MD06G1169100.v1.1

Oleosin 16.4 kDa-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0004052
Physical Location & Seq
Forward (+)
30980696 .. 30981376
681 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1169100.v1.1.491

Sequence Viewer

Length: 681 bp
ATGGCTGAGGCCCACTACCGCTGGCAGCAACCACAACACCAAGGGTACCAAACCAACATCCAGTTCGACAATCCAAAACACCAAGGTTACCAAACTCAGTACCAGTATGACCAACAACAACAACAAAACGGCTCCTCGGCTTCGAATATTCTGGCAATTGCCACCCTCGTTCCAGTAGGGGGCACTCTACTCTTCCTTTCAGGGCTCACTCTTGCCGGTACCATCATTGGTCTGGCGATGACTACTCCGCTTTTTGTTATATTCAGCCCGGTTTTGGTCCCAGCCGCTCTAGTCATATTCCTGTCTGTGACGGGGATATTGACTTCGGGGGTTTTTGGTGTCACGGCCCTCTCGTCTTTCTCTTGGCTGGTCCGTTACTTGAGCCGATCTCGGCTGCCCCAGACCATGGGCCAGAAAGTGCAGGAGACCACGGGGTATTTGGGCCAGAAGATGCAGGAGACGGCAGGATATTTGGGACAGAAGGTGCAGGAGACCGGAGACTTTGTGGGCCACAAGATGCAGGAGACTGGAGGTCAAGTGGGCCAGATGACCAAAGAAGCGGGCCAGACTATCCAGGACAGGACCCAGGAAGGTGGTAGGGATCAAATAACCAAAGAAGGTGGCCGGGGCAAAGAAAGCGGCCGGGGCCGTGAAGGCGTTAATGTTACAGTCAAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oleosin

Protein Analysis

227

Amino Acids

24.58

Weight (kDa)

