Rorug07G0005300

Oleosin 16.4 kDa-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
419737 .. 421044
1308 bp
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UTR
Exon/CDS
Intron
Rorug07G0005300.1

Sequence Viewer

Length: 426 bp
ATGGAAATATGTACAGTTTCTTTAGAGCTAATTGCCTTTTTGGGTTTTCTTTGCAGCTCAAAACTTGAAGGAAGGTCACCAAGTTGCAGGCTCTCGCTCTCACACGAAGTATCATTAAGTTTCGTTTTATTAGCTTATTTGCCAGATTTGGGGAATAGTTTTCAGCAAGAAAAGAGTGCATTGAGAGGCCACAAACGTGACCACACACAGTCTTCAGTCAAGTCATCTGTTGAACTGAAATGCTTTTATAGCTGTTTTTACCCCAATTCGTTAGTTCTTTCTGCTTTGTTTATTAAGTTTCAGATCACAACCCTTGCAAATGCAATTGAAGAGATGTTAGATTGCTCAAAAGTCATTGGTAGAAGACTCATCGAAGCAGCTAAAATAACAGCTGACTTAAGTGGGGCAATAGCCCTTACCCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

141

Amino Acids

15.54

Weight (kDa)

8.24

Isoelectric Point (pI)

53.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 198
AfaI GTAC 1 cut(s) 13
AfiI CCNNNNNNNGG 1 cut(s) 149
AflII CTTAAG 1 cut(s) 397
AgsI TTSAA 3 cut(s) 68, 233, 329
AleI CACNNNNGTG 1 cut(s) 195
AluBI AGCT 6 cut(s) 28, 57, 134, 252, 380, 392
AluI AGCT 6 cut(s) 28, 57, 134, 252, 380, 392
AoxI GGCC 1 cut(s) 187
ApeKI GCWGC 2 cut(s) 54, 377
AsuHPI GGTGA 1 cut(s) 69
BbsI GAAGAC 2 cut(s) 204, 370
BbvI GCAGC 2 cut(s) 66, 389
BfrI CTTAAG 1 cut(s) 397
BisI GCNGC 2 cut(s) 55, 378
BlsI GCNGC 2 cut(s) 56, 379
BpiI GAAGAC 2 cut(s) 204, 370
Bsc4I CCNNNNNNNGG 1 cut(s) 149
BseLI CCNNNNNNNGG 1 cut(s) 149
BseXI GCAGC 2 cut(s) 66, 389
BshFI GGCC 1 cut(s) 189
BslI CCNNNNNNNGG 1 cut(s) 149
BsnI GGCC 1 cut(s) 189
Bsp1407I TGTACA 1 cut(s) 11
Bsp143I GATC 1 cut(s) 303
BspANI GGCC 1 cut(s) 189
BspTI CTTAAG 1 cut(s) 397
BsrGI TGTACA 1 cut(s) 11
BssMI GATC 1 cut(s) 303
Bst4CI ACNGT 2 cut(s) 16, 210
Bst6I CTCTTC 1 cut(s) 324
BstAFI CTTAAG 1 cut(s) 397
BstAUI TGTACA 1 cut(s) 11
BstC8I GCNNGC 1 cut(s) 89
BstEII GGTNACC 1 cut(s) 75
BstKTI GATC 1 cut(s) 306
BstMBI GATC 1 cut(s) 303
BstMWI GCNNNNNNNGC 1 cut(s) 249
BstPI GGTNACC 1 cut(s) 75
BstV1I GCAGC 2 cut(s) 66, 389
BstV2I GAAGAC 2 cut(s) 204, 370
BsuRI GGCC 1 cut(s) 189
Cac8I GCNNGC 1 cut(s) 89
Csp6I GTAC 1 cut(s) 12
CviJI RGCY 9 cut(s) 28, 57, 91, 134, 189, 252, 380, 392, 413
CviKI_1 RGCY 9 cut(s) 28, 57, 91, 134, 189, 252, 380, 392, 413
CviQI GTAC 1 cut(s) 12
DpnI GATC 1 cut(s) 305
DpnII GATC 1 cut(s) 303
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
Eco57I CTGAAG 1 cut(s) 198
Eco91I GGTNACC 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 75
FaiI YATR 2 cut(s) 10, 249
Fnu4HI GCNGC 2 cut(s) 55, 378
Fsp4HI GCNGC 2 cut(s) 55, 378
GluI GCNGC 2 cut(s) 55, 378
HaeIII GGCC 1 cut(s) 189
HinfI GANTC 1 cut(s) 366
HphI GGTGA 1 cut(s) 69
Hpy188I TCNGA 1 cut(s) 303
HpyAV CCTTC 2 cut(s) 62, 66
HpyCH4III ACNGT 2 cut(s) 16, 210
HpyCH4IV ACGT 1 cut(s) 196
HpyCH4V TGCA 5 cut(s) 54, 87, 179, 317, 323
HpyF10VI GCNNNNNNNGC 1 cut(s) 249
HpySE526I ACGT 1 cut(s) 196
Kzo9I GATC 1 cut(s) 303
LpnPI CCDG 2 cut(s) 73, 156
Lsp1109I GCAGC 2 cut(s) 66, 389
MaeII ACGT 1 cut(s) 196
MaeIII GTNAC 2 cut(s) 75, 197
MalI GATC 1 cut(s) 305
MboI GATC 1 cut(s) 303
MboII GAAGA 3 cut(s) 204, 341, 375
MfeI CAATTG 1 cut(s) 324
MluCI AATT 3 cut(s) 30, 265, 324
MlyI GAGTC 1 cut(s) 360
MnlI CCTC 1 cut(s) 179
MseI TTAA 3 cut(s) 116, 294, 398
MslI CAYNNNNRTG 1 cut(s) 195
MspA1I CMGCKG 1 cut(s) 392
MspCI CTTAAG 1 cut(s) 397
MunI CAATTG 1 cut(s) 324
MwoI GCNNNNNNNGC 1 cut(s) 249
NdeII GATC 1 cut(s) 303
NmuCI GTSAC 2 cut(s) 75, 197
OliI CACNNNNGTG 1 cut(s) 195
PkrI GCNGC 2 cut(s) 56, 379
PleI GAGTC 1 cut(s) 360
PpsI GAGTC 1 cut(s) 360
PspEI GGTNACC 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 392
RsaI GTAC 1 cut(s) 13
RsaNI GTAC 1 cut(s) 12
RseI CAYNNNNRTG 1 cut(s) 195
SaqAI TTAA 3 cut(s) 116, 294, 398
SatI GCNGC 2 cut(s) 55, 378
Sau3AI GATC 1 cut(s) 303
SchI GAGTC 1 cut(s) 360
SetI ASST 8 cut(s) 30, 59, 77, 136, 199, 254, 382, 394
SmiMI CAYNNNNRTG 1 cut(s) 195
SmlI CTYRAG 1 cut(s) 397
SmoI CTYRAG 1 cut(s) 397
Sse9I AATT 3 cut(s) 30, 265, 324
TaaI ACNGT 2 cut(s) 16, 210
TaiI ACGT 1 cut(s) 199
TaqI TCGA 1 cut(s) 372
TasI AATT 3 cut(s) 30, 265, 324
TatI WGTACW 1 cut(s) 11
Tru1I TTAA 3 cut(s) 116, 294, 398
Tru9I TTAA 3 cut(s) 116, 294, 398
TseFI GTSAC 2 cut(s) 75, 197
TseI GCWGC 2 cut(s) 54, 377
Tsp45I GTSAC 2 cut(s) 75, 197
Vha464I CTTAAG 1 cut(s) 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.