Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0003435

Physical Location & Seq

Genomic Coordinates Reverse (-)

41416756 .. 41424452

Gene Structure 7697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1280200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGCCAGTTTCAGCAGCTGCAGCTCTGCAGTCATCTCTCTGCTTCTCTTCTAACAATCCATCATCTTCTTCTGATTTGGACACCCAACTGGCCGCAAAACCCAAAAGCCTGCTCCACAAGCATCCTCTCTACACACCCACCCACACCAAACTCTCCCTCCAATTCAAAGAGAAGATCCTCTGCCTTGAAATCATGGGAGTCGATGCAGGCAAAGCCCTCTCCCAAAACCCTAATCTCCACTCCGCGACTCTCGACTCCATCCACTCCATAATCTCCTTCCTCCGCTCCAAAGGCATCCACCAAAAGGACCTGGCCAAGATCTTTGGGATGTGCCCCTGCATCCTCACCTCCAGCATCAAGTCCGACCTCAACCCGGTTTTCGCCTTCCTCTCCCAAGACCTAAAAGTCCCGGATTGCTACTTCAGAAGGGTCATCAACAAGTGCCCTAGATTGCTTGCTTCAAGTGTGAAAGACCAGCTCAAACCAGCGCTTCTTTACCTCCAGAGCCTTGGGTTCAAAGACCTAAATGCACTAGCCTACCATGACCCTGTGCTGCTGGTTTCCAATGTGGAGAGGACATTGATTCCCAAGCTTGAGTACTTGGAGGGTTTGGGATTCCCAAGGGAGGAGACTCTGGGGATGGTGCTGAGGTGCCCTGGACTGCTAACCTTCAGCATTGAGAACAACTTCAAGCCAAAATTCGAGTACTTTTCGGTGGAGATGGGAAAAGGGTTGGAGGAATTAAAGGGGTTTCCGCAGTATTTTACGTTTAGTTTGGAGAAGAGGATAAGGCCGAGGCACATGGAGGTTGTGGAGAGGGGAGTGGAAGTGCCTTTGCCATTGATGCTTAAGAGTACTGATGAGGAGTTTAGGAAGTTGCTCAGGGAATTAGGGGGTGCAATTAGAGAGCGAAGGTGCGCGCTTTTTTGCATGCTTCTTGCATGCCTGGGTCTGCGTTTGGCCGTCGAACTGCTCGACCCATTCTCACTTGTTTCCGATGAGCTGTCGATTATTGCTAACAGGTTGCGGGCGATGGTAGTTTCTGAGGTCCCTAAGCTTTCCTCCGCTGCCGAGTACTTCTTTAAAACGGGAGTGGAAGGAAAGAGGTTTCGTTCCACGGTCTTATTGCTGATGTCAACCGCGTTGAATATCACTGTACCTGAACCTCCTACGGAGCTGCAAGAGGCTTTGTCAACAGAGCTACGCGCAATGCATATCACTGTACCTGAACCTCCTACGGAACTGCAAGAGGCCTTGTCAACAGAGCTACGCGCAAGGCATACCACTGTACCTGAACCTCCTACGGAACTGCAAGAGGCTTTGTCAACAGAGCTACGCGCAAGGCAACAACGAATAGCAGAAATCACAGAGATGTTTCATGTTAGTTATATCTTTGCTAATGATCTTGTGGCAAGCCTTTTACACGATGATGTATTGGATGATGCAGACACAAGGCGTGGTGTTGGTTCAGTAAATTGTGTAATGGGAAATAAGTTGGCTGTTTTAGCAGGGGATTTTGTGCTTTCCCGAGCCTGTGTCGCACTTGCCTCCTTGAGAAACACAGAGGTTGTATCATTAATGTCAACGGTTGTTGAGCATCTTGTGACTGGTGAAACCATGCAAATGACTACCAAATCTGATCAACGTTTTAGCATGGAATATTATATGCAAAAGACTTATTACAAGACTGCATCACTGATTTCAAATAGTTGCAAATCAATTGCCGTTCTAGCTGGGCATACAACCGAAGTTGCTGCGTTGGCTTATGAATATGGAAAAAATCTGGGACTGGCATTTCAATTAATAGATGATCTCCTTGATTTTACGGGCACATCAGCTTCACTTGGAAAGGCATCTTTATCTGACATCCGCCATGGCATTGTAACTGCTCCAATATTGTTTGCCATGGAAGAGTTTCCTCAGTTGCGTACAGTTGTTGAACAATGCCTTGATAACAACCCTGCAAATATTGAACTCGCTCTCAACTACCTCGGTAGGAGCCGTGGAATACATAGGACAAGGGAGCTAGCCACAAAACATGCAAACCTTGCCGCAGCAGCAATCAAATCTCTGCCCAAGAGCGAAGACGAGAATGTCAGAAAATCGAGGAGGGCACTCGTACATCTCACCCAGGTAGTCATTACAGGAACCAAGAAAAGGGACGCCCCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004659 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006732 GO:0006733 GO:0006743 GO:0006744 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016740 GO:0016765 GO:0022414 GO:0032501 GO:0032502 GO:0042180 GO:0042181 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050347 GO:0051186 GO:0051188 GO:0061458 GO:0071704 GO:1901576 GO:1901661 GO:1901663

