Rh7DG208800

Scarecrow-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0002481
Physical Location & Seq
Forward (+)
19929943 .. 19933443
3501 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG208800.1

Sequence Viewer

Length: 2337 bp
ATGCCCTTTCAATTTCAGCAACAGGGGAAGGGGGTCTTAGAAATTACAGCGGCATCAATCTGTGACTGGAACCACAAGAAAGACGAGGAGCTTTTCTTCAACAACAGCTTCGTCAGCAACGAACCCACCTCTGTTCTTCATATGAGAAGGAGCCCGAGCCCACCCACTTCGGCATCCACTCTCTCCTCCTCCTTCAACGGCGGCGGCAACGGCAACGGCACCACGCCGCTTCTGCAGGACACTTCGCCGGTGGGACCCGAGCCCGACACGGCGGCGGCGCGCAGCAGCAGCAAGGATGAGTGGACCTGCGAGCTTCAGTCGATTCCCAGCGGCGGTCTGGAGGCCGTGACCGGATCGGGCGGCGGGAGATGCGGCGGGCTTGGGTTGGAGGACTGGGAGACCGTGCTGTCCGAAACGGCGGCGTCTCCGGGTCAAGACCAGTCGCTGCTCCGGTGGATCTCGGGCGACGTGGACGACGCGTCGTTTGGGCTAAAGCAGCTGTTGCAGAGCGGGAACAACAGCAACTGTCTTGAGTTTGACGGCAATGCGGGTCTGGGAATGGTCGATCAGGGTTCCGGTTTCGACCACATCGGGAGCAGCGTTTCGGGTCCCAATTTGGGGTTCTCCGGCGGTTCTGGTTTCAATGGGAAAATGGGTTTTGTGCCCAGCTCTTCTGCGCCGCTGAATTACAAGGTTTCAAATGTTGGGTTGATGAACAATAATGGCGGCAACAACAACAACTTCGCCAATTCAGCACTTCCAGTTTCGCTGCCTCATGGAATGGTTTATCAGAATCACCAGCAGTTTGAGAACCCAGATGAGAAGCCTCAGATTCTGAACCCACAGATGTTCATGAACCAGCACCAGTCTCAGCTCCCTCATCAAAATCCAAACTTTTTCATGCCAGTGACTTATGCTCAGCAGGAGCAGCACTTTCTTCAGTCCCAGCCCAAGCGCCACAACCCAGGTGGCGGCGGTGGAGGACTGGACCCGAGTTCTCAGATCCACCAAAAGGTACAATATTCTGATCCGGGTCATGAGTTTCTGCTCAGAAAGCAACACCTTCAGCAGCAGCAGCAGCAGCCCCATTTTGGTAATTTCCCTCCCGGAATGCAGTTCCTTCCTCAGCAGCACCACACTCAACCGAGGCCGGTAGTGGTGCCCAAGCAGAAGGTGGGTGGCGAAGAAATGGCGGCGGCGGCTCACCAGAACCAGCAGCAACTGCTGCAGCATAGTTTGCTGGACCAGCTCTATAAGGCCGCAGAAATGGTAGGTACTGGGAACTTCTCACACGCGCAGGCGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTGTTGGAAAGCCCCTTCAGCGGGCTGCTTTCTATTTCAAGGAGGCTTTGCAACTCCTCCTCCTTATGAACAACCCAGCAACCTCTCCTCCACCAAGAACCCCGACCCCTTTTGATGTCATCTTCAAAATGGGGGCTTACAAAGTCTTCTCTGAAGTGTCTCCATTGATTCAGTTTGTCAATTTTACTTGCAACCAGGCTCTACTTGAGGCTGTATCAGAAGCTGATCAGATTCACATTGTTGATTTTGATATTGGGTTTGGTGCTCACTGGGCCTCCTTTATGCAGGAGCTCCCATTGAGGAACAGGGGTGGCGCTTCCCCCTCTCTCAAAATCACTGCTTTTGCCTCCCCTTCTACTCATCACACAGTTGAGCTTAATCTTATGCGTGATAATTTAACCCAATTTGCTGATGAGATTGGCTTAGGTTTTGAGCTTGAAGTAGTTAACATTGATTTGTTGGACCAAAACTCATACTCGCTGCCCTTTTTCCGAGCCAATGATAATGAGGCCATTGCTGTGAATTTCCCCATTTGGTCTAGTTCGAATCAACCGGCTGCTTTGCCCAATCTCCTTCAATTTGTTAAACAGCTCTCTCCCAAAATTGTGGTGTCTTTGGATAGAGGGTGTGACAGGAGTGACCTTCCATTCCCACAGCACATTCGGCAGGCCCTCCAATCCTACATAAACCTCTTGGAATCTCTTGATGCGGTTAATGTAACTTCGGATGCTGTGAACAAGATTGAGAGGTTCCTCCTTCAGCCTAAGATTGAAAGCACTGTTTTGGGGCGTCTCCGAACCCCTGACAAAATGCCCCTATGGAAAACGCTCTTTGCCTCAGCTGGTTTTACTCCATTATCCTTCAGTAACTTCACGGAGACTCAGGCAGAATGTGTGGTCAAGAGGAGTACAGCAAGAGGGTTTCATGTCGAGAAGCGTCAAGAGTCACTTGTGCTATGCTGGCAGCGCCGAGAGCTCATCTCAGCTTCAGCTTGGAGGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

778

Amino Acids

85.33

Weight (kDa)

5.92

Isoelectric Point (pI)

56.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 414 - 777 2.7e-93 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 406
Acc36I ACCTGC 1 cut(s) 314
AccB1I GGYRCC 2 cut(s) 218, 1159
AccBSI CCGCTC 1 cut(s) 510
AccII CGCG 4 cut(s) 280, 479, 1295, 1312
AclWI GGATC 4 cut(s) 361, 464, 997, 1022
AcsI RAATTY 1 cut(s) 1855
AcuI CTGAAG 8 cut(s) 299, 923, 1049, 1334, 1506, 2075, 2179, 2304
AcyI GRCGYC 2 cut(s) 422, 2122
AfaI GTAC 3 cut(s) 1017, 1276, 2242
AfiI CCNNNNNNNGG 8 cut(s) 332, 617, 618, 971, 1012, 1091, 1353, 1354
AflIII ACRYGT 1 cut(s) 477
AhdI GACNNNNNGTC 1 cut(s) 478
AjiI CACGTC 1 cut(s) 469
AjnI CCWGG 2 cut(s) 964, 1527
AjuI GAANNNNNNNTTGG 2 cut(s) 605, 637
Alw21I GWGCWC 3 cut(s) 1600, 1626, 2310
Alw26I GTCTC 6 cut(s) 392, 429, 873, 1497, 2129, 2204
AlwI GGATC 4 cut(s) 361, 464, 997, 1022
AlwNI CAGNNNCTG 5 cut(s) 445, 525, 835, 1222, 1556
Ama87I CYCGRG 4 cut(s) 154, 257, 460, 991
AoxI GGCC 6 cut(s) 342, 1148, 1257, 1605, 1842, 2001
ApoI RAATTY 1 cut(s) 1855
ArsI GACNNNNNNTTYG 2 cut(s) 467, 499
AspLEI GCGC 8 cut(s) 280, 282, 679, 957, 1297, 1312, 1649, 2301
AspS9I GGNCC 8 cut(s) 254, 303, 608, 988, 1243, 1605, 1795, 2002
AsuC2I CCSGG 3 cut(s) 429, 1032, 1107
AsuHPI GGTGA 3 cut(s) 788, 1196, 1313
AsuII TTCGAA 1 cut(s) 1877
AvaI CYCGRG 4 cut(s) 154, 257, 460, 991
AvaII GGWCC 6 cut(s) 254, 303, 608, 988, 1243, 1795
BaeGI GKGCMC 2 cut(s) 666, 1164
BanI GGYRCC 2 cut(s) 218, 1159
BanII GRGCYC 5 cut(s) 155, 161, 264, 1626, 2310
BbsI GAAGAC 1 cut(s) 1471
Bbv12I GWGCWC 3 cut(s) 1600, 1626, 2310
BbvCI CCTCAGC 2 cut(s) 1125, 2170
BceAI ACGGC 7 cut(s) 214, 226, 232, 285, 329, 432, 556
BciT130I CCWGG 2 cut(s) 966, 1529
BclI TGATCA 1 cut(s) 1558
BcnI CCSGG 3 cut(s) 429, 1032, 1107
