Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0001402

Physical Location & Seq

Genomic Coordinates Reverse (-)

449807 .. 453415

Gene Structure 3609 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1005500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGAAGCTCTGAGAATTTCATCTCTTCCATCACTGCAACTCCCCTCCAAATTTGACAAATCCCAACCCAAAAAACTTACTTTCTCTGGTTTTAACCCGCAACTCAGTTCACCCTTTTCACCGTTTCAAAGAACCGCATCATCAGCATGCAAGACTTTCAACGCCGTACAATCCTCTGTTTCGACCGAGCCTGCAAACCCACCCGACTTATCACTTGAGAACCCGACCCAAGAGGAGAAATTCGACTGGTACGCCCAATGGTATCCGCTGATGCCCGTTTGTGATCTTGATAAGAGGGTCCCACATGGAAAGAAGGTTTTGGGGATAGACGTGGTGGTGTGGTGGGACCGGAACGAGAGTGCTTGGAAGGTTTTCGATGATGCTTGTCCGCACAGGTTGGCGCCGTTGTCGGAAGGGAGGATTGATCAGTGGGGCAGGTTGCAGTGTGTCTATCATGGTTGGTGTTTTAATGGCTCCGGTGACTGCAAGTTCATCCCTCAAGCACCAACTGATGGCCCTCCGATTCACACGAATAAAAAAACATGTGTAGCTGTTTATCCAACAACGGTGCAGAATGGTATTGTGTGGTTTTGGCCAAATTCCGATCCTCAATACAAAGATGTTCTTGCAGATAAAAAACCTCCCTACATACCCGAACTAGATGATCCATTGTATAGTGGTCCAATGGGAAACAGAGAGATTCCTTACGGGTATGAGGTCTTGATTGAAAATCTTATGGACCCTGCTCATGTTCCATATGCACATTATGGAATATTGCAACCACTGGAAAAACCCAAAGTGAAAGCTGATAGAGAAGGAGGTAAACCATTGGATTTGAGTGTTCAGAAGTTAGACGTAAATGGTTTCATCGCAAAGCAGGAATGGGGTCAGAGTAAATTTTTGCCACCATGTGTGTTCTACGTTTCTCCTCTTGATCCGCTTGAGCAGGGTAATGTGGCTGCATCATCAGCTGAAACCAAAAAGGTGTCATCAGCCCAGGGGCCACTTGTTGTAGTTTTTATTTGCATCCCAGTTAGTCCGGGTAATAGCAGGATGATATGGACCTTACCGGGAAACTTCGGCATATGGGTTGACAGGATTGTTCCGCGGTGGGTGTTTCATATTGGACAAAATCTGATTCTGGACTCCGATTTATATCTTCTTCATGTTGAGGAACGTAAGATAATGGAAGCTGGCCCTGCCCAGTGGCAGAAAGCATGTTTTGTGCCAACAAAGTCAGATGCCCTTGTGGTTGGTTTCAGAAAATGGTTAAACAAGTATGCTGGCGGTCAGGTAGATTGGAGAGGCAAGTTCAGTGGGGCTCTTCCCCCCTCTCCTCCTAGAGAACAGTTGATGGATAGGTACTGGTCCCATGTGGTGAACTGCAGCAGTTGCAGCGCCGGATACAAAGGTCTGAAAGTGCTTGAAGTTGTCTTGCAGGTCGTCGCTCTTTCTTTAGTTGGAATTGTTGCAGCAACCAAGCAGGCTGCCATATCGGTGGCTGCAAGAACTATGCTCGTTGCAGCTGCTGTACTGTCATTCGCAGCTTCAAAATGGTTGGCTCATTTTATCTACAAACAGTTTCACTTTCATGACTACAACCATGCTCTTCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

539

Amino Acids

60.15

Weight (kDa)

8.44

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	86 - 170	1.2e-23	Rieske [2Fe-2S] domain