9.12

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oleosin PF01277 49 - 165 1.1e-36 Oleosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 45, 218
AccB1I GGYRCC 2 cut(s) 45, 218
AccB7I CCANNNNNTGG 1 cut(s) 406
AccBSI CCGCTC 1 cut(s) 287
AciI CCGC 5 cut(s) 19, 248, 285, 560, 639
AclWI GGATC 1 cut(s) 609
AcoI YGGCCR 2 cut(s) 622, 640
AfaI GTAC 3 cut(s) 47, 101, 220
AfiI CCNNNNNNNGG 3 cut(s) 179, 274, 406
AhdI GACNNNNNGTC 1 cut(s) 531
AjnI CCWGG 2 cut(s) 573, 585
AjuI GAANNNNNNNTTGG 2 cut(s) 47, 79
Alw26I GTCTC 5 cut(s) 419, 452, 485, 492, 518
AlwI GGATC 1 cut(s) 609
ApeKI GCWGC 2 cut(s) 25, 394
Asp718I GGTACC 2 cut(s) 45, 218
AsuC2I CCSGG 3 cut(s) 269, 626, 644
AsuII TTCGAA 1 cut(s) 143
AvaII GGWCC 3 cut(s) 277, 370, 582
BaeGI GKGCMC 1 cut(s) 185
BanI GGYRCC 2 cut(s) 45, 218
BanII GRGCYC 1 cut(s) 207
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 2 cut(s) 37, 381
BccI CCATC 1 cut(s) 230
BceAI ACGGC 4 cut(s) 145, 360, 477, 633
BciT130I CCWGG 2 cut(s) 575, 587
BcnI CCSGG 3 cut(s) 269, 626, 644
BcoDI GTCTC 5 cut(s) 419, 452, 485, 492, 518
BfaI CTAG 1 cut(s) 290
BglI GCCNNNNNGGC 1 cut(s) 654
BisI GCNGC 4 cut(s) 26, 285, 395, 640
BlsI GCNGC 4 cut(s) 27, 286, 396, 641
Bme1390I CCNGG 5 cut(s) 269, 575, 587, 626, 644
Bme18I GGWCC 3 cut(s) 277, 370, 582
BmeRI GACNNNNNGTC 1 cut(s) 531
BmiI GGNNCC 6 cut(s) 47, 133, 220, 279, 584, 647
BmrFI CCNGG 5 cut(s) 269, 575, 587, 626, 644
BmsI GCATC 2 cut(s) 441, 507
BplI GAGNNNNNCTC 2 cut(s) 373, 405
BpmI CTGGAG 1 cut(s) 549
Bpu10I CCTNAGC 1 cut(s) 6
Bpu14I TTCGAA 1 cut(s) 143
BpuEI CTTGAG 1 cut(s) 400
BpuMI CCSGG 3 cut(s) 269, 626, 644
BsaI GGTCTC 2 cut(s) 419, 485
BsaJI CCNNGG 8 cut(s) 40, 82, 135, 405, 429, 585, 625, 643
BsaWI WCCGGW 1 cut(s) 494
BsaXI ACNNNNNCTCC 4 cut(s) 489, 519, 522, 552
Bsc4I CCNNNNNNNGG 3 cut(s) 179, 274, 406
Bse118I RCCGGY 1 cut(s) 215
Bse1I ACTGG 4 cut(s) 61, 103, 173, 532
BseBI CCWGG 2 cut(s) 575, 587
BseDI CCNNGG 8 cut(s) 40, 82, 135, 405, 429, 585, 625, 643
BseGI GGATG 1 cut(s) 57
BseLI CCNNNNNNNGG 3 cut(s) 179, 274, 406
BseMII CTCAG 1 cut(s) 110
BseNI ACTGG 4 cut(s) 61, 103, 173, 532
BseRI GAGGAG 1 cut(s) 124
BseSI GKGCMC 1 cut(s) 185
BseX3I CGGCCG 1 cut(s) 640
BseXI GCAGC 2 cut(s) 37, 381
BseYI CCCAGC 1 cut(s) 280
BsgI GTGCAG 2 cut(s) 440, 506
Bsh1285I CGRYCG 1 cut(s) 643
BshNI GGYRCC 2 cut(s) 45, 218
BsiEI CGRYCG 1 cut(s) 643
BsiSI CCGG 5 cut(s) 216, 269, 495, 625, 643
BslFI GGGAC 2 cut(s) 263, 489
BslI CCNNNNNNNGG 3 cut(s) 179, 274, 406
BsmAI GTCTC 5 cut(s) 419, 452, 485, 492, 518
BsmBI CGTCTC 1 cut(s) 452
BsmFI GGGAC 2 cut(s) 263, 489
Bso31I GGTCTC 2 cut(s) 419, 485
Bsp119I TTCGAA 1 cut(s) 143
