNNNGTGG	4 cut(s)	559, 594, 699, 734
CspI	CGGWCCG	1 cut(s)	1521
CviAII	CATG	6 cut(s)	394, 415, 1130, 1177, 1250, 1379
CviQI	GTAC	3 cut(s)	857, 1636, 1777
DdeI	CTNAG	8 cut(s)	27, 56, 312, 435, 477, 651, 684, 1873
DpnI	GATC	7 cut(s)	132, 186, 225, 839, 1457, 1518, 1860
DpnII	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
Eam1104I	CTCTTC	2 cut(s)	991, 1814
EarI	CTCTTC	2 cut(s)	991, 1814
EciI	GGCGGA	1 cut(s)	207
Ecl136II	GAGCTC	1 cut(s)	1306
Eco147I	AGGCCT	1 cut(s)	947
Eco24I	GRGCYC	2 cut(s)	743, 1308
Eco31I	GGTCTC	1 cut(s)	322
Eco47I	GGWCC	3 cut(s)	269, 587, 1521
Eco53kI	GAGCTC	1 cut(s)	1306
Eco57I	CTGAAG	2 cut(s)	656, 677
Eco81I	CCTNAGG	1 cut(s)	56
Eco88I	CYCGRG	2 cut(s)	626, 1275
Eco91I	GGTNACC	1 cut(s)	593
EcoICRI	GAGCTC	1 cut(s)	1306
EcoO65I	GGTNACC	1 cut(s)	593
EcoRI	GAATTC	1 cut(s)	152
EcoRII	CCWGG	4 cut(s)	34, 1648, 1703, 1767
EcoT38I	GRGCYC	2 cut(s)	743, 1308
FaeI	CATG	6 cut(s)	397, 418, 1133, 1180, 1253, 1382
FalI	AAGNNNNNCTT	8 cut(s)	913, 945, 932, 964, 1083, 1115, 1684, 1716
FaqI	GGGAC	2 cut(s)	16, 1750
FatI	CATG	6 cut(s)	393, 414, 1129, 1176, 1249, 1378
FauI	CCCGC	1 cut(s)	1151
FauNDI	CATATG	1 cut(s)	517
FbaI	TGATCA	2 cut(s)	130, 223
FblI	GTMKAC	1 cut(s)	482
FokI	GGATG	3 cut(s)	38, 188, 1082
FriOI	GRGCYC	2 cut(s)	743, 1308
FspBI	CTAG	2 cut(s)	978, 1299
GlaI	GCGC	7 cut(s)	257, 259, 864, 879, 1248, 1463, 1853
GsaI	CCCAGC	1 cut(s)	497
GsuI	CTGGAG	2 cut(s)	443, 1726
HaeIII	GGCC	5 cut(s)	706, 947, 1575, 1674, 1772
HapII	CCGG	9 cut(s)	374, 390, 591, 627, 716, 743, 854, 1572, 1796
HhaI	GCGC	7 cut(s)	258, 260, 865, 880, 1249, 1464, 1854
Hin1II	CATG	6 cut(s)	397, 418, 1133, 1180, 1253, 1382
Hin6I	GCGC	7 cut(s)	256, 258, 863, 878, 1247, 1462, 1852
HinP1I	GCGC	7 cut(s)	256, 258, 863, 878, 1247, 1462, 1852
HinfI	GANTC	8 cut(s)	29, 310, 479, 622, 1343, 1583, 1763, 1792
HpaII	CCGG	9 cut(s)	374, 390, 591, 627, 716, 743, 854, 1572, 1796
HphI	GGTGA	5 cut(s)	128, 540, 881, 1728, 1750
Hpy166II	GTNNAC	2 cut(s)	483, 1606
Hpy188III	TCNNGA	8 cut(s)	41, 173, 272, 422, 1021, 1277, 1414, 1816
Hpy8I	GTNNAC	2 cut(s)	483, 1606
Hpy99I	CGWCG	2 cut(s)	562, 1817
HpyAV	CCTTC	4 cut(s)	551, 701, 971, 1710
