Rw7G011170

Oleosin 16.4 kDa-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004052
Physical Location & Seq
Forward (+)
10452543 .. 10453587
1045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G011170.1

Sequence Viewer

Length: 684 bp
ATGGCGGATCAGAGAAAGCAACATCAGCAACAACAATACCGCGGTGTTGGCGATGATCAGCAGAGCCAGCAGTACTACGGCGGTGGCGGTGATCAGCAGAATCAGCAGTACCAGTACTCCTCGGACGCTAAGAGCCTCCTTCCCCAACATGGACCCTCCGCCTCACAAGTCATTGCAGTCATAACTCTTGTTCCTCTCGGTGGGACCCTCCTACTGCTCGCCGGCCTCACACTGGCCGGAACTTTCATTGGGATGGCCCTCTCGACGCCGCTGTTTGTGATTTTCAGTCCTATTTTGGTGCCGGCTATTGCCACCATCGGCTTGGCGGTGGCCGGCATTTTGACCTCGGGGGCTTTCGGGATCACGGGGCTCTCGTCTTTCTCGTGGTTGGCCAACTATCTGAGACGCACGCATCTGCCGCAGCAGGCAATCCGGGGTGTGCAGGACACTTCGGGCCAGTTGACGCATAAGGCTAGGGATCTGGGCCACACTGTCTCCGAAAAGACCCAGGAAGCTGGCCAAGCTGTCCAGGGGAAGGCCCAAGAAGTGGACCAGGCTGTGCAGAGCAAGGCCCAAGAAGAGGGTCAGAATGTCCAAAGAAAGGCCCAAGAAGCAGGACAGAAGGCCCAGGATACTGGAAGGAGTCACGAAGGCGGTAGAGCTCGGGATGTGAAGGTGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oleosin

Protein Analysis

227

Amino Acids

24.18

Weight (kDa)