BcoDI GTCTC 6 cut(s) 392, 429, 873, 1497, 2129, 2204
BfaI CTAG 1 cut(s) 1872
BfmI CTRYAG 2 cut(s) 233, 1226
BfoI RGCGCY 3 cut(s) 958, 1650, 2302
BfuAI ACCTGC 1 cut(s) 314
BlpI GCTNAGC 1 cut(s) 918
Bme1390I CCNGG 5 cut(s) 429, 966, 1032, 1107, 1529
Bme18I GGWCC 6 cut(s) 254, 303, 608, 988, 1243, 1795
BmeRI GACNNNNNGTC 1 cut(s) 478
BmeT110I CYCGRG 4 cut(s) 154, 257, 460, 991
BmgBI CACGTC 1 cut(s) 469
BmgT120I GGNCC 8 cut(s) 254, 303, 608, 988, 1243, 1605, 1795, 2002
BmrFI CCNGG 5 cut(s) 429, 966, 1032, 1107, 1529
BmrI ACTGGG 3 cut(s) 403, 1287, 1612
BmsI GCATC 5 cut(s) 62, 182, 359, 2029, 2050
BmuI ACTGGG 3 cut(s) 403, 1287, 1612
BpiI GAAGAC 1 cut(s) 1471
BplI GAGNNNNNCTC 2 cut(s) 2297, 2329
BpmI CTGGAG 1 cut(s) 359
Bpu10I CCTNAGC 3 cut(s) 1125, 1756, 2170
Bpu1102I GCTNAGC 1 cut(s) 918
Bpu14I TTCGAA 1 cut(s) 1877
BpuEI CTTGAG 2 cut(s) 551, 1559
BpuMI CCSGG 3 cut(s) 429, 1032, 1107
BsaHI GRCGYC 2 cut(s) 422, 2122
BsaI GGTCTC 1 cut(s) 392
BsaJI CCNNGG 2 cut(s) 964, 1145
BsaWI WCCGGW 3 cut(s) 350, 450, 575
BsaXI ACNNNNNCTCC 8 cut(s) 1313, 1343, 1377, 1405, 1407, 1435, 1592, 1622
Bsc4I CCNNNNNNNGG 8 cut(s) 332, 617, 618, 971, 1012, 1091, 1353, 1354
Bse118I RCCGGY 3 cut(s) 247, 1150, 1885
Bse1I ACTGG 9 cut(s) 71, 398, 439, 761, 865, 905, 990, 1282, 1607
Bse3DI GCAATG 2 cut(s) 550, 1845
BseBI CCWGG 2 cut(s) 966, 1529
BseDI CCNNGG 2 cut(s) 964, 1145
BseGI GGATG 3 cut(s) 173, 301, 2065
BseLI CCNNNNNNNGG 8 cut(s) 332, 617, 618, 971, 1012, 1091, 1353, 1354
BseMI GCAATG 2 cut(s) 550, 1845
BseMII CTCAG 9 cut(s) 842, 884, 932, 1013, 1063, 1139, 2184, 2228, 2328
BseNI ACTGG 9 cut(s) 71, 398, 439, 761, 865, 905, 990, 1282, 1607
BsePI GCGCGC 1 cut(s) 278
BseRI GAGGAG 7 cut(s) 101, 175, 178, 1379, 1382, 1410, 2251
BseSI GKGCMC 2 cut(s) 666, 1164
BseYI CCCAGC 4 cut(s) 326, 665, 945, 1408
Bsh1236I CGCG 4 cut(s) 280, 479, 1295, 1312
BshFI GGCC 6 cut(s) 344, 1150, 1259, 1607, 1844, 2003
BshNI GGYRCC 2 cut(s) 218, 1159
BsiHKAI GWGCWC 3 cut(s) 1600, 1626, 2310
BsiHKCI CYCGRG 4 cut(s) 154, 257, 460, 991
BslFI GGGAC 3 cut(s) 267, 594, 928
BslI CCNNNNNNNGG 8 cut(s) 332, 617, 618, 971, 1012, 1091, 1353, 1354
BsmAI GTCTC 6 cut(s) 392, 429, 873, 1497, 2129, 2204
BsmBI CGTCTC 2 cut(s) 429, 2129
BsmFI GGGAC 3 cut(s) 267, 594, 928
