Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0001402

Physical Location & Seq

Genomic Coordinates Reverse (-)

706960 .. 710715

Gene Structure 3756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1008200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGAAGCTCTGAGAATTTCATCTCTTCCCTCACCGCAATTTCCTACCAAATTTGACGAATCCCAACCCAAAAAACTTACCATCTCAGGATTTAACCCATACCCCACTTCGTCTTTTTCACCGTTGAAAGGAACCGCGTCATCAGCGTTCAAGACTTTCACCGCCGTACAATCCTCTGTTTCGACCGAGCCTGCAAACCCACCCGACCCATCACTCGAAAACCCGACCCAGGAGGAGAAATTCGACTGGTACGCCCAATGGTATCCGTTGATGCCGGTTTGCGATCTCGATAAGAGGGTCCCGCATGGAAAGAAGGTTTTGGGGATAGACGTGGTGGTGTGGTGGGACCGGAACGAGAGTGCTTGGAAGGTGTTCGATGATGCTTGTCCCCACAGGTTGGCGCCGTTGTCGGAAGGGAGGATTGATCAGTGGGGCAGGTTGCAGTGCGTCTATCACGGTTGGTGTTTTAATGGCTCCGGTGACTGCAAGTTCATCCCTCAAGCACCAACTGATGGCCCTCCGATTCACACGAATAAGAAAGCATGTGTAGCCGCTTATCCAACAACTGTGCAGAATGGCATTGTGTGGTTTTGGCCAAATTCCGATCCTCAATACAAAGATGTTCTTGCAGAGAAAAAACCTCCCTACATACCTGAACTAGATGATCCATCGTATAGTGGTCCAATGGGAAACAGAGAGATTCCTTACGGGTACGAGGTCTTGATTGAAAATCTTATGGACCCTGCTCATGTTCCATATGCGCATTATGGAATAATGCAAATGAGACAACCCAAAGAGAAAGCTGATAGAGAAGGGGGTAGACCATTGGATTTGAGAGTTGAGAAGTTAGACATAAATGGTTTCATCGCAAAGCAGGAATGGGGTTGGAGTAAATTTTTGCCACCATGTGTATTCTACGGTACTCCACTTGATCCACTTGAGCAGGGTAATGGGGCTGCATCATCAGCTGAAACCAAAAAGGTGTCATCAGCCCAGCGGAGAAGTCTTCTAATTTTTATTTGTATCCCAGTTAGTCCGGGTAATAGCAGGTTGATATCGACCTTCCCAAGAAACTTCGGCATTTGGATTGATAAGATTGTTCCGCGGTGGATGTTTCATATTGGACAAAATCTGGTTCTGGACTCCGATATATATCTTCTTCATGTTGAGGAACGTAAGATAATGGAAGCTGGCCCTGCCCAGTGGCAAAAAGCATGTTTTGTGCCAACAAAGTCAGATGCCCTTGTGGTTGGTTTCAGAAAATGGTTAAACAAGTACGCTGGCGGTCAGGTAGATTGGAGAGGCAAGTTCAGTGGGGCTCTTCCCCCCACTCCTCCTAGAGAACAGTTGCTGGACAGGTACTGGTCCCATGTGGTAAACTGCAGCAGTTGCAGTGCCGGATACAAAGGTCTGAAAGTGCTCGAAGTTGTATTGCAGTTTGCCGCTTTTGCTGTAGTGGGAATTGTTGCTGCAACCAAGCAGGCTGCCATATCAGTGGCTGCAAGAACTACGCTCGTTGCAGCAGCTATACTATCATTTGCAGCTTCAAAATGGTTGGCATACTTTATCTACAAACAGTTTCACTTTCATGACTACAACCATGCTTTCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

538

Amino Acids

60.34

Weight (kDa)

8.58

Isoelectric Point (pI)

40.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	86 - 170	1.3e-23	Rieske [2Fe-2S] domain
