Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0002481

Physical Location & Seq

Genomic Coordinates Reverse (-)

43934576 .. 43937506

Gene Structure 2931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG202900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGAAGGCCATGCCCCTACCCTTTGAGGAGTTTCAAGGGAAGGGGGTGTTAGATTTCTCATCTGATTCTTCAGATTTGTTAGCTTCACCAGCACCACAGGGCCACCATCAGCAACCTCAAAAGTGGAAGGAGAATTGCTATGTGGGCAGCACTGAGCCCACTTCTGTTCTCGACGCCAGAAGAAGCCCAAGCCCTCCTACATCCTCTTCAACTCTGTCTTCTTCTCACGGCAGCGGCGGTGGAAGTGGGTCTACAGATACCACCCCTACCACCGGCGTGGCGGCTGCGGCTCCGGCAGAAAACAAGCCATCTGAAGCAGGTCTAGAAGAAGCAAAATGTGGACCACCACTTGGAATGGAGGACTGGGAGAGTGTGCTGTCTGAGTCACCAGGTCAAGAGCAGTCCATTCTTAGGTTGATGATGAGTGACATTGAAGACCCATCTCTTGGATTGAACAAGCTGCTGCAGAGTGGGGTTGGTTCTCATCAAGATTTTGGGTTTCATGATGTGGTGGAGGATCAAGGTTATGGCGCCTTTGAAGAACACAATACTGGGAGTTTGAATTTAGGGATGAGCAGCATTGTGAACCCTTCTTTGCAAGTAACATCTTGTTCTGAAATTCCTTTGAGTGGCTCATATGCTACCGTTTTCTCTGCTTCAGCAAACAATATGTTCCCAGTTTCACTGCCTCCTGGTTTGTTTCAACAGCAACAACAATTGGTTGAGCCTCTGGATGAGAAGCCACAAATTTTCAATCCAAATATGGTGATGAATCAAAACCAAGCTCAGTTTAATCAAAACCCTGCGATGTTTATGCCTTTGCCGTATTCCCAATTGCAAGACCACCACTTCCTTTCCCCACCTCCGGCAAAAAGGCATAATTCTGGTGGCTTTGGACCCAGTTACCCGGGCCAGAGAGTGCCGTTTTTGAATCCGGGTCAAGAGCTAATGGCTCGGGTACAACAGCAGCAGCAGCAGCATCAGCAGCAGCAGCTTCCGTTGCTTCCACAACATCTCCAACACAGGCCAGTTATGTTAGCCGCGAAGGACAAAATGGTGAACAATCTGGAAGGGGATAAAGAATTGATGAACAACCACCAGCTTCATCAAGCGATAGTTGACCAGCTTGTCAATGCAGCAGAGCTGATCGAAACAGGCAATCCGTTACTCGCGCAAGGGATATTGGCGCGGCTCAATCAACAGCTCTCTCCTATTGTTCTCCAATTTGCCAACTTTACTTGCAACCAAGCCATCCTTGAATCTGTGGAAGGCTTTAATCGTGTCCATGTTATCGATTTTGATATTGGCTATGGTGGGCAATGGGCTTCTTTTATGCAAGAGGTGGCTTTAAGAAATGGTGGTTCGCCTCCTTCTCTCAAAATCACTGCATTTGTATGCTCTTCGATGCACGATGAATTCGAGCTGGCTTTCACTCAAGAAAACCTCAAGAACTTTGCTTGTGAGCTCAATTTGGCATTTGAACTCGAAATTGTAAGTATTGAGGCATTGAACTCTGGTTCTTGGCCATTACCACTTCATGGCTCAGAGGGTGTGGCAGTTGCTGTCAATCTTCCAATTGCTTCCTTCTTGAATTCCCGTTTATCGCTTCCTTTGGTCCTGCGCTTTGTTAAGCAGCTTTCTCCCAAAATTGTGGTATCCTTGGAAAGGGGCAGTGACCGGACTGATATCCCATTTCCCCACCAAATCATTCAAGCCGTTTACTGTTACTCAAGCCTTCTTGAATCATTAGATGCTGTAAATGCAAACCTAGATGCCCTGCAAAAGATTGAGCAGTACTTGCTCCAACCAAGCATTGAAAAGATTGTAATGGGCTGCCATCTTTCTCCTAAAAGGACACCGACACCTTCTTGGAGGACTCTGTTTTTGTCATCTGGGTTCTCCCCGTTGACATTCAGCAATTTCACCGAGTCCCAAGCCGATTGCTTGGTGCAACGGACTCCAGTTGGGGGTTTCCATGTTGAGAAGAGACAGTCTTCGCTTGTGCTCTGCTGGCAGCGGAAGGATCTCATCTCAGCCTCAGGGTGGCGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007623 