PaO	PF08417	300 - 399	6.7e-25	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25650 AT4G25650
fragaria_vesca	FvH4_3g45360 FvH4_3g45360 FvH4_3g45360 FvH4_3g45400 FvH4_3g45401 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02730 FvH4_7g02730 FvH4_7g02731
malus_domestica	MD03G1005500.v1.1 MD11G1008100.v1.1 MD11G1008200.v1.1
prunus_persica	Prupe.6G005300_v2.0.a1 Prupe.6G005300_v2.0.a1
pyrus_communis	pycom03g00570 pycom11g00550
rosa_chinensis	RchiOBHm_Chr1g0321981 RchiOBHm_Chr5g0083181 RchiOBHm_Chr5g0083211
rosa_laevigata	RLG00000030397 RLG00000030398 RLG00000037017
rosa_multiflora	Rmu_sc0007027.1_g000001 Rmu_sc0028710.1_g000001 Rmu_sc0041156.1_g000001 Rmu_sc0042838.1_g000001 Rmu_ssc0000026.1_g000007
rosa_roxburghii	Rroxscaffold_1G00001290 Rroxscaffold_4G00327380
rosa_rugosa	Rorug01G0034800 Rorug05G0482900 Rorug05G0483300
rosa_samantha	Rh1AG047700 Rh1CG051800 Rh1CG052000 Rh1CG052100 Rh1DG056000 Rh1DG056200 Rh1DG056300 Rh5AG532500 Rh5AG532700 Rh5BG559700 Rh5DG568400
rosa_wichuraiana	Rw1G004350 Rw5G050050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	426, 1429
AccB1I	GGYRCC	1 cut(s)	400
AccB7I	CCANNNNNTGG	1 cut(s)	512
AccII	CGCG	1 cut(s)	1108
AciI	CCGC	8 cut(s)	98, 135, 266, 389, 938, 1106, 1108, 1287
AclWI	GGATC	3 cut(s)	599, 659, 929
AcoI	YGGCCR	1 cut(s)	593
AcsI	RAATTY	5 cut(s)	15, 50, 239, 598, 896
AcyI	GRCGYC	1 cut(s)	401
AdeI	CACNNNGTG	1 cut(s)	911
AfaI	GTAC	4 cut(s)	168, 251, 1364, 1533
AfiI	CCNNNNNNNGG	1 cut(s)	512
AflIII	ACRYGT	1 cut(s)	542
AgsI	TTSAA	5 cut(s)	128, 160, 728, 1427, 1551
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	1 cut(s)	996
AluBI	AGCT	7 cut(s)	8, 551, 806, 971, 1193, 1526, 1547
AluI	AGCT	7 cut(s)	8, 551, 806, 971, 1193, 1526, 1547
AlwI	GGATC	3 cut(s)	599, 659, 929
AlwNI	CAGNNNCTG	1 cut(s)	1529
AoxI	GGCC	4 cut(s)	514, 593, 1001, 1195
ApeKI	GCWGC	9 cut(s)	959, 1386, 1395, 1472, 1487, 1502, 1523, 1526, 1544
ApoI	RAATTY	5 cut(s)	15, 50, 239, 598, 896
Asp700I	GAANNNNTTC	1 cut(s)	371
AspLEI	GCGC	2 cut(s)	403, 1400
AspS9I	GGNCC	9 cut(s)	298, 346, 515, 680, 739, 1001, 1062, 1196, 1368
AsuC2I	CCSGG	2 cut(s)	1041, 1071