PaO	PF08417	299 - 398	1.8e-26	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25650 AT4G25650
fragaria_vesca	FvH4_3g45360 FvH4_3g45360 FvH4_3g45360 FvH4_3g45400 FvH4_3g45401 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02720 FvH4_7g02730 FvH4_7g02730 FvH4_7g02731
malus_domestica	MD03G1005500.v1.1 MD11G1008100.v1.1 MD11G1008200.v1.1
prunus_persica	Prupe.6G005300_v2.0.a1 Prupe.6G005300_v2.0.a1
pyrus_communis	pycom03g00570 pycom11g00550
rosa_chinensis	RchiOBHm_Chr1g0321981 RchiOBHm_Chr5g0083181 RchiOBHm_Chr5g0083211
rosa_laevigata	RLG00000030397 RLG00000030398 RLG00000037017
rosa_multiflora	Rmu_sc0007027.1_g000001 Rmu_sc0028710.1_g000001 Rmu_sc0041156.1_g000001 Rmu_sc0042838.1_g000001 Rmu_ssc0000026.1_g000007
rosa_roxburghii	Rroxscaffold_1G00001290 Rroxscaffold_4G00327380
rosa_rugosa	Rorug01G0034800 Rorug05G0482900 Rorug05G0483300
rosa_samantha	Rh1AG047700 Rh1CG051800 Rh1CG052000 Rh1CG052100 Rh1DG056000 Rh1DG056200 Rh1DG056300 Rh5AG532500 Rh5AG532700 Rh5BG559700 Rh5DG568400
rosa_wichuraiana	Rw1G004350 Rw5G050050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	762
Acc36I	ACCTGC	2 cut(s)	426, 1038
AccB1I	GGYRCC	1 cut(s)	400
AccB7I	CCANNNNNTGG	2 cut(s)	397, 512
AccI	GTMKAC	1 cut(s)	820
AccII	CGCG	2 cut(s)	137, 1105
AclWI	GGATC	3 cut(s)	599, 659, 926
AcoI	YGGCCR	1 cut(s)	593
AcsI	RAATTY	5 cut(s)	15, 50, 239, 598, 893
AcyI	GRCGYC	1 cut(s)	401
AdeI	CACNNNGTG	1 cut(s)	908
AfaI	GTAC	6 cut(s)	168, 251, 713, 922, 1277, 1361
AfiI	CCNNNNNNNGG	4 cut(s)	128, 229, 397, 512
AgsI	TTSAA	4 cut(s)	127, 151, 728, 1548
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	1 cut(s)	228
AluBI	AGCT	6 cut(s)	8, 803, 968, 1190, 1526, 1544
AluI	AGCT	6 cut(s)	8, 803, 968, 1190, 1526, 1544
Alw21I	GWGCWC	1 cut(s)	1422
Alw26I	GTCTC	1 cut(s)	778
AlwI	GGATC	3 cut(s)	599, 659, 926
AlwNI	CAGNNNCTG	3 cut(s)	1351, 1362, 1499
AoxI	GGCC	3 cut(s)	514, 593, 1192
ApeKI	GCWGC	8 cut(s)	956, 1383, 1469, 1484, 1499, 1520, 1523, 1541
ApoI	RAATTY	5 cut(s)	15, 50, 239, 598, 893
Asp700I	GAANNNNTTC	1 cut(s)	371
AspLEI	GCGC	2 cut(s)	403, 763
AspS9I	GGNCC	7 cut(s)	298, 346, 515, 680, 739, 1193, 1365
