Rw7G017640

Scarecrow-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0002481
Physical Location & Seq
Forward (+)
18643402 .. 18646292
2891 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G017640.1

Sequence Viewer

Length: 2352 bp
ATGCCCTTTCAATTTCAGCAACAGGGGAAGGGGGTCTTAGAAATTACAGCGGCATCAATCTGTGACTGGAACCACAAGAAAGAGGAGGAGCTTTTCTTCAACAACAGCTTCGTCAGCAACGAACCCACCTCTGTTCTTCATATGAGAAGAAGCCCGAGCCCACCCACTTCGGCATCCACTCTCTCCTCCTCCTTCAACGGCGGCGGCAACGGCAACACCACCACGCCGCTTCTGCAGGACACTTCGCCGGTGGGACCCGAGCCCGACACGGCGGCGGCGCGCAGTAGCAGCAAGGATGAGTGGACCTGCGAGCTTCAGTCGATTCCCAGCGGCGGTCTGGAGGCCGTGACCGGATCGGGCGGCGGGAGATGCGGCGGGCTTGGGATGGAGGACTGGGAGACCATGCTGTCCGAAACGGCGGCGTCTCCGGGTCAAGACCAGTCGCTGATCCGGTGGATCTCGGGCGACGTGGACGACGCGTCGTTTGGGCTAAAGCAGCTGTTGCAGAGCGGGAACAACAGCAACTCTCTTGAGTTTGACGGCAATGCGGGTCTGGGAATGGTCGATCAGGGTTCCGGTTTCGACCACATCGGGAGCAGCGTTTCGGGCCCCAATTTGGGGTTCTCCGGCGGTTCTGGTTTCAATGGGAAAATGGGTTTTGTGCCCAGCTCTTCTGGGCCGCTGAATTACAAGGTTTCAAATGTTGGGTTGATGAACAATAATGGCGGCAACAACAACAACAACAATTTCGCCAATTCAGCACTTCCAGTTTCGCTGCCTCATGGAATGGTTTATCAGAATCACCAGCAGTTTGAGAACCCAGATGAGAAGCCTCAGATTCTGAACCCACAGATGTTCATGAACCAGCACCAGTCTCAGCTCCCTCATCAAAATCCAAACTTTTTCATGCCAGTGACTTATGCTCAGCAGGAGCAGCACTTTCTTCAGTCCCAGCCCAAGCGCCACAACCCAGGTGGCGGCGGTGGAGGACTGGACCCGAGTTCGCAGATCCACCAAAAGGTACAATATTCTGATCCGGGTCATGAGTTTCTGCTCAGAAAGCAACACCTTCAGCAGCAGCAGCAGCAGCAGCAGCCCCATTTTGGTAATTTCCCTCCCGGAATGCAGTTCCTTCCTCAGCAGCACCACACTCAACCGAGGCCGGTAGTGGTGCCCAAGCAGAAGGTGGGTGGCGAAGAAATGGCGGCGGCGGCGGCTCACCAGAACCAGCAGCAACTGCTGCAGCATAGTTTGCTGGACCAGCTCTATAAGGCCGCAGAAATGGTAGGTACTGGGAACTTCTCACACGCGCAGGCGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTGTTGGAAAGCCCCTTCAGCGGGCTGCTTTCTATTTCAAGGAGGCTTTGCAACTCCTCCTCCTTATGAACAACCCAGCAACCTCTCCTCCACCAAGAACCCCGACCCCTTTTGATGTCATCTTCAAAATGGGGGCTTACAAAGTCTTCTCTGAAGTGTCTCCATTGATTCAGTTTGTCAATTTTACTTGCAACCAGGCTTTACTTGAGGCTGTATCAGAAGCTGATCAGATTCACATTGTTGATTTTGATATTGGGTTTGGTGCTCACTGGGCCTCCTTTATGCAGGAGCTCCCATTGAGAAACAGGGGTGGCGCTTCCCCCTCTCTCAAAATCACTGCTTTTGCCTCTCCTTCTACTCATCACACAGTTGAGCTTAATCTTATGCGTGATAATTTAACCCAATTTGCTGATGAGATTGGCTTAGGTTTTGAGCTTGAAGTAGTTAACATTGATTTGTTGGACCAAAACTCATACTCACTGCCCTTTTTCCGAGCTAATGATAATGAGGCAGTTGCTGTGAATTTCCCCATTTGGTCTAGTTCGAATCAACCGGCTGCTTTGCCCAATCTCCTTCGATTTGTTAAACTGCTCTCTCCCAAAATTGTGGTGTCTTTGGATAGAGGGTGTGACAGGAGTGACCTTCCATTCCCACAGCACATTCGGCAGGCCCTCCAATCCTACATAAACCTCTTGGAATCTCTTGATGCGGTTAATGTAACTTCGGATGCTGTGAACAAGATTGAGAGGTTCCTCCTTCAGCCTAAGATTGAAAGCACTGTTTTGGGGCGTCTCCGAACCCCTGACAAAATGCCCCTATGGAAAACGCTCTTTGCCTCAGCTGGTTTCACTCCATTATCCTTCAGTAACTTCACGGAGACTCAGGCAGAATGTGTGGTCAAGAGGAGTACAGCAAGAGGGTTTCATGTCGAGAAGCGTCAAGAGTCACTTGTGCTATGCTGGCAGCGCCGAGAGCTCATCTCAGCTTCAGCTTGGAGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

783

Amino Acids

85.9

Weight (kDa)

5.92

Isoelectric Point (pI)

56.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 419 - 781 2.3e-92 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 406
Acc36I ACCTGC 1 cut(s) 314
AccB1I GGYRCC 1 cut(s) 1171
AccBSI CCGCTC 1 cut(s) 510
AccII CGCG 4 cut(s) 280, 479, 1310, 1327
AclWI GGATC 5 cut(s) 361, 442, 464, 1003, 1028
AcsI RAATTY 1 cut(s) 1870
AcuI CTGAAG 8 cut(s) 299, 929, 1055, 1349, 1521, 2090, 2194, 2319
AcyI GRCGYC 2 cut(s) 422, 2137
AfaI GTAC 3 cut(s) 1023, 1291, 2257
AfiI CCNNNNNNNGG 9 cut(s) 332, 616, 617, 618, 977, 1018, 1103, 1368, 1369
AflIII ACRYGT 1 cut(s) 477
AgsI TTSAA 9 cut(s) 11, 100, 196, 643, 699, 1387, 1474, 1787, 2120
AhdI GACNNNNNGTC 1 cut(s) 478
AjiI CACGTC 1 cut(s) 469
AjnI CCWGG 2 cut(s) 970, 1542
AjuI GAANNNNNNNTTGG 2 cut(s) 605, 637
Alw21I GWGCWC 3 cut(s) 1615, 1641, 2325
Alw26I GTCTC 6 cut(s) 392, 429, 879, 1512, 2144, 2219
AlwI GGATC 5 cut(s) 361, 442, 464, 1003, 1028
AlwNI CAGNNNCTG 5 cut(s) 445, 841, 1237, 1571, 1865
Ama87I CYCGRG 4 cut(s) 154, 257, 460, 997
AoxI GGCC 7 cut(s) 342, 607, 677, 1160, 1272, 1620, 2016
ApaI GGGCCC 1 cut(s) 611
ApoI RAATTY 1 cut(s) 1870
ArsI GACNNNNNNTTYG 2 cut(s) 467, 499
AspLEI GCGC 7 cut(s) 280, 282, 963, 1312, 1327, 1664, 2316
AsuC2I CCSGG 3 cut(s) 429, 1038, 1119
AsuHPI GGTGA 3 cut(s) 794, 1211, 1328
AsuII TTCGAA 1 cut(s) 1892
AvaI CYCGRG 4 cut(s) 154, 257, 460, 997
AvaII GGWCC 5 cut(s) 254, 303, 994, 1258, 1810
BaeGI GKGCMC 3 cut(s) 611, 666, 1176
BanI GGYRCC 1 cut(s) 1171
BanII GRGCYC 5 cut(s) 161, 264, 611, 1641, 2325
BbsI GAAGAC 1 cut(s) 1486
Bbv12I GWGCWC 3 cut(s) 1615, 1641, 2325
BbvCI CCTCAGC 2 cut(s) 1137, 2185
BccI CCATC 1 cut(s) 379
BceAI ACGGC 6 cut(s) 214, 226, 285, 329, 432, 556
BciT130I CCWGG 2 cut(s) 972, 1544
BclI TGATCA 1 cut(s) 1573