HpyCH4III	ACNGT	2 cut(s)	1716, 1827
HpyCH4IV	ACGT	1 cut(s)	1812
HpyF10VI	GCNNNNNNNGC	8 cut(s)	661, 667, 694, 703, 712, 790, 796, 1851
HpyF3I	CTNAG	8 cut(s)	27, 56, 312, 435, 477, 651, 684, 1873
HpySE526I	ACGT	1 cut(s)	1812
Hsp92II	CATG	6 cut(s)	397, 418, 1133, 1180, 1253, 1382
HspAI	GCGC	7 cut(s)	256, 258, 863, 878, 1247, 1462, 1852
Ksp22I	TGATCA	2 cut(s)	130, 223
Kzo9I	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
LmnI	GCTCC	3 cut(s)	963, 1427, 1647
LweI	GCATC	4 cut(s)	706, 1217, 1582, 1603
MaeI	CTAG	2 cut(s)	978, 1299
MaeII	ACGT	1 cut(s)	1812
MaeIII	GTNAC	6 cut(s)	71, 593, 980, 1085, 1433, 1666
MalI	GATC	7 cut(s)	132, 186, 225, 839, 1457, 1518, 1860
MboI	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
MfeI	CAATTG	3 cut(s)	524, 953, 1398
MflI	RGATCY	1 cut(s)	1858
MhlI	GDGCHC	4 cut(s)	613, 743, 1308, 1714
MlyI	GAGTC	6 cut(s)	38, 304, 488, 1352, 1772, 1786
MmeI	TCCRAC	1 cut(s)	1669
MroXI	GAANNNNTTC	1 cut(s)	1699
MseI	TTAA	5 cut(s)	279, 462, 1119, 1218, 1470
MspA1I	CMGCKG	3 cut(s)	204, 403, 1789
MspI	CCGG	9 cut(s)	374, 390, 591, 627, 716, 743, 854, 1572, 1796
MspR9I	CCNGG	8 cut(s)	36, 591, 627, 628, 743, 1650, 1705, 1769
MunI	CAATTG	3 cut(s)	524, 953, 1398
Mva1269I	GAATGC	1 cut(s)	1316
MvaI	CCWGG	4 cut(s)	36, 1650, 1705, 1769
MvnI	CGCG	5 cut(s)	258, 863, 880, 1247, 1392
MwoI	GCNNNNNNNGC	8 cut(s)	661, 667, 694, 703, 712, 790, 796, 1851
NciI	CCSGG	4 cut(s)	591, 627, 628, 743
NdeI	CATATG	1 cut(s)	517
NdeII	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
NlaIII	CATG	6 cut(s)	397, 418, 1133, 1180, 1253, 1382
NlaIV	GGNNCC	4 cut(s)	589, 612, 1423, 1808
NmeAIII	GCCGAG	1 cut(s)	1798
NmuCI	GTSAC	1 cut(s)	71
NspI	RCATGY	1 cut(s)	397
NspV	TTCGAA	2 cut(s)	213, 1320
PaeR7I	CTCGAG	1 cut(s)	1275
PauI	GCGCGC	1 cut(s)	256
PceI	AGGCCT	1 cut(s)	947
PctI	GAATGC	1 cut(s)	1316
PdmI	GAANNNNTTC	1 cut(s)	1699
PfeI	GAWTC	2 cut(s)	622, 1583
PflMI	CCANNNNNTGG	1 cut(s)	148
PfoI	TCCNGGA	1 cut(s)	1703
PleI	GAGTC	6 cut(s)	37, 304, 487, 1351, 1771, 1786
PpsI	GAGTC	6 cut(s)	37, 304, 487, 1351, 1771, 1786
PsiI	TTATAA	1 cut(s)	1035
Psp124BI	GAGCTC	1 cut(s)	1308
Psp6I	CCWGG	4 cut(s)	34, 1648, 1703, 1767
