Rh7AG131000

Oleosin 16.4 kDa-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0004052
Physical Location & Seq
Forward (+)
10464209 .. 10464883
675 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG131000.1

Sequence Viewer

Length: 675 bp
ATGGCGGATCAGAGAAAGCAACATCAGCAGCAACAATACCGCGGTGTTGGCGATGATCAGCAGAGCCAGCAGTACTACGGCGGTGGCGGTGATCAGCAGTACCAGTACTCCTCGGACGCTAAGAGCCTCCTTCCCCAACATGGACCCTCCGCCTCACAAGTCATTGCAGTCATAACTCTTGTTCCTCTCGGTGGGACCCTCCTACTGCTCGCCGGCCTCACACTGGCCGGAACTTTCATTGGGATGGCCCTCTCGACGCCGCTGTTTGTGATTTTCAGCCCGATTTTGGTGCCGGCTATTGCCACCATCGGCTTGGCGGTGGCCGGCATTTTGACCTCGGGGGCTTTCGGGATCACGGGGCTCTCGTCTTTCTCGTGGTTGGCCAACTATCTGAGACGCACGCATCTGCCGCAGCAGGCAATCCGGGGTGTGCAGGAGACTTCGGGCCAGTTGACGCATAAGGCTAGGGATCTGGGCCACACTGTCTCTGAAAAGACCCAGGAAGCTGGCCAAGCTGTCCAGGGGAAGGCCCAAGAAGTGGACCAGGCTGTGCAGAGCAAGGCCCAAGAAGAGGGTCAGAATGTCCAAAGCAAGGCCCAAGAAGCAGGACAGAAGGCCCAGGATACTGGAAGGAGTCACGAAGGCGGTAGAGCTCGGGATGTGAAGGTGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oleosin

Protein Analysis

224

Amino Acids

23.75

Weight (kDa)

8.0

Isoelectric Point (pI)