BsmI GAATGC 1 cut(s) 1116
BsnI GGCC 6 cut(s) 344, 1150, 1259, 1607, 1844, 2003
Bso31I GGTCTC 1 cut(s) 392
BsoBI CYCGRG 4 cut(s) 154, 257, 460, 991
Bsp119I TTCGAA 1 cut(s) 1877
Bsp1286I GDGCHC 8 cut(s) 155, 161, 264, 666, 1164, 1600, 1626, 2310
Bsp143I GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
Bsp1720I GCTNAGC 1 cut(s) 918
BspANI GGCC 6 cut(s) 344, 1150, 1259, 1607, 1844, 2003
BspCNI CTCAG 9 cut(s) 841, 883, 931, 1012, 1062, 1138, 2183, 2227, 2327
BspFNI CGCG 4 cut(s) 280, 479, 1295, 1312
BspHI TCATGA 2 cut(s) 852, 1036
BspMAI CTGCAG 2 cut(s) 237, 1230
BspMI ACCTGC 1 cut(s) 314
BspPI GGATC 4 cut(s) 361, 464, 997, 1022
BspQI GCTCTTC 1 cut(s) 676
BspT104I TTCGAA 1 cut(s) 1877
BspT107I GGYRCC 2 cut(s) 218, 1159
BspTNI GGTCTC 1 cut(s) 392
BsrBI CCGCTC 1 cut(s) 510
BsrDI GCAATG 2 cut(s) 550, 1845
BsrFI RCCGGY 3 cut(s) 247, 1150, 1885
BsrI ACTGG 9 cut(s) 71, 398, 439, 761, 865, 905, 990, 1282, 1607
BssAI RCCGGY 3 cut(s) 247, 1150, 1885
BssECI CCNNGG 2 cut(s) 964, 1145
BssHII GCGCGC 1 cut(s) 278
BssMI GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
BssNI GRCGYC 2 cut(s) 422, 2122
Bst2UI CCWGG 2 cut(s) 966, 1529
Bst4CI ACNGT 4 cut(s) 403, 527, 1702, 2113
Bst6I CTCTTC 1 cut(s) 676
BstACI GRCGYC 2 cut(s) 422, 2122
BstAPI GCANNNNNTGC 4 cut(s) 502, 1222, 1225, 1237
BstBI TTCGAA 1 cut(s) 1877
BstC8I GCNNGC 7 cut(s) 280, 311, 377, 1299, 1356, 2001, 2294
BstF5I GGATG 3 cut(s) 173, 301, 2065
BstFNI CGCG 4 cut(s) 280, 479, 1295, 1312
BstH2I RGCGCY 3 cut(s) 958, 1650, 2302
BstHHI GCGC 8 cut(s) 280, 282, 679, 957, 1297, 1312, 1649, 2301
BstKTI GATC 6 cut(s) 356, 459, 568, 1005, 1030, 1561
BstMAI GTCTC 6 cut(s) 392, 429, 873, 1497, 2129, 2204
BstMBI GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
BstNI CCWGG 2 cut(s) 966, 1529
BstSCI CCNGG 5 cut(s) 427, 964, 1030, 1105, 1527
BstSFI CTRYAG 2 cut(s) 233, 1226
BstSLI GKGCMC 2 cut(s) 666, 1164
BstUI CGCG 4 cut(s) 280, 479, 1295, 1312
BstV2I GAAGAC 1 cut(s) 1471
BstX2I RGATCY 2 cut(s) 456, 1002
BstXI CCANNNNNNTGG 1 cut(s) 1939
BstYI RGATCY 2 cut(s) 456, 1002
BsuRI GGCC 6 cut(s) 344, 1150, 1259, 1607, 1844, 2003
BtrI CACGTC 1 cut(s) 469
BtsCI GGATG 3 cut(s) 173, 301, 2065
BtsI GCAGTG 1 cut(s) 1668
BtsIMutI CAGTG 4 cut(s) 912, 1600, 1668, 2109