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

polyprenyl_synt

Protein Analysis

725

Amino Acids

80.3

Weight (kDa)

7.57

Isoelectric Point (pI)

46.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
mTERF	PF02536	56 - 173	4e-11	mTERF
mTERF	PF02536	183 - 290	1.3e-28	mTERF
polyprenyl_synt	PF00348	440 - 658	6.3e-58	Polyprenyl synthetase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003435)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34630 AT2G34630
fragaria_vesca	FvH4_3g05080 FvH4_3g05080 FvH4_3g05080 FvH4_3g05080
malus_domestica	MD05G1280000.v1.1 MD05G1280200.v1.1 MD10G1258500.v1.1
prunus_persica	Prupe.4G085300_v2.0.a1
pyrus_communis	pycom05g26020 pycom10g21490
rosa_chinensis	RchiOBHm_Chr5g0014811 RchiOBHm_Chr5g0014881 RchiOBHm_Chr5g0014891
rosa_laevigata	RLG00000032144
rosa_multiflora	Rmu_sc0013610.1_g000004 Rmu_sc0013610.1_g000006 Rmu_sc0013610.1_g000007 Rmu_sc0013610.1_g000008 Rmu_sc0028154.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001360 Rroxscaffold_1G00061680
rosa_rugosa	Rorug05G0020900 Rorug05G0021000 Rorug05G0021000
rosa_samantha	Rh5AG116800 Rh5AG116900 Rh5BG113200 Rh5BG113300 Rh5CG125000 Rh5CG125400 Rh5DG112600 Rh5DG113100 Rh5DG113300
rosa_wichuraiana	Rw5G010050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	404, 2093
AccB1I	GGYRCC	1 cut(s)	651
AccBSI	CCGCTC	1 cut(s)	285
AccII	CGCG	6 cut(s)	245, 920, 1142, 1206, 1272, 1338
AciI	CCGC	9 cut(s)	93, 243, 283, 755, 1027, 1065, 1140, 1870, 2052
AclI	AACGTT	1 cut(s)	1645
AclWI	GGATC	1 cut(s)	169
AcoI	YGGCCR	3 cut(s)	90, 312, 960
AcsI	RAATTY	1 cut(s)	698
AcuI	CTGAAG	2 cut(s)	406, 655
AcyI	GRCGYC	1 cut(s)	2163
AfaI	GTAC	9 cut(s)	599, 707, 856, 1076, 1158, 1224, 1290, 1930, 2121
AfeI	AGCGCT	1 cut(s)	489
AfiI	CCNNNNNNNGG	4 cut(s)	304, 373, 625, 2157
AflII	CTTAAG	1 cut(s)	848
AjnI	CCWGG	4 cut(s)	309, 655, 945, 2130
Alw26I	GTCTC	1 cut(s)	623
AlwI	GGATC	1 cut(s)	169
AlwNI	CAGNNNCTG	1 cut(s)	17
Ama87I	CYCGRG	1 cut(s)	1527
Aor51HI	AGCGCT	1 cut(s)	489
AoxI	GGCC	5 cut(s)	90, 312, 791, 960, 1251
ApeKI	GCWGC	9 cut(s)	14, 17, 20, 553, 1067, 1177, 1754, 2054, 2057
ApoI	RAATTY	1 cut(s)	698
AseI	ATTAAT	2 cut(s)	1577, 1802
Asp700I	GAANNNNTTC	2 cut(s)	686, 1914
AspLEI	GCGC	6 cut(s)	490, 920, 922, 1208, 1274, 1340
AspS9I	GGNCC	2 cut(s)	307, 1048