AsuHPI	GGTGA	4 cut(s)	102, 111, 491, 1390
AvaII	GGWCC	6 cut(s)	298, 346, 680, 739, 1062, 1368
BaeI	ACNNNNGTAYC	2 cut(s)	1396, 1429
BalI	TGGCCA	1 cut(s)	595
BanI	GGYRCC	1 cut(s)	400
BanII	GRGCYC	1 cut(s)	1324
BbvI	GCAGC	9 cut(s)	946, 1398, 1407, 1474, 1484, 1489, 1513, 1535, 1556
BccI	CCATC	3 cut(s)	37, 506, 1348
BceAI	ACGGC	2 cut(s)	149, 388
BciT130I	CCWGG	1 cut(s)	998
BciVI	GTATCC	2 cut(s)	273, 1397
BclI	TGATCA	1 cut(s)	424
BcnI	CCSGG	2 cut(s)	1041, 1071
BfaI	CTAG	2 cut(s)	659, 1341
BfmI	CTRYAG	1 cut(s)	1384
BfoI	RGCGCY	2 cut(s)	404, 1401
BfuAI	ACCTGC	2 cut(s)	426, 1429
BfuI	GTATCC	2 cut(s)	273, 1397
BisI	GCNGC	9 cut(s)	960, 1387, 1396, 1473, 1488, 1503, 1524, 1527, 1545
BlsI	GCNGC	9 cut(s)	961, 1388, 1397, 1474, 1489, 1504, 1525, 1528, 1546
Bme1390I	CCNGG	3 cut(s)	998, 1041, 1071
Bme18I	GGWCC	6 cut(s)	298, 346, 680, 739, 1062, 1368
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	9 cut(s)	298, 346, 515, 680, 739, 1001, 1062, 1196, 1368
BmiI	GGNNCC	8 cut(s)	299, 300, 347, 402, 475, 741, 1002, 1370
BmrFI	CCNGG	3 cut(s)	998, 1041, 1071
BmrI	ACTGGG	2 cut(s)	1025, 1198
BmsI	GCATC	6 cut(s)	146, 261, 370, 971, 1035, 1231
BmuI	ACTGGG	2 cut(s)	1025, 1198
BpuEI	CTTGAG	3 cut(s)	236, 483, 962
BpuMI	CCSGG	2 cut(s)	1041, 1071
BsaBI	GATNNNNATC	1 cut(s)	1155
BsaHI	GRCGYC	1 cut(s)	401
BsaJI	CCNNGG	3 cut(s)	996, 997, 1106
BsaWI	WCCGGW	2 cut(s)	348, 476
BsaXI	ACNNNNNCTCC	2 cut(s)	24, 54
Bsc4I	CCNNNNNNNGG	1 cut(s)	512
Bse1I	ACTGG	5 cut(s)	251, 789, 1031, 1204, 1370
Bse8I	GATNNNNATC	1 cut(s)	1155
BseBI	CCWGG	1 cut(s)	998
BseDI	CCNNGG	3 cut(s)	996, 997, 1106
BseGI	GGATG	3 cut(s)	492, 1026, 1059
BseJI	GATNNNNATC	1 cut(s)	1155
BseLI	CCNNNNNNNGG	1 cut(s)	512
BseMII	CTCAG	1 cut(s)	118
BseNI	ACTGG	5 cut(s)	251, 789, 1031, 1204, 1370
BseRI	GAGGAG	3 cut(s)	248, 918, 1326
BseXI	GCAGC	9 cut(s)	946, 1398, 1407, 1474, 1484, 1489, 1513, 1535, 1556
BsgI	GTGCAG	1 cut(s)	590
Bsh1236I	CGCG	1 cut(s)	1108
Bsh1285I	CGRYCG	1 cut(s)	186
BshFI	GGCC	4 cut(s)	516, 595, 1003, 1197
BshNI	GGYRCC	1 cut(s)	400
BsiEI	CGRYCG	1 cut(s)	186
BsiSI	CCGG	5 cut(s)	349, 477, 1040, 1070, 1401
