Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0002481

Physical Location & Seq

Genomic Coordinates Forward (+)

11188917 .. 11191163

Gene Structure 2247 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g10860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGAAGGCCATGCCCCTACCTTTTGAGGAGTTTCAAGGGAAGGGGGTGTTAGATTTCTCTTCTGTTTCTTCTTCTGCTGCTGCTGCTTCAGATTCATTTCTATCGCCGCCGCCACCGCCGCCGCAAAAGTGGAATCACCACCACCAAAACAGCAAGGAGAATTGTTATGTGGGCGGCTCTGAGCCCACCTCTGTTCTCGATACCAGAAGAAGCCCAAGCCCTCCGACATCCTCCTCAACACTGTCTTCCTCCCACGGCAGCGGAGCCAGCGGTGGCTGCGGCCGCTCTACAGACACAACAACTGCGGGGGTTGAAAACCCATCTCGAACACCCTTAGAGGAACAAAAATGCGGGCCGCCCCTCGGCATGGAGGACTGGGAGAGCGTTCTGTCTGAGTCTCCCGGTCAAGAGCAGTCCATCCTGAGGTTGATTATGAGTGATATAGAAGACCCGTCTCTCGGATTGAACACGCTGCTGCAGAGTTCAAGCGGCTCTGATAATCTCCATCAAGATTTGGAATTCAGCGGCGGAGGGTTTCAAGATGTGGTGGATCAAGGAGGATACGGAGGCGGATTCGAACCCAATAACAATTCTGGGAGTTTGGTGAGCCCCTCTCTACATGCAAGTTCTGGTCCTGATTTTAATTTCAGTAATAATGCATCAAATGTTGAGACTCGGAGCAGCAATGTGAGACCAAACCCTGCAATCTTCTCTGCTTCAATGAGCAATCCTTTTCTGGTATCGCAATCTTCCGGCATGTTTCAGCAGCAACAGAGCATGGGATTGGATGAGAAGCCTCAGATTTTCAATCCCCAGATGGTAATTAACGAAAACCAAGCTCAGTTTGCACAGTACCCAGCTATGTTTATGCCTTTGACGTATGCCCAATTGCAAGAGCACCACCTTCTGTCACCGCCACCGTCAAAAAGGCTCAATTCTGGTGAATTAGGACCCAGTTACCCGGTCCAAAGGGTACCGTTTTCGAATCCCGGGCAAGAGCTAGTGGTTCGGGCTCAGCAGCAGCTTCAGTTTCTTCCTCAGCACCTTCAGCAGCAGAGGCCAACAATGCCGGTGGCAAAGGAGAAAATGATGAGCCCAGCAGAGGGCTGTAAAGAAATGATGAACCAGAACCAGCTGCAGCAGCAGCAGTTTCAGCAAGCGGTAATTGACCAGCTTTTCAATGCAGCAGAGCTGATCGAAACAGGAAATTTGGTACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCTCCCATTGGTAAGCCATTTTCAAGGACTGCTTTTTACTTCAAGGAGGCCTTGCAATTTCTCCTAAACACCAACACCTCTAGTAACTGCTCTTCGGCCTTGTCGCCTTTTAGCATCATTTTCAAGATTGGTGCTTATAAATCGTTCTCTGAAATCTCACCTGTTGTCCAATTTGCCAATTTTACTTGTAACCAAGCCATCCTTGAAGCCGTGGAGGGCTTTAATCGTGTTCATGTTATTGATTTTGATATTGGCTATGGTGGCCAATGGGCTTCTTTTATGCAAGAAGTTGCCTTGAGAAATGGGGGTGTACCATCTCTTAAAATCACTGCATTTATATCCTCTTCCACCCATGATGAATTCGAGGTTAGTTTCACTCGAGAAAACCTCATACACTTTGCTAGTGAGCTCAACTTGGCATTCGAACTTGAACTTGTAAGCCTTGAGTCATTGAACTCTGGTTCTTTGGGATTGCCTCTTCCTGCCTCTGAGGGTGTGGCAGTTGCTGTCAATCTCCCGATTGGCTCCTTTTCGAATAACCCCTTGTCGCTTCCTTTGATCTTGCGCTTTGTTAAGCAGCTTTCTCCCAGAATTGTGGTTTCTTTGGACAGAGGCAGTGACCGGACCGATGTTCCATTTCCCCACCAAATAATCCAAGCCCTCTACTCTTACTCTGGCTTGCTTGAATCAATAGATGCTGCAAATGTAAACCCAGATACCCTGCAGAAGATTGAGAGGTACTTGCTCCAACCAGGCATTGAAAAGATTGTAACAGGCTGCCATCTTTTGCCTAAAAGAACACCTTCATGGAGAACACTGTTTTTGTCATCTGGGTTCTCCCCATTGACATTCAGCAATTTCACCGAGTCCCAAGCCGAGTGTTTGGTGCAGCGGACTCCGGTTGGGGGTTTCCACATCGAGAAGAGACAGTCTTCGCTTGTTCTCCGCTGGCAGTGCAAGGATCTCATATCGGCCTCGGCTTGGAGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007623 GO:0008150 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048511 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071840 GO:0080090 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

749

Amino Acids

81.63

Weight (kDa)

5.35

Isoelectric Point (pI)

62.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	390 - 747	2.1e-89	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00150
fragaria_vesca	FvH4_5g00020 FvH4_5g00020 FvH4_7g11120
malus_domestica	MD00G1043300.v1.1 MD02G1210200.v1.1 MD04G1088100.v1.1 MD07G1115800.v1.1
prunus_persica	Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.5G072300_v2.0.a1 Prupe.5G072300_v2.0.a1
pyrus_communis	pycom02g17200 pycom06g05130 pycom07g10860
rosa_chinensis	RchiOBHm_Chr1g0349141 RchiOBHm_Chr7g0202931
rosa_laevigata	RLG00000003564 RLG00000028602
rosa_multiflora	Rmu_co8366677.1_g000001 Rmu_co8449587.1_g000001 Rmu_sc0008159.1_g000016 Rmu_ssc0000150.1_g000020
rosa_roxburghii	Rroxscaffold_3G00254180 Rroxscaffold_4G00306070
rosa_rugosa	Rorug01G0200700 Rorug07G0074000
rosa_samantha	Rh1AG218400 Rh1BG183800 Rh1CG202900 Rh1DG213600 Rh7AG201800 Rh7BG202000 Rh7CG213100 Rh7DG208800
rosa_wichuraiana	Rw1G018550 Rw7G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1392
Acc65I	GGTACC	1 cut(s)	973
AccB1I	GGYRCC	1 cut(s)	973
AccBSI	CCGCTC	1 cut(s)	285
AccII	CGCG	2 cut(s)	1220, 1237
AclWI	GGATC	2 cut(s)	558, 2223
AcoI	YGGCCR	2 cut(s)	280, 1516
AcsI	RAATTY	3 cut(s)	518, 1207, 1613