45.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oleosin PF01277 52 - 162 8.5e-36 Oleosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 289
AccB7I CCANNNNNTGG 1 cut(s) 538
AccII CGCG 1 cut(s) 42
AclWI GGATC 3 cut(s) 15, 359, 477
AcoI YGGCCR 4 cut(s) 225, 321, 381, 508
AcyI GRCGYC 1 cut(s) 257
AfaI GTAC 3 cut(s) 74, 101, 107
AfiI CCNNNNNNNGG 8 cut(s) 140, 191, 223, 286, 526, 538, 571, 592
AjnI CCWGG 4 cut(s) 498, 519, 543, 618
AluBI AGCT 3 cut(s) 506, 515, 653
AluI AGCT 3 cut(s) 506, 515, 653
Alw21I GWGCWC 1 cut(s) 655
Alw26I GTCTC 3 cut(s) 388, 431, 490
AlwI GGATC 3 cut(s) 15, 359, 477
Ama87I CYCGRG 2 cut(s) 337, 654
ApeKI GCWGC 2 cut(s) 28, 412
AsuC2I CCSGG 1 cut(s) 425
AsuHPI GGTGA 1 cut(s) 101
AvaI CYCGRG 2 cut(s) 337, 654
AvaII GGWCC 3 cut(s) 143, 195, 541
BalI TGGCCA 2 cut(s) 383, 510
BanI GGYRCC 1 cut(s) 289
BanII GRGCYC 2 cut(s) 363, 655
BauI CACGAG 1 cut(s) 373
Bbv12I GWGCWC 1 cut(s) 655
BbvI GCAGC 2 cut(s) 40, 424
BccI CCATC 2 cut(s) 238, 314
BceAI ACGGC 1 cut(s) 94
BcgI CGANNNNNNTGC 2 cut(s) 271, 305
BciT130I CCWGG 4 cut(s) 500, 521, 545, 620
BciVI GTATCC 1 cut(s) 616
BclI TGATCA 2 cut(s) 55, 91
BcnI CCSGG 1 cut(s) 425
BcoDI GTCTC 3 cut(s) 388, 431, 490
BfaI CTAG 1 cut(s) 465
BfuI GTATCC 1 cut(s) 616
BisI GCNGC 4 cut(s) 29, 260, 410, 413
BlsI GCNGC 4 cut(s) 30, 261, 411, 414
BmcAI AGTACT 2 cut(s) 74, 107
Bme1390I CCNGG 5 cut(s) 425, 500, 521, 545, 620
Bme18I GGWCC 3 cut(s) 143, 195, 541
BmeT110I CYCGRG 2 cut(s) 337, 654
BmiI GGNNCC 4 cut(s) 145, 196, 197, 291
BmrFI CCNGG 5 cut(s) 425, 500, 521, 545, 620
BmsI GCATC 1 cut(s) 412
BpuMI CCSGG 1 cut(s) 425
BsaHI GRCGYC 1 cut(s) 257
BsaJI CCNNGG 7 cut(s) 40, 111, 336, 424, 498, 520, 618
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 8 cut(s) 140, 191, 223, 286, 526, 538, 571, 592
Bse118I RCCGGY 3 cut(s) 212, 292, 323
Bse1I ACTGG 4 cut(s) 103, 228, 448, 631
Bse3DI GCAATG 1 cut(s) 162
BseBI CCWGG 4 cut(s) 500, 521, 545, 620
BseDI CCNNGG 7 cut(s) 40, 111, 336, 424, 498, 520, 618
BseGI GGATG 2 cut(s) 249, 664
BseLI CCNNNNNNNGG 8 cut(s) 140, 191, 223, 286, 526, 538, 571, 592
BseMI GCAATG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 383
BseNI ACTGG 4 cut(s) 103, 228, 448, 631
BseRI GAGGAG 1 cut(s) 100
BseXI GCAGC 2 cut(s) 40, 424
BsgI GTGCAG 2 cut(s) 452, 572
Bsh1236I CGCG 1 cut(s) 42
BshNI GGYRCC 1 cut(s) 289
BsiHKAI GWGCWC 1 cut(s) 655
BsiHKCI CYCGRG 2 cut(s) 337, 654
BsiSI CCGG 5 cut(s) 213, 228, 293, 324, 424
BslFI GGGAC 1 cut(s) 208
BslI CCNNNNNNNGG 8 cut(s) 140, 191, 223, 286, 526, 538, 571, 592
BsmAI GTCTC 3 cut(s) 388, 431, 490
BsmBI CGTCTC 1 cut(s) 388
BsmFI GGGAC 1 cut(s) 208
BsoBI CYCGRG 2 cut(s) 337, 654
Bsp1286I GDGCHC 2 cut(s) 363, 655
Bsp143I GATC 5 cut(s) 7, 55, 91, 351, 469
BspCNI CTCAG 1 cut(s) 384
BspFNI CGCG 1 cut(s) 42
BspLI GGNNCC 4 cut(s) 145, 196, 197, 291
BspPI GGATC 3 cut(s) 15, 359, 477
BspT107I GGYRCC 1 cut(s) 289