GO:0008150 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048511 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071840 GO:0080090 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

684

Amino Acids

74.84

Weight (kDa)

5.2

Isoelectric Point (pI)

60.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	401 - 683	7.8e-72	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00150
fragaria_vesca	FvH4_5g00020 FvH4_5g00020 FvH4_7g11120
malus_domestica	MD00G1043300.v1.1 MD02G1210200.v1.1 MD04G1088100.v1.1 MD07G1115800.v1.1
prunus_persica	Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.5G072300_v2.0.a1 Prupe.5G072300_v2.0.a1
pyrus_communis	pycom02g17200 pycom06g05130 pycom07g10860
rosa_chinensis	RchiOBHm_Chr1g0349141 RchiOBHm_Chr7g0202931
rosa_laevigata	RLG00000003564 RLG00000028602
rosa_multiflora	Rmu_co8366677.1_g000001 Rmu_co8449587.1_g000001 Rmu_sc0008159.1_g000016 Rmu_ssc0000150.1_g000020
rosa_roxburghii	Rroxscaffold_3G00254180 Rroxscaffold_4G00306070
rosa_rugosa	Rorug01G0200700 Rorug07G0074000
rosa_samantha	Rh1AG218400 Rh1BG183800 Rh1CG202900 Rh1DG213600 Rh7AG201800 Rh7BG202000 Rh7CG213100 Rh7DG208800
rosa_wichuraiana	Rw1G018550 Rw7G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1127
Acc36I	ACCTGC	1 cut(s)	308
AccB1I	GGYRCC	1 cut(s)	530
AccB7I	CCANNNNNTGG	3 cut(s)	350, 446, 1538
AccI	GTMKAC	1 cut(s)	251
AccII	CGCG	3 cut(s)	1043, 1172, 1189
AciI	CCGC	8 cut(s)	234, 237, 281, 287, 1041, 1189, 2017, 2047
AclWI	GGATC	2 cut(s)	525, 2031
AcoI	YGGCCR	1 cut(s)	1523
AcsI	RAATTY	5 cut(s)	562, 618, 747, 1415, 1591
AcuI	CTGAAG	3 cut(s)	54, 333, 642
AcyI	GRCGYC	2 cut(s)	174, 531
AfaI	GTAC	2 cut(s)	960, 1796
AjnI	CCWGG	2 cut(s)	388, 691
AleI	CACNNNNGTG	1 cut(s)	275
Alw21I	GWGCWC	2 cut(s)	1467, 2007
Alw26I	GTCTC	1 cut(s)	1981
AlwI	GGATC	2 cut(s)	525, 2031
AlwNI	CAGNNNCTG	1 cut(s)	1562
Ama87I	CYCGRG	2 cut(s)	907, 954
AoxI	GGCC	5 cut(s)	6, 100, 910, 1025, 1523