AcuI	CTGAAG	3 cut(s)	72, 1010, 1031
AfaI	GTAC	5 cut(s)	854, 975, 1215, 1566, 1994
AfiI	CCNNNNNNNGG	8 cut(s)	362, 367, 423, 458, 1102, 1103, 2159, 2235
AjnI	CCWGG	1 cut(s)	2005
Alw21I	GWGCWC	2 cut(s)	900, 1665
Alw26I	GTCTC	5 cut(s)	402, 459, 665, 685, 2173
AlwI	GGATC	2 cut(s)	558, 2223
AlwNI	CAGNNNCTG	1 cut(s)	1760
Ama87I	CYCGRG	2 cut(s)	989, 1632
AoxI	GGCC	8 cut(s)	6, 280, 353, 1058, 1302, 1350, 1516, 2226
ApoI	RAATTY	3 cut(s)	518, 1207, 1613
Asp700I	GAANNNNTTC	1 cut(s)	2056
Asp718I	GGTACC	1 cut(s)	973
AspLEI	GCGC	3 cut(s)	1222, 1237, 1821
AspS9I	GGNCC	5 cut(s)	353, 632, 950, 964, 1878
AsuC2I	CCSGG	4 cut(s)	402, 962, 990, 991
AsuHPI	GGTGA	7 cut(s)	128, 616, 903, 953, 1238, 1404, 2107
AsuII	TTCGAA	4 cut(s)	576, 983, 1677, 1787
AvaI	CYCGRG	2 cut(s)	989, 1632
AvaII	GGWCC	4 cut(s)	632, 950, 964, 1878
AxyI	CCTNAGG	1 cut(s)	422
BalI	TGGCCA	1 cut(s)	1518
BanI	GGYRCC	1 cut(s)	973
BanII	GRGCYC	5 cut(s)	186, 611, 1015, 1097, 1665
BarI	GAAGNNNNNNTAC	2 cut(s)	1330, 1362
BbsI	GAAGAC	3 cut(s)	237, 453, 2178
Bbv12I	GWGCWC	2 cut(s)	900, 1665
BbvCI	CCTCAGC	1 cut(s)	1038
BccI	CCATC	7 cut(s)	328, 425, 513, 811, 1460, 1576, 2043
BceAI	ACGGC	2 cut(s)	271, 1448
BciT130I	CCWGG	1 cut(s)	2007
BciVI	GTATCC	1 cut(s)	554
BcnI	CCSGG	4 cut(s)	402, 962, 990, 991
BcoDI	GTCTC	5 cut(s)	402, 459, 665, 685, 2173
BfaI	CTAG	3 cut(s)	1001, 1335, 1656
BfmI	CTRYAG	4 cut(s)	288, 476, 1136, 1976
BfuI	GTATCC	1 cut(s)	554
BlpI	GCTNAGC	1 cut(s)	1014
Bme1390I	CCNGG	5 cut(s)	402, 962, 990, 991, 2007
Bme18I	GGWCC	4 cut(s)	632, 950, 964, 1878
BmeT110I	CYCGRG	2 cut(s)	989, 1632
BmgT120I	GGNCC	5 cut(s)	353, 632, 950, 964, 1878
BmiI	GGNNCC	4 cut(s)	265, 952, 975, 1780
BmrFI	CCNGG	5 cut(s)	402, 962, 990, 991, 2007
BmrI	ACTGGG	2 cut(s)	385, 948
BmsI	GCATC	3 cut(s)	668, 1377, 1939
BmuI	ACTGGG	2 cut(s)	385, 948
BpiI	GAAGAC	3 cut(s)	237, 453, 2178
BplI	GAGNNNNNCTC	6 cut(s)	173, 205, 598, 630, 1626, 1658
Bpu10I	CCTNAGC	1 cut(s)	1038
Bpu1102I	GCTNAGC	1 cut(s)	1014
Bpu14I	TTCGAA	4 cut(s)	576, 983, 1677, 1787
BpuEI	CTTGAG	2 cut(s)	1570, 1718
