RLG00000003564

Scarecrow-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0002481
Physical Location & Seq
Reverse (-)
50048901 .. 50052082
3182 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003564

Sequence Viewer

Length: 2472 bp
ATGGGCTATAATGTAAAATTAATATCTGGGGTTGAAGGGAGAGAAGGGTACCCCTACAGCGAGCCCTACACTTATAGCAAAAAGCAGAGCGCCCATTTTACCTCAAGGAGAGGGATGCCCTTTCAATTTCAGCAACAGGGGAAGGGGGTCTTAGAAATTACAGCGGCATCAATCTGTGACTGGAACCACAAGAAAGACGAGGAGCTTTTCATCAACAACAGCTTCGTCAGCAACGAACCCACCTCTGTTCTTCATATGAGAAGAAGCCCGAGCCCACCCACGTCGGCATCCACTCTCTCCTCCTCCTTCAACGGCGGCGGCAACGGCAACGGCAACACCACCACGCCGCTTCTGCAGGACACTTCGCCGGTGGGACCCGAGCCCGACACGGCGGCGGCGCGCAGCAACAGCAAGGATGAGTGGACCTGCGAGCTTCAGTCGATTCCCAGCGGCGGACTGGAGGCCGTGACCGGATCGGGCGGCGGGCGATGCGGCGGGCTTGGGTTGGAGGACTGGGAGACCATGCTGTCCGAAACGGCGGCGTCTCCGGGTCAAGACCAGTCGCTGCTCCGGTGGATCTCGGGCGACGTGGACGACGCGTCGTTTGGGCTAAAGCAGCTGTTGCAGAGCGGGAACAACAGTAACTCTCTGGAGTTTGACGGCAATGCGGGTCTGGGAATGGTCGATCAGGGTTCCGGTTTCGACCACATCGGGAGCAGCGTTTCGGGTCCCAATTTGGGGTTCTCCGGCGGTTCTGGTTTCAATGGGAAAATGGGTTTTGTGCCCAGCTCTTCTGGGCCGCTGAATTACAAGGTTTCAAATGTTGGGTTGATGAACAATAATGGCGGCAACAACAACAACAACAACTCCAATTTCGCCAATTCAGCACTTCCAGTTTCGCTGCCTCATGGAATGGTTTATCAGAATCACCAGCAGTTTGAGAACCCAGATGAGAAGCCTCAGATTCTGAACCCACAGCTGTTCATGAACCAGCACCAGTCTCAGCTCCCTCATCAAAATCCAAACTTTTTCATGCCAGTGACTTATGCTCAGCAGGAGCAGCACTTTCTTCAGTCCCAGCCCAAGCGCCACAACCCAGGTGGCGGCGGTGGAGGACTGGACCCGAGTTCTCAGATCCACCAAAAGGTACAATATTCTGATCCGGGTCATGAGTTTCTGCTCAGAAAGCAACACCTTCAGCAGCAGCAGCAGCCCCATTTTGGTAATTTCCCTCCCGGAATGCAGTTTCTTCCTCAGCAGCACCACACTCAACCGAGGCCGGTAGTGGTGCCCAAGCAGAAGGTGGGTGGCGAAGAAATGGCGGCGGCGGCGGCGGCTCACCAGAACCAGCAGCAGCAACTGCTACAGCATAGTTTGCTGGACCAGCTCTATAAGGCCGCAGAAATGGTAGGTACTGGGAACTTCTCACACGCGCAGGCGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTGTTGGAAAGCCCCTTCAGCGGGCTGCTTTCTATTTCAAGGAGGCTTTGCAACTCCTCCTTATGAACAACCCAGCAACCTCTCCTCCACCAAGAACCCCGACCCCTTTTGATGTCATCTTCAAAATGGGGGCTTACAAAGTCTTCTCTGAAGTGTCTCCATTGATTCAGTTTGTCAATTTTACCTGCAACCAGGCTCTACTTGAGGCTGTATCAGAAGCTGAACATATTCACATTGTTGATTTTGATATTGGGTTTGGTGCTCACTGGGCCTCCTTTATGCAGGAGCTCCCATTGAGGAACAGGGGTGGCACTTCCCCCTCTCTCAAAATCACAGCGTTTGCCTCTCCTTCTACTCATCACGCAGTTGAGCTTAATCTTATGCGTGATAATTTAACCCAATTTGCTGATGAGATTGGCTTAGGTTTTGAGCTTGAAGTAGTTAACATTGATTTGTTGGACCAAAACTCATACTCACTGCCCTTTTTCCGAGCTAATGATAATGAGGCAGTTGCTGTGAATTTCCCCATTTGGTCTAGTTCGAATCAACCGGCTGCTTTGCCCAATCTCCTTCGATTTGTTAAACAGCTCTCTCCCAAAATTGTGGTGTCTTTGGATAGAGGGTGTGACAGGAGTGACCTTCCATTCGCACAGCACATTCTGCAGGCCCTCCAATCCTACATAAACCTCTTGGAATCTCTTGATGCGGTTAATGTAACTTCGGATGCTGTGAACAAGATTGAGAGGTTCCTCCTTCAGCCTAAGATTGAAAGCACTGTTTTGGGGCGTCTCCGAACCCCTGACAAAATGCCCCTATGGAAAACGCTCTTTGCCTCAGCTGGTTTCACTCCATTATCCTTCAGTAACTTCACGGAGACTCAGGCAGAATGTGTGGTCAAGAGGAGTACAGCAAGAGGGTTTCATGTCGAGAAGCGTCAAGAGTCACTTGTGCTATGCTGGCAGCGCCGAGAGCTCATCTCAGCTTCAGCTTGGAGGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

824

Amino Acids

90.28

Weight (kDa)

6.14

Isoelectric Point (pI)

54.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 460 - 822 5e-94 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 526
Acc36I ACCTGC 2 cut(s) 434, 1664
Acc65I GGTACC 1 cut(s) 48
AccB1I GGYRCC 2 cut(s) 48, 1288
AccBSI CCGCTC 1 cut(s) 630
AccII CGCG 4 cut(s) 400, 599, 1433, 1450
AclWI GGATC 4 cut(s) 481, 584, 1129, 1154
AcsI RAATTY 1 cut(s) 1990
AcuI CTGAAG 8 cut(s) 419, 1055, 1181, 1472, 1641, 2210, 2314, 2439
AcyI GRCGYC 2 cut(s) 542, 2257
AfaI GTAC 4 cut(s) 50, 1149, 1414, 2377
AfiI CCNNNNNNNGG 8 cut(s) 452, 737, 738, 1103, 1144, 1220, 1491, 1492
AflIII ACRYGT 1 cut(s) 597
AgsI TTSAA 9 cut(s) 35, 125, 310, 763, 819, 1510, 1594, 1907, 2240
AhdI GACNNNNNGTC 1 cut(s) 598
AjiI CACGTC 2 cut(s) 282, 589
AjnI CCWGG 2 cut(s) 1096, 1662
AjuI GAANNNNNNNTTGG 2 cut(s) 725, 757
Alw21I GWGCWC 3 cut(s) 1735, 1761, 2445
Alw26I GTCTC 6 cut(s) 512, 549, 1005, 1632, 2264, 2339
AlwI GGATC 4 cut(s) 481, 584, 1129, 1154
AlwNI CAGNNNCTG 5 cut(s) 565, 967, 1360, 1691, 1985
Ama87I CYCGRG 4 cut(s) 268, 377, 580, 1123
AoxI GGCC 6 cut(s) 462, 797, 1277, 1395, 1740, 2136
ApoI RAATTY 1 cut(s) 1990
ArsI GACNNNNNNTTYG 4 cut(s) 587, 619, 2099, 2131
AseI ATTAAT 1 cut(s) 20
Asp700I GAANNNNTTC 1 cut(s) 1698
Asp718I GGTACC 1 cut(s) 48
AspLEI GCGC 7 cut(s) 92, 400, 402, 1089, 1435, 1450, 2436
AspS9I GGNCC 9 cut(s) 374, 423, 728, 797, 1120, 1381, 1740, 1930, 2137
AsuC2I CCSGG 3 cut(s) 549, 1164, 1236
AsuHPI GGTGA 3 cut(s) 920, 1331, 1451
AsuII TTCGAA 1 cut(s) 2012
AvaI CYCGRG 4 cut(s) 268, 377, 580, 1123
AvaII GGWCC 6 cut(s) 374, 423, 728, 1120, 1381, 1930
BaeGI GKGCMC 2 cut(s) 786, 1293
BanI GGYRCC 2 cut(s) 48, 1288
BanII GRGCYC 5 cut(s) 66, 275, 384, 1761, 2445
BbsI GAAGAC 1 cut(s) 1606
