Protochlorophyllide-dependent translocon component 52
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1667 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1424 |
| Acc36I | ACCTGC | 3 cut(s) | 1667, 2563, 2672 |
| Acc65I | GGTACC | 2 cut(s) | 1389, 2496 |
| AccB1I | GGYRCC | 3 cut(s) | 705, 1389, 2496 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2746 |
| AccII | CGCG | 1 cut(s) | 135 |
| AciI | CCGC | 7 cut(s) | 133, 135, 428, 544, 2030, 2417, 2462 |
| AclWI | GGATC | 6 cut(s) | 325, 379, 692, 825, 1727, 1787 |
| AcoI | YGGCCR | 1 cut(s) | 1721 |
| AcsI | RAATTY | 3 cut(s) | 6, 1181, 1367 |
| AcuI | CTGAAG | 1 cut(s) | 1560 |
| AfaI | GTAC | 6 cut(s) | 452, 1391, 1489, 1693, 1841, 2498 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1640, 2126, 2275, 2746 |
| AflII | CTTAAG | 2 cut(s) | 239, 539 |
| AgeI | ACCGGT | 1 cut(s) | 2499 |
| AjnI | CCWGG | 4 cut(s) | 2008, 2095, 2173, 2745 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 297, 329 |
| Alw21I | GWGCWC | 1 cut(s) | 939 |
| Alw26I | GTCTC | 2 cut(s) | 1310, 2508 |
| AlwI | GGATC | 6 cut(s) | 325, 379, 692, 825, 1727, 1787 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 68 |
| Ama87I | CYCGRG | 1 cut(s) | 358 |
| AoxI | GGCC | 4 cut(s) | 882, 1118, 1642, 1721 |
| ApeKI | GCWGC | 7 cut(s) | 620, 676, 1073, 2084, 2520, 2606, 2639 |
| ApoI | RAATTY | 3 cut(s) | 6, 1181, 1367 |
| AsiGI | ACCGGT | 1 cut(s) | 2499 |
| Asp718I | GGTACC | 2 cut(s) | 1389, 2496 |
| AspLEI | GCGC | 1 cut(s) | 2653 |
| AspS9I | GGNCC | 6 cut(s) | 465, 612, 866, 1334, 1643, 1867 |
| AsuHPI | GGTGA | 6 cut(s) | 149, 400, 1279, 1619, 2085, 2109 |
| AsuII | TTCGAA | 2 cut(s) | 995, 1661 |
| AsuNHI | GCTAGC | 3 cut(s) | 478, 1805, 2327 |
| AvaI | CYCGRG | 1 cut(s) | 358 |
| AvaII | GGWCC | 5 cut(s) | 465, 612, 866, 1334, 1867 |
| AxyI | CCTNAGG | 1 cut(s) | 166 |
| BaeGI | GKGCMC | 1 cut(s) | 1031 |
| BalI | TGGCCA | 1 cut(s) | 1723 |
| BanI | GGYRCC | 3 cut(s) | 705, 1389, 2496 |
| BanII | GRGCYC | 1 cut(s) | 939 |
| BbsI | GAAGAC | 2 cut(s) | 963, 2569 |
| Bbv12I | GWGCWC | 1 cut(s) | 939 |
| BbvI | GCAGC | 7 cut(s) | 607, 688, 1060, 2071, 2532, 2593, 2626 |
| BccI | CCATC | 9 cut(s) | 865, 899, 1168, 1183, 1336, 1634, 1804, 1807, 2238 |
| BceAI | ACGGC | 1 cut(s) | 314 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 132, 166 |
| BciT130I | CCWGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| BclI | TGATCA | 1 cut(s) | 1552 |
| BcoDI | GTCTC | 2 cut(s) | 1310, 2508 |
| BfaI | CTAG | 8 cut(s) | 479, 497, 603, 785, 1806, 2328, 2549, 2654 |
| BfmI | CTRYAG | 1 cut(s) | 2518 |
| BfrI | CTTAAG | 2 cut(s) | 239, 539 |
| BfuAI | ACCTGC | 3 cut(s) | 1667, 2563, 2672 |