BpuMI	CCSGG	4 cut(s)	402, 962, 990, 991
BsaI	GGTCTC	1 cut(s)	685
BsaJI	CCNNGG	5 cut(s)	253, 361, 989, 1464, 2229
BsaWI	WCCGGW	2 cut(s)	1875, 2152
Bsc4I	CCNNNNNNNGG	8 cut(s)	362, 367, 423, 458, 1102, 1103, 2159, 2235
Bse118I	RCCGGY	1 cut(s)	1069
Bse1I	ACTGG	2 cut(s)	380, 954
Bse21I	CCTNAGG	1 cut(s)	422
Bse3DI	GCAATG	1 cut(s)	691
BseBI	CCWGG	1 cut(s)	2007
BseDI	CCNNGG	5 cut(s)	253, 361, 989, 1464, 2229
BseGI	GGATG	4 cut(s)	227, 417, 793, 1452
BseLI	CCNNNNNNNGG	8 cut(s)	362, 367, 423, 458, 1102, 1103, 2159, 2235
BseMI	GCAATG	1 cut(s)	691
BseMII	CTCAG	8 cut(s)	171, 384, 413, 812, 854, 1028, 1052, 1734
BseNI	ACTGG	2 cut(s)	380, 954
BseRI	GAGGAG	2 cut(s)	41, 223
BseX3I	CGGCCG	1 cut(s)	280
BseYI	CCCAGC	2 cut(s)	856, 1096
BsgI	GTGCAG	1 cut(s)	2162
Bsh1236I	CGCG	2 cut(s)	1220, 1237
Bsh1285I	CGRYCG	1 cut(s)	283
BshFI	GGCC	8 cut(s)	8, 282, 355, 1060, 1304, 1352, 1518, 2228
BshNI	GGYRCC	1 cut(s)	973
BsiEI	CGRYCG	1 cut(s)	283
BsiHKAI	GWGCWC	2 cut(s)	900, 1665
BsiHKCI	CYCGRG	2 cut(s)	989, 1632
BsiSI	CCGG	7 cut(s)	402, 753, 962, 990, 1070, 1876, 2153
BslFI	GGGAC	1 cut(s)	2107
BslI	CCNNNNNNNGG	8 cut(s)	362, 367, 423, 458, 1102, 1103, 2159, 2235
BsmAI	GTCTC	5 cut(s)	402, 459, 665, 685, 2173
BsmBI	CGTCTC	1 cut(s)	459
BsmFI	GGGAC	1 cut(s)	2107
BsmI	GAATGC	1 cut(s)	1673
BsnI	GGCC	8 cut(s)	8, 282, 355, 1060, 1304, 1352, 1518, 2228
Bso31I	GGTCTC	1 cut(s)	685
BsoBI	CYCGRG	2 cut(s)	989, 1632
Bsp119I	TTCGAA	4 cut(s)	576, 983, 1677, 1787
Bsp1286I	GDGCHC	6 cut(s)	186, 611, 900, 1015, 1097, 1665
Bsp143I	GATC	4 cut(s)	550, 1194, 1812, 2215
Bsp1720I	GCTNAGC	1 cut(s)	1014
BspANI	GGCC	8 cut(s)	8, 282, 355, 1060, 1304, 1352, 1518, 2228
BspCNI	CTCAG	8 cut(s)	172, 385, 414, 811, 853, 1027, 1051, 1735
BspFNI	CGCG	2 cut(s)	1220, 1237
BspLI	GGNNCC	4 cut(s)	265, 952, 975, 1780
BspMAI	CTGCAG	3 cut(s)	480, 1140, 1980
BspPI	GGATC	2 cut(s)	558, 2223
BspQI	GCTCTTC	1 cut(s)	1351
BspT104I	TTCGAA	4 cut(s)	576, 983, 1677, 1787
BspT107I	GGYRCC	1 cut(s)	973
BspTNI	GGTCTC	1 cut(s)	685
BsrBI	CCGCTC	1 cut(s)	285
BsrDI	GCAATG	1 cut(s)	691