BsrDI GCAATG 1 cut(s) 162
BsrFI RCCGGY 3 cut(s) 212, 292, 323
BsrI ACTGG 4 cut(s) 103, 228, 448, 631
BssAI RCCGGY 3 cut(s) 212, 292, 323
BssECI CCNNGG 7 cut(s) 40, 111, 336, 424, 498, 520, 618
BssMI GATC 5 cut(s) 7, 55, 91, 351, 469
BssNI GRCGYC 1 cut(s) 257
BssSI CACGAG 1 cut(s) 373
Bst2BI CACGAG 1 cut(s) 373
Bst2UI CCWGG 4 cut(s) 500, 521, 545, 620
Bst4CI ACNGT 1 cut(s) 484
Bst6I CTCTTC 1 cut(s) 564
BstACI GRCGYC 1 cut(s) 257
BstC8I GCNNGC 8 cut(s) 68, 210, 214, 294, 325, 401, 417, 508
BstDEI CTNAG 2 cut(s) 120, 392
BstDSI CCRYGG 1 cut(s) 40
BstF5I GGATG 2 cut(s) 249, 664
BstFNI CGCG 1 cut(s) 42
BstKTI GATC 5 cut(s) 10, 58, 94, 354, 472
BstMAI GTCTC 3 cut(s) 388, 431, 490
BstMBI GATC 5 cut(s) 7, 55, 91, 351, 469
BstMWI GCNNNNNNNGC 6 cut(s) 25, 48, 67, 409, 512, 602
BstNI CCWGG 4 cut(s) 500, 521, 545, 620
BstSCI CCNGG 5 cut(s) 423, 498, 519, 543, 618
BstUI CGCG 1 cut(s) 42
BstV1I GCAGC 2 cut(s) 40, 424
BstX2I RGATCY 1 cut(s) 469
BstXI CCANNNNNNTGG 3 cut(s) 313, 506, 626
BstYI RGATCY 1 cut(s) 469
BsuI GTATCC 1 cut(s) 616
BtgI CCRYGG 1 cut(s) 40
BtgZI GCGATG 1 cut(s) 66
BtsCI GGATG 2 cut(s) 249, 664
BtsIMutI CAGTG 2 cut(s) 221, 480
Cac8I GCNNGC 8 cut(s) 68, 210, 214, 294, 325, 401, 417, 508
Cfr10I RCCGGY 3 cut(s) 212, 292, 323
Cfr42I CCGCGG 1 cut(s) 43
CseI GACGC 4 cut(s) 125, 265, 405, 463
Csp6I GTAC 3 cut(s) 73, 100, 106
CviAII CATG 1 cut(s) 140
CviQI GTAC 3 cut(s) 73, 100, 106
DdeI CTNAG 2 cut(s) 120, 392
DpnI GATC 5 cut(s) 9, 57, 93, 353, 471
DpnII GATC 5 cut(s) 7, 55, 91, 351, 469
EaeI YGGCCR 4 cut(s) 225, 321, 381, 508
Eam1104I CTCTTC 1 cut(s) 564
EarI CTCTTC 1 cut(s) 564
EciI GGCGGA 2 cut(s) 20, 139
Ecl136II GAGCTC 1 cut(s) 653
Eco24I GRGCYC 2 cut(s) 363, 655
Eco47I GGWCC 3 cut(s) 143, 195, 541
Eco53kI GAGCTC 1 cut(s) 653
Eco88I CYCGRG 2 cut(s) 337, 654
EcoICRI GAGCTC 1 cut(s) 653
EcoO109I RGGNCCY 1 cut(s) 195
EcoRII CCWGG 4 cut(s) 498, 519, 543, 618
EcoT38I GRGCYC 2 cut(s) 363, 655
Esp3I CGTCTC 1 cut(s) 388
FaeI CATG 1 cut(s) 143
FaiI YATR 4 cut(s) 141, 173, 459, 673
FaqI GGGAC 1 cut(s) 208
FatI CATG 1 cut(s) 139
FbaI TGATCA 2 cut(s) 55, 91
Fnu4HI GCNGC 4 cut(s) 29, 260, 410, 413
FokI GGATG 2 cut(s) 256, 671
FriOI GRGCYC 2 cut(s) 363, 655
Fsp4HI GCNGC 4 cut(s) 29, 260, 410, 413
FspBI CTAG 1 cut(s) 465
GluI GCNGC 4 cut(s) 29, 260, 410, 413
HapII CCGG 5 cut(s) 213, 228, 293, 324, 424
HgaI GACGC 4 cut(s) 125, 265, 405, 463
Hin1I GRCGYC 1 cut(s) 257
Hin1II CATG 1 cut(s) 143
HincII GTYRAC 1 cut(s) 453
HindII GTYRAC 1 cut(s) 453
HinfI GANTC 1 cut(s) 634
HpaII CCGG 5 cut(s) 213, 228, 293, 324, 424
HphI GGTGA 1 cut(s) 101
Hpy166II GTNNAC 2 cut(s) 453, 541
Hpy188I TCNGA 5 cut(s) 12, 115, 393, 490, 579
Hpy188III TCNNGA 4 cut(s) 253, 349, 638, 656
Hpy8I GTNNAC 2 cut(s) 453, 541
Hpy99I CGWCG 1 cut(s) 259
HpyAV CCTTC 6 cut(s) 140, 520, 607, 624, 635, 658
HpyCH4III ACNGT 1 cut(s) 484
HpyCH4V TGCA 3 cut(s) 167, 433, 553