BcnI CCSGG 3 cut(s) 429, 1038, 1119
BcoDI GTCTC 6 cut(s) 392, 429, 879, 1512, 2144, 2219
BfaI CTAG 1 cut(s) 1887
BfmI CTRYAG 2 cut(s) 233, 1241
BfoI RGCGCY 3 cut(s) 964, 1665, 2317
BfuAI ACCTGC 1 cut(s) 314
BlpI GCTNAGC 1 cut(s) 924
Bme1390I CCNGG 5 cut(s) 429, 972, 1038, 1119, 1544
Bme18I GGWCC 5 cut(s) 254, 303, 994, 1258, 1810
BmeRI GACNNNNNGTC 1 cut(s) 478
BmeT110I CYCGRG 4 cut(s) 154, 257, 460, 997
BmgBI CACGTC 1 cut(s) 469
BmiI GGNNCC 9 cut(s) 71, 255, 256, 574, 609, 610, 996, 1173, 2099
BmrFI CCNGG 5 cut(s) 429, 972, 1038, 1119, 1544
BmrI ACTGGG 3 cut(s) 403, 1302, 1627
BmsI GCATC 5 cut(s) 62, 182, 359, 2044, 2065
BmuI ACTGGG 3 cut(s) 403, 1302, 1627
BpiI GAAGAC 1 cut(s) 1486
BplI GAGNNNNNCTC 2 cut(s) 2312, 2344
BpmI CTGGAG 1 cut(s) 359
Bpu10I CCTNAGC 3 cut(s) 1137, 1771, 2185
Bpu1102I GCTNAGC 1 cut(s) 924
Bpu14I TTCGAA 1 cut(s) 1892
BpuEI CTTGAG 2 cut(s) 551, 1574
BpuMI CCSGG 3 cut(s) 429, 1038, 1119
BsaHI GRCGYC 2 cut(s) 422, 2137
BsaI GGTCTC 1 cut(s) 392
BsaJI CCNNGG 2 cut(s) 970, 1157
BsaWI WCCGGW 3 cut(s) 350, 450, 575
BsaXI ACNNNNNCTCC 8 cut(s) 1328, 1358, 1392, 1420, 1422, 1450, 1607, 1637
Bsc4I CCNNNNNNNGG 9 cut(s) 332, 616, 617, 618, 977, 1018, 1103, 1368, 1369
Bse118I RCCGGY 3 cut(s) 247, 1162, 1900
Bse1I ACTGG 9 cut(s) 71, 398, 439, 767, 871, 911, 996, 1297, 1622
Bse3DI GCAATG 1 cut(s) 550
BseBI CCWGG 2 cut(s) 972, 1544
BseDI CCNNGG 2 cut(s) 970, 1157
BseGI GGATG 4 cut(s) 173, 301, 390, 2080
BseLI CCNNNNNNNGG 9 cut(s) 332, 616, 617, 618, 977, 1018, 1103, 1368, 1369
BseMI GCAATG 1 cut(s) 550
BseMII CTCAG 8 cut(s) 848, 890, 938, 1069, 1151, 2199, 2243, 2343
BseNI ACTGG 9 cut(s) 71, 398, 439, 767, 871, 911, 996, 1297, 1622
BsePI GCGCGC 1 cut(s) 278
BseRI GAGGAG 8 cut(s) 98, 101, 175, 178, 1394, 1397, 1425, 2266
BseSI GKGCMC 3 cut(s) 611, 666, 1176
BseYI CCCAGC 4 cut(s) 326, 665, 951, 1423
Bsh1236I CGCG 4 cut(s) 280, 479, 1310, 1327
BshFI GGCC 7 cut(s) 344, 609, 679, 1162, 1274, 1622, 2018
BshNI GGYRCC 1 cut(s) 1171
BsiHKAI GWGCWC 3 cut(s) 1615, 1641, 2325
BsiHKCI CYCGRG 4 cut(s) 154, 257, 460, 997
BslFI GGGAC 2 cut(s) 267, 934
BslI CCNNNNNNNGG 9 cut(s) 332, 616, 617, 618, 977, 1018, 1103, 1368, 1369
BsmAI GTCTC 6 cut(s) 392, 429, 879, 1512, 2144, 2219
BsmBI CGTCTC 2 cut(s) 429, 2144