BveI ACCTGC 1 cut(s) 314
Cac8I GCNNGC 7 cut(s) 280, 311, 377, 1299, 1356, 2001, 2294
CaiI CAGNNNCTG 5 cut(s) 445, 525, 835, 1222, 1556
CciI TCATGA 2 cut(s) 852, 1036
CfoI GCGC 8 cut(s) 280, 282, 679, 957, 1297, 1312, 1649, 2301
Cfr10I RCCGGY 3 cut(s) 247, 1150, 1885
Cfr13I GGNCC 8 cut(s) 254, 303, 608, 988, 1243, 1605, 1795, 2002
CseI GACGC 5 cut(s) 411, 468, 485, 2111, 2258
Csp6I GTAC 3 cut(s) 1016, 1275, 2241
CspCI CAANNNNNGTGG 2 cut(s) 949, 984
CviAII CATG 5 cut(s) 776, 853, 901, 1037, 2258
CviQI GTAC 3 cut(s) 1016, 1275, 2241
DpnI GATC 6 cut(s) 355, 458, 567, 1004, 1029, 1560
DpnII GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
DrdI GACNNNNNNGTC 1 cut(s) 406
DriI GACNNNNNGTC 1 cut(s) 478
DseDI GACNNNNNNGTC 1 cut(s) 406
Eam1104I CTCTTC 1 cut(s) 676
Eam1105I GACNNNNNGTC 1 cut(s) 478
EarI CTCTTC 1 cut(s) 676
Ecl136II GAGCTC 2 cut(s) 1624, 2308
Eco24I GRGCYC 5 cut(s) 155, 161, 264, 1626, 2310
Eco31I GGTCTC 1 cut(s) 392
Eco47I GGWCC 6 cut(s) 254, 303, 608, 988, 1243, 1795
Eco53kI GAGCTC 2 cut(s) 1624, 2308
Eco57I CTGAAG 8 cut(s) 299, 923, 1049, 1334, 1506, 2075, 2179, 2304
Eco88I CYCGRG 4 cut(s) 154, 257, 460, 991
EcoICRI GAGCTC 2 cut(s) 1624, 2308
EcoO109I RGGNCCY 3 cut(s) 254, 608, 2002
EcoRII CCWGG 2 cut(s) 964, 1527
EcoT38I GRGCYC 5 cut(s) 155, 161, 264, 1626, 2310
Esp3I CGTCTC 2 cut(s) 429, 2129
FaeI CATG 5 cut(s) 779, 856, 904, 1040, 2261
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 2265, 2297
FaqI GGGAC 3 cut(s) 267, 594, 928
FatI CATG 5 cut(s) 775, 852, 900, 1036, 2257
FauI CCCGC 5 cut(s) 356, 368, 503, 541, 1347
FauNDI CATATG 1 cut(s) 141
FbaI TGATCA 1 cut(s) 1558
FokI GGATG 3 cut(s) 160, 308, 2072
FriOI GRGCYC 5 cut(s) 155, 161, 264, 1626, 2310
FspBI CTAG 1 cut(s) 1872
GlaI GCGC 8 cut(s) 279, 281, 678, 956, 1296, 1311, 1648, 2300
GsaI CCCAGC 4 cut(s) 330, 669, 949, 1412
GsuI CTGGAG 1 cut(s) 359
HaeII RGCGCY 3 cut(s) 958, 1650, 2302
HaeIII GGCC 6 cut(s) 344, 1150, 1259, 1607, 1844, 2003
HgaI GACGC 5 cut(s) 411, 468, 485, 2111, 2258
HhaI GCGC 8 cut(s) 280, 282, 679, 957, 1297, 1312, 1649, 2301
Hin1I GRCGYC 2 cut(s) 422, 2122
Hin1II CATG 5 cut(s) 779, 856, 904, 1040, 2261
Hin6I GCGC 8 cut(s) 278, 280, 677, 955, 1295, 1310, 1647, 2299