| BisI | GCNGC | 9 cut(s) | 429, 621, 677, 1074, 2030, 2085, 2521, 2607, 2640 |
| BlpI | GCTNAGC | 1 cut(s) | 534 |
| BlsI | GCNGC | 9 cut(s) | 430, 622, 678, 1075, 2031, 2086, 2522, 2608, 2641 |
| Bme1390I | CCNGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| Bme18I | GGWCC | 5 cut(s) | 465, 612, 866, 1334, 1867 |
| BmeT110I | CYCGRG | 1 cut(s) | 358 |
| BmgT120I | GGNCC | 6 cut(s) | 465, 612, 866, 1334, 1643, 1867 |
| BmiI | GGNNCC | 6 cut(s) | 707, 1063, 1391, 1530, 1869, 2498 |
| BmrFI | CCNGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| BmrI | ACTGGG | 3 cut(s) | 1230, 2332, 2460 |
| BmsI | GCATC | 7 cut(s) | 130, 955, 1389, 1498, 2096, 2314, 2365 |
| BmtI | GCTAGC | 3 cut(s) | 482, 1809, 2331 |
| BmuI | ACTGGG | 3 cut(s) | 1230, 2332, 2460 |
| BpiI | GAAGAC | 2 cut(s) | 963, 2569 |
| BpmI | CTGGAG | 3 cut(s) | 93, 972, 1077 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 534 |
| Bpu14I | TTCGAA | 2 cut(s) | 995, 1661 |
| BpuEI | CTTGAG | 1 cut(s) | 1611 |
| BsaI | GGTCTC | 1 cut(s) | 2508 |
| BsaJI | CCNNGG | 5 cut(s) | 133, 624, 701, 1131, 2745 |
| BsaWI | WCCGGW | 2 cut(s) | 1780, 2499 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1640, 2126, 2275, 2746 |
| Bse118I | RCCGGY | 1 cut(s) | 2499 |
| Bse21I | CCTNAGG | 1 cut(s) | 166 |
| BseBI | CCWGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| BseDI | CCNNGG | 5 cut(s) | 133, 624, 701, 1131, 2745 |
| BseGI | GGATG | 7 cut(s) | 220, 387, 910, 970, 1298, 2087, 2329 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1640, 2126, 2275, 2746 |
| BseMII | CTCAG | 5 cut(s) | 21, 525, 1000, 1133, 1305 |
| BseRI | GAGGAG | 2 cut(s) | 929, 1074 |
| BseSI | GKGCMC | 1 cut(s) | 1031 |
| BseXI | GCAGC | 7 cut(s) | 607, 688, 1060, 2071, 2532, 2593, 2626 |
| BseYI | CCCAGC | 1 cut(s) | 1076 |
| BsgI | GTGCAG | 3 cut(s) | 510, 1695, 1718 |
| Bsh1236I | CGCG | 1 cut(s) | 135 |
| BshFI | GGCC | 4 cut(s) | 884, 1120, 1644, 1723 |
| BshNI | GGYRCC | 3 cut(s) | 705, 1389, 2496 |
| BshTI | ACCGGT | 1 cut(s) | 2499 |
| BsiHKAI | GWGCWC | 1 cut(s) | 939 |
| BsiHKCI | CYCGRG | 1 cut(s) | 358 |
| BsiSI | CCGG | 2 cut(s) | 1781, 2500 |
| BslFI | GGGAC | 3 cut(s) | 1412, 1487, 2142 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1640, 2126, 2275, 2746 |
| BsmAI | GTCTC | 2 cut(s) | 1310, 2508 |
| BsmFI | GGGAC | 3 cut(s) | 1412, 1487, 2142 |
| BsmI | GAATGC | 1 cut(s) | 1039 |
| BsnI | GGCC | 4 cut(s) | 884, 1120, 1644, 1723 |
| Bso31I | GGTCTC | 1 cut(s) | 2508 |
| BsoBI | CYCGRG | 1 cut(s) | 358 |
| Bsp119I | TTCGAA | 2 cut(s) | 995, 1661 |
| Bsp1286I | GDGCHC | 2 cut(s) | 939, 1031 |
| Bsp1407I | TGTACA | 1 cut(s) | 450 |
| Bsp143I | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 534 |
| Bsp19I | CCATGG | 1 cut(s) | 1131 |