BslFI	GGGAC	3 cut(s)	284, 359, 1354
BslI	CCNNNNNNNGG	1 cut(s)	512
BsmFI	GGGAC	3 cut(s)	284, 359, 1354
BsnI	GGCC	4 cut(s)	516, 595, 1003, 1197
Bsp1286I	GDGCHC	1 cut(s)	1324
Bsp143I	GATC	5 cut(s)	283, 424, 604, 664, 934
BspACI	CCGC	8 cut(s)	98, 135, 266, 389, 938, 1106, 1108, 1287
BspANI	GGCC	4 cut(s)	516, 595, 1003, 1197
BspCNI	CTCAG	1 cut(s)	117
BspFNI	CGCG	1 cut(s)	1108
BspHI	TCATGA	1 cut(s)	1591
BspLI	GGNNCC	8 cut(s)	299, 300, 347, 402, 475, 741, 1002, 1370
BspMAI	CTGCAG	1 cut(s)	1388
BspMI	ACCTGC	2 cut(s)	426, 1429
BspPI	GGATC	3 cut(s)	599, 659, 929
BspQI	GCTCTTC	2 cut(s)	1329, 1614
BspT107I	GGYRCC	1 cut(s)	400
BsrI	ACTGG	5 cut(s)	251, 789, 1031, 1204, 1370
BssECI	CCNNGG	3 cut(s)	996, 997, 1106
BssMI	GATC	5 cut(s)	283, 424, 604, 664, 934
BssNI	GRCGYC	1 cut(s)	401
Bst2UI	CCWGG	1 cut(s)	998
Bst4CI	ACNGT	5 cut(s)	123, 568, 1350, 1536, 1581
Bst6I	CTCTTC	3 cut(s)	30, 1329, 1614
BstACI	GRCGYC	1 cut(s)	401
BstAPI	GCANNNNNTGC	1 cut(s)	1392
BstC8I	GCNNGC	5 cut(s)	148, 192, 1195, 1285, 1485
BstDEI	CTNAG	2 cut(s)	11, 104
BstDSI	CCRYGG	1 cut(s)	1106
BstF5I	GGATG	3 cut(s)	492, 1026, 1059
BstFNI	CGCG	1 cut(s)	1108
BstH2I	RGCGCY	2 cut(s)	404, 1401
BstHHI	GCGC	2 cut(s)	403, 1400
BstKTI	GATC	5 cut(s)	286, 427, 607, 667, 937
BstMBI	GATC	5 cut(s)	283, 424, 604, 664, 934
BstMCI	CGRYCG	1 cut(s)	186
BstMWI	GCNNNNNNNGC	5 cut(s)	143, 968, 1199, 1392, 1395
BstNI	CCWGG	1 cut(s)	998
BstNSI	RCATGY	3 cut(s)	150, 546, 1221
BstSCI	CCNGG	3 cut(s)	996, 1039, 1069
BstSFI	CTRYAG	1 cut(s)	1384
BstUI	CGCG	1 cut(s)	1108
BstV1I	GCAGC	9 cut(s)	946, 1398, 1407, 1474, 1484, 1489, 1513, 1535, 1556
BstXI	CCANNNNNNTGG	1 cut(s)	1498
BsuI	GTATCC	2 cut(s)	273, 1397
BsuRI	GGCC	4 cut(s)	516, 595, 1003, 1197
BtgI	CCRYGG	1 cut(s)	1106
BtgZI	GCGATG	1 cut(s)	853
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	3 cut(s)	492, 1026, 1059
BtsI	GCAGTG	2 cut(s)	32, 449
BtsIMutI	CAGTG	6 cut(s)	32, 434, 449, 782, 1211, 1321
BveI	ACCTGC	2 cut(s)	426, 1429
Cac8I	GCNNGC	5 cut(s)	148, 192, 1195, 1285, 1485
CaiI	CAGNNNCTG	1 cut(s)	1529
CciI	TCATGA	1 cut(s)	1591
CfoI	GCGC	2 cut(s)	403, 1400
