Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002481

Physical Location & Seq

Genomic Coordinates Forward (+)

26875865 .. 26878455

Gene Structure 2591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00306070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGAAGATACAAAAGATGGTTCCAAAAATGGTCCTTGACATTGTGGGGTGGGTGGTCTCTGTTTCAAGCTCAGTTGGTTTGGAATTTGAAGTGAACCCATTTGTAATTTGTGGTCTGAGAGTCTTTTGTGGGTGTGTGGGGTTGTTCTTGTTCTTGAAAGCTGGAGGCTTTTGGATTCTTGGGTTTTTGGCGTCACCAGCACCACAGGGACACCCTCAACAACCACAAAAGTGGAAGGAAAATTGCTATGTGGGCAGCACTGAGCCCACTTCTGTTCTCGACACCAGAAGAAGCGCAAGCCCTCCTACGTCCTCTTCAACTCTGTCTTCTTCTCACGGCAGCGGCGGTGGAAGTGGGTCTACAGATACCACCACTACCACCGGCGTGGCGGTTGCGGCTCCCGCAGAAAACAAGCCATCGGAAACAGGTCTAGGGGAAGCAAAATGTGGACCACCACTTGGAATGGAGGACTGGGAGAGTGTGCTGTCTGAGTCACCAGGTCAAGAGCAGTCCATTCTTAGGTTGATGATGAGTGACATTGAAGACCCATCTCTTGGATTGAACAAGCTGCTGCAGAGTGGGGTTGGTTCTCATCAAGATTTTGGGTTTCATGATATGGTGGAGGATCAAGGTTATGGCGCCTTTGAAGAACACAATACAGGGAGTTTGAATTTGGGGATGAGCAGCATTGTTAACCCTTCTCTGCAAGCAACATCTTGTTCTGAAATTCCTTTCAATGGCTCAAATTCTACCGTTTTCTCTGCTTCAGCGAACAATCTGTTCCCAGGTTCACTACCACCTGGTTTGTTCCAACAGCAACAACAATTGGTTGAGCCTTTGGATGAGAAGCCACAAATTTTCAATCCACATATGGTGATGAATCAAAACCAAGCTCAGTTTAATCAAAATCCTGCGATGTTTATGCCACTGACGTATTCCCAATTGCAAGACAACCACTTCCTTTCCCCACCTCCGGCAAAAAGGCATAATTCCGGTGGCTTTGGACCCAGTTACCCGGGCCAGAGAGTCCCGTTTTTGAATCCGGGTCAAGAGCTAATGGCTCGGGTACATCAGCAGCAGCAGCAGCAGCTTCCGTTGCTTCCACAACATCTCCAACACAGGCCAGTAATGTTAGCCGCGAAGGACAAAATGGTGAACAATCTGGAAGGAGATAAAGAATTGATGAACAACCACCAGCTTCATCAAGCGATAGTTGACCAGCTTGTCAATGCAGCAGAGCTGATCGAAACAGGCAATCCGTTACTCGCGCAAGGGATATTGGCGCGGCTCAATCAACAGCTCTCTCCTATTGGTAAGCCTTTTCAAAGGGCTGCTTTCTATTTCAAGGAGGCCTTGGAATTACTACTTAACATGAACAACTCTCACTCTTCTGCTAATTTGTCACCCTTTAGCCTCGTTTACAAGATTGCTGCATATAAATCATTCTCTGAAATCTCACCAGTTCTCCAATTTGCCAACTTTACTTGCAACCAAGTCATCCTTGAATCTGTGGAAGGCTTTAATCGTGTCCATGTTATCGATTTTGATATTGGCTATGGTGGGCAATGGGCTTCTTTTATGCAAGAGGTGGCTTTAAGAAATGGTGGTTCGCCTCCTTCTCTCAAAATCACTGCATTTGTATGCTCTTCAATGCACGATGAATTCGAGCTGGCTTTCACTCAAGAAAACCTCAAGAACTTTGCTTGTGAGCTCAATTTGGCATTTGAACTCGAAATTGTAAGTATTGAGGCATTGAACTCTGGTTCTTGGCCATTACCACTTCATGGCTCAGAGGGTGTGGCAGTTGCTGTCAATCTTCCAACTGCTTCCTTCTTGAATTCCCGTTTATCGCTTGCTTTGGTCCTGCCCTTTGTTAAGCAGCTTTCTCCCAAAGTTGTGGTATCCTTGGAAAGGGGCAGTGACCGGACTGATATCCCATTTCCCCACCAAATCATTCAAGCCGTTCACTGTTACTCAAGCCTTCTTGAATCATTAGATGCTGTAAATGCAAACCTAGATGCCCTGCAAAAGATTGAGCGGTACTTGCTCCAACCAAGCATTGAAAAGATTGTAATGGGCTGCCATCTTTCTCCTAAAAGGACACCGACACGTTCTTGGAGGACTCTGTTTTTGTCATTTGGGTTCTCCCCGTTGACATTCAGCAATTTCACCGAGTCCCAAGCCGAGTGCTTGGTGCAACGGACTCCAGTTGGGGGTTTCCATGTTGAGAAGAGACAGTCTTCGCTTGTGCTCTGCTGGCAGCGGAAGGATCTCATCTCAGCCTCAGGGTGGCGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007623 GO:0008150 GO:0009653 GO:0009826 GO:0009888 GO:0009889 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048511 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051301 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071840 GO:0080090 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

766

Amino Acids

83.86

Weight (kDa)

5.73

Isoelectric Point (pI)

55.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	405 - 765	4.3e-93	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00150
fragaria_vesca	FvH4_5g00020 FvH4_5g00020 FvH4_7g11120
malus_domestica	MD00G1043300.v1.1 MD02G1210200.v1.1 MD04G1088100.v1.1 MD07G1115800.v1.1
prunus_persica	Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.2G138400_v2.0.a1 Prupe.5G072300_v2.0.a1 Prupe.5G072300_v2.0.a1
pyrus_communis	pycom02g17200 pycom06g05130 pycom07g10860
rosa_chinensis	RchiOBHm_Chr1g0349141 RchiOBHm_Chr7g0202931
rosa_laevigata	RLG00000003564 RLG00000028602
rosa_multiflora	Rmu_co8366677.1_g000001 Rmu_co8449587.1_g000001 Rmu_sc0008159.1_g000016 Rmu_ssc0000150.1_g000020
rosa_roxburghii	Rroxscaffold_3G00254180 Rroxscaffold_4G00306070
rosa_rugosa	Rorug01G0200700 Rorug07G0074000
rosa_samantha	Rh1AG218400 Rh1BG183800 Rh1CG202900 Rh1DG213600 Rh7AG201800 Rh7BG202000 Rh7CG213100 Rh7DG208800
rosa_wichuraiana	Rw1G018550 Rw7G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1223
AccB1I	GGYRCC	1 cut(s)	638
AccB7I	CCANNNNNTGG	3 cut(s)	458, 554, 1784