BsrFI	RCCGGY	1 cut(s)	1069
BsrI	ACTGG	2 cut(s)	380, 954
BssAI	RCCGGY	1 cut(s)	1069
BssECI	CCNNGG	5 cut(s)	253, 361, 989, 1464, 2229
BssMI	GATC	4 cut(s)	550, 1194, 1812, 2215
Bst2UI	CCWGG	1 cut(s)	2007
Bst4CI	ACNGT	6 cut(s)	243, 852, 921, 978, 2073, 2184
Bst6I	CTCTTC	5 cut(s)	64, 1351, 1603, 1737, 2171
BstBI	TTCGAA	4 cut(s)	576, 983, 1677, 1787
BstC8I	GCNNGC	5 cut(s)	268, 353, 1158, 1934, 2204
BstDEI	CTNAG	9 cut(s)	180, 334, 393, 422, 798, 840, 1014, 1038, 1743
BstDSI	CCRYGG	2 cut(s)	253, 1464
BstF5I	GGATG	4 cut(s)	227, 417, 793, 1452
BstFNI	CGCG	2 cut(s)	1220, 1237
BstHHI	GCGC	3 cut(s)	1222, 1237, 1821
BstKTI	GATC	4 cut(s)	553, 1197, 1815, 2218
BstMAI	GTCTC	5 cut(s)	402, 459, 665, 685, 2173
BstMBI	GATC	4 cut(s)	550, 1194, 1812, 2215
BstMCI	CGRYCG	1 cut(s)	283
BstNI	CCWGG	1 cut(s)	2007
BstNSI	RCATGY	2 cut(s)	623, 760
BstSCI	CCNGG	5 cut(s)	400, 960, 988, 989, 2005
BstSFI	CTRYAG	4 cut(s)	288, 476, 1136, 1976
BstUI	CGCG	2 cut(s)	1220, 1237
BstV2I	GAAGAC	3 cut(s)	237, 453, 2178
BstX2I	RGATCY	1 cut(s)	2215
BstXI	CCANNNNNNTGG	1 cut(s)	1849
BstYI	RGATCY	1 cut(s)	2215
BstZI	CGGCCG	1 cut(s)	280
Bsu36I	CCTNAGG	1 cut(s)	422
BsuI	GTATCC	1 cut(s)	554
BsuRI	GGCC	8 cut(s)	8, 282, 355, 1060, 1304, 1352, 1518, 2228
BtgI	CCRYGG	2 cut(s)	253, 1464
BtsCI	GGATG	4 cut(s)	227, 417, 793, 1452
BtsI	GCAGTG	3 cut(s)	1581, 1876, 2213
BtsIMutI	CAGTG	5 cut(s)	239, 1581, 1876, 2069, 2213
Cac8I	GCNNGC	5 cut(s)	268, 353, 1158, 1934, 2204
CaiI	CAGNNNCTG	1 cut(s)	1760
CciNI	GCGGCCGC	1 cut(s)	280
CfoI	GCGC	3 cut(s)	1222, 1237, 1821
Cfr10I	RCCGGY	1 cut(s)	1069
Cfr13I	GGNCC	5 cut(s)	353, 632, 950, 964, 1878
Cfr9I	CCCGGG	1 cut(s)	989
CpoI	CGGWCCG	1 cut(s)	1878
Csp6I	GTAC	5 cut(s)	853, 974, 1214, 1565, 1993
CspCI	CAANNNNNGTGG	2 cut(s)	1053, 1088
CspI	CGGWCCG	1 cut(s)	1878
CviAII	CATG	8 cut(s)	10, 367, 620, 757, 778, 1487, 1607, 2061
CviQI	GTAC	5 cut(s)	853, 974, 1214, 1565, 1993
DdeI	CTNAG	9 cut(s)	180, 334, 393, 422, 798, 840, 1014, 1038, 1743
DpnI	GATC	4 cut(s)	552, 1196, 1814, 2217
DpnII	GATC	4 cut(s)	550, 1194, 1812, 2215