Bsp1286I GDGCHC 2 cut(s) 185, 207
Bsp143I GATC 2 cut(s) 386, 601
Bsp19I CCATGG 1 cut(s) 405
BspACI CCGC 5 cut(s) 19, 248, 285, 560, 639
BspCNI CTCAG 1 cut(s) 109
BspLI GGNNCC 6 cut(s) 47, 133, 220, 279, 584, 647
BspPI GGATC 1 cut(s) 609
BspT104I TTCGAA 1 cut(s) 143
BspT107I GGYRCC 2 cut(s) 45, 218
BspTNI GGTCTC 2 cut(s) 419, 485
BsrBI CCGCTC 1 cut(s) 287
BsrFI RCCGGY 1 cut(s) 215
BsrI ACTGG 4 cut(s) 61, 103, 173, 532
BssAI RCCGGY 1 cut(s) 215
BssECI CCNNGG 8 cut(s) 40, 82, 135, 405, 429, 585, 625, 643
BssMI GATC 2 cut(s) 386, 601
BssT1I CCWWGG 3 cut(s) 40, 82, 405
Bst2UI CCWGG 2 cut(s) 575, 587
Bst4CI ACNGT 1 cut(s) 670
Bst6I CTCTTC 1 cut(s) 197
BstBI TTCGAA 1 cut(s) 143
BstC8I GCNNGC 2 cut(s) 23, 562
BstDEI CTNAG 2 cut(s) 6, 96
BstDSI CCRYGG 2 cut(s) 405, 429
BstEII GGTNACC 1 cut(s) 86
BstF5I GGATG 1 cut(s) 57
BstKTI GATC 2 cut(s) 389, 604
BstMAI GTCTC 5 cut(s) 419, 452, 485, 492, 518
BstMBI GATC 2 cut(s) 386, 601
BstMCI CGRYCG 1 cut(s) 643
BstMWI GCNNNNNNNGC 3 cut(s) 636, 645, 654
BstNI CCWGG 2 cut(s) 575, 587
BstPI GGTNACC 1 cut(s) 86
BstSCI CCNGG 5 cut(s) 267, 573, 585, 624, 642
BstSLI GKGCMC 1 cut(s) 185
BstV1I GCAGC 2 cut(s) 37, 381
BstXI CCANNNNNNTGG 1 cut(s) 593
BstZI CGGCCG 1 cut(s) 640
BtgI CCRYGG 2 cut(s) 405, 429
BtgZI GCGATG 1 cut(s) 251
BtsCI GGATG 1 cut(s) 57
Cac8I GCNNGC 2 cut(s) 23, 562
Cfr10I RCCGGY 1 cut(s) 215
Csp6I GTAC 3 cut(s) 46, 100, 219
CspCI CAANNNNNGTGG 2 cut(s) 601, 636
CviAII CATG 1 cut(s) 406
CviQI GTAC 3 cut(s) 46, 100, 219
DdeI CTNAG 2 cut(s) 6, 96
DpnI GATC 2 cut(s) 388, 603
DpnII GATC 2 cut(s) 386, 601
DriI GACNNNNNGTC 1 cut(s) 531
EaeI YGGCCR 2 cut(s) 622, 640
EagI CGGCCG 1 cut(s) 640
Eam1104I CTCTTC 1 cut(s) 197
Eam1105I GACNNNNNGTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 197
EclXI CGGCCG 1 cut(s) 640
Eco130I CCWWGG 3 cut(s) 40, 82, 405
Eco24I GRGCYC 1 cut(s) 207
Eco31I GGTCTC 2 cut(s) 419, 485
Eco47I GGWCC 3 cut(s) 277, 370, 582
Eco52I CGGCCG 1 cut(s) 640
Eco91I GGTNACC 1 cut(s) 86
EcoO109I RGGNCCY 1 cut(s) 582
EcoO65I GGTNACC 1 cut(s) 86
EcoRII CCWGG 2 cut(s) 573, 585
EcoT14I CCWWGG 3 cut(s) 40, 82, 405
EcoT38I GRGCYC 1 cut(s) 207
ErhI CCWWGG 3 cut(s) 40, 82, 405
Esp3I CGTCTC 1 cut(s) 452
FaeI CATG 1 cut(s) 409
FaiI YATR 4 cut(s) 108, 260, 296, 407
FaqI GGGAC 2 cut(s) 263, 489
FatI CATG 1 cut(s) 405
FauI CCCGC 1 cut(s) 553
Fnu4HI GCNGC 4 cut(s) 26, 285, 395, 640
FokI GGATG 1 cut(s) 44
FriOI GRGCYC 1 cut(s) 207
Fsp4HI GCNGC 4 cut(s) 26, 285, 395, 640
FspBI CTAG 1 cut(s) 290
GluI GCNGC 4 cut(s) 26, 285, 395, 640
GsaI CCCAGC 1 cut(s) 284
GsuI CTGGAG 1 cut(s) 549
HapII CCGG 5 cut(s) 216, 269, 495, 625, 643
Hin1II CATG 1 cut(s) 409