AccBSI	CCGCTC	1 cut(s)	2038
AccI	GTMKAC	1 cut(s)	359
AccII	CGCG	3 cut(s)	1139, 1268, 1285
AclWI	GGATC	2 cut(s)	633, 2277
AcoI	YGGCCR	1 cut(s)	1769
AcsI	RAATTY	7 cut(s)	83, 670, 726, 745, 855, 1661, 1837
AcuI	CTGAAG	1 cut(s)	750
AcyI	GRCGYC	2 cut(s)	191, 639
AfaI	GTAC	2 cut(s)	1068, 2042
AfiI	CCNNNNNNNGG	9 cut(s)	458, 519, 554, 737, 973, 1784, 1911, 2213, 2289
AflIII	ACRYGT	1 cut(s)	2108
AjnI	CCWGG	3 cut(s)	496, 784, 799
AleI	CACNNNNGTG	2 cut(s)	229, 383
Alw21I	GWGCWC	2 cut(s)	1713, 2253
Alw26I	GTCTC	2 cut(s)	61, 2227
AlwI	GGATC	2 cut(s)	633, 2277
AlwNI	CAGNNNCTG	1 cut(s)	1808
Ama87I	CYCGRG	2 cut(s)	1015, 1062
AoxI	GGCC	4 cut(s)	1018, 1121, 1350, 1769
ApoI	RAATTY	7 cut(s)	83, 670, 726, 745, 855, 1661, 1837
ArsI	GACNNNNNNTTYG	2 cut(s)	2113, 2145
AspLEI	GCGC	4 cut(s)	296, 641, 1270, 1285
AspS9I	GGNCC	5 cut(s)	31, 449, 1004, 1018, 1861
AsuC2I	CCSGG	3 cut(s)	1016, 1017, 1044
AsuHPI	GGTGA	7 cut(s)	186, 486, 886, 1165, 1395, 1449, 2161
AvaI	CYCGRG	2 cut(s)	1015, 1062
AvaII	GGWCC	4 cut(s)	31, 449, 1004, 1861
AxyI	CCTNAGG	1 cut(s)	2284
BalI	TGGCCA	1 cut(s)	1771
BanI	GGYRCC	1 cut(s)	638
BanII	GRGCYC	2 cut(s)	267, 1713
BarI	GAAGNNNNNNTAC	2 cut(s)	343, 375
BbsI	GAAGAC	3 cut(s)	318, 549, 2232
Bbv12I	GWGCWC	2 cut(s)	1713, 2253
BccI	CCATC	4 cut(s)	10, 424, 556, 2091
BceAI	ACGGC	2 cut(s)	352, 1946
BcgI	CGANNNNNNTGC	2 cut(s)	904, 938
BciT130I	CCWGG	3 cut(s)	498, 786, 801
BciVI	GTATCC	1 cut(s)	1912
BcnI	CCSGG	3 cut(s)	1016, 1017, 1044
BcoDI	GTCTC	2 cut(s)	61, 2227
BfaI	CTAG	2 cut(s)	431, 2015
BfmI	CTRYAG	2 cut(s)	360, 572
BfoI	RGCGCY	1 cut(s)	642
BfuI	GTATCC	1 cut(s)	1912
Bme1390I	CCNGG	6 cut(s)	498, 786, 801, 1016, 1017, 1044
Bme18I	GGWCC	4 cut(s)	31, 449, 1004, 1861
BmeT110I	CYCGRG	2 cut(s)	1015, 1062
BmgT120I	GGNCC	5 cut(s)	31, 449, 1004, 1018, 1861
BmiI	GGNNCC	4 cut(s)	21, 399, 640, 1006
BmrFI	CCNGG	6 cut(s)	498, 786, 801, 1016, 1017, 1044
BmrI	ACTGGG	2 cut(s)	481, 1002
BmsI	GCATC	2 cut(s)	1987, 2008
BmuI	ACTGGG	2 cut(s)	481, 1002
BpiI	GAAGAC	3 cut(s)	318, 549, 2232
BpmI	CTGGAG	2 cut(s)	183, 2190