EaeI	YGGCCR	2 cut(s)	280, 1516
EagI	CGGCCG	1 cut(s)	280
Eam1104I	CTCTTC	5 cut(s)	64, 1351, 1603, 1737, 2171
EarI	CTCTTC	5 cut(s)	64, 1351, 1603, 1737, 2171
EciI	GGCGGA	2 cut(s)	543, 585
Ecl136II	GAGCTC	1 cut(s)	1663
EclXI	CGGCCG	1 cut(s)	280
Eco147I	AGGCCT	1 cut(s)	1304
Eco24I	GRGCYC	5 cut(s)	186, 611, 1015, 1097, 1665
Eco31I	GGTCTC	1 cut(s)	685
Eco47I	GGWCC	4 cut(s)	632, 950, 964, 1878
Eco52I	CGGCCG	1 cut(s)	280
Eco53kI	GAGCTC	1 cut(s)	1663
Eco57I	CTGAAG	3 cut(s)	72, 1010, 1031
Eco81I	CCTNAGG	1 cut(s)	422
Eco88I	CYCGRG	2 cut(s)	989, 1632
EcoICRI	GAGCTC	1 cut(s)	1663
EcoO109I	RGGNCCY	1 cut(s)	950
EcoRI	GAATTC	2 cut(s)	518, 1613
EcoRII	CCWGG	1 cut(s)	2005
EcoT22I	ATGCAT	1 cut(s)	661
EcoT38I	GRGCYC	5 cut(s)	186, 611, 1015, 1097, 1665
Esp3I	CGTCTC	1 cut(s)	459
FaeI	CATG	8 cut(s)	13, 370, 623, 760, 781, 1490, 1610, 2064
FalI	AAGNNNNNCTT	8 cut(s)	1270, 1302, 1289, 1321, 1440, 1472, 2041, 2073
FaqI	GGGAC	1 cut(s)	2107
FatI	CATG	8 cut(s)	9, 366, 619, 756, 777, 1486, 1606, 2060
FauI	CCCGC	2 cut(s)	298, 344
FokI	GGATG	4 cut(s)	214, 404, 800, 1439
FriOI	GRGCYC	5 cut(s)	186, 611, 1015, 1097, 1665
FspBI	CTAG	3 cut(s)	1001, 1335, 1656
GlaI	GCGC	3 cut(s)	1221, 1236, 1820
GsaI	CCCAGC	2 cut(s)	860, 1100
HaeIII	GGCC	8 cut(s)	8, 282, 355, 1060, 1304, 1352, 1518, 2228
HapII	CCGG	7 cut(s)	402, 753, 962, 990, 1070, 1876, 2153
HhaI	GCGC	3 cut(s)	1222, 1237, 1821
Hin1II	CATG	8 cut(s)	13, 370, 623, 760, 781, 1490, 1610, 2064
Hin6I	GCGC	3 cut(s)	1220, 1235, 1819
HinP1I	GCGC	3 cut(s)	1220, 1235, 1819
HpaII	CCGG	7 cut(s)	402, 753, 962, 990, 1070, 1876, 2153
HphI	GGTGA	7 cut(s)	128, 616, 903, 953, 1238, 1404, 2107
Hpy166II	GTNNAC	2 cut(s)	1565, 1963
Hpy8I	GTNNAC	2 cut(s)	1565, 1963
HpyAV	CCTTC	4 cut(s)	34, 914, 1055, 2067
HpyCH4III	ACNGT	6 cut(s)	243, 852, 921, 978, 2073, 2184
HpyCH4IV	ACGT	1 cut(s)	878
HpyF3I	CTNAG	9 cut(s)	180, 334, 393, 422, 798, 840, 1014, 1038, 1743
HpySE526I	ACGT	1 cut(s)	878
Hsp92II	CATG	8 cut(s)	13, 370, 623, 760, 781, 1490, 1610, 2064
HspAI	GCGC	3 cut(s)	1220, 1235, 1819