Bbv12I GWGCWC 3 cut(s) 1735, 1761, 2445
BbvCI CCTCAGC 2 cut(s) 1254, 2305
BceAI ACGGC 7 cut(s) 328, 340, 346, 405, 449, 552, 676
BciT130I CCWGG 2 cut(s) 1098, 1664
BcnI CCSGG 3 cut(s) 549, 1164, 1236
BcoDI GTCTC 6 cut(s) 512, 549, 1005, 1632, 2264, 2339
BfaI CTAG 1 cut(s) 2007
BfmI CTRYAG 4 cut(s) 55, 353, 1364, 2132
BfoI RGCGCY 3 cut(s) 93, 1090, 2437
BfuAI ACCTGC 2 cut(s) 434, 1664
BlpI GCTNAGC 1 cut(s) 1050
Bme1390I CCNGG 5 cut(s) 549, 1098, 1164, 1236, 1664
Bme18I GGWCC 6 cut(s) 374, 423, 728, 1120, 1381, 1930
BmeRI GACNNNNNGTC 1 cut(s) 598
BmeT110I CYCGRG 4 cut(s) 268, 377, 580, 1123
BmgBI CACGTC 2 cut(s) 282, 589
BmgT120I GGNCC 9 cut(s) 374, 423, 728, 797, 1120, 1381, 1740, 1930, 2137
BmrFI CCNGG 5 cut(s) 549, 1098, 1164, 1236, 1664
BmrI ACTGGG 3 cut(s) 523, 1425, 1747
BmsI GCATC 6 cut(s) 105, 176, 296, 479, 2164, 2185
BmuI ACTGGG 3 cut(s) 523, 1425, 1747
BpiI GAAGAC 1 cut(s) 1606
BplI GAGNNNNNCTC 2 cut(s) 2432, 2464
BpmI CTGGAG 2 cut(s) 479, 671
Bpu10I CCTNAGC 3 cut(s) 1254, 1891, 2305
Bpu1102I GCTNAGC 1 cut(s) 1050
Bpu14I TTCGAA 1 cut(s) 2012
BpuEI CTTGAG 2 cut(s) 88, 1694
BpuMI CCSGG 3 cut(s) 549, 1164, 1236
BsaHI GRCGYC 2 cut(s) 542, 2257
BsaI GGTCTC 1 cut(s) 512
BsaJI CCNNGG 2 cut(s) 1096, 1274
BsaWI WCCGGW 3 cut(s) 470, 570, 695
BsaXI ACNNNNNCTCC 8 cut(s) 851, 881, 1451, 1481, 1540, 1570, 1727, 1757
Bsc4I CCNNNNNNNGG 8 cut(s) 452, 737, 738, 1103, 1144, 1220, 1491, 1492
Bse118I RCCGGY 3 cut(s) 367, 1279, 2020
Bse3DI GCAATG 1 cut(s) 670
BseBI CCWGG 2 cut(s) 1098, 1664
BseDI CCNNGG 2 cut(s) 1096, 1274
BseGI GGATG 4 cut(s) 120, 287, 421, 2200
BseLI CCNNNNNNNGG 8 cut(s) 452, 737, 738, 1103, 1144, 1220, 1491, 1492
BseMI GCAATG 1 cut(s) 670
BseMII CTCAG 9 cut(s) 974, 1016, 1064, 1145, 1195, 1268, 2319, 2363, 2463
BsePI GCGCGC 1 cut(s) 398
BseRI GAGGAG 6 cut(s) 215, 289, 292, 1517, 1545, 2386
BseSI GKGCMC 2 cut(s) 786, 1293
BseYI CCCAGC 4 cut(s) 446, 785, 1077, 1543
Bsh1236I CGCG 4 cut(s) 400, 599, 1433, 1450
BshFI GGCC 6 cut(s) 464, 799, 1279, 1397, 1742, 2138
BshNI GGYRCC 2 cut(s) 48, 1288
BsiHKAI GWGCWC 3 cut(s) 1735, 1761, 2445
BsiHKCI CYCGRG 4 cut(s) 268, 377, 580, 1123
BslFI GGGAC 3 cut(s) 387, 714, 1060
BslI CCNNNNNNNGG 8 cut(s) 452, 737, 738, 1103, 1144, 1220, 1491, 1492
BsmAI GTCTC 6 cut(s) 512, 549, 1005, 1632, 2264, 2339