BpuEI	CTTGAG	3 cut(s)	1665, 1676, 1960
BpuMI	CCSGG	3 cut(s)	1016, 1017, 1044
Bsa29I	ATCGAT	1 cut(s)	1539
BsaHI	GRCGYC	2 cut(s)	191, 639
BsaI	GGTCTC	1 cut(s)	61
BsaJI	CCNNGG	4 cut(s)	784, 1015, 1353, 1905
BsaWI	WCCGGW	2 cut(s)	992, 1923
BsaXI	ACNNNNNCTCC	4 cut(s)	1095, 1125, 1449, 1479
Bsc4I	CCNNNNNNNGG	9 cut(s)	458, 519, 554, 737, 973, 1784, 1911, 2213, 2289
Bse118I	RCCGGY	1 cut(s)	380
Bse1I	ACTGG	5 cut(s)	476, 1008, 1124, 1460, 2207
Bse21I	CCTNAGG	1 cut(s)	2284
Bse3DI	GCAATG	1 cut(s)	1571
BseBI	CCWGG	3 cut(s)	498, 786, 801
BseCI	ATCGAT	1 cut(s)	1539
BseDI	CCNNGG	4 cut(s)	784, 1015, 1353, 1905
BseGI	GGATG	3 cut(s)	684, 847, 1497
BseLI	CCNNNNNNNGG	9 cut(s)	458, 519, 554, 737, 973, 1784, 1911, 2213, 2289
BseMI	GCAATG	1 cut(s)	1571
BseMII	CTCAG	8 cut(s)	84, 107, 252, 480, 908, 1803, 2292, 2298
BseNI	ACTGG	5 cut(s)	476, 1008, 1124, 1460, 2207
Bsh1236I	CGCG	3 cut(s)	1139, 1268, 1285
BshFI	GGCC	4 cut(s)	1020, 1123, 1352, 1771
BshNI	GGYRCC	1 cut(s)	638
BshVI	ATCGAT	1 cut(s)	1539
BsiHKAI	GWGCWC	2 cut(s)	1713, 2253
BsiHKCI	CYCGRG	2 cut(s)	1015, 1062
BsiSI	CCGG	6 cut(s)	381, 974, 993, 1016, 1043, 1924
BslFI	GGGAC	3 cut(s)	222, 1013, 2161
BslI	CCNNNNNNNGG	9 cut(s)	458, 519, 554, 737, 973, 1784, 1911, 2213, 2289
BsmAI	GTCTC	2 cut(s)	61, 2227
BsmFI	GGGAC	3 cut(s)	222, 1013, 2161
BsnI	GGCC	4 cut(s)	1020, 1123, 1352, 1771
Bso31I	GGTCTC	1 cut(s)	61
BsoBI	CYCGRG	2 cut(s)	1015, 1062
Bsp1286I	GDGCHC	3 cut(s)	267, 1713, 2253
Bsp143I	GATC	3 cut(s)	625, 1242, 2269
BspANI	GGCC	4 cut(s)	1020, 1123, 1352, 1771
BspCNI	CTCAG	8 cut(s)	83, 108, 253, 481, 907, 1802, 2291, 2297
BspDI	ATCGAT	1 cut(s)	1539
BspFNI	CGCG	3 cut(s)	1139, 1268, 1285
BspHI	TCATGA	1 cut(s)	610
BspLI	GGNNCC	4 cut(s)	21, 399, 640, 1006
BspMAI	CTGCAG	1 cut(s)	576
BspPI	GGATC	2 cut(s)	633, 2277
BspQI	GCTCTTC	1 cut(s)	1651
BspT107I	GGYRCC	1 cut(s)	638
BspTNI	GGTCTC	1 cut(s)	61
BsrBI	CCGCTC	1 cut(s)	2038
BsrDI	GCAATG	1 cut(s)	1571
BsrFI	RCCGGY	1 cut(s)	380
BsrI	ACTGG	5 cut(s)	476, 1008, 1124, 1460, 2207
BssAI	RCCGGY	1 cut(s)	380
BssECI	CCNNGG	4 cut(s)	784, 1015, 1353, 1905