AsuC2I	CCSGG	2 cut(s)	374, 410
AsuHPI	GGTGA	3 cut(s)	337, 1622, 2119
AsuNHI	GCTAGC	1 cut(s)	2026
AvaI	CYCGRG	1 cut(s)	1527
AvaII	GGWCC	2 cut(s)	307, 1048
BaeGI	GKGCMC	5 cut(s)	335, 446, 656, 1832, 2116
BaeI	ACNNNNGTAYC	2 cut(s)	1272, 1305
BalI	TGGCCA	1 cut(s)	314
BanI	GGYRCC	1 cut(s)	651
BbsI	GAAGAC	1 cut(s)	2091
BbvCI	CCTCAGC	1 cut(s)	647
BbvI	GCAGC	9 cut(s)	4, 26, 32, 540, 1054, 1164, 1741, 2066, 2069
BccI	CCATC	5 cut(s)	67, 266, 634, 715, 1027
BceAI	ACGGC	3 cut(s)	947, 1709, 1986
BcgI	CGANNNNNNTGC	2 cut(s)	1736, 1770
BciT130I	CCWGG	4 cut(s)	311, 657, 947, 2132
BclI	TGATCA	1 cut(s)	1639
BcnI	CCSGG	2 cut(s)	374, 410
BcoDI	GTCTC	1 cut(s)	623
BfaI	CTAG	4 cut(s)	447, 533, 1730, 2027
BfmI	CTRYAG	2 cut(s)	18, 26
BfoI	RGCGCY	1 cut(s)	491
BfrI	CTTAAG	1 cut(s)	848
BglII	AGATCT	1 cut(s)	318
BmcAI	AGTACT	4 cut(s)	599, 707, 856, 1076
Bme1390I	CCNGG	6 cut(s)	311, 374, 410, 657, 947, 2132
Bme18I	GGWCC	2 cut(s)	307, 1048
BmeT110I	CYCGRG	1 cut(s)	1527
BmgT120I	GGNCC	2 cut(s)	307, 1048
BmiI	GGNNCC	4 cut(s)	653, 1050, 2000, 2149
BmrFI	CCNGG	6 cut(s)	311, 374, 410, 657, 947, 2132
BmtI	GCTAGC	1 cut(s)	2030
BpiI	GAAGAC	1 cut(s)	2091
BpmI	CTGGAG	2 cut(s)	334, 485
Bpu10I	CCTNAGC	3 cut(s)	647, 881, 1053
BpuEI	CTTGAG	2 cut(s)	614, 1573
BpuMI	CCSGG	2 cut(s)	374, 410
BsaHI	GRCGYC	1 cut(s)	2163
BsaXI	ACNNNNNCTCC	4 cut(s)	141, 171, 813, 843
Bsc4I	CCNNNNNNNGG	4 cut(s)	304, 373, 625, 2157
Bse1I	ACTGG	4 cut(s)	5, 93, 1612, 1794
Bse3DI	GCAATG	1 cut(s)	1215
BseBI	CCWGG	4 cut(s)	311, 657, 947, 2132
BseGI	GGATG	8 cut(s)	121, 258, 294, 333, 339, 645, 1444, 1866
BseLI	CCNNNNNNNGG	4 cut(s)	304, 373, 625, 2157
BseMI	GCAATG	1 cut(s)	1215
BseMII	CTCAG	4 cut(s)	638, 895, 1035, 1934
BseNI	ACTGG	4 cut(s)	5, 93, 1612, 1794
BsePI	GCGCGC	1 cut(s)	918
BseRI	GAGGAG	3 cut(s)	641, 878, 2122
BseSI	GKGCMC	5 cut(s)	335, 446, 656, 1832, 2116
BseXI	GCAGC	9 cut(s)	4, 26, 32, 540, 1054, 1164, 1741, 2066, 2069
BseYI	CCCAGC	1 cut(s)	1733
Bsh1236I	CGCG	6 cut(s)	245, 920, 1142, 1206, 1272, 1338
BshFI	GGCC	5 cut(s)	92, 314, 793, 962, 1253
BshNI	GGYRCC	1 cut(s)	651
BsiHKCI	CYCGRG	1 cut(s)	1527
BsiSI	CCGG	2 cut(s)	374, 410
BslFI	GGGAC	3 cut(s)	392, 1034, 1800
BslI	CCNNNNNNNGG	4 cut(s)	304, 373, 625, 2157
BsmAI	GTCTC	1 cut(s)	623
BsmFI	GGGAC	3 cut(s)	392, 1034, 1800
BsnI	GGCC	5 cut(s)	92, 314, 793, 962, 1253