HpyF10VI GCNNNNNNNGC 6 cut(s) 25, 48, 67, 409, 512, 602
HpyF3I CTNAG 2 cut(s) 120, 392
Hsp92I GRCGYC 1 cut(s) 257
Hsp92II CATG 1 cut(s) 143
KflI GGGWCCC 1 cut(s) 195
KroI GCCGGC 3 cut(s) 212, 292, 323
KroNI GCCGGC 3 cut(s) 214, 294, 325
Ksp22I TGATCA 2 cut(s) 55, 91
KspI CCGCGG 1 cut(s) 43
Kzo9I GATC 5 cut(s) 7, 55, 91, 351, 469
Lsp1109I GCAGC 2 cut(s) 40, 424
LweI GCATC 1 cut(s) 412
MaeI CTAG 1 cut(s) 465
MaeIII GTNAC 2 cut(s) 635, 667
MalI GATC 5 cut(s) 9, 57, 93, 353, 471
MboI GATC 5 cut(s) 7, 55, 91, 351, 469
MboII GAAGA 1 cut(s) 581
MflI RGATCY 1 cut(s) 469
MhlI GDGCHC 2 cut(s) 363, 655
MlsI TGGCCA 2 cut(s) 383, 510
MluNI TGGCCA 2 cut(s) 383, 510
MlyI GAGTC 1 cut(s) 643
Mox20I TGGCCA 2 cut(s) 383, 510
MroNI GCCGGC 3 cut(s) 212, 292, 323
MscI TGGCCA 2 cut(s) 383, 510
MslI CAYNNNNRTG 1 cut(s) 242
Msp20I TGGCCA 2 cut(s) 383, 510
MspA1I CMGCKG 2 cut(s) 42, 262
MspI CCGG 5 cut(s) 213, 228, 293, 324, 424
MspR9I CCNGG 5 cut(s) 425, 500, 521, 545, 620
MvaI CCWGG 4 cut(s) 500, 521, 545, 620
MvnI CGCG 1 cut(s) 42
MwoI GCNNNNNNNGC 6 cut(s) 25, 48, 67, 409, 512, 602
NaeI GCCGGC 3 cut(s) 214, 294, 325
NciI CCSGG 1 cut(s) 425
NdeII GATC 5 cut(s) 7, 55, 91, 351, 469
NgoMIV GCCGGC 3 cut(s) 212, 292, 323
NlaIII CATG 1 cut(s) 143
NlaIV GGNNCC 4 cut(s) 145, 196, 197, 291
NmuCI GTSAC 2 cut(s) 635, 667
PcsI WCGNNNNNNNCGW 2 cut(s) 362, 371
PdiI GCCGGC 3 cut(s) 214, 294, 325
PflMI CCANNNNNTGG 1 cut(s) 538
PkrI GCNGC 4 cut(s) 30, 261, 411, 414
PleI GAGTC 1 cut(s) 642
PpsI GAGTC 1 cut(s) 642
PpuMI RGGWCCY 1 cut(s) 195
Psp124BI GAGCTC 1 cut(s) 655
Psp5II RGGWCCY 1 cut(s) 195
Psp6I CCWGG 4 cut(s) 498, 519, 543, 618
PspGI CCWGG 4 cut(s) 498, 519, 543, 618
PspN4I GGNNCC 4 cut(s) 145, 196, 197, 291
PspPPI RGGWCCY 1 cut(s) 195
PsuI RGATCY 1 cut(s) 469
RsaI GTAC 3 cut(s) 74, 101, 107
RsaNI GTAC 3 cut(s) 73, 100, 106
RseI CAYNNNNRTG 1 cut(s) 242
SacI GAGCTC 1 cut(s) 655
SacII CCGCGG 1 cut(s) 43
SatI GCNGC 4 cut(s) 29, 260, 410, 413
Sau3AI GATC 5 cut(s) 7, 55, 91, 351, 469
ScaI AGTACT 2 cut(s) 74, 107
SchI GAGTC 1 cut(s) 643
ScrFI CCNGG 5 cut(s) 425, 500, 521, 545, 620
SduI GDGCHC 2 cut(s) 363, 655
SetI ASST 5 cut(s) 338, 508, 517, 655, 669
SfaNI GCATC 1 cut(s) 412
Sfr303I CCGCGG 1 cut(s) 43
SgrBI CCGCGG 1 cut(s) 43
SinI GGWCC 3 cut(s) 143, 195, 541
SmiMI CAYNNNNRTG 1 cut(s) 242
SspMI CTAG 1 cut(s) 465
SstI GAGCTC 1 cut(s) 655
StyD4I CCNGG 5 cut(s) 423, 498, 519, 543, 618
TaaI ACNGT 1 cut(s) 484
TaqI TCGA 1 cut(s) 254
TatI WGTACW 2 cut(s) 72, 105
TauI GCSGC 2 cut(s) 262, 412
TscAI CASTG 2 cut(s) 228, 487
TseFI GTSAC 2 cut(s) 635, 667
TseI GCWGC 2 cut(s) 28, 412
Tsp45I GTSAC 2 cut(s) 635, 667
TspDTI ATGAA 1 cut(s) 226
TspRI CASTG 2 cut(s) 228, 487
Van91I CCANNNNNTGG 1 cut(s) 538
VpaK11BI GGWCC 3 cut(s) 143, 195, 541
XcmI CCANNNNNNNNNTGG 1 cut(s) 310
XspI CTAG 1 cut(s) 465
ZrmI AGTACT 2 cut(s) 74, 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.