BssMI	GATC	3 cut(s)	625, 1242, 2269
BssNI	GRCGYC	2 cut(s)	191, 639
BssT1I	CCWWGG	2 cut(s)	1353, 1905
Bst2UI	CCWGG	3 cut(s)	498, 786, 801
Bst4CI	ACNGT	3 cut(s)	754, 1970, 2238
Bst6I	CTCTTC	4 cut(s)	319, 1393, 1651, 2225
BstACI	GRCGYC	2 cut(s)	191, 639
BstC8I	GCNNGC	5 cut(s)	298, 708, 1671, 1854, 2258
BstDEI	CTNAG	9 cut(s)	70, 116, 261, 489, 518, 894, 1789, 2278, 2284
BstENI	CCTNNNNNAGG	1 cut(s)	1909
BstF5I	GGATG	3 cut(s)	684, 847, 1497
BstFNI	CGCG	3 cut(s)	1139, 1268, 1285
BstH2I	RGCGCY	1 cut(s)	642
BstHHI	GCGC	4 cut(s)	296, 641, 1270, 1285
BstKTI	GATC	3 cut(s)	628, 1245, 2272
BstMAI	GTCTC	2 cut(s)	61, 2227
BstMBI	GATC	3 cut(s)	625, 1242, 2269
BstNI	CCWGG	3 cut(s)	498, 786, 801
BstSCI	CCNGG	6 cut(s)	496, 784, 799, 1014, 1015, 1042
BstSFI	CTRYAG	2 cut(s)	360, 572
BstUI	CGCG	3 cut(s)	1139, 1268, 1285
BstV2I	GAAGAC	3 cut(s)	318, 549, 2232
BstX2I	RGATCY	1 cut(s)	2269
BstXI	CCANNNNNNTGG	3 cut(s)	231, 385, 1897
BstYI	RGATCY	1 cut(s)	2269
Bsu15I	ATCGAT	1 cut(s)	1539
Bsu36I	CCTNAGG	1 cut(s)	2284
BsuI	GTATCC	1 cut(s)	1912
BsuRI	GGCC	4 cut(s)	1020, 1123, 1352, 1771
BsuTUI	ATCGAT	1 cut(s)	1539
BtgZI	GCGATG	1 cut(s)	929
BtsCI	GGATG	3 cut(s)	684, 847, 1497
BtsI	GCAGTG	2 cut(s)	1629, 1924
BtsIMutI	CAGTG	5 cut(s)	258, 926, 1629, 1924, 1966
Cac8I	GCNNGC	5 cut(s)	298, 708, 1671, 1854, 2258
CaiI	CAGNNNCTG	1 cut(s)	1808
CciI	TCATGA	1 cut(s)	610
CfoI	GCGC	4 cut(s)	296, 641, 1270, 1285
Cfr10I	RCCGGY	1 cut(s)	380
Cfr13I	GGNCC	5 cut(s)	31, 449, 1004, 1018, 1861
Cfr9I	CCCGGG	1 cut(s)	1015
ClaI	ATCGAT	1 cut(s)	1539
CseI	GACGC	1 cut(s)	180
CsiI	ACCWGGT	2 cut(s)	496, 799
Csp6I	GTAC	2 cut(s)	1067, 2041
CspCI	CAANNNNNGTGG	2 cut(s)	786, 821
CviAII	CATG	5 cut(s)	611, 1372, 1532, 1784, 2222
CviQI	GTAC	2 cut(s)	1067, 2041
DdeI	CTNAG	9 cut(s)	70, 116, 261, 489, 518, 894, 1789, 2278, 2284
DinI	GGCGCC	1 cut(s)	640
DpnI	GATC	3 cut(s)	627, 1244, 2271
DpnII	GATC	3 cut(s)	625, 1242, 2269
DrdI	GACNNNNNNGTC	1 cut(s)	1223
DseDI	GACNNNNNNGTC	1 cut(s)	1223
EaeI	YGGCCR	1 cut(s)	1769
Eam1104I	CTCTTC	4 cut(s)	319, 1393, 1651, 2225