BsmFI GGGAC 2 cut(s) 267, 934
BsmI GAATGC 1 cut(s) 1128
BsnI GGCC 7 cut(s) 344, 609, 679, 1162, 1274, 1622, 2018
Bso31I GGTCTC 1 cut(s) 392
BsoBI CYCGRG 4 cut(s) 154, 257, 460, 997
Bsp119I TTCGAA 1 cut(s) 1892
Bsp120I GGGCCC 1 cut(s) 607
Bsp1286I GDGCHC 8 cut(s) 161, 264, 611, 666, 1176, 1615, 1641, 2325
Bsp143I GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
Bsp1720I GCTNAGC 1 cut(s) 924
BspANI GGCC 7 cut(s) 344, 609, 679, 1162, 1274, 1622, 2018
BspCNI CTCAG 8 cut(s) 847, 889, 937, 1068, 1150, 2198, 2242, 2342
BspFNI CGCG 4 cut(s) 280, 479, 1310, 1327
BspHI TCATGA 2 cut(s) 858, 1042
BspLI GGNNCC 9 cut(s) 71, 255, 256, 574, 609, 610, 996, 1173, 2099
BspMAI CTGCAG 2 cut(s) 237, 1245
BspMI ACCTGC 1 cut(s) 314
BspPI GGATC 5 cut(s) 361, 442, 464, 1003, 1028
BspQI GCTCTTC 1 cut(s) 676
BspT104I TTCGAA 1 cut(s) 1892
BspT107I GGYRCC 1 cut(s) 1171
BspTNI GGTCTC 1 cut(s) 392
BsrBI CCGCTC 1 cut(s) 510
BsrDI GCAATG 1 cut(s) 550
BsrFI RCCGGY 3 cut(s) 247, 1162, 1900
BsrI ACTGG 9 cut(s) 71, 398, 439, 767, 871, 911, 996, 1297, 1622
BssAI RCCGGY 3 cut(s) 247, 1162, 1900
BssECI CCNNGG 2 cut(s) 970, 1157
BssHII GCGCGC 1 cut(s) 278
BssMI GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
BssNI GRCGYC 2 cut(s) 422, 2137
Bst2UI CCWGG 2 cut(s) 972, 1544
Bst4CI ACNGT 2 cut(s) 1717, 2128
Bst6I CTCTTC 1 cut(s) 676
BstACI GRCGYC 2 cut(s) 422, 2137
BstAPI GCANNNNNTGC 4 cut(s) 502, 1237, 1240, 1252
BstBI TTCGAA 1 cut(s) 1892
BstC8I GCNNGC 7 cut(s) 280, 311, 377, 1314, 1371, 2016, 2309
BstF5I GGATG 4 cut(s) 173, 301, 390, 2080
BstFNI CGCG 4 cut(s) 280, 479, 1310, 1327
BstH2I RGCGCY 3 cut(s) 964, 1665, 2317
BstHHI GCGC 7 cut(s) 280, 282, 963, 1312, 1327, 1664, 2316
BstKTI GATC 7 cut(s) 356, 450, 459, 568, 1011, 1036, 1576
BstMAI GTCTC 6 cut(s) 392, 429, 879, 1512, 2144, 2219
BstMBI GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
BstNI CCWGG 2 cut(s) 972, 1544
BstSCI CCNGG 5 cut(s) 427, 970, 1036, 1117, 1542
BstSFI CTRYAG 2 cut(s) 233, 1241
BstSLI GKGCMC 3 cut(s) 611, 666, 1176
BstUI CGCG 4 cut(s) 280, 479, 1310, 1327
BstV2I GAAGAC 1 cut(s) 1486
BstX2I RGATCY 2 cut(s) 456, 1008
BstXI CCANNNNNNTGG 1 cut(s) 1954
BstYI RGATCY 2 cut(s) 456, 1008
BsuRI GGCC 7 cut(s) 344, 609, 679, 1162, 1274, 1622, 2018