8.86

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oleosin PF01277 55 - 163 1.2e-35 Oleosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 298
AccB7I CCANNNNNTGG 1 cut(s) 547
AccII CGCG 1 cut(s) 42
AclWI GGATC 3 cut(s) 15, 368, 486
AcoI YGGCCR 4 cut(s) 234, 330, 390, 517
AcyI GRCGYC 1 cut(s) 266
AfaI GTAC 3 cut(s) 74, 110, 116
AfiI CCNNNNNNNGG 7 cut(s) 149, 200, 232, 535, 547, 580, 601
AjnI CCWGG 4 cut(s) 507, 528, 552, 627
AluBI AGCT 3 cut(s) 515, 524, 662
AluI AGCT 3 cut(s) 515, 524, 662
Alw21I GWGCWC 1 cut(s) 664
Alw26I GTCTC 2 cut(s) 397, 499
AlwI GGATC 3 cut(s) 15, 368, 486
Ama87I CYCGRG 2 cut(s) 346, 663
ApeKI GCWGC 1 cut(s) 421
AsuC2I CCSGG 1 cut(s) 434
AsuHPI GGTGA 1 cut(s) 101
AvaI CYCGRG 2 cut(s) 346, 663
AvaII GGWCC 3 cut(s) 152, 204, 550
BalI TGGCCA 2 cut(s) 392, 519
BanI GGYRCC 1 cut(s) 298
BanII GRGCYC 2 cut(s) 372, 664
BauI CACGAG 1 cut(s) 382
Bbv12I GWGCWC 1 cut(s) 664
BbvI GCAGC 1 cut(s) 433
BccI CCATC 2 cut(s) 247, 323
BceAI ACGGC 1 cut(s) 94
BciT130I CCWGG 4 cut(s) 509, 530, 554, 629
BciVI GTATCC 1 cut(s) 625
BclI TGATCA 2 cut(s) 55, 91
BcnI CCSGG 1 cut(s) 434
BcoDI GTCTC 2 cut(s) 397, 499
BfaI CTAG 1 cut(s) 474
BfuI GTATCC 1 cut(s) 625
BisI GCNGC 3 cut(s) 269, 419, 422
BlsI GCNGC 3 cut(s) 270, 420, 423
BmcAI AGTACT 2 cut(s) 74, 116
Bme1390I CCNGG 5 cut(s) 434, 509, 530, 554, 629
Bme18I GGWCC 3 cut(s) 152, 204, 550
BmeT110I CYCGRG 2 cut(s) 346, 663
BmiI GGNNCC 4 cut(s) 154, 205, 206, 300
BmrFI CCNGG 5 cut(s) 434, 509, 530, 554, 629
BmsI GCATC 1 cut(s) 421
BpuMI CCSGG 1 cut(s) 434
BsaHI GRCGYC 1 cut(s) 266
BsaJI CCNNGG 7 cut(s) 40, 120, 345, 433, 507, 529, 627
BsaXI ACNNNNNCTCC 4 cut(s) 101, 131, 479, 509
Bsc4I CCNNNNNNNGG 7 cut(s) 149, 200, 232, 535, 547, 580, 601
Bse118I RCCGGY 3 cut(s) 221, 301, 332
Bse1I ACTGG 4 cut(s) 112, 237, 457, 640
Bse3DI GCAATG 1 cut(s) 171
BseBI CCWGG 4 cut(s) 509, 530, 554, 629
BseDI CCNNGG 7 cut(s) 40, 120, 345, 433, 507, 529, 627
BseGI GGATG 2 cut(s) 258, 673
BseLI CCNNNNNNNGG 7 cut(s) 149, 200, 232, 535, 547, 580, 601
BseMI GCAATG 1 cut(s) 171
BseMII CTCAG 1 cut(s) 392
BseNI ACTGG 4 cut(s) 112, 237, 457, 640
BseRI GAGGAG 1 cut(s) 109
BseXI GCAGC 1 cut(s) 433
BsgI GTGCAG 2 cut(s) 461, 581
Bsh1236I CGCG 1 cut(s) 42
BshNI GGYRCC 1 cut(s) 298
BsiHKAI GWGCWC 1 cut(s) 664
BsiHKCI CYCGRG 2 cut(s) 346, 663
BsiSI CCGG 5 cut(s) 222, 237, 302, 333, 433
BslFI GGGAC 1 cut(s) 217
BslI CCNNNNNNNGG 7 cut(s) 149, 200, 232, 535, 547, 580, 601
BsmAI GTCTC 2 cut(s) 397, 499
BsmBI CGTCTC 1 cut(s) 397
BsmFI GGGAC 1 cut(s) 217
BsoBI CYCGRG 2 cut(s) 346, 663
Bsp1286I GDGCHC 2 cut(s) 372, 664
Bsp143I GATC 5 cut(s) 7, 55, 91, 360, 478
BspCNI CTCAG 1 cut(s) 393
BspFNI CGCG 1 cut(s) 42
BspLI GGNNCC 4 cut(s) 154, 205, 206, 300
BspPI GGATC 3 cut(s) 15, 368, 486
BspT107I GGYRCC 1 cut(s) 298
BsrDI GCAATG 1 cut(s) 171
BsrFI RCCGGY 3 cut(s) 221, 301, 332