EarI	CTCTTC	4 cut(s)	319, 1393, 1651, 2225
Ecl136II	GAGCTC	1 cut(s)	1711
Eco130I	CCWWGG	2 cut(s)	1353, 1905
Eco147I	AGGCCT	1 cut(s)	1352
Eco24I	GRGCYC	2 cut(s)	267, 1713
Eco31I	GGTCTC	1 cut(s)	61
Eco32I	GATATC	1 cut(s)	1933
Eco47I	GGWCC	4 cut(s)	31, 449, 1004, 1861
Eco53kI	GAGCTC	1 cut(s)	1711
Eco57I	CTGAAG	1 cut(s)	750
Eco81I	CCTNAGG	1 cut(s)	2284
Eco88I	CYCGRG	2 cut(s)	1015, 1062
EcoICRI	GAGCTC	1 cut(s)	1711
EcoNI	CCTNNNNNAGG	1 cut(s)	1909
EcoRI	GAATTC	2 cut(s)	1661, 1837
EcoRII	CCWGG	3 cut(s)	496, 784, 799
EcoRV	GATATC	1 cut(s)	1933
EcoT14I	CCWWGG	2 cut(s)	1353, 1905
EcoT38I	GRGCYC	2 cut(s)	267, 1713
EgeI	GGCGCC	1 cut(s)	640
EheI	GGCGCC	1 cut(s)	640
ErhI	CCWWGG	2 cut(s)	1353, 1905
FaeI	CATG	5 cut(s)	614, 1375, 1535, 1787, 2225
FalI	AAGNNNNNCTT	6 cut(s)	1318, 1350, 1337, 1369, 1485, 1517
FaqI	GGGAC	3 cut(s)	222, 1013, 2161
FatI	CATG	5 cut(s)	610, 1371, 1531, 1783, 2221
FauI	CCCGC	1 cut(s)	409
FauNDI	CATATG	1 cut(s)	870
FblI	GTMKAC	1 cut(s)	359
FokI	GGATG	3 cut(s)	691, 854, 1484
FriOI	GRGCYC	2 cut(s)	267, 1713
FspBI	CTAG	2 cut(s)	431, 2015
GlaI	GCGC	4 cut(s)	295, 640, 1269, 1284
GsuI	CTGGAG	2 cut(s)	183, 2190
HaeII	RGCGCY	1 cut(s)	642
HaeIII	GGCC	4 cut(s)	1020, 1123, 1352, 1771
HapII	CCGG	6 cut(s)	381, 974, 993, 1016, 1043, 1924
HgaI	GACGC	1 cut(s)	180
HhaI	GCGC	4 cut(s)	296, 641, 1270, 1285
Hin1I	GRCGYC	2 cut(s)	191, 639
Hin1II	CATG	5 cut(s)	614, 1375, 1535, 1787, 2225
Hin6I	GCGC	4 cut(s)	294, 639, 1268, 1283
HinP1I	GCGC	4 cut(s)	294, 639, 1268, 1283
HincII	GTYRAC	3 cut(s)	694, 1216, 2154
HindII	GTYRAC	3 cut(s)	694, 1216, 2154
HpaI	GTTAAC	1 cut(s)	694
HpaII	CCGG	6 cut(s)	381, 974, 993, 1016, 1043, 1924
HphI	GGTGA	7 cut(s)	186, 486, 886, 1165, 1395, 1449, 2161
Hpy188I	TCNGA	6 cut(s)	117, 421, 490, 724, 1450, 1792
HpyAV	CCTTC	9 cut(s)	229, 708, 1135, 1160, 1508, 1626, 1840, 1991, 2260
HpyCH4III	ACNGT	3 cut(s)	754, 1970, 2238
HpyCH4IV	ACGT	3 cut(s)	308, 932, 2110
HpyF3I	CTNAG	9 cut(s)	70, 116, 261, 489, 518, 894, 1789, 2278, 2284
HpySE526I	ACGT	3 cut(s)	308, 932, 2110
Hsp92I	GRCGYC	2 cut(s)	191, 639