BtrI CACGTC 1 cut(s) 469
BtsCI GGATG 4 cut(s) 173, 301, 390, 2080
BtsI GCAGTG 2 cut(s) 1683, 1826
BtsIMutI CAGTG 5 cut(s) 918, 1615, 1683, 1826, 2124
BveI ACCTGC 1 cut(s) 314
Cac8I GCNNGC 7 cut(s) 280, 311, 377, 1314, 1371, 2016, 2309
CaiI CAGNNNCTG 5 cut(s) 445, 841, 1237, 1571, 1865
CciI TCATGA 2 cut(s) 858, 1042
CfoI GCGC 7 cut(s) 280, 282, 963, 1312, 1327, 1664, 2316
Cfr10I RCCGGY 3 cut(s) 247, 1162, 1900
CseI GACGC 5 cut(s) 411, 468, 485, 2126, 2273
Csp6I GTAC 3 cut(s) 1022, 1290, 2256
CspCI CAANNNNNGTGG 2 cut(s) 955, 990
CviAII CATG 6 cut(s) 403, 782, 859, 907, 1043, 2273
CviQI GTAC 3 cut(s) 1022, 1290, 2256
DpnI GATC 7 cut(s) 355, 449, 458, 567, 1010, 1035, 1575
DpnII GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
DrdI GACNNNNNNGTC 1 cut(s) 406
DriI GACNNNNNGTC 1 cut(s) 478
DseDI GACNNNNNNGTC 1 cut(s) 406
Eam1104I CTCTTC 1 cut(s) 676
Eam1105I GACNNNNNGTC 1 cut(s) 478
EarI CTCTTC 1 cut(s) 676
Ecl136II GAGCTC 2 cut(s) 1639, 2323
Eco24I GRGCYC 5 cut(s) 161, 264, 611, 1641, 2325
Eco31I GGTCTC 1 cut(s) 392
Eco47I GGWCC 5 cut(s) 254, 303, 994, 1258, 1810
Eco53kI GAGCTC 2 cut(s) 1639, 2323
Eco57I CTGAAG 8 cut(s) 299, 929, 1055, 1349, 1521, 2090, 2194, 2319
Eco88I CYCGRG 4 cut(s) 154, 257, 460, 997
EcoICRI GAGCTC 2 cut(s) 1639, 2323
EcoO109I RGGNCCY 3 cut(s) 254, 608, 2017
EcoRII CCWGG 2 cut(s) 970, 1542
EcoT38I GRGCYC 5 cut(s) 161, 264, 611, 1641, 2325
Esp3I CGTCTC 2 cut(s) 429, 2144
FaeI CATG 6 cut(s) 406, 785, 862, 910, 1046, 2276
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 2280, 2312
FaqI GGGAC 2 cut(s) 267, 934
FatI CATG 6 cut(s) 402, 781, 858, 906, 1042, 2272
FauI CCCGC 5 cut(s) 356, 368, 503, 541, 1362
FauNDI CATATG 1 cut(s) 141
FbaI TGATCA 1 cut(s) 1573
FokI GGATG 4 cut(s) 160, 308, 397, 2087
FriOI GRGCYC 5 cut(s) 161, 264, 611, 1641, 2325
FspBI CTAG 1 cut(s) 1887
GlaI GCGC 7 cut(s) 279, 281, 962, 1311, 1326, 1663, 2315
GsaI CCCAGC 4 cut(s) 330, 669, 955, 1427
GsuI CTGGAG 1 cut(s) 359
HaeII RGCGCY 3 cut(s) 964, 1665, 2317
HaeIII GGCC 7 cut(s) 344, 609, 679, 1162, 1274, 1622, 2018
HgaI GACGC 5 cut(s) 411, 468, 485, 2126, 2273
HhaI GCGC 7 cut(s) 280, 282, 963, 1312, 1327, 1664, 2316
Hin1I GRCGYC 2 cut(s) 422, 2137
Hin1II CATG 6 cut(s) 406, 785, 862, 910, 1046, 2276