| BspACI | CCGC | 7 cut(s) | 133, 135, 428, 544, 2030, 2417, 2462 |
| BspANI | GGCC | 4 cut(s) | 884, 1120, 1644, 1723 |
| BspCNI | CTCAG | 5 cut(s) | 22, 526, 999, 1134, 1306 |
| BspFNI | CGCG | 1 cut(s) | 135 |
| BspLI | GGNNCC | 6 cut(s) | 707, 1063, 1391, 1530, 1869, 2498 |
| BspMAI | CTGCAG | 1 cut(s) | 2522 |
| BspMI | ACCTGC | 3 cut(s) | 1667, 2563, 2672 |
| BspOI | GCTAGC | 3 cut(s) | 482, 1809, 2331 |
| BspPI | GGATC | 6 cut(s) | 325, 379, 692, 825, 1727, 1787 |
| BspT104I | TTCGAA | 2 cut(s) | 995, 1661 |
| BspT107I | GGYRCC | 3 cut(s) | 705, 1389, 2496 |
| BspTI | CTTAAG | 2 cut(s) | 239, 539 |
| BspTNI | GGTCTC | 1 cut(s) | 2508 |
| BsrFI | RCCGGY | 1 cut(s) | 2499 |
| BsrGI | TGTACA | 1 cut(s) | 450 |
| BssAI | RCCGGY | 1 cut(s) | 2499 |
| BssECI | CCNNGG | 5 cut(s) | 133, 624, 701, 1131, 2745 |
| BssMI | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| BssT1I | CCWWGG | 3 cut(s) | 624, 701, 1131 |
| Bst2UI | CCWGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| Bst4CI | ACNGT | 6 cut(s) | 38, 70, 1127, 1696, 2018, 2484 |
| BstAFI | CTTAAG | 2 cut(s) | 239, 539 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 488, 2526 |
| BstAUI | TGTACA | 1 cut(s) | 450 |
| BstBI | TTCGAA | 2 cut(s) | 995, 1661 |
| BstC8I | GCNNGC | 6 cut(s) | 236, 480, 1807, 2139, 2329, 2555 |
| BstDEI | CTNAG | 7 cut(s) | 30, 166, 534, 986, 1142, 1314, 1971 |
| BstDSI | CCRYGG | 2 cut(s) | 133, 1131 |
| BstF5I | GGATG | 7 cut(s) | 220, 387, 910, 970, 1298, 2087, 2329 |
| BstFNI | CGCG | 1 cut(s) | 135 |
| BstHHI | GCGC | 1 cut(s) | 2653 |
| BstKTI | GATC | 9 cut(s) | 119, 320, 365, 387, 700, 833, 1555, 1735, 1795 |
| BstMAI | GTCTC | 2 cut(s) | 1310, 2508 |
| BstMBI | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 297, 488, 682, 1061, 1070, 2526, 2543, 2648, 2657 |
| BstNI | CCWGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| BstNSI | RCATGY | 2 cut(s) | 1436, 1674 |
| BstSCI | CCNGG | 4 cut(s) | 2008, 2095, 2173, 2745 |
| BstSFI | CTRYAG | 1 cut(s) | 2518 |
| BstSLI | GKGCMC | 1 cut(s) | 1031 |
| BstUI | CGCG | 1 cut(s) | 135 |
| BstV1I | GCAGC | 7 cut(s) | 607, 688, 1060, 2071, 2532, 2593, 2626 |
| BstV2I | GAAGAC | 2 cut(s) | 963, 2569 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 424, 950, 1051, 2078 |
| Bsu36I | CCTNAGG | 1 cut(s) | 166 |
| BsuRI | GGCC | 4 cut(s) | 884, 1120, 1644, 1723 |
| BtgI | CCRYGG | 2 cut(s) | 133, 1131 |
| BtgZI | GCGATG | 1 cut(s) | 1978 |
| BtsCI | GGATG | 7 cut(s) | 220, 387, 910, 970, 1298, 2087, 2329 |
| BtsI | GCAGTG | 3 cut(s) | 854, 1577, 2466 |
| BveI | ACCTGC | 3 cut(s) | 1667, 2563, 2672 |
| Cac8I | GCNNGC | 6 cut(s) | 236, 480, 1807, 2139, 2329, 2555 |
| CaiI | CAGNNNCTG | 1 cut(s) | 68 |