Hsp92II	CATG	5 cut(s)	614, 1375, 1535, 1787, 2225
HspAI	GCGC	4 cut(s)	294, 639, 1268, 1283
KasI	GGCGCC	1 cut(s)	638
KspAI	GTTAAC	1 cut(s)	694
Kzo9I	GATC	3 cut(s)	625, 1242, 2269
LguI	GCTCTTC	1 cut(s)	1651
LmnI	GCTCC	2 cut(s)	403, 2052
LweI	GCATC	2 cut(s)	1987, 2008
MabI	ACCWGGT	2 cut(s)	496, 799
MaeI	CTAG	2 cut(s)	431, 2015
MaeII	ACGT	3 cut(s)	308, 932, 2110
MaeIII	GTNAC	8 cut(s)	192, 492, 533, 1010, 1260, 1401, 1919, 1970
MalI	GATC	3 cut(s)	627, 1244, 2271
MbiI	CCGCTC	1 cut(s)	2038
MboI	GATC	3 cut(s)	625, 1242, 2269
MfeI	CAATTG	2 cut(s)	824, 941
MflI	RGATCY	1 cut(s)	2269
MhlI	GDGCHC	3 cut(s)	267, 1713, 2253
MlsI	TGGCCA	1 cut(s)	1771
MluNI	TGGCCA	1 cut(s)	1771
Mly113I	GGCGCC	1 cut(s)	639
MlyI	GAGTC	6 cut(s)	129, 500, 1035, 2116, 2183, 2197
MmeI	TCCRAC	4 cut(s)	835, 1138, 1844, 2074
Mox20I	TGGCCA	1 cut(s)	1771
MscI	TGGCCA	1 cut(s)	1771
MseI	TTAA	6 cut(s)	693, 900, 1368, 1521, 1595, 1875
MslI	CAYNNNNRTG	3 cut(s)	229, 383, 1639
Msp20I	TGGCCA	1 cut(s)	1771
MspA1I	CMGCKG	2 cut(s)	342, 2263
MspI	CCGG	6 cut(s)	381, 974, 993, 1016, 1043, 1924
MspR9I	CCNGG	6 cut(s)	498, 786, 801, 1016, 1017, 1044
MunI	CAATTG	2 cut(s)	824, 941
MvaI	CCWGG	3 cut(s)	498, 786, 801
MvnI	CGCG	3 cut(s)	1139, 1268, 1285
NarI	GGCGCC	1 cut(s)	639
NciI	CCSGG	3 cut(s)	1016, 1017, 1044
NdeI	CATATG	1 cut(s)	870
NdeII	GATC	3 cut(s)	625, 1242, 2269
NlaIII	CATG	5 cut(s)	614, 1375, 1535, 1787, 2225
NlaIV	GGNNCC	4 cut(s)	21, 399, 640, 1006
NmeAIII	GCCGAG	1 cut(s)	2209
NmuCI	GTSAC	5 cut(s)	192, 492, 533, 1401, 1919
OliI	CACNNNNGTG	2 cut(s)	229, 383
PagI	TCATGA	1 cut(s)	610
PceI	AGGCCT	1 cut(s)	1352
PciSI	GCTCTTC	1 cut(s)	1651
PcsI	WCGNNNNNNNCGW	1 cut(s)	1662
PfeI	GAWTC	5 cut(s)	175, 880, 1039, 1505, 1988
PflMI	CCANNNNNTGG	3 cut(s)	458, 554, 1784
PleI	GAGTC	6 cut(s)	128, 499, 1034, 2116, 2182, 2197
PluTI	GGCGCC	1 cut(s)	642
PpsI	GAGTC	6 cut(s)	128, 499, 1034, 2116, 2182, 2197
Psp124BI	GAGCTC	1 cut(s)	1713
Psp6I	CCWGG	3 cut(s)	496, 784, 799
PspGI	CCWGG	3 cut(s)	496, 784, 799
PspN4I	GGNNCC	4 cut(s)	21, 399, 640, 1006
PspPI	GGNCC	5 cut(s)	31, 449, 1004, 1018, 1861