Cfr13I	GGNCC	9 cut(s)	298, 346, 515, 680, 739, 1001, 1062, 1196, 1368
Cfr42I	CCGCGG	1 cut(s)	1109
Csp6I	GTAC	4 cut(s)	167, 250, 1363, 1532
CspCI	CAANNNNNGTGG	2 cut(s)	1297, 1332
CviQI	GTAC	4 cut(s)	167, 250, 1363, 1532
DdeI	CTNAG	2 cut(s)	11, 104
DinI	GGCGCC	1 cut(s)	402
DpnI	GATC	5 cut(s)	285, 426, 606, 666, 936
DpnII	GATC	5 cut(s)	283, 424, 604, 664, 934
DraIII	CACNNNGTG	1 cut(s)	911
EaeI	YGGCCR	1 cut(s)	593
Eam1104I	CTCTTC	3 cut(s)	30, 1329, 1614
EarI	CTCTTC	3 cut(s)	30, 1329, 1614
Eco24I	GRGCYC	1 cut(s)	1324
Eco47I	GGWCC	6 cut(s)	298, 346, 680, 739, 1062, 1368
EcoO109I	RGGNCCY	1 cut(s)	298
EcoRII	CCWGG	1 cut(s)	996
EcoT38I	GRGCYC	1 cut(s)	1324
EgeI	GGCGCC	1 cut(s)	402
EheI	GGCGCC	1 cut(s)	402
FalI	AAGNNNNNCTT	2 cut(s)	609, 641
FaqI	GGGAC	3 cut(s)	284, 359, 1354
FauI	CCCGC	1 cut(s)	105
FauNDI	CATATG	2 cut(s)	757, 1085
FbaI	TGATCA	1 cut(s)	424
Fnu4HI	GCNGC	9 cut(s)	960, 1387, 1396, 1473, 1488, 1503, 1524, 1527, 1545
FokI	GGATG	3 cut(s)	479, 1013, 1066
FriOI	GRGCYC	1 cut(s)	1324
Fsp4HI	GCNGC	9 cut(s)	960, 1387, 1396, 1473, 1488, 1503, 1524, 1527, 1545
FspBI	CTAG	2 cut(s)	659, 1341
GlaI	GCGC	2 cut(s)	402, 1399
GluI	GCNGC	9 cut(s)	960, 1387, 1396, 1473, 1488, 1503, 1524, 1527, 1545
HaeII	RGCGCY	2 cut(s)	404, 1401
HaeIII	GGCC	4 cut(s)	516, 595, 1003, 1197
HapII	CCGG	5 cut(s)	349, 477, 1040, 1070, 1401
HhaI	GCGC	2 cut(s)	403, 1400
Hin1I	GRCGYC	1 cut(s)	401
Hin6I	GCGC	2 cut(s)	401, 1398
HinP1I	GCGC	2 cut(s)	401, 1398
HincII	GTYRAC	1 cut(s)	1093
HindII	GTYRAC	1 cut(s)	1093
HinfI	GANTC	4 cut(s)	523, 700, 1138, 1145
HpaII	CCGG	5 cut(s)	349, 477, 1040, 1070, 1401
HphI	GGTGA	4 cut(s)	102, 111, 491, 1390
Hpy166II	GTNNAC	4 cut(s)	110, 824, 1093, 1381
Hpy188III	TCNNGA	5 cut(s)	287, 721, 932, 1142, 1592
Hpy8I	GTNNAC	4 cut(s)	110, 824, 1093, 1381
Hpy99I	CGWCG	1 cut(s)	1448
HpyAV	CCTTC	4 cut(s)	307, 361, 407, 809
HpyCH4III	ACNGT	5 cut(s)	123, 568, 1350, 1536, 1581
HpyCH4IV	ACGT	4 cut(s)	330, 855, 921, 1177
HpyF10VI	GCNNNNNNNGC	5 cut(s)	143, 968, 1199, 1392, 1395
HpyF3I	CTNAG	2 cut(s)	11, 104
HpySE526I	ACGT	4 cut(s)	330, 855, 921, 1177
Hsp92I	GRCGYC	1 cut(s)	401