BsmBI CGTCTC 2 cut(s) 549, 2264
BsmFI GGGAC 3 cut(s) 387, 714, 1060
BsmI GAATGC 1 cut(s) 1245
BsnI GGCC 6 cut(s) 464, 799, 1279, 1397, 1742, 2138
Bso31I GGTCTC 1 cut(s) 512
BsoBI CYCGRG 4 cut(s) 268, 377, 580, 1123
Bsp119I TTCGAA 1 cut(s) 2012
Bsp1286I GDGCHC 8 cut(s) 66, 275, 384, 786, 1293, 1735, 1761, 2445
Bsp143I GATC 5 cut(s) 473, 576, 685, 1134, 1159
Bsp1720I GCTNAGC 1 cut(s) 1050
BspANI GGCC 6 cut(s) 464, 799, 1279, 1397, 1742, 2138
BspCNI CTCAG 9 cut(s) 973, 1015, 1063, 1144, 1194, 1267, 2318, 2362, 2462
BspFNI CGCG 4 cut(s) 400, 599, 1433, 1450
BspHI TCATGA 2 cut(s) 984, 1168
BspMAI CTGCAG 2 cut(s) 357, 2136
BspMI ACCTGC 2 cut(s) 434, 1664
BspPI GGATC 4 cut(s) 481, 584, 1129, 1154
BspQI GCTCTTC 1 cut(s) 796
BspT104I TTCGAA 1 cut(s) 2012
BspT107I GGYRCC 2 cut(s) 48, 1288
BspTNI GGTCTC 1 cut(s) 512
BsrBI CCGCTC 1 cut(s) 630
BsrDI GCAATG 1 cut(s) 670
BsrFI RCCGGY 3 cut(s) 367, 1279, 2020
BssAI RCCGGY 3 cut(s) 367, 1279, 2020
BssECI CCNNGG 2 cut(s) 1096, 1274
BssHII GCGCGC 1 cut(s) 398
BssMI GATC 5 cut(s) 473, 576, 685, 1134, 1159
BssNI GRCGYC 2 cut(s) 542, 2257
Bst2UI CCWGG 2 cut(s) 1098, 1664
Bst4CI ACNGT 2 cut(s) 641, 2248
Bst6I CTCTTC 1 cut(s) 796
BstACI GRCGYC 2 cut(s) 542, 2257
BstAPI GCANNNNNTGC 4 cut(s) 622, 1360, 1375, 2131
BstBI TTCGAA 1 cut(s) 2012
BstC8I GCNNGC 9 cut(s) 62, 400, 431, 485, 497, 1437, 1494, 2136, 2429
BstF5I GGATG 4 cut(s) 120, 287, 421, 2200
BstFNI CGCG 4 cut(s) 400, 599, 1433, 1450
BstH2I RGCGCY 3 cut(s) 93, 1090, 2437
BstHHI GCGC 7 cut(s) 92, 400, 402, 1089, 1435, 1450, 2436
BstKTI GATC 5 cut(s) 476, 579, 688, 1137, 1162
BstMAI GTCTC 6 cut(s) 512, 549, 1005, 1632, 2264, 2339
BstMBI GATC 5 cut(s) 473, 576, 685, 1134, 1159
BstNI CCWGG 2 cut(s) 1098, 1664
BstSCI CCNGG 5 cut(s) 547, 1096, 1162, 1234, 1662
BstSFI CTRYAG 4 cut(s) 55, 353, 1364, 2132
BstSLI GKGCMC 2 cut(s) 786, 1293
BstUI CGCG 4 cut(s) 400, 599, 1433, 1450
BstV2I GAAGAC 1 cut(s) 1606
BstX2I RGATCY 2 cut(s) 576, 1134
BstXI CCANNNNNNTGG 1 cut(s) 2074
BstYI RGATCY 2 cut(s) 576, 1134
BsuRI GGCC 6 cut(s) 464, 799, 1279, 1397, 1742, 2138
BtgZI GCGATG 1 cut(s) 502
BtrI CACGTC 2 cut(s) 282, 589
BtsCI GGATG 4 cut(s) 120, 287, 421, 2200
BtsI GCAGTG 1 cut(s) 1946
BtsIMutI CAGTG 4 cut(s) 1044, 1735, 1946, 2244
BveI ACCTGC 2 cut(s) 434, 1664