ApoI	RAATTY	5 cut(s)	562, 618, 747, 1415, 1591
ArsI	GACNNNNNNTTYG	2 cut(s)	1867, 1899
AspLEI	GCGC	4 cut(s)	533, 1174, 1189, 1623
AspS9I	GGNCC	5 cut(s)	100, 341, 896, 910, 1615
AsuC2I	CCSGG	3 cut(s)	908, 909, 936
AsuHPI	GGTGA	5 cut(s)	78, 378, 778, 1069, 1915
AvaI	CYCGRG	2 cut(s)	907, 954
AvaII	GGWCC	3 cut(s)	341, 896, 1615
AxyI	CCTNAGG	1 cut(s)	2038
BalI	TGGCCA	1 cut(s)	1525
BanI	GGYRCC	1 cut(s)	530
BanII	GRGCYC	2 cut(s)	159, 1467
BarI	GAAGNNNNNNTAC	2 cut(s)	235, 267
BbsI	GAAGAC	3 cut(s)	210, 441, 1986
Bbv12I	GWGCWC	2 cut(s)	1467, 2007
BccI	CCATC	5 cut(s)	114, 316, 448, 1259, 1845
BceAI	ACGGC	4 cut(s)	244, 808, 907, 1700
BcgI	CGANNNNNNTGC	2 cut(s)	796, 830
BciT130I	CCWGG	2 cut(s)	390, 693
BciVI	GTATCC	1 cut(s)	1666
BcnI	CCSGG	3 cut(s)	908, 909, 936
BcoDI	GTCTC	1 cut(s)	1981
BfaI	CTAG	2 cut(s)	323, 1769
BfmI	CTRYAG	2 cut(s)	252, 464
BfoI	RGCGCY	1 cut(s)	534
BfuAI	ACCTGC	1 cut(s)	308
BfuI	GTATCC	1 cut(s)	1666
BmcAI	AGTACT	1 cut(s)	1796
Bme1390I	CCNGG	5 cut(s)	390, 693, 908, 909, 936
Bme18I	GGWCC	3 cut(s)	341, 896, 1615
BmeT110I	CYCGRG	2 cut(s)	907, 954
BmgT120I	GGNCC	5 cut(s)	100, 341, 896, 910, 1615
BmiI	GGNNCC	3 cut(s)	291, 532, 898
BmrFI	CCNGG	5 cut(s)	390, 693, 908, 909, 936
BmrI	ACTGGG	4 cut(s)	373, 561, 671, 894
BmsI	GCATC	4 cut(s)	988, 1395, 1741, 1762
BmuI	ACTGGG	4 cut(s)	373, 561, 671, 894
BpiI	GAAGAC	3 cut(s)	210, 441, 1986
BpmI	CTGGAG	1 cut(s)	1944
BpuEI	CTTGAG	3 cut(s)	1419, 1430, 1714
BpuMI	CCSGG	3 cut(s)	908, 909, 936
Bsa29I	ATCGAT	1 cut(s)	1293
BsaHI	GRCGYC	2 cut(s)	174, 531
BsaJI	CCNNGG	2 cut(s)	907, 1659
BsaWI	WCCGGW	1 cut(s)	1677
BsaXI	ACNNNNNCTCC	2 cut(s)	999, 1029
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	6 cut(s)	368, 556, 677, 900, 1028, 1961
Bse21I	CCTNAGG	1 cut(s)	2038
Bse3DI	GCAATG	1 cut(s)	1325
BseBI	CCWGG	2 cut(s)	390, 693
BseCI	ATCGAT	1 cut(s)	1293
BseDI	CCNNGG	2 cut(s)	907, 1659
BseGI	GGATG	4 cut(s)	200, 576, 739, 1251
BseMI	GCAATG	1 cut(s)	1325
BseMII	CTCAG	6 cut(s)	144, 372, 800, 1557, 2046, 2052
BseNI	ACTGG	6 cut(s)	368, 556, 677, 900, 1028, 1961
BseRI	GAGGAG	1 cut(s)	41
Bsh1236I	CGCG	3 cut(s)	1043, 1172, 1189
BshFI	GGCC	5 cut(s)	8, 102, 912, 1027, 1525
BshNI	GGYRCC	1 cut(s)	530
BshVI	ATCGAT	1 cut(s)	1293
