Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004052

Physical Location & Seq

Genomic Coordinates Forward (+)

14483350 .. 14484182

Gene Structure 833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G167900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 672 bp

ATGGCTGAGCAACACCCCCGCCCACAAGAACACCAAGGCTACCAGACTCAGCACCAGTACGACCAACAACAGCAGCACCAAGGTTTCCAGTACGACGACCAACAGCAACCAAAAGGCTTCCTTCCACAAAATGGTCCCTCTGCCACGCATATTGTAGCAATGCTCACTCTTGTTCCAATCGGCGGCACTCTGCTCTTCCTTTCTGGGCTCACGCTCGCTGGGACGATCCTTGGGCTCGCTGTTTCCACCCCGCTTTTTGTTATCTTCAGCCCCATTTTGGTCCCGGCCGCTTTGGTCATAGGCCTGTCCGTGGTCGGGATCTTAACCTCGGGGGCTTTTGGGATCACGGCCCTCTCGTCTTTTTCTTGGTTGGCCCGTTTTCTGAGTCGGAGTCGGTTGCCGCAGAAAATGGGCCAGAAGGTGCAGGAGACAACGGGGTATTTGGGCCTAAAGGTACAGGAGACGGCGGGCTATTTGGGCCAAAAGATGCAAGAGACTGGAGGCCAGGTGGGCCACTTGTTGCAGGAGACTGGAGGTCAGGTGGGCCAGAAGACTAGAGAAACGGGGCAAAATGTAGATAAGGCCCAGGATGCTGGTAGGGACCAAGAGGGTGGTAGGACCAAAGAAGGTGGCAGGGGGCGTGAAGGTGTTACTGTTACTGTTGAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oleosin

Protein Analysis

224

Amino Acids

23.93

Weight (kDa)

7.03

Isoelectric Point (pI)