| CfoI | GCGC | 1 cut(s) | 2653 |
| Cfr10I | RCCGGY | 1 cut(s) | 2499 |
| Cfr13I | GGNCC | 6 cut(s) | 465, 612, 866, 1334, 1643, 1867 |
| Cfr42I | CCGCGG | 1 cut(s) | 136 |
| Csp6I | GTAC | 6 cut(s) | 451, 1390, 1488, 1692, 1840, 2497 |
| CspAI | ACCGGT | 1 cut(s) | 2499 |
| CviQI | GTAC | 6 cut(s) | 451, 1390, 1488, 1692, 1840, 2497 |
| DdeI | CTNAG | 7 cut(s) | 30, 166, 534, 986, 1142, 1314, 1971 |
| DpnI | GATC | 9 cut(s) | 118, 319, 364, 386, 699, 832, 1554, 1734, 1794 |
| DpnII | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| DraI | TTTAAA | 1 cut(s) | 208 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1424 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1424 |
| EaeI | YGGCCR | 1 cut(s) | 1721 |
| Ecl136II | GAGCTC | 1 cut(s) | 937 |
| Eco130I | CCWWGG | 3 cut(s) | 624, 701, 1131 |
| Eco24I | GRGCYC | 1 cut(s) | 939 |
| Eco31I | GGTCTC | 1 cut(s) | 2508 |
| Eco47I | GGWCC | 5 cut(s) | 465, 612, 866, 1334, 1867 |
| Eco53kI | GAGCTC | 1 cut(s) | 937 |
| Eco57I | CTGAAG | 1 cut(s) | 1560 |
| Eco81I | CCTNAGG | 1 cut(s) | 166 |
| Eco88I | CYCGRG | 1 cut(s) | 358 |
| EcoICRI | GAGCTC | 1 cut(s) | 937 |
| EcoRII | CCWGG | 4 cut(s) | 2008, 2095, 2173, 2745 |
| EcoT14I | CCWWGG | 3 cut(s) | 624, 701, 1131 |
| EcoT38I | GRGCYC | 1 cut(s) | 939 |
| ErhI | CCWWGG | 3 cut(s) | 624, 701, 1131 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 798, 830, 1737, 1769 |
| FaqI | GGGAC | 3 cut(s) | 1412, 1487, 2142 |
| FauI | CCCGC | 1 cut(s) | 2410 |
| FauNDI | CATATG | 2 cut(s) | 1801, 1885 |
| FbaI | TGATCA | 1 cut(s) | 1552 |
| Fnu4HI | GCNGC | 9 cut(s) | 429, 621, 677, 1074, 2030, 2085, 2521, 2607, 2640 |
| FokI | GGATG | 7 cut(s) | 227, 394, 917, 977, 1285, 2074, 2336 |
| FriOI | GRGCYC | 1 cut(s) | 939 |
| Fsp4HI | GCNGC | 9 cut(s) | 429, 621, 677, 1074, 2030, 2085, 2521, 2607, 2640 |
| FspBI | CTAG | 8 cut(s) | 479, 497, 603, 785, 1806, 2328, 2549, 2654 |
| GlaI | GCGC | 1 cut(s) | 2652 |
| GluI | GCNGC | 9 cut(s) | 429, 621, 677, 1074, 2030, 2085, 2521, 2607, 2640 |
| GsaI | CCCAGC | 1 cut(s) | 1080 |
| GsuI | CTGGAG | 3 cut(s) | 93, 972, 1077 |
| HaeIII | GGCC | 4 cut(s) | 884, 1120, 1644, 1723 |
| HapII | CCGG | 2 cut(s) | 1781, 2500 |
| HhaI | GCGC | 1 cut(s) | 2653 |
| Hin6I | GCGC | 1 cut(s) | 2651 |
| HinP1I | GCGC | 1 cut(s) | 2651 |
| HincII | GTYRAC | 1 cut(s) | 2068 |
| HindII | GTYRAC | 1 cut(s) | 2068 |
| HindIII | AAGCTT | 2 cut(s) | 457, 2349 |
| HinfI | GANTC | 8 cut(s) | 59, 811, 1425, 1651, 1707, 2005, 2272, 2279 |
| HpaII | CCGG | 2 cut(s) | 1781, 2500 |
| HphI | GGTGA | 6 cut(s) | 149, 400, 1279, 1619, 2085, 2109 |
| Hpy166II | GTNNAC | 5 cut(s) | 310, 451, 2068, 2448, 2515 |