Cac8I GCNNGC 9 cut(s) 62, 400, 431, 485, 497, 1437, 1494, 2136, 2429
CaiI CAGNNNCTG 5 cut(s) 565, 967, 1360, 1691, 1985
CciI TCATGA 2 cut(s) 984, 1168
CfoI GCGC 7 cut(s) 92, 400, 402, 1089, 1435, 1450, 2436
Cfr10I RCCGGY 3 cut(s) 367, 1279, 2020
Cfr13I GGNCC 9 cut(s) 374, 423, 728, 797, 1120, 1381, 1740, 1930, 2137
CseI GACGC 5 cut(s) 531, 588, 605, 2246, 2393
Csp6I GTAC 4 cut(s) 49, 1148, 1413, 2376
CspCI CAANNNNNGTGG 2 cut(s) 1081, 1116
CviAII CATG 6 cut(s) 523, 908, 985, 1033, 1169, 2393
CviQI GTAC 4 cut(s) 49, 1148, 1413, 2376
DpnI GATC 5 cut(s) 475, 578, 687, 1136, 1161
DpnII GATC 5 cut(s) 473, 576, 685, 1134, 1159
DrdI GACNNNNNNGTC 1 cut(s) 526
DriI GACNNNNNGTC 1 cut(s) 598
DseDI GACNNNNNNGTC 1 cut(s) 526
Eam1104I CTCTTC 1 cut(s) 796
Eam1105I GACNNNNNGTC 1 cut(s) 598
EarI CTCTTC 1 cut(s) 796
EciI GGCGGA 1 cut(s) 468
Ecl136II GAGCTC 2 cut(s) 1759, 2443
Eco24I GRGCYC 5 cut(s) 66, 275, 384, 1761, 2445
Eco31I GGTCTC 1 cut(s) 512
Eco47I GGWCC 6 cut(s) 374, 423, 728, 1120, 1381, 1930
Eco53kI GAGCTC 2 cut(s) 1759, 2443
Eco57I CTGAAG 8 cut(s) 419, 1055, 1181, 1472, 1641, 2210, 2314, 2439
Eco88I CYCGRG 4 cut(s) 268, 377, 580, 1123
EcoICRI GAGCTC 2 cut(s) 1759, 2443
EcoO109I RGGNCCY 3 cut(s) 374, 728, 2137
EcoRII CCWGG 2 cut(s) 1096, 1662
EcoT38I GRGCYC 5 cut(s) 66, 275, 384, 1761, 2445
Esp3I CGTCTC 2 cut(s) 549, 2264
FaeI CATG 6 cut(s) 526, 911, 988, 1036, 1172, 2396
FalI AAGNNNNNCTT 4 cut(s) 134, 166, 2400, 2432
FaqI GGGAC 3 cut(s) 387, 714, 1060
FatI CATG 6 cut(s) 522, 907, 984, 1032, 1168, 2392
FauI CCCGC 5 cut(s) 476, 488, 623, 661, 1485
FauNDI CATATG 1 cut(s) 255
FokI GGATG 4 cut(s) 127, 274, 428, 2207
FriOI GRGCYC 5 cut(s) 66, 275, 384, 1761, 2445
FspBI CTAG 1 cut(s) 2007
GlaI GCGC 7 cut(s) 91, 399, 401, 1088, 1434, 1449, 2435
GsaI CCCAGC 4 cut(s) 450, 789, 1081, 1547
GsuI CTGGAG 2 cut(s) 479, 671
HaeII RGCGCY 3 cut(s) 93, 1090, 2437
HaeIII GGCC 6 cut(s) 464, 799, 1279, 1397, 1742, 2138
HgaI GACGC 5 cut(s) 531, 588, 605, 2246, 2393
HhaI GCGC 7 cut(s) 92, 400, 402, 1089, 1435, 1450, 2436
Hin1I GRCGYC 2 cut(s) 542, 2257
Hin1II CATG 6 cut(s) 526, 911, 988, 1036, 1172, 2396
Hin6I GCGC 7 cut(s) 90, 398, 400, 1087, 1433, 1448, 2434
HinP1I GCGC 7 cut(s) 90, 398, 400, 1087, 1433, 1448, 2434
HincII GTYRAC 1 cut(s) 1915
HindII GTYRAC 1 cut(s) 1915