BsiHKAI	GWGCWC	2 cut(s)	1467, 2007
BsiHKCI	CYCGRG	2 cut(s)	907, 954
BsiSI	CCGG	6 cut(s)	273, 293, 866, 908, 935, 1678
BslFI	GGGAC	1 cut(s)	1915
BsmAI	GTCTC	1 cut(s)	1981
BsmFI	GGGAC	1 cut(s)	1915
BsnI	GGCC	5 cut(s)	8, 102, 912, 1027, 1525
BsoBI	CYCGRG	2 cut(s)	907, 954
Bsp1286I	GDGCHC	3 cut(s)	159, 1467, 2007
Bsp143I	GATC	3 cut(s)	517, 1146, 2023
BspACI	CCGC	8 cut(s)	234, 237, 281, 287, 1041, 1189, 2017, 2047
BspANI	GGCC	5 cut(s)	8, 102, 912, 1027, 1525
BspCNI	CTCAG	6 cut(s)	145, 373, 799, 1556, 2045, 2051
BspDI	ATCGAT	1 cut(s)	1293
BspFNI	CGCG	3 cut(s)	1043, 1172, 1189
BspHI	TCATGA	1 cut(s)	502
BspLI	GGNNCC	3 cut(s)	291, 532, 898
BspMAI	CTGCAG	1 cut(s)	468
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	2 cut(s)	525, 2031
BspQI	GCTCTTC	1 cut(s)	1405
BspT107I	GGYRCC	1 cut(s)	530
BsrDI	GCAATG	1 cut(s)	1325
BsrFI	RCCGGY	1 cut(s)	272
BsrI	ACTGG	6 cut(s)	368, 556, 677, 900, 1028, 1961
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	2 cut(s)	907, 1659
BssMI	GATC	3 cut(s)	517, 1146, 2023
BssNI	GRCGYC	2 cut(s)	174, 531
BssT1I	CCWWGG	1 cut(s)	1659
Bst2UI	CCWGG	2 cut(s)	390, 693
Bst4CI	ACNGT	3 cut(s)	646, 1724, 1992
Bst6I	CTCTTC	3 cut(s)	211, 1405, 1979
BstACI	GRCGYC	2 cut(s)	174, 531
BstAPI	GCANNNNNTGC	1 cut(s)	1798
BstC8I	GCNNGC	2 cut(s)	1425, 2012
BstDEI	CTNAG	7 cut(s)	153, 381, 410, 786, 1543, 2032, 2038
BstENI	CCTNNNNNAGG	1 cut(s)	1663
BstF5I	GGATG	4 cut(s)	200, 576, 739, 1251
BstFNI	CGCG	3 cut(s)	1043, 1172, 1189
BstH2I	RGCGCY	1 cut(s)	534
BstHHI	GCGC	4 cut(s)	533, 1174, 1189, 1623
BstKTI	GATC	3 cut(s)	520, 1149, 2026
BstMAI	GTCTC	1 cut(s)	1981
BstMBI	GATC	3 cut(s)	517, 1146, 2023
BstNI	CCWGG	2 cut(s)	390, 693
BstSCI	CCNGG	5 cut(s)	388, 691, 906, 907, 934
BstSFI	CTRYAG	2 cut(s)	252, 464
BstUI	CGCG	3 cut(s)	1043, 1172, 1189
BstV2I	GAAGAC	3 cut(s)	210, 441, 1986
BstX2I	RGATCY	1 cut(s)	2023
BstXI	CCANNNNNNTGG	2 cut(s)	277, 1651
BstYI	RGATCY	1 cut(s)	2023
Bsu15I	ATCGAT	1 cut(s)	1293
Bsu36I	CCTNAGG	1 cut(s)	2038
BsuI	GTATCC	1 cut(s)	1666
BsuRI	GGCC	5 cut(s)	8, 102, 912, 1027, 1525
BsuTUI	ATCGAT	1 cut(s)	1293
BtgZI	GCGATG	1 cut(s)	821
BtsCI	GGATG	4 cut(s)	200, 576, 739, 1251
BtsI	GCAGTG	3 cut(s)	683, 1383, 1678