39.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01570 AT3G27660 AT3G27660 AT5G40420
fragaria_vesca	FvH4_5g05960 FvH4_6g51310
malus_domestica	MD06G1169100.v1.1 MD09G1028000.v1.1 MD14G1174400.v1.1 MD17G1029500.v1.1
prunus_persica	Prupe.3G290700_v2.0.a1 Prupe.5G167900_v2.0.a1
pyrus_communis	pycom14g14550
rosa_chinensis	RchiOBHm_Chr2g0172931 RchiOBHm_Chr7g0192881
rosa_laevigata	RLG00000004316 RLG00000022143
rosa_multiflora	Rmu_sc0002040.1_g000052 Rmu_sc0029209.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079410 Rroxscaffold_3G00262590
rosa_rugosa	Rorug02G0563700 Rorug07G0005300
rosa_samantha	Rh2AG640500 Rh2BG654100 Rh2CG619600 Rh2DG667600 Rh7AG131000 Rh7BG131800 Rh7CG135100 Rh7DG132900
rosa_wichuraiana	Rw2G052870 Rw7G011170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	131
AciI	CCGC	6 cut(s)	19, 183, 251, 288, 401, 467
AclWI	GGATC	3 cut(s)	220, 326, 350
AcoI	YGGCCR	1 cut(s)	285
AcuI	CTGAAG	1 cut(s)	250
AfaI	GTAC	3 cut(s)	59, 92, 456
AfiI	CCNNNNNNNGG	5 cut(s)	131, 182, 277, 310, 315
AhdI	GACNNNNNGTC	1 cut(s)	534
AjnI	CCWGG	2 cut(s)	504, 585
Alw26I	GTCTC	4 cut(s)	422, 455, 488, 521
AlwI	GGATC	3 cut(s)	220, 326, 350
Ama87I	CYCGRG	1 cut(s)	328
ApeKI	GCWGC	1 cut(s)	73
AsuC2I	CCSGG	1 cut(s)	284
AvaI	CYCGRG	1 cut(s)	328
AvaII	GGWCC	4 cut(s)	134, 280, 601, 618
BanII	GRGCYC	2 cut(s)	210, 237
BbsI	GAAGAC	1 cut(s)	557
BbvI	GCAGC	1 cut(s)	85
BceAI	ACGGC	2 cut(s)	363, 480
BciT130I	CCWGG	2 cut(s)	506, 587
BcnI	CCSGG	1 cut(s)	284
BcoDI	GTCTC	4 cut(s)	422, 455, 488, 521
BfaI	CTAG	1 cut(s)	555
BglI	GCCNNNNNGGC	1 cut(s)	510
BisI	GCNGC	4 cut(s)	74, 184, 288, 401
BlpI	GCTNAGC	1 cut(s)	6
BlsI	GCNGC	4 cut(s)	75, 185, 289, 402
Bme1390I	CCNGG	3 cut(s)	284, 506, 587
Bme18I	GGWCC	4 cut(s)	134, 280, 601, 618
BmeRI	GACNNNNNGTC	1 cut(s)	534
BmeT110I	CYCGRG	1 cut(s)	328
BmiI	GGNNCC	3 cut(s)	136, 282, 602
BmrFI	CCNGG	3 cut(s)	284, 506, 587
BmsI	GCATC	2 cut(s)	477, 580
BpiI	GAAGAC	1 cut(s)	557
BpmI	CTGGAG	2 cut(s)	519, 552
Bpu1102I	GCTNAGC	1 cut(s)	6
BpuMI	CCSGG	1 cut(s)	284
BsaJI	CCNNGG	6 cut(s)	34, 79, 229, 309, 327, 585
BsaXI	ACNNNNNCTCC	4 cut(s)	492, 522, 525, 555
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 182, 277, 310, 315
Bse1I	ACTGG	4 cut(s)	55, 88, 502, 535
Bse3DI	GCAATG	1 cut(s)	165
BseBI	CCWGG	2 cut(s)	506, 587
BseDI	CCNNGG	6 cut(s)	34, 79, 229, 309, 327, 585
BseGI	GGATG	1 cut(s)	595
BseLI	CCNNNNNNNGG	5 cut(s)	131, 182, 277, 310, 315
BseMI	GCAATG	1 cut(s)	165
BseMII	CTCAG	2 cut(s)	62, 374
BseNI	ACTGG	4 cut(s)	55, 88, 502, 535
BseX3I	CGGCCG	1 cut(s)	285
BseXI	GCAGC	1 cut(s)	85
BseYI	CCCAGC	1 cut(s)	218
BsgI	GTGCAG	1 cut(s)	443