KpnI	GGTACC	1 cut(s)	977
Kzo9I	GATC	4 cut(s)	550, 1194, 1812, 2215
LguI	GCTCTTC	1 cut(s)	1351
LmnI	GCTCC	4 cut(s)	263, 678, 1784, 2004
LweI	GCATC	3 cut(s)	668, 1377, 1939
MaeI	CTAG	3 cut(s)	1001, 1335, 1656
MaeII	ACGT	1 cut(s)	878
MaeIII	GTNAC	6 cut(s)	909, 956, 1337, 1442, 1871, 2023
MalI	GATC	4 cut(s)	552, 1196, 1814, 2217
MbiI	CCGCTC	1 cut(s)	285
MboI	GATC	4 cut(s)	550, 1194, 1812, 2215
MfeI	CAATTG	1 cut(s)	887
MflI	RGATCY	1 cut(s)	2215
MhlI	GDGCHC	6 cut(s)	186, 611, 900, 1015, 1097, 1665
MlsI	TGGCCA	1 cut(s)	1518
MluNI	TGGCCA	1 cut(s)	1518
MlyI	GAGTC	5 cut(s)	404, 667, 1709, 2129, 2143
MmeI	TCCRAC	2 cut(s)	248, 2026
Mox20I	TGGCCA	1 cut(s)	1518
Mph1103I	ATGCAT	1 cut(s)	661
MroXI	GAANNNNTTC	1 cut(s)	2056
MscI	TGGCCA	1 cut(s)	1518
MseI	TTAA	5 cut(s)	642, 825, 1476, 1575, 1827
MslI	CAYNNNNRTG	1 cut(s)	2059
Msp20I	TGGCCA	1 cut(s)	1518
MspA1I	CMGCKG	6 cut(s)	261, 270, 525, 1135, 2146, 2202
MspI	CCGG	7 cut(s)	402, 753, 962, 990, 1070, 1876, 2153
MspR9I	CCNGG	5 cut(s)	402, 962, 990, 991, 2007
MunI	CAATTG	1 cut(s)	887
Mva1269I	GAATGC	1 cut(s)	1673
MvaI	CCWGG	1 cut(s)	2007
MvnI	CGCG	2 cut(s)	1220, 1237
NciI	CCSGG	4 cut(s)	402, 962, 990, 991
NdeII	GATC	4 cut(s)	550, 1194, 1812, 2215
NlaIII	CATG	8 cut(s)	13, 370, 623, 760, 781, 1490, 1610, 2064
NlaIV	GGNNCC	4 cut(s)	265, 952, 975, 1780
NmeAIII	GCCGAG	3 cut(s)	342, 2155, 2210
NmuCI	GTSAC	2 cut(s)	909, 1871
NotI	GCGGCCGC	1 cut(s)	280
NsiI	ATGCAT	1 cut(s)	661
NspI	RCATGY	2 cut(s)	623, 760
NspV	TTCGAA	4 cut(s)	576, 983, 1677, 1787
PaeR7I	CTCGAG	1 cut(s)	1632
PceI	AGGCCT	1 cut(s)	1304
PciSI	GCTCTTC	1 cut(s)	1351
PctI	GAATGC	1 cut(s)	1673
PdmI	GAANNNNTTC	1 cut(s)	2056
PfeI	GAWTC	5 cut(s)	92, 133, 573, 985, 1940
PleI	GAGTC	5 cut(s)	403, 667, 1708, 2128, 2143
PpsI	GAGTC	5 cut(s)	403, 667, 1708, 2128, 2143
PpuMI	RGGWCCY	1 cut(s)	950
PsiI	TTATAA	1 cut(s)	1392
Psp124BI	GAGCTC	1 cut(s)	1665
Psp5II	RGGWCCY	1 cut(s)	950
Psp6I	CCWGG	1 cut(s)	2005
PspFI	CCCAGC	2 cut(s)	856, 1096
PspGI	CCWGG	1 cut(s)	2005
PspN4I	GGNNCC	4 cut(s)	265, 952, 975, 1780