BsrI ACTGG 4 cut(s) 112, 237, 457, 640
BssAI RCCGGY 3 cut(s) 221, 301, 332
BssECI CCNNGG 7 cut(s) 40, 120, 345, 433, 507, 529, 627
BssMI GATC 5 cut(s) 7, 55, 91, 360, 478
BssNI GRCGYC 1 cut(s) 266
BssSI CACGAG 1 cut(s) 382
Bst2BI CACGAG 1 cut(s) 382
Bst2UI CCWGG 4 cut(s) 509, 530, 554, 629
Bst4CI ACNGT 1 cut(s) 493
Bst6I CTCTTC 1 cut(s) 573
BstACI GRCGYC 1 cut(s) 266
BstC8I GCNNGC 8 cut(s) 68, 219, 223, 303, 334, 410, 426, 517
BstDEI CTNAG 2 cut(s) 129, 401
BstDSI CCRYGG 1 cut(s) 40
BstF5I GGATG 2 cut(s) 258, 673
BstFNI CGCG 1 cut(s) 42
BstKTI GATC 5 cut(s) 10, 58, 94, 363, 481
BstMAI GTCTC 2 cut(s) 397, 499
BstMBI GATC 5 cut(s) 7, 55, 91, 360, 478
BstMWI GCNNNNNNNGC 7 cut(s) 25, 48, 67, 103, 418, 521, 611
BstNI CCWGG 4 cut(s) 509, 530, 554, 629
BstSCI CCNGG 5 cut(s) 432, 507, 528, 552, 627
BstUI CGCG 1 cut(s) 42
BstV1I GCAGC 1 cut(s) 433
BstX2I RGATCY 1 cut(s) 478
BstXI CCANNNNNNTGG 3 cut(s) 322, 515, 635
BstYI RGATCY 1 cut(s) 478
BsuI GTATCC 1 cut(s) 625
BtgI CCRYGG 1 cut(s) 40
BtgZI GCGATG 1 cut(s) 66
BtsCI GGATG 2 cut(s) 258, 673
BtsIMutI CAGTG 2 cut(s) 230, 489
Cac8I GCNNGC 8 cut(s) 68, 219, 223, 303, 334, 410, 426, 517
Cfr10I RCCGGY 3 cut(s) 221, 301, 332
Cfr42I CCGCGG 1 cut(s) 43
CseI GACGC 4 cut(s) 134, 274, 414, 472
Csp6I GTAC 3 cut(s) 73, 109, 115
CviAII CATG 1 cut(s) 149
CviQI GTAC 3 cut(s) 73, 109, 115
DdeI CTNAG 2 cut(s) 129, 401
DpnI GATC 5 cut(s) 9, 57, 93, 362, 480
DpnII GATC 5 cut(s) 7, 55, 91, 360, 478
EaeI YGGCCR 4 cut(s) 234, 330, 390, 517
Eam1104I CTCTTC 1 cut(s) 573
EarI CTCTTC 1 cut(s) 573
EciI GGCGGA 2 cut(s) 20, 148
Ecl136II GAGCTC 1 cut(s) 662
Eco24I GRGCYC 2 cut(s) 372, 664
Eco47I GGWCC 3 cut(s) 152, 204, 550
Eco53kI GAGCTC 1 cut(s) 662
Eco88I CYCGRG 2 cut(s) 346, 663
EcoICRI GAGCTC 1 cut(s) 662
EcoO109I RGGNCCY 1 cut(s) 204
EcoRII CCWGG 4 cut(s) 507, 528, 552, 627
EcoT38I GRGCYC 2 cut(s) 372, 664
Esp3I CGTCTC 1 cut(s) 397
FaeI CATG 1 cut(s) 152
FaiI YATR 4 cut(s) 150, 182, 468, 682
FaqI GGGAC 1 cut(s) 217
FatI CATG 1 cut(s) 148
FbaI TGATCA 2 cut(s) 55, 91
Fnu4HI GCNGC 3 cut(s) 269, 419, 422
FokI GGATG 2 cut(s) 265, 680
FriOI GRGCYC 2 cut(s) 372, 664
Fsp4HI GCNGC 3 cut(s) 269, 419, 422
FspBI CTAG 1 cut(s) 474
GluI GCNGC 3 cut(s) 269, 419, 422
HapII CCGG 5 cut(s) 222, 237, 302, 333, 433
HgaI GACGC 4 cut(s) 134, 274, 414, 472
Hin1I GRCGYC 1 cut(s) 266
Hin1II CATG 1 cut(s) 152
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HinfI GANTC 2 cut(s) 100, 643
HpaII CCGG 5 cut(s) 222, 237, 302, 333, 433
HphI GGTGA 1 cut(s) 101
Hpy166II GTNNAC 2 cut(s) 462, 550
Hpy188I TCNGA 5 cut(s) 12, 124, 402, 499, 588
Hpy188III TCNNGA 4 cut(s) 262, 358, 647, 665
Hpy8I GTNNAC 2 cut(s) 462, 550
Hpy99I CGWCG 1 cut(s) 268
HpyAV CCTTC 6 cut(s) 149, 529, 616, 633, 644, 667
HpyCH4III ACNGT 1 cut(s) 493
HpyCH4V TGCA 3 cut(s) 176, 442, 562
HpyF10VI GCNNNNNNNGC 7 cut(s) 25, 48, 67, 103, 418, 521, 611
HpyF3I CTNAG 2 cut(s) 129, 401