BsoBI	CYCGRG	1 cut(s)	1527
Bsp1286I	GDGCHC	5 cut(s)	335, 446, 656, 1832, 2116
Bsp143I	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
Bsp19I	CCATGG	2 cut(s)	1873, 1905
BspACI	CCGC	9 cut(s)	93, 243, 283, 755, 1027, 1065, 1140, 1870, 2052
BspANI	GGCC	5 cut(s)	92, 314, 793, 962, 1253
BspCNI	CTCAG	4 cut(s)	639, 894, 1036, 1933
BspFNI	CGCG	6 cut(s)	245, 920, 1142, 1206, 1272, 1338
BspLI	GGNNCC	4 cut(s)	653, 1050, 2000, 2149
BspMAI	CTGCAG	2 cut(s)	22, 30
BspOI	GCTAGC	1 cut(s)	2030
BspPI	GGATC	1 cut(s)	169
BspT107I	GGYRCC	1 cut(s)	651
BspTI	CTTAAG	1 cut(s)	848
BsrBI	CCGCTC	1 cut(s)	285
BsrDI	GCAATG	1 cut(s)	1215
BsrI	ACTGG	4 cut(s)	5, 93, 1612, 1794
BssHII	GCGCGC	1 cut(s)	918
BssMI	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
BssNI	GRCGYC	1 cut(s)	2163
BssT1I	CCWWGG	4 cut(s)	508, 620, 1873, 1905
Bst2UI	CCWGG	4 cut(s)	311, 657, 947, 2132
Bst4CI	ACNGT	6 cut(s)	1120, 1156, 1222, 1288, 1588, 1933
Bst6I	CTCTTC	3 cut(s)	52, 776, 1905
BstACI	GRCGYC	1 cut(s)	2163
BstAFI	CTTAAG	1 cut(s)	848
BstAPI	GCANNNNNTGC	1 cut(s)	2048
BstC8I	GCNNGC	9 cut(s)	110, 208, 456, 920, 932, 943, 1029, 1414, 2028
BstDEI	CTNAG	5 cut(s)	647, 881, 1044, 1053, 1920
BstDSI	CCRYGG	4 cut(s)	1116, 1873, 1905, 2002
BstF5I	GGATG	8 cut(s)	121, 258, 294, 333, 339, 645, 1444, 1866
BstFNI	CGCG	6 cut(s)	245, 920, 1142, 1206, 1272, 1338
BstH2I	RGCGCY	1 cut(s)	491
BstHHI	GCGC	6 cut(s)	490, 920, 922, 1208, 1274, 1340
BstKTI	GATC	5 cut(s)	177, 321, 1405, 1642, 1813
BstMAI	GTCTC	1 cut(s)	623
BstMBI	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
BstNI	CCWGG	4 cut(s)	311, 657, 947, 2132
BstNSI	RCATGY	3 cut(s)	934, 945, 2042
BstSCI	CCNGG	6 cut(s)	309, 372, 408, 655, 945, 2130
BstSFI	CTRYAG	2 cut(s)	18, 26
BstSLI	GKGCMC	5 cut(s)	335, 446, 656, 1832, 2116
BstUI	CGCG	6 cut(s)	245, 920, 1142, 1206, 1272, 1338
BstV1I	GCAGC	9 cut(s)	4, 26, 32, 540, 1054, 1164, 1741, 2066, 2069
BstV2I	GAAGAC	1 cut(s)	2091
BstX2I	RGATCY	2 cut(s)	174, 318
BstXI	CCANNNNNNTGG	1 cut(s)	509
BstYI	RGATCY	2 cut(s)	174, 318
BsuRI	GGCC	5 cut(s)	92, 314, 793, 962, 1253
BtgI	CCRYGG	4 cut(s)	1116, 1873, 1905, 2002
BtgZI	GCGATG	1 cut(s)	1046
BtsCI	GGATG	8 cut(s)	121, 258, 294, 333, 339, 645, 1444, 1866
BtsIMutI	CAGTG	4 cut(s)	1152, 1218, 1284, 1694
Cac8I	GCNNGC	9 cut(s)	110, 208, 456, 920, 932, 943, 1029, 1414, 2028