HinP1I GCGC 8 cut(s) 278, 280, 677, 955, 1295, 1310, 1647, 2299
HincII GTYRAC 1 cut(s) 1780
HindII GTYRAC 1 cut(s) 1780
HinfI GANTC 9 cut(s) 322, 793, 832, 1501, 1564, 1879, 2030, 2212, 2276
HpaI GTTAAC 1 cut(s) 1780
HphI GGTGA 3 cut(s) 788, 1196, 1313
Hpy166II GTNNAC 4 cut(s) 303, 472, 1780, 2068
Hpy8I GTNNAC 4 cut(s) 303, 472, 1780, 2068
Hpy99I CGWCG 3 cut(s) 470, 479, 484
HpyCH4III ACNGT 4 cut(s) 403, 527, 1702, 2113
HpyCH4IV ACGT 1 cut(s) 468
HpyCH4V TGCA 7 cut(s) 235, 505, 1114, 1228, 1384, 1524, 1618
HpySE526I ACGT 1 cut(s) 468
Hsp92I GRCGYC 2 cut(s) 422, 2122
Hsp92II CATG 5 cut(s) 779, 856, 904, 1040, 2261
HspAI GCGC 8 cut(s) 278, 280, 677, 955, 1295, 1310, 1647, 2299
KflI GGGWCCC 2 cut(s) 254, 608
Ksp22I TGATCA 1 cut(s) 1558
KspAI GTTAAC 1 cut(s) 1780
Kzo9I GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
LguI GCTCTTC 1 cut(s) 676
LmnI GCTCC 8 cut(s) 88, 150, 453, 594, 879, 925, 1621, 1629
LweI GCATC 5 cut(s) 62, 182, 359, 2029, 2050
MaeI CTAG 1 cut(s) 1872
MaeII ACGT 1 cut(s) 468
MaeIII GTNAC 8 cut(s) 62, 346, 907, 1961, 1970, 2050, 2198, 2277
MalI GATC 6 cut(s) 355, 458, 567, 1004, 1029, 1560
MbiI CCGCTC 1 cut(s) 510
MboI GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
MboII GAAGA 7 cut(s) 88, 128, 663, 929, 1196, 1447, 1471
MflI RGATCY 2 cut(s) 456, 1002
MhlI GDGCHC 8 cut(s) 155, 161, 264, 666, 1164, 1600, 1626, 2310
MluI ACGCGT 1 cut(s) 477
MlyI GAGTC 2 cut(s) 2206, 2285
MmeI TCCRAC 3 cut(s) 366, 1318, 1773
MseI TTAA 5 cut(s) 1710, 1730, 1779, 1917, 2046
MslI CAYNNNNRTG 2 cut(s) 905, 1850
MspA1I CMGCKG 6 cut(s) 50, 330, 499, 682, 1354, 2174
MspR9I CCNGG 5 cut(s) 429, 966, 1032, 1107, 1529
Mva1269I GAATGC 1 cut(s) 1116
MvaI CCWGG 2 cut(s) 966, 1529
MvnI CGCG 4 cut(s) 280, 479, 1295, 1312
NciI CCSGG 3 cut(s) 429, 1032, 1107
NdeI CATATG 1 cut(s) 141
NdeII GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
NlaIII CATG 5 cut(s) 779, 856, 904, 1040, 2261
NmeAIII GCCGAG 1 cut(s) 2327
NmuCI GTSAC 6 cut(s) 62, 346, 907, 1961, 1970, 2277
NspV TTCGAA 1 cut(s) 1877
PagI TCATGA 2 cut(s) 852, 1036
PauI GCGCGC 1 cut(s) 278
PciSI GCTCTTC 1 cut(s) 676
PcsI WCGNNNNNNNCGW 2 cut(s) 117, 597
PctI GAATGC 1 cut(s) 1116
PfeI GAWTC 7 cut(s) 322, 793, 832, 1501, 1564, 1879, 2030