Hsp92I GRCGYC 1 cut(s) 266
Hsp92II CATG 1 cut(s) 152
KflI GGGWCCC 1 cut(s) 204
KroI GCCGGC 3 cut(s) 221, 301, 332
KroNI GCCGGC 3 cut(s) 223, 303, 334
Ksp22I TGATCA 2 cut(s) 55, 91
KspI CCGCGG 1 cut(s) 43
Kzo9I GATC 5 cut(s) 7, 55, 91, 360, 478
Lsp1109I GCAGC 1 cut(s) 433
LweI GCATC 1 cut(s) 421
MaeI CTAG 1 cut(s) 474
MaeIII GTNAC 2 cut(s) 644, 676
MalI GATC 5 cut(s) 9, 57, 93, 362, 480
MboI GATC 5 cut(s) 7, 55, 91, 360, 478
MboII GAAGA 1 cut(s) 590
MflI RGATCY 1 cut(s) 478
MhlI GDGCHC 2 cut(s) 372, 664
MlsI TGGCCA 2 cut(s) 392, 519
MluNI TGGCCA 2 cut(s) 392, 519
MlyI GAGTC 1 cut(s) 652
Mox20I TGGCCA 2 cut(s) 392, 519
MroNI GCCGGC 3 cut(s) 221, 301, 332
MscI TGGCCA 2 cut(s) 392, 519
MslI CAYNNNNRTG 1 cut(s) 251
Msp20I TGGCCA 2 cut(s) 392, 519
MspA1I CMGCKG 2 cut(s) 42, 271
MspI CCGG 5 cut(s) 222, 237, 302, 333, 433
MspR9I CCNGG 5 cut(s) 434, 509, 530, 554, 629
MvaI CCWGG 4 cut(s) 509, 530, 554, 629
MvnI CGCG 1 cut(s) 42
MwoI GCNNNNNNNGC 7 cut(s) 25, 48, 67, 103, 418, 521, 611
NaeI GCCGGC 3 cut(s) 223, 303, 334
NciI CCSGG 1 cut(s) 434
NdeII GATC 5 cut(s) 7, 55, 91, 360, 478
NgoMIV GCCGGC 3 cut(s) 221, 301, 332
NlaIII CATG 1 cut(s) 152
NlaIV GGNNCC 4 cut(s) 154, 205, 206, 300
NmuCI GTSAC 2 cut(s) 644, 676
PcsI WCGNNNNNNNCGW 2 cut(s) 371, 380
PdiI GCCGGC 3 cut(s) 223, 303, 334
PfeI GAWTC 1 cut(s) 100
PflMI CCANNNNNTGG 1 cut(s) 547
PkrI GCNGC 3 cut(s) 270, 420, 423
PleI GAGTC 1 cut(s) 651
PpsI GAGTC 1 cut(s) 651
PpuMI RGGWCCY 1 cut(s) 204
Psp124BI GAGCTC 1 cut(s) 664
Psp5II RGGWCCY 1 cut(s) 204
Psp6I CCWGG 4 cut(s) 507, 528, 552, 627
PspGI CCWGG 4 cut(s) 507, 528, 552, 627
PspN4I GGNNCC 4 cut(s) 154, 205, 206, 300
PspPPI RGGWCCY 1 cut(s) 204
PsuI RGATCY 1 cut(s) 478
RsaI GTAC 3 cut(s) 74, 110, 116
RsaNI GTAC 3 cut(s) 73, 109, 115
RseI CAYNNNNRTG 1 cut(s) 251
SacI GAGCTC 1 cut(s) 664
SacII CCGCGG 1 cut(s) 43
SatI GCNGC 3 cut(s) 269, 419, 422
Sau3AI GATC 5 cut(s) 7, 55, 91, 360, 478
ScaI AGTACT 2 cut(s) 74, 116
SchI GAGTC 1 cut(s) 652
ScrFI CCNGG 5 cut(s) 434, 509, 530, 554, 629
SduI GDGCHC 2 cut(s) 372, 664
SetI ASST 5 cut(s) 347, 517, 526, 664, 678
SfaNI GCATC 1 cut(s) 421
Sfr303I CCGCGG 1 cut(s) 43
SgrBI CCGCGG 1 cut(s) 43
SinI GGWCC 3 cut(s) 152, 204, 550
SmiMI CAYNNNNRTG 1 cut(s) 251
SspMI CTAG 1 cut(s) 474
SstI GAGCTC 1 cut(s) 664
StyD4I CCNGG 5 cut(s) 432, 507, 528, 552, 627
TaaI ACNGT 1 cut(s) 493
TaqI TCGA 1 cut(s) 263
TatI WGTACW 2 cut(s) 72, 114
TauI GCSGC 2 cut(s) 271, 421
TfiI GAWTC 1 cut(s) 100
TscAI CASTG 2 cut(s) 237, 496
TseFI GTSAC 2 cut(s) 644, 676
TseI GCWGC 1 cut(s) 421
Tsp45I GTSAC 2 cut(s) 644, 676
TspDTI ATGAA 1 cut(s) 235
TspRI CASTG 2 cut(s) 237, 496
Van91I CCANNNNNTGG 1 cut(s) 547
VpaK11BI GGWCC 3 cut(s) 152, 204, 550
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XspI CTAG 1 cut(s) 474
ZrmI AGTACT 2 cut(s) 74, 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.