HspAI	GCGC	2 cut(s)	401, 1398
KasI	GGCGCC	1 cut(s)	400
KflI	GGGWCCC	1 cut(s)	298
Ksp22I	TGATCA	1 cut(s)	424
KspI	CCGCGG	1 cut(s)	1109
Kzo9I	GATC	5 cut(s)	283, 424, 604, 664, 934
LguI	GCTCTTC	2 cut(s)	1329, 1614
LmnI	GCTCC	1 cut(s)	479
Lsp1109I	GCAGC	9 cut(s)	946, 1398, 1407, 1474, 1484, 1489, 1513, 1535, 1556
LweI	GCATC	6 cut(s)	146, 261, 370, 971, 1035, 1231
MaeI	CTAG	2 cut(s)	659, 1341
MaeII	ACGT	4 cut(s)	330, 855, 921, 1177
MaeIII	GTNAC	1 cut(s)	479
MalI	GATC	5 cut(s)	285, 426, 606, 666, 936
MboI	GATC	5 cut(s)	283, 424, 604, 664, 934
MboII	GAAGA	5 cut(s)	17, 1151, 1154, 1316, 1601
MhlI	GDGCHC	1 cut(s)	1324
MlsI	TGGCCA	1 cut(s)	595
MluCI	AATT	6 cut(s)	15, 50, 239, 598, 896, 1464
MluNI	TGGCCA	1 cut(s)	595
Mly113I	GGCGCC	1 cut(s)	401
MlyI	GAGTC	1 cut(s)	1139
MmeI	TCCRAC	3 cut(s)	390, 584, 1441
Mox20I	TGGCCA	1 cut(s)	595
MroXI	GAANNNNTTC	1 cut(s)	371
MscI	TGGCCA	1 cut(s)	595
MseI	TTAA	3 cut(s)	93, 468, 1271
MslI	CAYNNNNRTG	3 cut(s)	145, 1496, 1590
Msp20I	TGGCCA	1 cut(s)	595
MspA1I	CMGCKG	4 cut(s)	268, 971, 1108, 1526
MspI	CCGG	5 cut(s)	349, 477, 1040, 1070, 1401
MspR9I	CCNGG	3 cut(s)	998, 1041, 1071
MvaI	CCWGG	1 cut(s)	998
MvnI	CGCG	1 cut(s)	1108
MwoI	GCNNNNNNNGC	5 cut(s)	143, 968, 1199, 1392, 1395
NarI	GGCGCC	1 cut(s)	401
NciI	CCSGG	2 cut(s)	1041, 1071
NdeI	CATATG	2 cut(s)	757, 1085
NdeII	GATC	5 cut(s)	283, 424, 604, 664, 934
NlaIV	GGNNCC	8 cut(s)	299, 300, 347, 402, 475, 741, 1002, 1370
NmuCI	GTSAC	1 cut(s)	479
NspI	RCATGY	3 cut(s)	150, 546, 1221
PaeI	GCATGC	1 cut(s)	150
PagI	TCATGA	1 cut(s)	1591
PasI	CCCWGGG	1 cut(s)	997
PciI	ACATGT	1 cut(s)	542
PciSI	GCTCTTC	2 cut(s)	1329, 1614
PdmI	GAANNNNTTC	1 cut(s)	371
PfeI	GAWTC	3 cut(s)	523, 700, 1138
PflMI	CCANNNNNTGG	1 cut(s)	512
PkrI	GCNGC	9 cut(s)	961, 1388, 1397, 1474, 1489, 1504, 1525, 1528, 1546
PleI	GAGTC	1 cut(s)	1139
PluTI	GGCGCC	1 cut(s)	404
PpsI	GAGTC	1 cut(s)	1139
PpuMI	RGGWCCY	1 cut(s)	298
PscI	ACATGT	1 cut(s)	542
Psp5II	RGGWCCY	1 cut(s)	298
Psp6I	CCWGG	1 cut(s)	996
PspGI	CCWGG	1 cut(s)	996
PspN4I	GGNNCC	8 cut(s)	299, 300, 347, 402, 475, 741, 1002, 1370
PspPI	GGNCC	9 cut(s)	298, 346, 515, 680, 739, 1001, 1062, 1196, 1368