AsuC2I	CCSGG	1 cut(s)	1038
AsuHPI	GGTGA	4 cut(s)	24, 111, 151, 491
AvaII	GGWCC	5 cut(s)	298, 346, 680, 739, 1365
BaeI	ACNNNNGTAYC	2 cut(s)	1393, 1426
BalI	TGGCCA	1 cut(s)	595
BanI	GGYRCC	1 cut(s)	400
BanII	GRGCYC	1 cut(s)	1321
BbsI	GAAGAC	1 cut(s)	998
Bbv12I	GWGCWC	1 cut(s)	1422
BbvI	GCAGC	8 cut(s)	943, 1395, 1456, 1471, 1486, 1532, 1535, 1553
BccI	CCATC	4 cut(s)	89, 217, 506, 676
BceAI	ACGGC	2 cut(s)	149, 388
BciT130I	CCWGG	1 cut(s)	230
BciVI	GTATCC	3 cut(s)	273, 1034, 1394
BclI	TGATCA	1 cut(s)	424
BcnI	CCSGG	1 cut(s)	1038
BcoDI	GTCTC	1 cut(s)	778
BfaI	CTAG	2 cut(s)	659, 1338
BfmI	CTRYAG	2 cut(s)	1381, 1452
BfoI	RGCGCY	1 cut(s)	404
BfuAI	ACCTGC	2 cut(s)	426, 1038
BfuI	GTATCC	3 cut(s)	273, 1034, 1394
Bme1390I	CCNGG	2 cut(s)	230, 1038
Bme18I	GGWCC	5 cut(s)	298, 346, 680, 739, 1365
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	7 cut(s)	298, 346, 515, 680, 739, 1193, 1365
BmiI	GGNNCC	8 cut(s)	133, 299, 300, 347, 402, 475, 741, 1367
BmrFI	CCNGG	2 cut(s)	230, 1038
BmrI	ACTGGG	2 cut(s)	1022, 1195
BmsI	GCATC	4 cut(s)	261, 370, 968, 1228
BmuI	ACTGGG	2 cut(s)	1022, 1195
BpiI	GAAGAC	1 cut(s)	998
BpuEI	CTTGAG	2 cut(s)	483, 959
BpuMI	CCSGG	1 cut(s)	1038
BsaBI	GATNNNNATC	1 cut(s)	1152
BsaHI	GRCGYC	1 cut(s)	401
BsaJI	CCNNGG	2 cut(s)	228, 1103
BsaWI	WCCGGW	3 cut(s)	348, 476, 1608
Bsc4I	CCNNNNNNNGG	4 cut(s)	128, 229, 397, 512
Bse118I	RCCGGY	1 cut(s)	274
Bse1I	ACTGG	4 cut(s)	251, 1028, 1201, 1367
Bse8I	GATNNNNATC	1 cut(s)	1152
BseBI	CCWGG	1 cut(s)	230
BseDI	CCNNGG	2 cut(s)	228, 1103
BseGI	GGATG	2 cut(s)	492, 1116
BseJI	GATNNNNATC	1 cut(s)	1152
BseLI	CCNNNNNNNGG	4 cut(s)	128, 229, 397, 512
BseMII	CTCAG	1 cut(s)	99
BseNI	ACTGG	4 cut(s)	251, 1028, 1201, 1367
BseRI	GAGGAG	2 cut(s)	248, 1323
BseXI	GCAGC	8 cut(s)	943, 1395, 1456, 1471, 1486, 1532, 1535, 1553
BseYI	CCCAGC	1 cut(s)	993
BsgI	GTGCAG	1 cut(s)	590
Bsh1236I	CGCG	2 cut(s)	137, 1105
Bsh1285I	CGRYCG	1 cut(s)	186
BshFI	GGCC	3 cut(s)	516, 595, 1194
BshNI	GGYRCC	1 cut(s)	400
BsiEI	CGRYCG	1 cut(s)	186
BsiHKAI	GWGCWC	1 cut(s)	1422
BsiSI	CCGG	6 cut(s)	275, 349, 477, 1037, 1398, 1609
BslFI	GGGAC	4 cut(s)	284, 359, 372, 1351