| Hpy188III | TCNNGA | 9 cut(s) | 174, 603, 815, 951, 1279, 1332, 1849, 2276, 2729 |
| Hpy8I | GTNNAC | 5 cut(s) | 310, 451, 2068, 2448, 2515 |
| HpyAV | CCTTC | 9 cut(s) | 159, 258, 791, 796, 1018, 1489, 1535, 1557, 1934 |
| HpyCH4III | ACNGT | 6 cut(s) | 38, 70, 1127, 1696, 2018, 2484 |
| HpyCH4IV | ACGT | 1 cut(s) | 595 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 297, 488, 682, 1061, 1070, 2526, 2543, 2648, 2657 |
| HpyF3I | CTNAG | 7 cut(s) | 30, 166, 534, 986, 1142, 1314, 1971 |
| HpySE526I | ACGT | 1 cut(s) | 595 |
| HspAI | GCGC | 1 cut(s) | 2651 |
| KpnI | GGTACC | 2 cut(s) | 1393, 2500 |
| Ksp22I | TGATCA | 1 cut(s) | 1552 |
| KspI | CCGCGG | 1 cut(s) | 136 |
| Kzo9I | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| LmnI | GCTCC | 5 cut(s) | 934, 942, 1061, 1534, 2476 |
| Lsp1109I | GCAGC | 7 cut(s) | 607, 688, 1060, 2071, 2532, 2593, 2626 |
| LweI | GCATC | 7 cut(s) | 130, 955, 1389, 1498, 2096, 2314, 2365 |
| MaeI | CTAG | 8 cut(s) | 479, 497, 603, 785, 1806, 2328, 2549, 2654 |
| MaeII | ACGT | 1 cut(s) | 595 |
| MaeIII | GTNAC | 4 cut(s) | 64, 1409, 1607, 2012 |
| MalI | GATC | 9 cut(s) | 118, 319, 364, 386, 699, 832, 1554, 1734, 1794 |
| MboI | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| MboII | GAAGA | 5 cut(s) | 483, 766, 968, 1675, 2569 |
| MhlI | GDGCHC | 2 cut(s) | 939, 1031 |
| MlsI | TGGCCA | 1 cut(s) | 1723 |
| MluNI | TGGCCA | 1 cut(s) | 1723 |
| MlyI | GAGTC | 2 cut(s) | 1434, 2273 |
| MmeI | TCCRAC | 4 cut(s) | 201, 412, 610, 2469 |
| Mox20I | TGGCCA | 1 cut(s) | 1723 |
| MscI | TGGCCA | 1 cut(s) | 1723 |
| MslI | CAYNNNNRTG | 3 cut(s) | 711, 1292, 2076 |
| Msp20I | TGGCCA | 1 cut(s) | 1723 |
| MspA1I | CMGCKG | 1 cut(s) | 135 |
| MspCI | CTTAAG | 2 cut(s) | 239, 539 |
| MspI | CCGG | 2 cut(s) | 1781, 2500 |
| MspR9I | CCNGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| Mva1269I | GAATGC | 1 cut(s) | 1039 |
| MvaI | CCWGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| MvnI | CGCG | 1 cut(s) | 135 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 297, 488, 682, 1061, 1070, 2526, 2543, 2648, 2657 |
| NcoI | CCATGG | 1 cut(s) | 1131 |
| NdeI | CATATG | 2 cut(s) | 1801, 1885 |
| NdeII | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| NheI | GCTAGC | 3 cut(s) | 478, 1805, 2327 |
| NlaIV | GGNNCC | 6 cut(s) | 707, 1063, 1391, 1530, 1869, 2498 |
| NmuCI | GTSAC | 3 cut(s) | 1409, 1607, 2012 |
| NspI | RCATGY | 2 cut(s) | 1436, 1674 |
| NspV | TTCGAA | 2 cut(s) | 995, 1661 |
| PaqCI | CACCTGC | 1 cut(s) | 1667 |
| PctI | GAATGC | 1 cut(s) | 1039 |
| PfeI | GAWTC | 6 cut(s) | 59, 811, 1651, 1707, 2005, 2272 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2746 |
| PinAI | ACCGGT | 1 cut(s) | 2499 |