PspEI	GGTNACC	1 cut(s)	593
PspFI	CCCAGC	1 cut(s)	493
PspGI	CCWGG	4 cut(s)	34, 1648, 1703, 1767
PspN4I	GGNNCC	4 cut(s)	589, 612, 1423, 1808
PspPI	GGNCC	3 cut(s)	269, 587, 1521
PstI	CTGCAG	2 cut(s)	114, 1623
PsuI	RGATCY	1 cut(s)	1858
PteI	GCGCGC	1 cut(s)	256
RsaI	GTAC	3 cut(s)	858, 1637, 1778
RsaNI	GTAC	3 cut(s)	857, 1636, 1777
Rsr2I	CGGWCCG	1 cut(s)	1521
RsrII	CGGWCCG	1 cut(s)	1521
SacI	GAGCTC	1 cut(s)	1308
SaqAI	TTAA	5 cut(s)	279, 462, 1119, 1218, 1470
Sau3AI	GATC	7 cut(s)	130, 184, 223, 837, 1455, 1516, 1858
Sau96I	GGNCC	3 cut(s)	269, 587, 1521
ScaI	AGTACT	1 cut(s)	1778
SchI	GAGTC	6 cut(s)	38, 304, 488, 1352, 1772, 1786
ScrFI	CCNGG	8 cut(s)	36, 591, 627, 628, 743, 1650, 1705, 1769
SduI	GDGCHC	4 cut(s)	613, 743, 1308, 1714
SfaNI	GCATC	4 cut(s)	706, 1217, 1582, 1603
SfcI	CTRYAG	2 cut(s)	110, 1619
Sfr274I	CTCGAG	1 cut(s)	1275
SfuI	TTCGAA	2 cut(s)	213, 1320
SinI	GGWCC	3 cut(s)	269, 587, 1521
SlaI	CTCGAG	1 cut(s)	1275
SmaI	CCCGGG	1 cut(s)	628
SmlI	CTYRAG	4 cut(s)	794, 1192, 1275, 1340
SmoI	CTYRAG	4 cut(s)	794, 1192, 1275, 1340
SseBI	AGGCCT	1 cut(s)	947
SspMI	CTAG	2 cut(s)	978, 1299
SstI	GAGCTC	1 cut(s)	1308
StuI	AGGCCT	1 cut(s)	947
StyD4I	CCNGG	8 cut(s)	34, 589, 625, 626, 741, 1648, 1703, 1767
TaaI	ACNGT	2 cut(s)	1716, 1827
TaiI	ACGT	1 cut(s)	1815
TaqI	TCGA	8 cut(s)	78, 213, 560, 840, 1276, 1320, 1430, 1815
TaqII	GACCGA	1 cut(s)	1538
TatI	WGTACW	1 cut(s)	1776
TauI	GCSGC	6 cut(s)	207, 210, 406, 790, 883, 1677
TfiI	GAWTC	2 cut(s)	622, 1583
Tru1I	TTAA	5 cut(s)	279, 462, 1119, 1218, 1470
Tru9I	TTAA	5 cut(s)	279, 462, 1119, 1218, 1470
TscAI	CASTG	4 cut(s)	1231, 1519, 1623, 1719
TseFI	GTSAC	1 cut(s)	71
Tsp45I	GTSAC	1 cut(s)	71
TspDTI	ATGAA	5 cut(s)	782, 1118, 1165, 1269, 1367
TspGWI	ACGGA	1 cut(s)	546
TspMI	CCCGGG	1 cut(s)	626
TspRI	CASTG	4 cut(s)	1231, 1519, 1623, 1719
Van91I	CCANNNNNTGG	1 cut(s)	148
VpaK11BI	GGWCC	3 cut(s)	269, 587, 1521
XapI	RAATTY	3 cut(s)	145, 152, 1256
XceI	RCATGY	1 cut(s)	397
XhoI	CTCGAG	1 cut(s)	1275
XmaI	CCCGGG	1 cut(s)	626
XmiI	GTMKAC	1 cut(s)	482
XmnI	GAANNNNTTC	1 cut(s)	1699
XspI	CTAG	2 cut(s)	978, 1299
ZrmI	AGTACT	1 cut(s)	1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.