BtsIMutI	CAGTG	4 cut(s)	150, 683, 1383, 1678
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	2 cut(s)	1425, 2012
CaiI	CAGNNNCTG	1 cut(s)	1562
CciI	TCATGA	1 cut(s)	502
CfoI	GCGC	4 cut(s)	533, 1174, 1189, 1623
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	5 cut(s)	100, 341, 896, 910, 1615
Cfr9I	CCCGGG	1 cut(s)	907
ClaI	ATCGAT	1 cut(s)	1293
CseI	GACGC	1 cut(s)	182
CsiI	ACCWGGT	1 cut(s)	388
Csp6I	GTAC	2 cut(s)	959, 1795
CviAII	CATG	5 cut(s)	10, 503, 1286, 1538, 1976
CviQI	GTAC	2 cut(s)	959, 1795
DdeI	CTNAG	7 cut(s)	153, 381, 410, 786, 1543, 2032, 2038
DinI	GGCGCC	1 cut(s)	532
DpnI	GATC	3 cut(s)	519, 1148, 2025
DpnII	GATC	3 cut(s)	517, 1146, 2023
DrdI	GACNNNNNNGTC	1 cut(s)	1127
DseDI	GACNNNNNNGTC	1 cut(s)	1127
EaeI	YGGCCR	1 cut(s)	1523
Eam1104I	CTCTTC	3 cut(s)	211, 1405, 1979
EarI	CTCTTC	3 cut(s)	211, 1405, 1979
Ecl136II	GAGCTC	1 cut(s)	1465
Eco130I	CCWWGG	1 cut(s)	1659
Eco24I	GRGCYC	2 cut(s)	159, 1467
Eco32I	GATATC	1 cut(s)	1687
Eco47I	GGWCC	3 cut(s)	341, 896, 1615
Eco53kI	GAGCTC	1 cut(s)	1465
Eco57I	CTGAAG	3 cut(s)	54, 333, 642
Eco81I	CCTNAGG	1 cut(s)	2038
Eco88I	CYCGRG	2 cut(s)	907, 954
EcoICRI	GAGCTC	1 cut(s)	1465
EcoNI	CCTNNNNNAGG	1 cut(s)	1663
EcoRI	GAATTC	2 cut(s)	1415, 1591
EcoRII	CCWGG	2 cut(s)	388, 691
EcoRV	GATATC	1 cut(s)	1687
EcoT14I	CCWWGG	1 cut(s)	1659
EcoT38I	GRGCYC	2 cut(s)	159, 1467
EgeI	GGCGCC	1 cut(s)	532
EheI	GGCGCC	1 cut(s)	532
ErhI	CCWWGG	1 cut(s)	1659
FaeI	CATG	5 cut(s)	13, 506, 1289, 1541, 1979
FalI	AAGNNNNNCTT	2 cut(s)	1239, 1271
FaqI	GGGAC	1 cut(s)	1915
FatI	CATG	5 cut(s)	9, 502, 1285, 1537, 1975
FauNDI	CATATG	1 cut(s)	637
FblI	GTMKAC	1 cut(s)	251
FokI	GGATG	4 cut(s)	187, 583, 746, 1238
FriOI	GRGCYC	2 cut(s)	159, 1467
FspBI	CTAG	2 cut(s)	323, 1769
GlaI	GCGC	4 cut(s)	532, 1173, 1188, 1622
GsuI	CTGGAG	1 cut(s)	1944
HaeII	RGCGCY	1 cut(s)	534
HaeIII	GGCC	5 cut(s)	8, 102, 912, 1027, 1525
HapII	CCGG	6 cut(s)	273, 293, 866, 908, 935, 1678
HgaI	GACGC	1 cut(s)	182
HhaI	GCGC	4 cut(s)	533, 1174, 1189, 1623
Hin1I	GRCGYC	2 cut(s)	174, 531
Hin1II	CATG	5 cut(s)	13, 506, 1289, 1541, 1979
Hin6I	GCGC	4 cut(s)	531, 1172, 1187, 1621
HinP1I	GCGC	4 cut(s)	531, 1172, 1187, 1621