CaiI	CAGNNNCTG	1 cut(s)	17
CfoI	GCGC	6 cut(s)	490, 920, 922, 1208, 1274, 1340
Cfr13I	GGNCC	2 cut(s)	307, 1048
Csp6I	GTAC	9 cut(s)	598, 706, 855, 1075, 1157, 1223, 1289, 1929, 2120
CviQI	GTAC	9 cut(s)	598, 706, 855, 1075, 1157, 1223, 1289, 1929, 2120
DdeI	CTNAG	5 cut(s)	647, 881, 1044, 1053, 1920
DpnI	GATC	5 cut(s)	176, 320, 1404, 1641, 1812
DpnII	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
DraI	TTTAAA	1 cut(s)	1084
DrdI	GACNNNNNNGTC	2 cut(s)	404, 2093
DseDI	GACNNNNNNGTC	2 cut(s)	404, 2093
EaeI	YGGCCR	3 cut(s)	90, 312, 960
Eam1104I	CTCTTC	3 cut(s)	52, 776, 1905
EarI	CTCTTC	3 cut(s)	52, 776, 1905
EciI	GGCGGA	1 cut(s)	1859
Eco130I	CCWWGG	4 cut(s)	508, 620, 1873, 1905
Eco147I	AGGCCT	1 cut(s)	1253
Eco47I	GGWCC	2 cut(s)	307, 1048
Eco47III	AGCGCT	1 cut(s)	489
Eco57I	CTGAAG	2 cut(s)	406, 655
Eco88I	CYCGRG	1 cut(s)	1527
EcoO109I	RGGNCCY	2 cut(s)	307, 1048
EcoRII	CCWGG	4 cut(s)	309, 655, 945, 2130
EcoT14I	CCWWGG	4 cut(s)	508, 620, 1873, 1905
EcoT22I	ATGCAT	1 cut(s)	1215
ErhI	CCWWGG	4 cut(s)	508, 620, 1873, 1905
FaqI	GGGAC	3 cut(s)	392, 1034, 1800
FauI	CCCGC	1 cut(s)	1020
FbaI	TGATCA	1 cut(s)	1639
FokI	GGATG	8 cut(s)	108, 245, 281, 326, 340, 652, 1451, 1853
FspBI	CTAG	4 cut(s)	447, 533, 1730, 2027
GlaI	GCGC	6 cut(s)	489, 919, 921, 1207, 1273, 1339
GsaI	CCCAGC	1 cut(s)	1737
GsuI	CTGGAG	2 cut(s)	334, 485
HaeII	RGCGCY	1 cut(s)	491
HaeIII	GGCC	5 cut(s)	92, 314, 793, 962, 1253
HapII	CCGG	2 cut(s)	374, 410
HhaI	GCGC	6 cut(s)	490, 920, 922, 1208, 1274, 1340
Hin1I	GRCGYC	1 cut(s)	2163
Hin6I	GCGC	6 cut(s)	488, 918, 920, 1206, 1272, 1338
HinP1I	GCGC	6 cut(s)	488, 918, 920, 1206, 1272, 1338
HincII	GTYRAC	5 cut(s)	1137, 1194, 1260, 1326, 1584
HindII	GTYRAC	5 cut(s)	1137, 1194, 1260, 1326, 1584
HindIII	AAGCTT	2 cut(s)	590, 1055
HinfI	GANTC	6 cut(s)	198, 247, 254, 583, 615, 631
HpaII	CCGG	2 cut(s)	374, 410
HphI	GGTGA	3 cut(s)	337, 1622, 2119
Hpy166II	GTNNAC	5 cut(s)	1137, 1194, 1260, 1326, 1584
Hpy188I	TCNGA	8 cut(s)	73, 364, 425, 997, 1045, 1639, 1864, 2099
Hpy188III	TCNNGA	4 cut(s)	251, 502, 1527, 2172
Hpy8I	GTNNAC	5 cut(s)	1137, 1194, 1260, 1326, 1584
Hpy99I	CGWCG	1 cut(s)	968
HpyAV	CCTTC	6 cut(s)	286, 394, 420, 679, 906, 1091
HpyCH4III	ACNGT	6 cut(s)	1120, 1156, 1222, 1288, 1588, 1933
HpyCH4IV	ACGT	2 cut(s)	767, 1645
HpyF3I	CTNAG	5 cut(s)	647, 881, 1044, 1053, 1920