BslI	CCNNNNNNNGG	4 cut(s)	128, 229, 397, 512
BsmAI	GTCTC	1 cut(s)	778
BsmFI	GGGAC	4 cut(s)	284, 359, 372, 1351
BsnI	GGCC	3 cut(s)	516, 595, 1194
Bsp1286I	GDGCHC	2 cut(s)	1321, 1422
Bsp143I	GATC	5 cut(s)	283, 424, 604, 664, 931
BspANI	GGCC	3 cut(s)	516, 595, 1194
BspCNI	CTCAG	1 cut(s)	98
BspFNI	CGCG	2 cut(s)	137, 1105
BspHI	TCATGA	1 cut(s)	1588
BspLI	GGNNCC	8 cut(s)	133, 299, 300, 347, 402, 475, 741, 1367
BspMAI	CTGCAG	1 cut(s)	1385
BspMI	ACCTGC	2 cut(s)	426, 1038
BspPI	GGATC	3 cut(s)	599, 659, 926
BspQI	GCTCTTC	1 cut(s)	1326
BspT107I	GGYRCC	1 cut(s)	400
BsrFI	RCCGGY	1 cut(s)	274
BsrI	ACTGG	4 cut(s)	251, 1028, 1201, 1367
BssAI	RCCGGY	1 cut(s)	274
BssECI	CCNNGG	2 cut(s)	228, 1103
BssMI	GATC	5 cut(s)	283, 424, 604, 664, 931
BssNI	GRCGYC	1 cut(s)	401
Bst2UI	CCWGG	1 cut(s)	230
Bst4CI	ACNGT	6 cut(s)	123, 458, 568, 920, 1347, 1578
Bst6I	CTCTTC	2 cut(s)	30, 1326
BstACI	GRCGYC	1 cut(s)	401
BstAPI	GCANNNNNTGC	1 cut(s)	1389
BstC8I	GCNNGC	4 cut(s)	192, 1192, 1282, 1482
BstDEI	CTNAG	2 cut(s)	11, 85
BstDSI	CCRYGG	1 cut(s)	1103
BstF5I	GGATG	2 cut(s)	492, 1116
BstFNI	CGCG	2 cut(s)	137, 1105
BstH2I	RGCGCY	1 cut(s)	404
BstHHI	GCGC	2 cut(s)	403, 763
BstKTI	GATC	5 cut(s)	286, 427, 607, 667, 934
BstMAI	GTCTC	1 cut(s)	778
BstMBI	GATC	5 cut(s)	283, 424, 604, 664, 931
BstMCI	CGRYCG	1 cut(s)	186
BstMWI	GCNNNNNNNGC	6 cut(s)	143, 548, 965, 1196, 1389, 1448
BstNI	CCWGG	1 cut(s)	230
BstNSI	RCATGY	2 cut(s)	546, 1218
BstSCI	CCNGG	2 cut(s)	228, 1036
BstSFI	CTRYAG	2 cut(s)	1381, 1452
BstUI	CGCG	2 cut(s)	137, 1105
BstV1I	GCAGC	8 cut(s)	943, 1395, 1456, 1471, 1486, 1532, 1535, 1553
BstV2I	GAAGAC	1 cut(s)	998
BstXI	CCANNNNNNTGG	1 cut(s)	1495
BsuI	GTATCC	3 cut(s)	273, 1034, 1394
BsuRI	GGCC	3 cut(s)	516, 595, 1194
BtgI	CCRYGG	1 cut(s)	1103
BtgZI	GCGATG	1 cut(s)	850
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	2 cut(s)	492, 1116
BtsI	GCAGTG	2 cut(s)	449, 1399
BtsIMutI	CAGTG	6 cut(s)	434, 449, 1208, 1318, 1399, 1500
BveI	ACCTGC	2 cut(s)	426, 1038
Cac8I	GCNNGC	4 cut(s)	192, 1192, 1282, 1482
CaiI	CAGNNNCTG	3 cut(s)	1351, 1362, 1499
CciI	TCATGA	1 cut(s)	1588
CfoI	GCGC	2 cut(s)	403, 763
Cfr10I	RCCGGY	1 cut(s)	274