HincII	GTYRAC	2 cut(s)	1120, 1908
HindII	GTYRAC	2 cut(s)	1120, 1908
HinfI	GANTC	9 cut(s)	65, 383, 772, 931, 1259, 1742, 1876, 1928, 1957
HpaII	CCGG	6 cut(s)	273, 293, 866, 908, 935, 1678
HphI	GGTGA	5 cut(s)	78, 378, 778, 1069, 1915
Hpy166II	GTNNAC	7 cut(s)	252, 341, 586, 1060, 1120, 1720, 1908
Hpy188I	TCNGA	6 cut(s)	64, 73, 313, 382, 616, 1546
Hpy8I	GTNNAC	7 cut(s)	252, 341, 586, 1060, 1120, 1720, 1908
Hpy99I	CGWCG	1 cut(s)	176
HpyCH4III	ACNGT	3 cut(s)	646, 1724, 1992
HpyF3I	CTNAG	7 cut(s)	153, 381, 410, 786, 1543, 2032, 2038
Hsp92I	GRCGYC	2 cut(s)	174, 531
Hsp92II	CATG	5 cut(s)	13, 506, 1289, 1541, 1979
HspAI	GCGC	4 cut(s)	531, 1172, 1187, 1621
KasI	GGCGCC	1 cut(s)	530
Kzo9I	GATC	3 cut(s)	517, 1146, 2023
LguI	GCTCTTC	1 cut(s)	1405
LmnI	GCTCC	2 cut(s)	295, 1806
LweI	GCATC	4 cut(s)	988, 1395, 1741, 1762
MabI	ACCWGGT	1 cut(s)	388
MaeI	CTAG	2 cut(s)	323, 1769
MaeIII	GTNAC	7 cut(s)	384, 425, 601, 902, 1164, 1673, 1724
MalI	GATC	3 cut(s)	519, 1148, 2025
MboI	GATC	3 cut(s)	517, 1146, 2023
MfeI	CAATTG	3 cut(s)	716, 833, 1575
MflI	RGATCY	1 cut(s)	2023
MhlI	GDGCHC	3 cut(s)	159, 1467, 2007
MlsI	TGGCCA	1 cut(s)	1525
MluNI	TGGCCA	1 cut(s)	1525
Mly113I	GGCGCC	1 cut(s)	531
MlyI	GAGTC	4 cut(s)	392, 1870, 1937, 1951
MmeI	TCCRAC	2 cut(s)	1042, 1828
Mox20I	TGGCCA	1 cut(s)	1525
MscI	TGGCCA	1 cut(s)	1525
MseI	TTAA	4 cut(s)	792, 1275, 1349, 1629
MslI	CAYNNNNRTG	2 cut(s)	275, 1393
Msp20I	TGGCCA	1 cut(s)	1525
MspA1I	CMGCKG	2 cut(s)	234, 2017
MspI	CCGG	6 cut(s)	273, 293, 866, 908, 935, 1678
MspR9I	CCNGG	5 cut(s)	390, 693, 908, 909, 936
MunI	CAATTG	3 cut(s)	716, 833, 1575
MvaI	CCWGG	2 cut(s)	390, 693
MvnI	CGCG	3 cut(s)	1043, 1172, 1189
NarI	GGCGCC	1 cut(s)	531
NciI	CCSGG	3 cut(s)	908, 909, 936
NdeI	CATATG	1 cut(s)	637
NdeII	GATC	3 cut(s)	517, 1146, 2023
NlaIII	CATG	5 cut(s)	13, 506, 1289, 1541, 1979
NlaIV	GGNNCC	3 cut(s)	291, 532, 898
NmuCI	GTSAC	3 cut(s)	384, 425, 1673
OliI	CACNNNNGTG	1 cut(s)	275
PagI	TCATGA	1 cut(s)	502
PciSI	GCTCTTC	1 cut(s)	1405
PcsI	WCGNNNNNNNCGW	1 cut(s)	1416
PfeI	GAWTC	5 cut(s)	65, 772, 931, 1259, 1742
PflMI	CCANNNNNTGG	3 cut(s)	350, 446, 1538
PleI	GAGTC	4 cut(s)	391, 1870, 1936, 1951
PluTI	GGCGCC	1 cut(s)	534