HpySE526I	ACGT	2 cut(s)	767, 1645
Hsp92I	GRCGYC	1 cut(s)	2163
HspAI	GCGC	6 cut(s)	488, 918, 920, 1206, 1272, 1338
Ksp22I	TGATCA	1 cut(s)	1639
Kzo9I	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
LmnI	GCTCC	6 cut(s)	117, 290, 1174, 1894, 1998, 2023
Lsp1109I	GCAGC	9 cut(s)	4, 26, 32, 540, 1054, 1164, 1741, 2066, 2069
MaeI	CTAG	4 cut(s)	447, 533, 1730, 2027
MaeII	ACGT	2 cut(s)	767, 1645
MaeIII	GTNAC	2 cut(s)	1603, 1882
MalI	GATC	5 cut(s)	176, 320, 1404, 1641, 1812
MbiI	CCGCTC	1 cut(s)	285
MboI	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
MboII	GAAGA	7 cut(s)	39, 57, 60, 184, 793, 1922, 2096
MfeI	CAATTG	1 cut(s)	1719
MflI	RGATCY	2 cut(s)	174, 318
MhlI	GDGCHC	5 cut(s)	335, 446, 656, 1832, 2116
MlsI	TGGCCA	1 cut(s)	314
MluCI	AATT	8 cut(s)	161, 698, 740, 887, 900, 1474, 1719, 1799
MluNI	TGGCCA	1 cut(s)	314
MlyI	GAGTC	4 cut(s)	207, 241, 248, 625
MmeI	TCCRAC	2 cut(s)	387, 714
Mox20I	TGGCCA	1 cut(s)	314
Mph1103I	ATGCAT	1 cut(s)	1215
MroXI	GAANNNNTTC	2 cut(s)	686, 1914
MscI	TGGCCA	1 cut(s)	314
MseI	TTAA	5 cut(s)	743, 849, 1083, 1577, 1802
MslI	CAYNNNNRTG	3 cut(s)	1370, 1428, 1622
Msp20I	TGGCCA	1 cut(s)	314
MspA1I	CMGCKG	2 cut(s)	17, 1067
MspCI	CTTAAG	1 cut(s)	848
MspI	CCGG	2 cut(s)	374, 410
MspR9I	CCNGG	6 cut(s)	311, 374, 410, 657, 947, 2132
MunI	CAATTG	1 cut(s)	1719
MvaI	CCWGG	4 cut(s)	311, 657, 947, 2132
MvnI	CGCG	6 cut(s)	245, 920, 1142, 1206, 1272, 1338
NciI	CCSGG	2 cut(s)	374, 410
NcoI	CCATGG	2 cut(s)	1873, 1905
NdeII	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
NheI	GCTAGC	1 cut(s)	2026
NlaIV	GGNNCC	4 cut(s)	653, 1050, 2000, 2149
NmeAIII	GCCGAG	2 cut(s)	819, 1096
NmuCI	GTSAC	1 cut(s)	1603
NsiI	ATGCAT	1 cut(s)	1215
NspI	RCATGY	3 cut(s)	934, 945, 2042
PaeI	GCATGC	2 cut(s)	934, 945
PauI	GCGCGC	1 cut(s)	918
PceI	AGGCCT	1 cut(s)	1253
PcsI	WCGNNNNNNNCGW	1 cut(s)	972
PdmI	GAANNNNTTC	2 cut(s)	686, 1914
PfeI	GAWTC	2 cut(s)	583, 615
PfoI	TCCNGGA	1 cut(s)	408
PleI	GAGTC	4 cut(s)	206, 241, 248, 625
PpsI	GAGTC	4 cut(s)	206, 241, 248, 625
PpuMI	RGGWCCY	2 cut(s)	307, 1048
PshBI	ATTAAT	2 cut(s)	1577, 1802
Psp1406I	AACGTT	1 cut(s)	1645
Psp5II	RGGWCCY	2 cut(s)	307, 1048
Psp6I	CCWGG	4 cut(s)	309, 655, 945, 2130
PspFI	CCCAGC	1 cut(s)	1733
PspGI	CCWGG	4 cut(s)	309, 655, 945, 2130
PspN4I	GGNNCC	4 cut(s)	653, 1050, 2000, 2149