Cfr13I	GGNCC	7 cut(s)	298, 346, 515, 680, 739, 1193, 1365
Cfr42I	CCGCGG	1 cut(s)	1106
CseI	GACGC	2 cut(s)	126, 436
Csp6I	GTAC	6 cut(s)	167, 250, 712, 921, 1276, 1360
CspCI	CAANNNNNGTGG	2 cut(s)	1294, 1329
CviAII	CATG	9 cut(s)	305, 543, 749, 906, 1163, 1215, 1370, 1589, 1601
CviQI	GTAC	6 cut(s)	167, 250, 712, 921, 1276, 1360
DdeI	CTNAG	2 cut(s)	11, 85
DinI	GGCGCC	1 cut(s)	402
DpnI	GATC	5 cut(s)	285, 426, 606, 666, 933
DpnII	GATC	5 cut(s)	283, 424, 604, 664, 931
DraIII	CACNNNGTG	1 cut(s)	908
EaeI	YGGCCR	1 cut(s)	593
Eam1104I	CTCTTC	2 cut(s)	30, 1326
EarI	CTCTTC	2 cut(s)	30, 1326
Eco24I	GRGCYC	1 cut(s)	1321
Eco32I	GATATC	1 cut(s)	1056
Eco47I	GGWCC	5 cut(s)	298, 346, 680, 739, 1365
EcoO109I	RGGNCCY	1 cut(s)	298
EcoRII	CCWGG	1 cut(s)	228
EcoRV	GATATC	1 cut(s)	1056
EcoT38I	GRGCYC	1 cut(s)	1321
EgeI	GGCGCC	1 cut(s)	402
EheI	GGCGCC	1 cut(s)	402
FaeI	CATG	9 cut(s)	308, 546, 752, 909, 1166, 1218, 1373, 1592, 1604
FalI	AAGNNNNNCTT	2 cut(s)	609, 641
FaqI	GGGAC	4 cut(s)	284, 359, 372, 1351
FatI	CATG	9 cut(s)	304, 542, 748, 905, 1162, 1214, 1369, 1588, 1600
FauI	CCCGC	1 cut(s)	309
FauNDI	CATATG	1 cut(s)	757
FbaI	TGATCA	1 cut(s)	424
FblI	GTMKAC	1 cut(s)	820
FokI	GGATG	2 cut(s)	479, 1123
FriOI	GRGCYC	1 cut(s)	1321
FspAI	RTGCGCAY	1 cut(s)	762
FspBI	CTAG	2 cut(s)	659, 1338
FspI	TGCGCA	1 cut(s)	762
GlaI	GCGC	2 cut(s)	402, 762
GsaI	CCCAGC	1 cut(s)	997
HaeII	RGCGCY	1 cut(s)	404
HaeIII	GGCC	3 cut(s)	516, 595, 1194
HapII	CCGG	6 cut(s)	275, 349, 477, 1037, 1398, 1609
HgaI	GACGC	2 cut(s)	126, 436
HhaI	GCGC	2 cut(s)	403, 763
Hin1I	GRCGYC	1 cut(s)	401
Hin1II	CATG	9 cut(s)	308, 546, 752, 909, 1166, 1218, 1373, 1592, 1604
Hin6I	GCGC	2 cut(s)	401, 761
HinP1I	GCGC	2 cut(s)	401, 761
HinfI	GANTC	4 cut(s)	59, 523, 700, 1142
HpaII	CCGG	6 cut(s)	275, 349, 477, 1037, 1398, 1609
HphI	GGTGA	4 cut(s)	24, 111, 151, 491
Hpy166II	GTNNAC	2 cut(s)	821, 1378
Hpy188I	TCNGA	8 cut(s)	12, 412, 522, 604, 1147, 1237, 1259, 1413
Hpy188III	TCNNGA	6 cut(s)	87, 151, 287, 721, 1139, 1589
Hpy8I	GTNNAC	2 cut(s)	821, 1378
HpyAV	CCTTC	5 cut(s)	307, 361, 407, 806, 1072
HpyCH4III	ACNGT	6 cut(s)	123, 458, 568, 920, 1347, 1578