HpaII CCGG 5 cut(s) 216, 269, 495, 625, 643
Hpy188III TCNNGA 1 cut(s) 673
HpyAV CCTTC 4 cut(s) 475, 584, 611, 647
HpyCH4III ACNGT 1 cut(s) 670
HpyCH4V TGCA 4 cut(s) 421, 454, 487, 520
HpyF10VI GCNNNNNNNGC 3 cut(s) 636, 645, 654
HpyF3I CTNAG 2 cut(s) 6, 96
Hsp92II CATG 1 cut(s) 409
KpnI GGTACC 2 cut(s) 49, 222
Kzo9I GATC 2 cut(s) 386, 601
LmnI GCTCC 1 cut(s) 137
Lsp1109I GCAGC 2 cut(s) 37, 381
LweI GCATC 2 cut(s) 441, 507
MaeI CTAG 1 cut(s) 290
MaeIII GTNAC 5 cut(s) 86, 307, 340, 374, 664
MalI GATC 2 cut(s) 388, 603
MbiI CCGCTC 1 cut(s) 287
MboI GATC 2 cut(s) 386, 601
MboII GAAGA 2 cut(s) 184, 460
MfeI CAATTG 1 cut(s) 156
MhlI GDGCHC 2 cut(s) 185, 207
MluCI AATT 1 cut(s) 156
MnlI CCTC 4 cut(s) 145, 176, 359, 524
MseI TTAA 1 cut(s) 660
MspA1I CMGCKG 1 cut(s) 21
MspI CCGG 5 cut(s) 216, 269, 495, 625, 643
MspR9I CCNGG 5 cut(s) 269, 575, 587, 626, 644
MunI CAATTG 1 cut(s) 156
MvaI CCWGG 2 cut(s) 575, 587
MwoI GCNNNNNNNGC 3 cut(s) 636, 645, 654
NciI CCSGG 3 cut(s) 269, 626, 644
NcoI CCATGG 1 cut(s) 405
NdeII GATC 2 cut(s) 386, 601
NlaIII CATG 1 cut(s) 409
NlaIV GGNNCC 6 cut(s) 47, 133, 220, 279, 584, 647
NmeAIII GCCGAG 2 cut(s) 116, 370
NmuCI GTSAC 2 cut(s) 307, 340
NspV TTCGAA 1 cut(s) 143
PcsI WCGNNNNNNNCGW 1 cut(s) 350
PflMI CCANNNNNTGG 1 cut(s) 406
PfoI TCCNGGA 1 cut(s) 573
PkrI GCNGC 4 cut(s) 27, 286, 396, 641
PpuMI RGGWCCY 1 cut(s) 582
Psp5II RGGWCCY 1 cut(s) 582
Psp6I CCWGG 2 cut(s) 573, 585
PspEI GGTNACC 1 cut(s) 86
PspFI CCCAGC 1 cut(s) 280
PspGI CCWGG 2 cut(s) 573, 585
PspN4I GGNNCC 6 cut(s) 47, 133, 220, 279, 584, 647
PspPPI RGGWCCY 1 cut(s) 582
RsaI GTAC 3 cut(s) 47, 101, 220
RsaNI GTAC 3 cut(s) 46, 100, 219
SaqAI TTAA 1 cut(s) 660
SatI GCNGC 4 cut(s) 26, 285, 395, 640
Sau3AI GATC 2 cut(s) 386, 601
ScrFI CCNGG 5 cut(s) 269, 575, 587, 626, 644
SduI GDGCHC 2 cut(s) 185, 207
SetI ASST 5 cut(s) 88, 486, 535, 595, 622
SfaNI GCATC 2 cut(s) 441, 507
SfuI TTCGAA 1 cut(s) 143
SinI GGWCC 3 cut(s) 277, 370, 582
SmlI CTYRAG 1 cut(s) 379
SmoI CTYRAG 1 cut(s) 379
Sse9I AATT 1 cut(s) 156
SsiI CCGC 5 cut(s) 19, 248, 285, 560, 639
SspI AATATT 1 cut(s) 148
SspMI CTAG 1 cut(s) 290
StyD4I CCNGG 5 cut(s) 267, 573, 585, 624, 642
StyI CCWWGG 3 cut(s) 40, 82, 405
TaaI ACNGT 1 cut(s) 670
TaqI TCGA 2 cut(s) 66, 143
TasI AATT 1 cut(s) 156
TauI GCSGC 2 cut(s) 287, 642
Tru1I TTAA 1 cut(s) 660
Tru9I TTAA 1 cut(s) 660
TseFI GTSAC 2 cut(s) 307, 340
TseI GCWGC 2 cut(s) 25, 394
Tsp45I GTSAC 2 cut(s) 307, 340
TspGWI ACGGA 1 cut(s) 362
Van91I CCANNNNNTGG 1 cut(s) 406
VpaK11BI GGWCC 3 cut(s) 277, 370, 582
XcmI CCANNNNNNNNNTGG 2 cut(s) 229, 436
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.