PpsI	GAGTC	4 cut(s)	391, 1870, 1936, 1951
Psp124BI	GAGCTC	1 cut(s)	1467
Psp6I	CCWGG	2 cut(s)	388, 691
PspGI	CCWGG	2 cut(s)	388, 691
PspN4I	GGNNCC	3 cut(s)	291, 532, 898
PspPI	GGNCC	5 cut(s)	100, 341, 896, 910, 1615
PstI	CTGCAG	1 cut(s)	468
PstNI	CAGNNNCTG	1 cut(s)	1562
PsuI	RGATCY	1 cut(s)	2023
RsaI	GTAC	2 cut(s)	960, 1796
RsaNI	GTAC	2 cut(s)	959, 1795
RseI	CAYNNNNRTG	2 cut(s)	275, 1393
SacI	GAGCTC	1 cut(s)	1467
SapI	GCTCTTC	1 cut(s)	1405
SaqAI	TTAA	4 cut(s)	792, 1275, 1349, 1629
Sau3AI	GATC	3 cut(s)	517, 1146, 2023
Sau96I	GGNCC	5 cut(s)	100, 341, 896, 910, 1615
ScaI	AGTACT	1 cut(s)	1796
SchI	GAGTC	4 cut(s)	392, 1870, 1937, 1951
ScrFI	CCNGG	5 cut(s)	390, 693, 908, 909, 936
SduI	GDGCHC	3 cut(s)	159, 1467, 2007
SexAI	ACCWGGT	1 cut(s)	388
SfaNI	GCATC	4 cut(s)	988, 1395, 1741, 1762
SfcI	CTRYAG	2 cut(s)	252, 464
SfoI	GGCGCC	1 cut(s)	532
SgrAI	CRCCGGYG	1 cut(s)	272
SinI	GGWCC	3 cut(s)	341, 896, 1615
SmaI	CCCGGG	1 cut(s)	909
SmiMI	CAYNNNNRTG	2 cut(s)	275, 1393
SmlI	CTYRAG	3 cut(s)	1434, 1445, 1729
SmoI	CTYRAG	3 cut(s)	1434, 1445, 1729
SsiI	CCGC	8 cut(s)	234, 237, 281, 287, 1041, 1189, 2017, 2047
SspDI	GGCGCC	1 cut(s)	530
SspMI	CTAG	2 cut(s)	323, 1769
SstI	GAGCTC	1 cut(s)	1467
StyD4I	CCNGG	5 cut(s)	388, 691, 906, 907, 934
StyI	CCWWGG	1 cut(s)	1659
TaaI	ACNGT	3 cut(s)	646, 1724, 1992
TaqI	TCGA	6 cut(s)	171, 1149, 1293, 1403, 1419, 1485
TatI	WGTACW	1 cut(s)	1794
TauI	GCSGC	5 cut(s)	237, 284, 290, 1043, 1192
TfiI	GAWTC	5 cut(s)	65, 772, 931, 1259, 1742
Tru1I	TTAA	4 cut(s)	792, 1275, 1349, 1629
Tru9I	TTAA	4 cut(s)	792, 1275, 1349, 1629
TscAI	CASTG	4 cut(s)	157, 690, 1390, 1678
TseFI	GTSAC	3 cut(s)	384, 425, 1673
Tsp45I	GTSAC	3 cut(s)	384, 425, 1673
TspDTI	ATGAA	7 cut(s)	17, 491, 785, 1094, 1103, 1428, 1526
TspGWI	ACGGA	3 cut(s)	987, 1152, 1969
TspMI	CCCGGG	1 cut(s)	907
TspRI	CASTG	4 cut(s)	157, 690, 1390, 1678
Van91I	CCANNNNNTGG	3 cut(s)	350, 446, 1538
VpaK11BI	GGWCC	3 cut(s)	341, 896, 1615
XagI	CCTNNNNNAGG	1 cut(s)	1663
XapI	RAATTY	5 cut(s)	562, 618, 747, 1415, 1591
XbaI	TCTAGA	1 cut(s)	322
XmaI	CCCGGG	1 cut(s)	907
XmiI	GTMKAC	1 cut(s)	251
XspI	CTAG	2 cut(s)	323, 1769
ZrmI	AGTACT	1 cut(s)	1796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.