HpyCH4IV	ACGT	2 cut(s)	330, 1174
HpyF10VI	GCNNNNNNNGC	6 cut(s)	143, 548, 965, 1196, 1389, 1448
HpyF3I	CTNAG	2 cut(s)	11, 85
HpySE526I	ACGT	2 cut(s)	330, 1174
Hsp92I	GRCGYC	1 cut(s)	401
Hsp92II	CATG	9 cut(s)	308, 546, 752, 909, 1166, 1218, 1373, 1592, 1604
HspAI	GCGC	2 cut(s)	401, 761
KasI	GGCGCC	1 cut(s)	400
KflI	GGGWCCC	1 cut(s)	298
Ksp22I	TGATCA	1 cut(s)	424
KspI	CCGCGG	1 cut(s)	1106
Kzo9I	GATC	5 cut(s)	283, 424, 604, 664, 931
LguI	GCTCTTC	1 cut(s)	1326
LmnI	GCTCC	1 cut(s)	479
Lsp1109I	GCAGC	8 cut(s)	943, 1395, 1456, 1471, 1486, 1532, 1535, 1553
LweI	GCATC	4 cut(s)	261, 370, 968, 1228
MaeI	CTAG	2 cut(s)	659, 1338
MaeII	ACGT	2 cut(s)	330, 1174
MaeIII	GTNAC	1 cut(s)	479
MalI	GATC	5 cut(s)	285, 426, 606, 666, 933
MboI	GATC	5 cut(s)	283, 424, 604, 664, 931
MboII	GAAGA	5 cut(s)	17, 998, 1148, 1151, 1313
MhlI	GDGCHC	2 cut(s)	1321, 1422
MlsI	TGGCCA	1 cut(s)	595
MluCI	AATT	8 cut(s)	15, 38, 50, 239, 598, 893, 1011, 1461
MluNI	TGGCCA	1 cut(s)	595
Mly113I	GGCGCC	1 cut(s)	401
MlyI	GAGTC	1 cut(s)	1136
MmeI	TCCRAC	3 cut(s)	390, 584, 866
Mox20I	TGGCCA	1 cut(s)	595
MroXI	GAANNNNTTC	1 cut(s)	371
MscI	TGGCCA	1 cut(s)	595
MseI	TTAA	3 cut(s)	93, 468, 1268
MslI	CAYNNNNRTG	2 cut(s)	1493, 1587
Msp20I	TGGCCA	1 cut(s)	595
MspA1I	CMGCKG	3 cut(s)	968, 997, 1105
MspI	CCGG	6 cut(s)	275, 349, 477, 1037, 1398, 1609
MspR9I	CCNGG	2 cut(s)	230, 1038
MvaI	CCWGG	1 cut(s)	230
MvnI	CGCG	2 cut(s)	137, 1105
MwoI	GCNNNNNNNGC	6 cut(s)	143, 548, 965, 1196, 1389, 1448
NarI	GGCGCC	1 cut(s)	401
NciI	CCSGG	1 cut(s)	1038
NdeI	CATATG	1 cut(s)	757
NdeII	GATC	5 cut(s)	283, 424, 604, 664, 931
NlaIII	CATG	9 cut(s)	308, 546, 752, 909, 1166, 1218, 1373, 1592, 1604
NlaIV	GGNNCC	8 cut(s)	133, 299, 300, 347, 402, 475, 741, 1367
NmuCI	GTSAC	1 cut(s)	479
NsbI	TGCGCA	1 cut(s)	762
NspI	RCATGY	2 cut(s)	546, 1218
PagI	TCATGA	1 cut(s)	1588
PciSI	GCTCTTC	1 cut(s)	1326
PdmI	GAANNNNTTC	1 cut(s)	371
PfeI	GAWTC	3 cut(s)	59, 523, 700
PflMI	CCANNNNNTGG	2 cut(s)	397, 512
PleI	GAGTC	1 cut(s)	1136
PluTI	GGCGCC	1 cut(s)	404
PpsI	GAGTC	1 cut(s)	1136
PpuMI	RGGWCCY	1 cut(s)	298
Psp5II	RGGWCCY	1 cut(s)	298
Psp6I	CCWGG	1 cut(s)	228