HinfI GANTC 8 cut(s) 442, 925, 964, 1636, 2014, 2165, 2347, 2411
HpaI GTTAAC 1 cut(s) 1915
HphI GGTGA 3 cut(s) 920, 1331, 1451
Hpy166II GTNNAC 4 cut(s) 423, 592, 1915, 2203
Hpy188III TCNNGA 9 cut(s) 554, 650, 712, 985, 1169, 2171, 2368, 2398, 2408
Hpy8I GTNNAC 4 cut(s) 423, 592, 1915, 2203
Hpy99I CGWCG 4 cut(s) 286, 590, 599, 604
HpyCH4III ACNGT 2 cut(s) 641, 2248
HpyCH4IV ACGT 2 cut(s) 281, 588
HpyCH4V TGCA 7 cut(s) 355, 625, 1243, 1522, 1659, 1753, 2134
HpySE526I ACGT 2 cut(s) 281, 588
Hsp92I GRCGYC 2 cut(s) 542, 2257
Hsp92II CATG 6 cut(s) 526, 911, 988, 1036, 1172, 2396
HspAI GCGC 7 cut(s) 90, 398, 400, 1087, 1433, 1448, 2434
KflI GGGWCCC 2 cut(s) 374, 728
KpnI GGTACC 1 cut(s) 52
KspAI GTTAAC 1 cut(s) 1915
Kzo9I GATC 5 cut(s) 473, 576, 685, 1134, 1159
LguI GCTCTTC 1 cut(s) 796
LmnI GCTCC 7 cut(s) 202, 573, 714, 1011, 1057, 1756, 1764
LweI GCATC 6 cut(s) 105, 176, 296, 479, 2164, 2185
MaeI CTAG 1 cut(s) 2007
MaeII ACGT 2 cut(s) 281, 588
MaeIII GTNAC 9 cut(s) 176, 466, 641, 1039, 2096, 2105, 2185, 2333, 2412
MalI GATC 5 cut(s) 475, 578, 687, 1136, 1161
MbiI CCGCTC 1 cut(s) 630
MboI GATC 5 cut(s) 473, 576, 685, 1134, 1159
MboII GAAGA 8 cut(s) 242, 273, 783, 1061, 1241, 1325, 1582, 1606
MflI RGATCY 2 cut(s) 576, 1134
MhlI GDGCHC 8 cut(s) 66, 275, 384, 786, 1293, 1735, 1761, 2445
MluI ACGCGT 1 cut(s) 597
MlyI GAGTC 2 cut(s) 2341, 2420
MmeI TCCRAC 3 cut(s) 486, 1456, 1908
MroXI GAANNNNTTC 1 cut(s) 1698
MseI TTAA 6 cut(s) 20, 1845, 1865, 1914, 2052, 2181
MslI CAYNNNNRTG 1 cut(s) 1037
MspA1I CMGCKG 7 cut(s) 164, 450, 619, 802, 979, 1492, 2309
MspR9I CCNGG 5 cut(s) 549, 1098, 1164, 1236, 1664
Mva1269I GAATGC 1 cut(s) 1245
MvaI CCWGG 2 cut(s) 1098, 1664
MvnI CGCG 4 cut(s) 400, 599, 1433, 1450
NciI CCSGG 3 cut(s) 549, 1164, 1236
NdeI CATATG 1 cut(s) 255
NdeII GATC 5 cut(s) 473, 576, 685, 1134, 1159
NlaIII CATG 6 cut(s) 526, 911, 988, 1036, 1172, 2396
NmeAIII GCCGAG 1 cut(s) 2462
NmuCI GTSAC 6 cut(s) 176, 466, 1039, 2096, 2105, 2412
NspV TTCGAA 1 cut(s) 2012
PagI TCATGA 2 cut(s) 984, 1168
PauI GCGCGC 1 cut(s) 398
PciSI GCTCTTC 1 cut(s) 796
PcsI WCGNNNNNNNCGW 2 cut(s) 231, 717
PctI GAATGC 1 cut(s) 1245
PdmI GAANNNNTTC 1 cut(s) 1698
PfeI GAWTC 6 cut(s) 442, 925, 964, 1636, 2014, 2165
PfoI TCCNGGA 1 cut(s) 1234
PleI GAGTC 2 cut(s) 2341, 2419
PpsI GAGTC 2 cut(s) 2341, 2419