Hin6I GCGC 7 cut(s) 278, 280, 961, 1310, 1325, 1662, 2314
HinP1I GCGC 7 cut(s) 278, 280, 961, 1310, 1325, 1662, 2314
HincII GTYRAC 1 cut(s) 1795
HindII GTYRAC 1 cut(s) 1795
HinfI GANTC 9 cut(s) 322, 799, 838, 1516, 1579, 1894, 2045, 2227, 2291
HpaI GTTAAC 1 cut(s) 1795
HphI GGTGA 3 cut(s) 794, 1211, 1328
Hpy166II GTNNAC 4 cut(s) 303, 472, 1795, 2083
Hpy8I GTNNAC 4 cut(s) 303, 472, 1795, 2083
Hpy99I CGWCG 3 cut(s) 470, 479, 484
HpyCH4III ACNGT 2 cut(s) 1717, 2128
HpyCH4IV ACGT 1 cut(s) 468
HpyCH4V TGCA 7 cut(s) 235, 505, 1126, 1243, 1399, 1539, 1633
HpySE526I ACGT 1 cut(s) 468
Hsp92I GRCGYC 2 cut(s) 422, 2137
Hsp92II CATG 6 cut(s) 406, 785, 862, 910, 1046, 2276
HspAI GCGC 7 cut(s) 278, 280, 961, 1310, 1325, 1662, 2314
KflI GGGWCCC 1 cut(s) 254
Ksp22I TGATCA 1 cut(s) 1573
KspAI GTTAAC 1 cut(s) 1795
Kzo9I GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
LguI GCTCTTC 1 cut(s) 676
LmnI GCTCC 6 cut(s) 88, 594, 885, 931, 1636, 1644
LweI GCATC 5 cut(s) 62, 182, 359, 2044, 2065
MaeI CTAG 1 cut(s) 1887
MaeII ACGT 1 cut(s) 468
MaeIII GTNAC 8 cut(s) 62, 346, 913, 1976, 1985, 2065, 2213, 2292
MalI GATC 7 cut(s) 355, 449, 458, 567, 1010, 1035, 1575
MbiI CCGCTC 1 cut(s) 510
MboI GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
MboII GAAGA 8 cut(s) 88, 128, 159, 663, 935, 1208, 1462, 1486
MflI RGATCY 2 cut(s) 456, 1008
MhlI GDGCHC 8 cut(s) 161, 264, 611, 666, 1176, 1615, 1641, 2325
MluI ACGCGT 1 cut(s) 477
MlyI GAGTC 2 cut(s) 2221, 2300
MmeI TCCRAC 2 cut(s) 1333, 1788
MseI TTAA 5 cut(s) 1725, 1745, 1794, 1932, 2061
MslI CAYNNNNRTG 1 cut(s) 911
MspA1I CMGCKG 6 cut(s) 50, 330, 499, 682, 1369, 2189
MspR9I CCNGG 5 cut(s) 429, 972, 1038, 1119, 1544
Mva1269I GAATGC 1 cut(s) 1128
MvaI CCWGG 2 cut(s) 972, 1544
MvnI CGCG 4 cut(s) 280, 479, 1310, 1327
NciI CCSGG 3 cut(s) 429, 1038, 1119
NdeI CATATG 1 cut(s) 141
NdeII GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
NlaIII CATG 6 cut(s) 406, 785, 862, 910, 1046, 2276
NlaIV GGNNCC 9 cut(s) 71, 255, 256, 574, 609, 610, 996, 1173, 2099
NmeAIII GCCGAG 1 cut(s) 2342
NmuCI GTSAC 6 cut(s) 62, 346, 913, 1976, 1985, 2292
NspV TTCGAA 1 cut(s) 1892
PagI TCATGA 2 cut(s) 858, 1042
PauI GCGCGC 1 cut(s) 278
PciSI GCTCTTC 1 cut(s) 676
PcsI WCGNNNNNNNCGW 2 cut(s) 117, 597
PctI GAATGC 1 cut(s) 1128