Bsh1285I	CGRYCG	1 cut(s)	288
BsiEI	CGRYCG	1 cut(s)	288
BsiHKCI	CYCGRG	1 cut(s)	328
BsiSI	CCGG	1 cut(s)	284
BslFI	GGGAC	4 cut(s)	120, 235, 266, 614
BslI	CCNNNNNNNGG	5 cut(s)	131, 182, 277, 310, 315
BsmAI	GTCTC	4 cut(s)	422, 455, 488, 521
BsmBI	CGTCTC	1 cut(s)	455
BsmFI	GGGAC	4 cut(s)	120, 235, 266, 614
BsoBI	CYCGRG	1 cut(s)	328
Bsp1286I	GDGCHC	2 cut(s)	210, 237
Bsp143I	GATC	3 cut(s)	225, 318, 342
Bsp1720I	GCTNAGC	1 cut(s)	6
BspACI	CCGC	6 cut(s)	19, 183, 251, 288, 401, 467
BspCNI	CTCAG	2 cut(s)	61, 375
BspLI	GGNNCC	3 cut(s)	136, 282, 602
BspPI	GGATC	3 cut(s)	220, 326, 350
BspQI	GCTCTTC	1 cut(s)	200
BsrDI	GCAATG	1 cut(s)	165
BsrI	ACTGG	4 cut(s)	55, 88, 502, 535
BssECI	CCNNGG	6 cut(s)	34, 79, 229, 309, 327, 585
BssMI	GATC	3 cut(s)	225, 318, 342
BssT1I	CCWWGG	3 cut(s)	34, 79, 229
Bst2UI	CCWGG	2 cut(s)	506, 587
Bst4CI	ACNGT	2 cut(s)	655, 661
Bst6I	CTCTTC	1 cut(s)	200
BstC8I	GCNNGC	3 cut(s)	216, 237, 469
BstDEI	CTNAG	3 cut(s)	6, 48, 383
BstDSI	CCRYGG	1 cut(s)	309
BstF5I	GGATG	1 cut(s)	595
BstKTI	GATC	3 cut(s)	228, 321, 345
BstMAI	GTCTC	4 cut(s)	422, 455, 488, 521
BstMBI	GATC	3 cut(s)	225, 318, 342
BstMCI	CGRYCG	1 cut(s)	288
BstMWI	GCNNNNNNNGC	3 cut(s)	477, 510, 590
BstNI	CCWGG	2 cut(s)	506, 587
BstSCI	CCNGG	3 cut(s)	282, 504, 585
BstV1I	GCAGC	1 cut(s)	85
BstV2I	GAAGAC	1 cut(s)	557
BstX2I	RGATCY	1 cut(s)	318
BstXI	CCANNNNNNTGG	2 cut(s)	593, 611
BstYI	RGATCY	1 cut(s)	318
BstZI	CGGCCG	1 cut(s)	285
BtgI	CCRYGG	1 cut(s)	309
BtsCI	GGATG	1 cut(s)	595
Cac8I	GCNNGC	3 cut(s)	216, 237, 469
Csp6I	GTAC	3 cut(s)	58, 91, 455
CspCI	CAANNNNNGTGG	4 cut(s)	133, 168, 610, 645
CviAII	CATG	1 cut(s)	669
CviQI	GTAC	3 cut(s)	58, 91, 455
DdeI	CTNAG	3 cut(s)	6, 48, 383
DpnI	GATC	3 cut(s)	227, 320, 344
DpnII	GATC	3 cut(s)	225, 318, 342
DriI	GACNNNNNGTC	1 cut(s)	534
EaeI	YGGCCR	1 cut(s)	285
EagI	CGGCCG	1 cut(s)	285
Eam1104I	CTCTTC	1 cut(s)	200
Eam1105I	GACNNNNNGTC	1 cut(s)	534
EarI	CTCTTC	1 cut(s)	200
EclXI	CGGCCG	1 cut(s)	285
Eco130I	CCWWGG	3 cut(s)	34, 79, 229
Eco147I	AGGCCT	1 cut(s)	303
Eco24I	GRGCYC	2 cut(s)	210, 237
Eco47I	GGWCC	4 cut(s)	134, 280, 601, 618
Eco52I	CGGCCG	1 cut(s)	285
Eco57I	CTGAAG	1 cut(s)	250
Eco88I	CYCGRG	1 cut(s)	328
EcoRII	CCWGG	2 cut(s)	504, 585
EcoT14I	CCWWGG	3 cut(s)	34, 79, 229
EcoT38I	GRGCYC	2 cut(s)	210, 237
ErhI	CCWWGG	3 cut(s)	34, 79, 229
Esp3I	CGTCTC	1 cut(s)	455
FaeI	CATG	1 cut(s)	672
FaiI	YATR	3 cut(s)	150, 299, 670
FalI	AAGNNNNNCTT	2 cut(s)	105, 137
FaqI	GGGAC	4 cut(s)	120, 235, 266, 614
FatI	CATG	1 cut(s)	668
FauI	CCCGC	3 cut(s)	26, 258, 460
Fnu4HI	GCNGC	4 cut(s)	74, 184, 288, 401
FokI	GGATG	1 cut(s)	602
FriOI	GRGCYC	2 cut(s)	210, 237