PspFI	CCCAGC	1 cut(s)	993
PspGI	CCWGG	1 cut(s)	228
PspN4I	GGNNCC	8 cut(s)	133, 299, 300, 347, 402, 475, 741, 1367
PspPI	GGNCC	7 cut(s)	298, 346, 515, 680, 739, 1193, 1365
PspPPI	RGGWCCY	1 cut(s)	298
PstI	CTGCAG	1 cut(s)	1385
PstNI	CAGNNNCTG	3 cut(s)	1351, 1362, 1499
PvuII	CAGCTG	1 cut(s)	968
RsaI	GTAC	6 cut(s)	168, 251, 713, 922, 1277, 1361
RsaNI	GTAC	6 cut(s)	167, 250, 712, 921, 1276, 1360
RseI	CAYNNNNRTG	2 cut(s)	1493, 1587
SacII	CCGCGG	1 cut(s)	1106
SapI	GCTCTTC	1 cut(s)	1326
SaqAI	TTAA	3 cut(s)	93, 468, 1268
Sau3AI	GATC	5 cut(s)	283, 424, 604, 664, 931
Sau96I	GGNCC	7 cut(s)	298, 346, 515, 680, 739, 1193, 1365
SchI	GAGTC	1 cut(s)	1136
ScrFI	CCNGG	2 cut(s)	230, 1038
SduI	GDGCHC	2 cut(s)	1321, 1422
SfaNI	GCATC	4 cut(s)	261, 370, 968, 1228
SfcI	CTRYAG	2 cut(s)	1381, 1452
SfoI	GGCGCC	1 cut(s)	402
Sfr303I	CCGCGG	1 cut(s)	1106
SgrBI	CCGCGG	1 cut(s)	1106
SinI	GGWCC	5 cut(s)	298, 346, 680, 739, 1365
SmiMI	CAYNNNNRTG	2 cut(s)	1493, 1587
SmlI	CTYRAG	2 cut(s)	498, 938
SmoI	CTYRAG	2 cut(s)	498, 938
Sse9I	AATT	8 cut(s)	15, 38, 50, 239, 598, 893, 1011, 1461
SspDI	GGCGCC	1 cut(s)	400
SspMI	CTAG	2 cut(s)	659, 1338
StyD4I	CCNGG	2 cut(s)	228, 1036
TaaI	ACNGT	6 cut(s)	123, 458, 568, 920, 1347, 1578
TaiI	ACGT	2 cut(s)	333, 1177
TaqI	TCGA	7 cut(s)	182, 216, 243, 288, 375, 1058, 1422
TaqII	GACCGA	1 cut(s)	200
TasI	AATT	8 cut(s)	15, 38, 50, 239, 598, 893, 1011, 1461
TauI	GCSGC	2 cut(s)	554, 1445
TfiI	GAWTC	3 cut(s)	59, 523, 700
Tru1I	TTAA	3 cut(s)	93, 468, 1268
Tru9I	TTAA	3 cut(s)	93, 468, 1268
TscAI	CASTG	6 cut(s)	434, 449, 1208, 1318, 1399, 1500
TseFI	GTSAC	1 cut(s)	479
TseI	GCWGC	8 cut(s)	956, 1383, 1469, 1484, 1499, 1520, 1523, 1541
Tsp45I	GTSAC	1 cut(s)	479
TspDTI	ATGAA	6 cut(s)	9, 481, 853, 1106, 1151, 1577
TspGWI	ACGGA	1 cut(s)	255
TspRI	CASTG	6 cut(s)	434, 449, 1208, 1318, 1399, 1500
Van91I	CCANNNNNTGG	2 cut(s)	397, 512
VpaK11BI	GGWCC	5 cut(s)	298, 346, 680, 739, 1365
XapI	RAATTY	5 cut(s)	15, 50, 239, 598, 893
XceI	RCATGY	2 cut(s)	546, 1218
XmiI	GTMKAC	1 cut(s)	820
XmnI	GAANNNNTTC	1 cut(s)	371
XspI	CTAG	2 cut(s)	659, 1338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.