PstI	CTGCAG	1 cut(s)	576
PstNI	CAGNNNCTG	1 cut(s)	1808
PsuI	RGATCY	1 cut(s)	2269
RsaI	GTAC	2 cut(s)	1068, 2042
RsaNI	GTAC	2 cut(s)	1067, 2041
RseI	CAYNNNNRTG	3 cut(s)	229, 383, 1639
SacI	GAGCTC	1 cut(s)	1713
SapI	GCTCTTC	1 cut(s)	1651
SaqAI	TTAA	6 cut(s)	693, 900, 1368, 1521, 1595, 1875
Sau3AI	GATC	3 cut(s)	625, 1242, 2269
Sau96I	GGNCC	5 cut(s)	31, 449, 1004, 1018, 1861
SchI	GAGTC	6 cut(s)	129, 500, 1035, 2116, 2183, 2197
ScrFI	CCNGG	6 cut(s)	498, 786, 801, 1016, 1017, 1044
SduI	GDGCHC	3 cut(s)	267, 1713, 2253
SexAI	ACCWGGT	2 cut(s)	496, 799
SfaNI	GCATC	2 cut(s)	1987, 2008
SfcI	CTRYAG	2 cut(s)	360, 572
SfoI	GGCGCC	1 cut(s)	640
SgrAI	CRCCGGYG	1 cut(s)	380
SinI	GGWCC	4 cut(s)	31, 449, 1004, 1861
SmaI	CCCGGG	1 cut(s)	1017
SmiMI	CAYNNNNRTG	3 cut(s)	229, 383, 1639
SmlI	CTYRAG	3 cut(s)	1680, 1691, 1975
SmoI	CTYRAG	3 cut(s)	1680, 1691, 1975
SseBI	AGGCCT	1 cut(s)	1352
SspDI	GGCGCC	1 cut(s)	638
SspMI	CTAG	2 cut(s)	431, 2015
SstI	GAGCTC	1 cut(s)	1713
StuI	AGGCCT	1 cut(s)	1352
StyD4I	CCNGG	6 cut(s)	496, 784, 799, 1014, 1015, 1042
StyI	CCWWGG	2 cut(s)	1353, 1905
TaaI	ACNGT	3 cut(s)	754, 1970, 2238
TaiI	ACGT	3 cut(s)	311, 935, 2113
TaqI	TCGA	5 cut(s)	279, 1245, 1539, 1665, 1731
TauI	GCSGC	4 cut(s)	345, 398, 1139, 1288
TfiI	GAWTC	5 cut(s)	175, 880, 1039, 1505, 1988
Tru1I	TTAA	6 cut(s)	693, 900, 1368, 1521, 1595, 1875
Tru9I	TTAA	6 cut(s)	693, 900, 1368, 1521, 1595, 1875
TscAI	CASTG	5 cut(s)	265, 933, 1636, 1924, 1973
TseFI	GTSAC	5 cut(s)	192, 492, 533, 1401, 1919
Tsp45I	GTSAC	5 cut(s)	192, 492, 533, 1401, 1919
TspDTI	ATGAA	8 cut(s)	17, 599, 893, 1190, 1199, 1388, 1674, 1772
TspGWI	ACGGA	3 cut(s)	1083, 1248, 2215
TspMI	CCCGGG	1 cut(s)	1015
TspRI	CASTG	5 cut(s)	265, 933, 1636, 1924, 1973
Van91I	CCANNNNNTGG	3 cut(s)	458, 554, 1784
VpaK11BI	GGWCC	4 cut(s)	31, 449, 1004, 1861
XagI	CCTNNNNNAGG	1 cut(s)	1909
XapI	RAATTY	7 cut(s)	83, 670, 726, 745, 855, 1661, 1837
XmaI	CCCGGG	1 cut(s)	1015
XmiI	GTMKAC	1 cut(s)	359
XspI	CTAG	2 cut(s)	431, 2015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.