PfeI GAWTC 7 cut(s) 322, 799, 838, 1516, 1579, 1894, 2045
PfoI TCCNGGA 1 cut(s) 1117
PleI GAGTC 2 cut(s) 2221, 2299
PpsI GAGTC 2 cut(s) 2221, 2299
PpuMI RGGWCCY 1 cut(s) 254
Psp124BI GAGCTC 2 cut(s) 1641, 2325
Psp5II RGGWCCY 1 cut(s) 254
Psp6I CCWGG 2 cut(s) 970, 1542
PspFI CCCAGC 4 cut(s) 326, 665, 951, 1423
PspGI CCWGG 2 cut(s) 970, 1542
PspN4I GGNNCC 9 cut(s) 71, 255, 256, 574, 609, 610, 996, 1173, 2099
PspOMI GGGCCC 1 cut(s) 607
PspPPI RGGWCCY 1 cut(s) 254
PstI CTGCAG 2 cut(s) 237, 1245
PstNI CAGNNNCTG 5 cut(s) 445, 841, 1237, 1571, 1865
PsuI RGATCY 2 cut(s) 456, 1008
PteI GCGCGC 1 cut(s) 278
PvuII CAGCTG 2 cut(s) 499, 2189
RsaI GTAC 3 cut(s) 1023, 1291, 2257
RsaNI GTAC 3 cut(s) 1022, 1290, 2256
RseI CAYNNNNRTG 1 cut(s) 911
SacI GAGCTC 2 cut(s) 1641, 2325
SapI GCTCTTC 1 cut(s) 676
SaqAI TTAA 5 cut(s) 1725, 1745, 1794, 1932, 2061
Sau3AI GATC 7 cut(s) 353, 447, 456, 565, 1008, 1033, 1573
SchI GAGTC 2 cut(s) 2221, 2300
ScrFI CCNGG 5 cut(s) 429, 972, 1038, 1119, 1544
SduI GDGCHC 8 cut(s) 161, 264, 611, 666, 1176, 1615, 1641, 2325
SfaNI GCATC 5 cut(s) 62, 182, 359, 2044, 2065
SfcI CTRYAG 2 cut(s) 233, 1241
SfuI TTCGAA 1 cut(s) 1892
SgrAI CRCCGGYG 1 cut(s) 247
SinI GGWCC 5 cut(s) 254, 303, 994, 1258, 1810
SmiMI CAYNNNNRTG 1 cut(s) 911
SmlI CTYRAG 2 cut(s) 530, 1553
SmoI CTYRAG 2 cut(s) 530, 1553
SspI AATATT 1 cut(s) 1028
SspMI CTAG 1 cut(s) 1887
SstI GAGCTC 2 cut(s) 1641, 2325
StyD4I CCNGG 5 cut(s) 427, 970, 1036, 1117, 1542
TaaI ACNGT 2 cut(s) 1717, 2128
TaiI ACGT 1 cut(s) 471
TaqI TCGA 6 cut(s) 320, 564, 582, 1892, 1924, 2277
TatI WGTACW 1 cut(s) 2255
TfiI GAWTC 7 cut(s) 322, 799, 838, 1516, 1579, 1894, 2045
Tru1I TTAA 5 cut(s) 1725, 1745, 1794, 1932, 2061
Tru9I TTAA 5 cut(s) 1725, 1745, 1794, 1932, 2061
TscAI CASTG 5 cut(s) 918, 1622, 1690, 1833, 2131
TseFI GTSAC 6 cut(s) 62, 346, 913, 1976, 1985, 2292
Tsp45I GTSAC 6 cut(s) 62, 346, 913, 1976, 1985, 2292
TspDTI ATGAA 7 cut(s) 128, 728, 847, 875, 895, 1430, 2261
TspGWI ACGGA 1 cut(s) 2237
TspRI CASTG 5 cut(s) 918, 1622, 1690, 1833, 2131
VpaK11BI GGWCC 5 cut(s) 254, 303, 994, 1258, 1810
XapI RAATTY 1 cut(s) 1870
XcmI CCANNNNNNNNNTGG 3 cut(s) 334, 971, 1183
XspI CTAG 1 cut(s) 1887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.