Fsp4HI	GCNGC	4 cut(s)	74, 184, 288, 401
FspBI	CTAG	1 cut(s)	555
GluI	GCNGC	4 cut(s)	74, 184, 288, 401
GsaI	CCCAGC	1 cut(s)	222
GsuI	CTGGAG	2 cut(s)	519, 552
HapII	CCGG	1 cut(s)	284
Hin1II	CATG	1 cut(s)	672
HinfI	GANTC	3 cut(s)	46, 385, 391
HpaII	CCGG	1 cut(s)	284
Hpy188I	TCNGA	2 cut(s)	384, 390
Hpy188III	TCNNGA	1 cut(s)	316
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	4 cut(s)	131, 412, 620, 638
HpyCH4III	ACNGT	2 cut(s)	655, 661
HpyCH4V	TGCA	3 cut(s)	424, 490, 523
HpyF10VI	GCNNNNNNNGC	3 cut(s)	477, 510, 590
HpyF3I	CTNAG	3 cut(s)	6, 48, 383
Hsp92II	CATG	1 cut(s)	672
Kzo9I	GATC	3 cut(s)	225, 318, 342
LguI	GCTCTTC	1 cut(s)	200
Lsp1109I	GCAGC	1 cut(s)	85
LweI	GCATC	2 cut(s)	477, 580
MaeI	CTAG	1 cut(s)	555
MaeIII	GTNAC	2 cut(s)	649, 655
MalI	GATC	3 cut(s)	227, 320, 344
MboI	GATC	3 cut(s)	225, 318, 342
MboII	GAAGA	3 cut(s)	187, 256, 562
MflI	RGATCY	1 cut(s)	318
MhlI	GDGCHC	2 cut(s)	210, 237
MlyI	GAGTC	3 cut(s)	40, 394, 400
MmeI	TCCRAC	1 cut(s)	368
MnlI	CCTC	6 cut(s)	148, 337, 362, 494, 527, 601
MseI	TTAA	1 cut(s)	323
MspI	CCGG	1 cut(s)	284
MspR9I	CCNGG	3 cut(s)	284, 506, 587
MvaI	CCWGG	2 cut(s)	506, 587
MwoI	GCNNNNNNNGC	3 cut(s)	477, 510, 590
NciI	CCSGG	1 cut(s)	284
NdeII	GATC	3 cut(s)	225, 318, 342
NlaIII	CATG	1 cut(s)	672
NlaIV	GGNNCC	3 cut(s)	136, 282, 602
PceI	AGGCCT	1 cut(s)	303
PciSI	GCTCTTC	1 cut(s)	200
PcsI	WCGNNNNNNNCGW	1 cut(s)	353
PflMI	CCANNNNNTGG	1 cut(s)	131
PkrI	GCNGC	4 cut(s)	75, 185, 289, 402
PleI	GAGTC	3 cut(s)	40, 393, 399
PpsI	GAGTC	3 cut(s)	40, 393, 399
Psp6I	CCWGG	2 cut(s)	504, 585
PspFI	CCCAGC	1 cut(s)	218
PspGI	CCWGG	2 cut(s)	504, 585
PspN4I	GGNNCC	3 cut(s)	136, 282, 602
PsuI	RGATCY	1 cut(s)	318
RsaI	GTAC	3 cut(s)	59, 92, 456
RsaNI	GTAC	3 cut(s)	58, 91, 455
SapI	GCTCTTC	1 cut(s)	200
SaqAI	TTAA	1 cut(s)	323
SatI	GCNGC	4 cut(s)	74, 184, 288, 401
Sau3AI	GATC	3 cut(s)	225, 318, 342
SchI	GAGTC	3 cut(s)	40, 394, 400
ScrFI	CCNGG	3 cut(s)	284, 506, 587
SduI	GDGCHC	2 cut(s)	210, 237
SetI	ASST	9 cut(s)	85, 329, 423, 456, 510, 538, 543, 631, 649
SfaNI	GCATC	2 cut(s)	477, 580
SfiI	GGCCNNNNNGGCC	1 cut(s)	510
SinI	GGWCC	4 cut(s)	134, 280, 601, 618
SseBI	AGGCCT	1 cut(s)	303
SsiI	CCGC	6 cut(s)	19, 183, 251, 288, 401, 467
SspMI	CTAG	1 cut(s)	555
StuI	AGGCCT	1 cut(s)	303
StyD4I	CCNGG	3 cut(s)	282, 504, 585
StyI	CCWWGG	3 cut(s)	34, 79, 229
TaaI	ACNGT	2 cut(s)	655, 661
TauI	GCSGC	3 cut(s)	186, 290, 403
Tru1I	TTAA	1 cut(s)	323
Tru9I	TTAA	1 cut(s)	323
TseI	GCWGC	1 cut(s)	73
TspGWI	ACGGA	1 cut(s)	298
Van91I	CCANNNNNTGG	1 cut(s)	131
VpaK11BI	GGWCC	4 cut(s)	134, 280, 601, 618
XspI	CTAG	1 cut(s)	555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.