PspPI	GGNCC	2 cut(s)	307, 1048
PspPPI	RGGWCCY	2 cut(s)	307, 1048
PstI	CTGCAG	2 cut(s)	22, 30
PstNI	CAGNNNCTG	1 cut(s)	17
PsuI	RGATCY	2 cut(s)	174, 318
PteI	GCGCGC	1 cut(s)	918
PvuII	CAGCTG	1 cut(s)	17
RsaI	GTAC	9 cut(s)	599, 707, 856, 1076, 1158, 1224, 1290, 1930, 2121
RsaNI	GTAC	9 cut(s)	598, 706, 855, 1075, 1157, 1223, 1289, 1929, 2120
RseI	CAYNNNNRTG	3 cut(s)	1370, 1428, 1622
SaqAI	TTAA	5 cut(s)	743, 849, 1083, 1577, 1802
Sau3AI	GATC	5 cut(s)	174, 318, 1402, 1639, 1810
Sau96I	GGNCC	2 cut(s)	307, 1048
ScaI	AGTACT	4 cut(s)	599, 707, 856, 1076
SchI	GAGTC	4 cut(s)	207, 241, 248, 625
ScrFI	CCNGG	6 cut(s)	311, 374, 410, 657, 947, 2132
SduI	GDGCHC	5 cut(s)	335, 446, 656, 1832, 2116
SfcI	CTRYAG	2 cut(s)	18, 26
SinI	GGWCC	2 cut(s)	307, 1048
SmiMI	CAYNNNNRTG	3 cut(s)	1370, 1428, 1622
SmlI	CTYRAG	3 cut(s)	593, 848, 1552
SmoI	CTYRAG	3 cut(s)	593, 848, 1552
SphI	GCATGC	2 cut(s)	934, 945
Sse9I	AATT	8 cut(s)	161, 698, 740, 887, 900, 1474, 1719, 1799
SseBI	AGGCCT	1 cut(s)	1253
SsiI	CCGC	9 cut(s)	93, 243, 283, 755, 1027, 1065, 1140, 1870, 2052
SspI	AATATT	3 cut(s)	1661, 1896, 1969
SspMI	CTAG	4 cut(s)	447, 533, 1730, 2027
StuI	AGGCCT	1 cut(s)	1253
StyD4I	CCNGG	6 cut(s)	309, 372, 408, 655, 945, 2130
StyI	CCWWGG	4 cut(s)	508, 620, 1873, 1905
TaaI	ACNGT	6 cut(s)	1120, 1156, 1222, 1288, 1588, 1933
TaiI	ACGT	2 cut(s)	770, 1648
TaqI	TCGA	7 cut(s)	201, 252, 702, 966, 975, 1007, 2105
TasI	AATT	8 cut(s)	161, 698, 740, 887, 900, 1474, 1719, 1799
TatI	WGTACW	4 cut(s)	597, 705, 854, 1074
TauI	GCSGC	2 cut(s)	95, 2054
TfiI	GAWTC	2 cut(s)	583, 615
Tru1I	TTAA	5 cut(s)	743, 849, 1083, 1577, 1802
Tru9I	TTAA	5 cut(s)	743, 849, 1083, 1577, 1802
TscAI	CASTG	4 cut(s)	1159, 1225, 1291, 1701
TseFI	GTSAC	1 cut(s)	1603
TseI	GCWGC	9 cut(s)	14, 17, 20, 553, 1067, 1177, 1754, 2054, 2057
Tsp45I	GTSAC	1 cut(s)	1603
TspDTI	ATGAA	2 cut(s)	1367, 1782
TspGWI	ACGGA	3 cut(s)	1187, 1253, 1319
TspRI	CASTG	4 cut(s)	1159, 1225, 1291, 1701
Vha464I	CTTAAG	1 cut(s)	848
VpaK11BI	GGWCC	2 cut(s)	307, 1048
VspI	ATTAAT	2 cut(s)	1577, 1802
XapI	RAATTY	1 cut(s)	698
XceI	RCATGY	3 cut(s)	934, 945, 2042
XmnI	GAANNNNTTC	2 cut(s)	686, 1914
XspI	CTAG	4 cut(s)	447, 533, 1730, 2027
ZrmI	AGTACT	4 cut(s)	599, 707, 856, 1076
Zsp2I	ATGCAT	1 cut(s)	1215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.