PspPI	GGNCC	5 cut(s)	353, 632, 950, 964, 1878
PspPPI	RGGWCCY	1 cut(s)	950
PstI	CTGCAG	3 cut(s)	480, 1140, 1980
PstNI	CAGNNNCTG	1 cut(s)	1760
PsuI	RGATCY	1 cut(s)	2215
PvuII	CAGCTG	1 cut(s)	1135
RsaI	GTAC	5 cut(s)	854, 975, 1215, 1566, 1994
RsaNI	GTAC	5 cut(s)	853, 974, 1214, 1565, 1993
RseI	CAYNNNNRTG	1 cut(s)	2059
Rsr2I	CGGWCCG	1 cut(s)	1878
RsrII	CGGWCCG	1 cut(s)	1878
SacI	GAGCTC	1 cut(s)	1665
SapI	GCTCTTC	1 cut(s)	1351
SaqAI	TTAA	5 cut(s)	642, 825, 1476, 1575, 1827
Sau3AI	GATC	4 cut(s)	550, 1194, 1812, 2215
Sau96I	GGNCC	5 cut(s)	353, 632, 950, 964, 1878
SchI	GAGTC	5 cut(s)	404, 667, 1709, 2129, 2143
ScrFI	CCNGG	5 cut(s)	402, 962, 990, 991, 2007
SduI	GDGCHC	6 cut(s)	186, 611, 900, 1015, 1097, 1665
SfaNI	GCATC	3 cut(s)	668, 1377, 1939
SfcI	CTRYAG	4 cut(s)	288, 476, 1136, 1976
Sfr274I	CTCGAG	1 cut(s)	1632
SfuI	TTCGAA	4 cut(s)	576, 983, 1677, 1787
SinI	GGWCC	4 cut(s)	632, 950, 964, 1878
SlaI	CTCGAG	1 cut(s)	1632
SmaI	CCCGGG	1 cut(s)	991
SmiMI	CAYNNNNRTG	1 cut(s)	2059
SmlI	CTYRAG	3 cut(s)	1549, 1632, 1697
SmoI	CTYRAG	3 cut(s)	1549, 1632, 1697
SseBI	AGGCCT	1 cut(s)	1304
SspMI	CTAG	3 cut(s)	1001, 1335, 1656
SstI	GAGCTC	1 cut(s)	1665
StuI	AGGCCT	1 cut(s)	1304
StyD4I	CCNGG	5 cut(s)	400, 960, 988, 989, 2005
TaaI	ACNGT	6 cut(s)	243, 852, 921, 978, 2073, 2184
TaiI	ACGT	1 cut(s)	881
TaqII	GACCGA	1 cut(s)	1895
TfiI	GAWTC	5 cut(s)	92, 133, 573, 985, 1940
Tru1I	TTAA	5 cut(s)	642, 825, 1476, 1575, 1827
Tru9I	TTAA	5 cut(s)	642, 825, 1476, 1575, 1827
TscAI	CASTG	5 cut(s)	246, 1588, 1876, 2076, 2213
TseFI	GTSAC	2 cut(s)	909, 1871
Tsp45I	GTSAC	2 cut(s)	909, 1871
TspDTI	ATGAA	6 cut(s)	17, 84, 1136, 1475, 1626, 2049
TspGWI	ACGGA	1 cut(s)	579
TspMI	CCCGGG	1 cut(s)	989
TspRI	CASTG	5 cut(s)	246, 1588, 1876, 2076, 2213
VpaK11BI	GGWCC	4 cut(s)	632, 950, 964, 1878
XapI	RAATTY	3 cut(s)	518, 1207, 1613
XceI	RCATGY	2 cut(s)	623, 760
XhoI	CTCGAG	1 cut(s)	1632
XmaI	CCCGGG	1 cut(s)	989
XmnI	GAANNNNTTC	1 cut(s)	2056
XspI	CTAG	3 cut(s)	1001, 1335, 1656
Zsp2I	ATGCAT	1 cut(s)	661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.