PpuMI RGGWCCY 2 cut(s) 374, 728
PshBI ATTAAT 1 cut(s) 20
Psp124BI GAGCTC 2 cut(s) 1761, 2445
Psp5II RGGWCCY 2 cut(s) 374, 728
Psp6I CCWGG 2 cut(s) 1096, 1662
PspFI CCCAGC 4 cut(s) 446, 785, 1077, 1543
PspGI CCWGG 2 cut(s) 1096, 1662
PspPI GGNCC 9 cut(s) 374, 423, 728, 797, 1120, 1381, 1740, 1930, 2137
PspPPI RGGWCCY 2 cut(s) 374, 728
PstI CTGCAG 2 cut(s) 357, 2136
PstNI CAGNNNCTG 5 cut(s) 565, 967, 1360, 1691, 1985
PsuI RGATCY 2 cut(s) 576, 1134
PteI GCGCGC 1 cut(s) 398
PvuII CAGCTG 3 cut(s) 619, 979, 2309
RsaI GTAC 4 cut(s) 50, 1149, 1414, 2377
RsaNI GTAC 4 cut(s) 49, 1148, 1413, 2376
RseI CAYNNNNRTG 1 cut(s) 1037
SacI GAGCTC 2 cut(s) 1761, 2445
SapI GCTCTTC 1 cut(s) 796
SaqAI TTAA 6 cut(s) 20, 1845, 1865, 1914, 2052, 2181
Sau3AI GATC 5 cut(s) 473, 576, 685, 1134, 1159
Sau96I GGNCC 9 cut(s) 374, 423, 728, 797, 1120, 1381, 1740, 1930, 2137
SchI GAGTC 2 cut(s) 2341, 2420
ScrFI CCNGG 5 cut(s) 549, 1098, 1164, 1236, 1664
SduI GDGCHC 8 cut(s) 66, 275, 384, 786, 1293, 1735, 1761, 2445
SfaNI GCATC 6 cut(s) 105, 176, 296, 479, 2164, 2185
SfcI CTRYAG 4 cut(s) 55, 353, 1364, 2132
SfuI TTCGAA 1 cut(s) 2012
SgrAI CRCCGGYG 1 cut(s) 367
SinI GGWCC 6 cut(s) 374, 423, 728, 1120, 1381, 1930
SmiMI CAYNNNNRTG 1 cut(s) 1037
SmlI CTYRAG 2 cut(s) 103, 1673
SmoI CTYRAG 2 cut(s) 103, 1673
SspI AATATT 1 cut(s) 1154
SspMI CTAG 1 cut(s) 2007
SstI GAGCTC 2 cut(s) 1761, 2445
StyD4I CCNGG 5 cut(s) 547, 1096, 1162, 1234, 1662
TaaI ACNGT 2 cut(s) 641, 2248
TaiI ACGT 2 cut(s) 284, 591
TaqI TCGA 6 cut(s) 440, 684, 702, 2012, 2044, 2397
TatI WGTACW 1 cut(s) 2375
TfiI GAWTC 6 cut(s) 442, 925, 964, 1636, 2014, 2165
Tru1I TTAA 6 cut(s) 20, 1845, 1865, 1914, 2052, 2181
Tru9I TTAA 6 cut(s) 20, 1845, 1865, 1914, 2052, 2181
TscAI CASTG 4 cut(s) 1044, 1742, 1953, 2251
TseFI GTSAC 6 cut(s) 176, 466, 1039, 2096, 2105, 2412
Tsp45I GTSAC 6 cut(s) 176, 466, 1039, 2096, 2105, 2412
TspDTI ATGAA 8 cut(s) 199, 242, 848, 973, 1001, 1021, 1550, 2381
TspGWI ACGGA 1 cut(s) 2357
TspRI CASTG 4 cut(s) 1044, 1742, 1953, 2251
VpaK11BI GGWCC 6 cut(s) 374, 423, 728, 1120, 1381, 1930
VspI ATTAAT 1 cut(s) 20
XapI RAATTY 1 cut(s) 1990
XcmI CCANNNNNNNNNTGG 3 cut(s) 454, 1097, 1300
XmnI GAANNNNTTC 1 cut(s) 1698
XspI CTAG 1 cut(s) 2007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.