| PkrI | GCNGC | 9 cut(s) | 430, 622, 678, 1075, 2031, 2086, 2522, 2608, 2641 |
| PleI | GAGTC | 2 cut(s) | 1433, 2273 |
| PpsI | GAGTC | 2 cut(s) | 1433, 2273 |
| Psp124BI | GAGCTC | 1 cut(s) | 939 |
| Psp6I | CCWGG | 4 cut(s) | 2008, 2095, 2173, 2745 |
| PspFI | CCCAGC | 1 cut(s) | 1076 |
| PspGI | CCWGG | 4 cut(s) | 2008, 2095, 2173, 2745 |
| PspN4I | GGNNCC | 6 cut(s) | 707, 1063, 1391, 1530, 1869, 2498 |
| PspPI | GGNCC | 6 cut(s) | 465, 612, 866, 1334, 1643, 1867 |
| PstI | CTGCAG | 1 cut(s) | 2522 |
| PstNI | CAGNNNCTG | 1 cut(s) | 68 |
| RsaI | GTAC | 6 cut(s) | 452, 1391, 1489, 1693, 1841, 2498 |
| RsaNI | GTAC | 6 cut(s) | 451, 1390, 1488, 1692, 1840, 2497 |
| RseI | CAYNNNNRTG | 3 cut(s) | 711, 1292, 2076 |
| SacI | GAGCTC | 1 cut(s) | 939 |
| SacII | CCGCGG | 1 cut(s) | 136 |
| SatI | GCNGC | 9 cut(s) | 429, 621, 677, 1074, 2030, 2085, 2521, 2607, 2640 |
| Sau3AI | GATC | 9 cut(s) | 116, 317, 362, 384, 697, 830, 1552, 1732, 1792 |
| Sau96I | GGNCC | 6 cut(s) | 465, 612, 866, 1334, 1643, 1867 |
| SchI | GAGTC | 2 cut(s) | 1434, 2273 |
| ScrFI | CCNGG | 4 cut(s) | 2010, 2097, 2175, 2747 |
| SduI | GDGCHC | 2 cut(s) | 939, 1031 |
| SfaNI | GCATC | 7 cut(s) | 130, 955, 1389, 1498, 2096, 2314, 2365 |
| SfcI | CTRYAG | 1 cut(s) | 2518 |
| Sfr303I | CCGCGG | 1 cut(s) | 136 |
| SfuI | TTCGAA | 2 cut(s) | 995, 1661 |
| SgrBI | CCGCGG | 1 cut(s) | 136 |
| SinI | GGWCC | 5 cut(s) | 465, 612, 866, 1334, 1867 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 711, 1292, 2076 |
| SmlI | CTYRAG | 3 cut(s) | 239, 539, 1626 |
| SmoI | CTYRAG | 3 cut(s) | 239, 539, 1626 |
| SsiI | CCGC | 7 cut(s) | 133, 135, 428, 544, 2030, 2417, 2462 |
| SspMI | CTAG | 8 cut(s) | 479, 497, 603, 785, 1806, 2328, 2549, 2654 |
| SstI | GAGCTC | 1 cut(s) | 939 |
| StyD4I | CCNGG | 4 cut(s) | 2008, 2095, 2173, 2745 |
| StyI | CCWWGG | 3 cut(s) | 624, 701, 1131 |
| TaaI | ACNGT | 6 cut(s) | 38, 70, 1127, 1696, 2018, 2484 |
| TaiI | ACGT | 1 cut(s) | 598 |
| TaqI | TCGA | 5 cut(s) | 152, 829, 995, 1661, 1912 |
| TatI | WGTACW | 2 cut(s) | 450, 1487 |
| TauI | GCSGC | 2 cut(s) | 431, 2032 |
| TfiI | GAWTC | 6 cut(s) | 59, 811, 1651, 1707, 2005, 2272 |
| TseFI | GTSAC | 3 cut(s) | 1409, 1607, 2012 |
| TseI | GCWGC | 7 cut(s) | 620, 676, 1073, 2084, 2520, 2606, 2639 |
| Tsp45I | GTSAC | 3 cut(s) | 1409, 1607, 2012 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2746 |
| Vha464I | CTTAAG | 2 cut(s) | 239, 539 |
| VpaK11BI | GGWCC | 5 cut(s) | 465, 612, 866, 1334, 1867 |
| XapI | RAATTY | 3 cut(s) | 6, 1181, 1367 |
| XbaI | TCTAGA | 1 cut(s) | 602 |
| XceI | RCATGY | 2 cut(s) | 1436, 1674 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 777 |
| XspI | CTAG | 8 cut(s) | 479, 497, 603, 785, 1806, 2328, 2549, 2654 |