PspPPI	RGGWCCY	1 cut(s)	298
PstI	CTGCAG	1 cut(s)	1388
PstNI	CAGNNNCTG	1 cut(s)	1529
PvuII	CAGCTG	2 cut(s)	971, 1526
RsaI	GTAC	4 cut(s)	168, 251, 1364, 1533
RsaNI	GTAC	4 cut(s)	167, 250, 1363, 1532
RseI	CAYNNNNRTG	3 cut(s)	145, 1496, 1590
SacII	CCGCGG	1 cut(s)	1109
SapI	GCTCTTC	2 cut(s)	1329, 1614
SaqAI	TTAA	3 cut(s)	93, 468, 1271
SatI	GCNGC	9 cut(s)	960, 1387, 1396, 1473, 1488, 1503, 1524, 1527, 1545
Sau3AI	GATC	5 cut(s)	283, 424, 604, 664, 934
Sau96I	GGNCC	9 cut(s)	298, 346, 515, 680, 739, 1001, 1062, 1196, 1368
SchI	GAGTC	1 cut(s)	1139
ScrFI	CCNGG	3 cut(s)	998, 1041, 1071
SduI	GDGCHC	1 cut(s)	1324
SfaNI	GCATC	6 cut(s)	146, 261, 370, 971, 1035, 1231
SfcI	CTRYAG	1 cut(s)	1384
SfoI	GGCGCC	1 cut(s)	402
Sfr303I	CCGCGG	1 cut(s)	1109
SgrBI	CCGCGG	1 cut(s)	1109
SinI	GGWCC	6 cut(s)	298, 346, 680, 739, 1062, 1368
SmiMI	CAYNNNNRTG	3 cut(s)	145, 1496, 1590
SmlI	CTYRAG	3 cut(s)	215, 498, 941
SmoI	CTYRAG	3 cut(s)	215, 498, 941
SphI	GCATGC	1 cut(s)	150
Sse9I	AATT	6 cut(s)	15, 50, 239, 598, 896, 1464
SsiI	CCGC	8 cut(s)	98, 135, 266, 389, 938, 1106, 1108, 1287
SspDI	GGCGCC	1 cut(s)	400
SspI	AATATT	1 cut(s)	774
SspMI	CTAG	2 cut(s)	659, 1341
StyD4I	CCNGG	3 cut(s)	996, 1039, 1069
TaaI	ACNGT	5 cut(s)	123, 568, 1350, 1536, 1581
TaiI	ACGT	4 cut(s)	333, 858, 924, 1180
TaqI	TCGA	3 cut(s)	182, 243, 375
TaqII	GACCGA	1 cut(s)	200
TasI	AATT	6 cut(s)	15, 50, 239, 598, 896, 1464
TatI	WGTACW	1 cut(s)	1531
TfiI	GAWTC	3 cut(s)	523, 700, 1138
Tru1I	TTAA	3 cut(s)	93, 468, 1271
Tru9I	TTAA	3 cut(s)	93, 468, 1271
TscAI	CASTG	6 cut(s)	39, 434, 449, 789, 1211, 1321
TseFI	GTSAC	1 cut(s)	479
TseI	GCWGC	9 cut(s)	959, 1386, 1395, 1472, 1487, 1502, 1523, 1526, 1544
Tsp45I	GTSAC	1 cut(s)	479
TspDTI	ATGAA	6 cut(s)	9, 481, 856, 1109, 1154, 1580
TspRI	CASTG	6 cut(s)	39, 434, 449, 789, 1211, 1321
Van91I	CCANNNNNTGG	1 cut(s)	512
VpaK11BI	GGWCC	6 cut(s)	298, 346, 680, 739, 1062, 1368
XapI	RAATTY	5 cut(s)	15, 50, 239, 598, 896
XceI	RCATGY	3 cut(s)	150, 546, 1221
XmnI	GAANNNNTTC	1 cut(s)	371
XspI	CTAG	2 cut(s)	659, 1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.