PfoI TCCNGGA 1 cut(s) 1105
PleI GAGTC 2 cut(s) 2206, 2284
PpsI GAGTC 2 cut(s) 2206, 2284
PpuMI RGGWCCY 2 cut(s) 254, 608
Psp124BI GAGCTC 2 cut(s) 1626, 2310
Psp5II RGGWCCY 2 cut(s) 254, 608
Psp6I CCWGG 2 cut(s) 964, 1527
PspFI CCCAGC 4 cut(s) 326, 665, 945, 1408
PspGI CCWGG 2 cut(s) 964, 1527
PspPI GGNCC 8 cut(s) 254, 303, 608, 988, 1243, 1605, 1795, 2002
PspPPI RGGWCCY 2 cut(s) 254, 608
PstI CTGCAG 2 cut(s) 237, 1230
PstNI CAGNNNCTG 5 cut(s) 445, 525, 835, 1222, 1556
PsuI RGATCY 2 cut(s) 456, 1002
PteI GCGCGC 1 cut(s) 278
PvuII CAGCTG 2 cut(s) 499, 2174
RsaI GTAC 3 cut(s) 1017, 1276, 2242
RsaNI GTAC 3 cut(s) 1016, 1275, 2241
RseI CAYNNNNRTG 2 cut(s) 905, 1850
SacI GAGCTC 2 cut(s) 1626, 2310
SapI GCTCTTC 1 cut(s) 676
SaqAI TTAA 5 cut(s) 1710, 1730, 1779, 1917, 2046
Sau3AI GATC 6 cut(s) 353, 456, 565, 1002, 1027, 1558
Sau96I GGNCC 8 cut(s) 254, 303, 608, 988, 1243, 1605, 1795, 2002
SchI GAGTC 2 cut(s) 2206, 2285
ScrFI CCNGG 5 cut(s) 429, 966, 1032, 1107, 1529
SduI GDGCHC 8 cut(s) 155, 161, 264, 666, 1164, 1600, 1626, 2310
SfaNI GCATC 5 cut(s) 62, 182, 359, 2029, 2050
SfcI CTRYAG 2 cut(s) 233, 1226
SfuI TTCGAA 1 cut(s) 1877
SgrAI CRCCGGYG 1 cut(s) 247
SinI GGWCC 6 cut(s) 254, 303, 608, 988, 1243, 1795
SmiMI CAYNNNNRTG 2 cut(s) 905, 1850
SmlI CTYRAG 2 cut(s) 530, 1538
SmoI CTYRAG 2 cut(s) 530, 1538
SspI AATATT 1 cut(s) 1022
SspMI CTAG 1 cut(s) 1872
SstI GAGCTC 2 cut(s) 1626, 2310
StyD4I CCNGG 5 cut(s) 427, 964, 1030, 1105, 1527
TaaI ACNGT 4 cut(s) 403, 527, 1702, 2113
TaiI ACGT 1 cut(s) 471
TaqI TCGA 5 cut(s) 320, 564, 582, 1877, 2262
TatI WGTACW 1 cut(s) 2240
TfiI GAWTC 7 cut(s) 322, 793, 832, 1501, 1564, 1879, 2030
Tru1I TTAA 5 cut(s) 1710, 1730, 1779, 1917, 2046
Tru9I TTAA 5 cut(s) 1710, 1730, 1779, 1917, 2046
TscAI CASTG 4 cut(s) 912, 1607, 1675, 2116
TseFI GTSAC 6 cut(s) 62, 346, 907, 1961, 1970, 2277
Tsp45I GTSAC 6 cut(s) 62, 346, 907, 1961, 1970, 2277
TspDTI ATGAA 7 cut(s) 128, 728, 841, 869, 889, 1415, 2246
TspGWI ACGGA 1 cut(s) 2222
TspRI CASTG 4 cut(s) 912, 1607, 1675, 2116
VpaK11BI GGWCC 6 cut(s) 254, 303, 608, 988, 1243, 1795
XapI RAATTY 1 cut(s) 1855
XcmI CCANNNNNNNNNTGG 3 cut(s) 334, 965, 1171
XspI CTAG 1 cut(s) 1872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.