pycom14g14550

Oleosin 16.4 kDa-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0004052
Physical Location & Seq
Forward (+)
17293416 .. 17294048
633 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g14550.1

Sequence Viewer

Length: 633 bp
ATGGCTGATCAGCACCACTACCGCCAGCAGCAACCACAGCACCAAGGTTACCAAAGTCGCATCCAGTTCGACAACCCACAACACCAAGGTTACCAAACTCACTACCAGTATGACCAACAACAACGCTACCCCTTCGAAGTCGGGAAAAGCTTCCGTCCACAAAATGGCTCCTCAGCTTCAAATCTTTTGACAATTGCCACCCTGGTTCCAGTAGGGGGAACTCTGCTCTTGCTTGCAGGGCTCACAATGGCCGGGACCATCATTGGGCTGGCAGTGACCACCCCGCTTTTTGTTATCTTTAGCCCGGTTTTGGTCCTGGCTGTTGTGGTCGTATTCCTATCTGTGACGGGGATATTGACTTCGGGGGCTTTAGGGGTCACGGCCCTATCGTCTTTCTCTTGGTTGGCCCATTACTTGAGCCGGTCTCATCTGCCCCAGACGATGGGCCAAAAGGTGCAGGAGACCACGGGATATTTGGGCCAGAAGGTGCAGGAGACGACGGGATACTTGGGCCAGAAGGTGCAAGAGACAGGAGACTTTGTGGGCCATAAGATGCAGGAGACTGGAGGTCAGGTGGGCCAGATGACTCAGGATGTGGGCGAGACTATCCAGAACAAAGGCCGAGGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oleosin

Protein Analysis

211

Amino Acids

22.91

Weight (kDa)

8.03

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oleosin PF01277 61 - 177 4.1e-31 Oleosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 164, 442
AciI CCGC 2 cut(s) 22, 284
AcoI YGGCCR 1 cut(s) 249
AfiI CCNNNNNNNGG 5 cut(s) 164, 215, 264, 310, 442
AgsI TTSAA 1 cut(s) 180
AhdI GACNNNNNGTC 1 cut(s) 567
AjnI CCWGG 2 cut(s) 201, 315
AluBI AGCT 2 cut(s) 150, 176
AluI AGCT 2 cut(s) 150, 176
Alw26I GTCTC 7 cut(s) 429, 455, 488, 521, 528, 554, 596
AoxI GGCC 9 cut(s) 249, 381, 405, 445, 478, 511, 544, 577, 619
ApeKI GCWGC 1 cut(s) 28
Asp700I GAANNNNTTC 1 cut(s) 149
AspS9I GGNCC 9 cut(s) 255, 313, 382, 406, 445, 478, 511, 544, 577
AsuC2I CCSGG 2 cut(s) 253, 305
AsuII TTCGAA 1 cut(s) 135
AvaII GGWCC 2 cut(s) 255, 313
BanII GRGCYC 1 cut(s) 243
BbvCI CCTCAGC 1 cut(s) 172
BbvI GCAGC 1 cut(s) 40
BccI CCATC 2 cut(s) 266, 436
BceAI ACGGC 1 cut(s) 396
BcgI CGANNNNNNTGC 2 cut(s) 49, 83
BciT130I CCWGG 2 cut(s) 203, 317
BciVI GTATCC 1 cut(s) 497
BclI TGATCA 1 cut(s) 7
BcnI CCSGG 2 cut(s) 253, 305
BcoDI GTCTC 7 cut(s) 429, 455, 488, 521, 528, 554, 596
BfuI GTATCC 1 cut(s) 497
BisI GCNGC 1 cut(s) 29
BlsI GCNGC 1 cut(s) 30
Bme1390I CCNGG 4 cut(s) 203, 253, 305, 317
Bme18I GGWCC 2 cut(s) 255, 313
BmeRI GACNNNNNGTC 1 cut(s) 567
BmgT120I GGNCC 9 cut(s) 255, 313, 382, 406, 445, 478, 511, 544, 577
BmiI GGNNCC 3 cut(s) 169, 207, 256
BmrFI CCNGG 4 cut(s) 203, 253, 305, 317
BmsI GCATC 2 cut(s) 69, 543
BplI GAGNNNNNCTC 2 cut(s) 409, 441
BpmI CTGGAG 1 cut(s) 585
Bpu10I CCTNAGC 1 cut(s) 172
Bpu14I TTCGAA 1 cut(s) 135
BpuEI CTTGAG 1 cut(s) 436
BpuMI CCSGG 2 cut(s) 253, 305
BsaI GGTCTC 2 cut(s) 429, 455
BsaJI CCNNGG 5 cut(s) 43, 85, 201, 465, 622
BsaXI ACNNNNNCTCC 4 cut(s) 525, 555, 558, 588
Bsc4I CCNNNNNNNGG 5 cut(s) 164, 215, 264, 310, 442
Bse118I RCCGGY 1 cut(s) 420
Bse1I ACTGG 4 cut(s) 64, 106, 209, 568
BseBI CCWGG 2 cut(s) 203, 317
BseDI CCNNGG 5 cut(s) 43, 85, 201, 465, 622
BseGI GGATG 2 cut(s) 60, 598
BseLI CCNNNNNNNGG 5 cut(s) 164, 215, 264, 310, 442
BseMII CTCAG 2 cut(s) 186, 602
BseNI ACTGG 4 cut(s) 64, 106, 209, 568
BseRI GAGGAG 1 cut(s) 160
BseXI GCAGC 1 cut(s) 40
BsgI GTGCAG 2 cut(s) 476, 509
BshFI GGCC 9 cut(s) 251, 383, 407, 447, 480, 513, 546, 579, 621
BsiSI CCGG 3 cut(s) 252, 305, 421
BslFI GGGAC 1 cut(s) 268
BslI CCNNNNNNNGG 5 cut(s) 164, 215, 264, 310, 442
BsmAI GTCTC 7 cut(s) 429, 455, 488, 521, 528, 554, 596
BsmBI CGTCTC 1 cut(s) 488
BsmFI GGGAC 1 cut(s) 268
BsnI GGCC 9 cut(s) 251, 383, 407, 447, 480, 513, 546, 579, 621
Bso31I GGTCTC 2 cut(s) 429, 455
Bsp119I TTCGAA 1 cut(s) 135
Bsp1286I GDGCHC 1 cut(s) 243
Bsp143I GATC 1 cut(s) 7
BspACI CCGC 2 cut(s) 22, 284
BspANI GGCC 9 cut(s) 251, 383, 407, 447, 480, 513, 546, 579, 621
BspCNI CTCAG 2 cut(s) 185, 601
BspLI GGNNCC 3 cut(s) 169, 207, 256
BspT104I TTCGAA 1 cut(s) 135
BspTNI GGTCTC 2 cut(s) 429, 455
BsrFI RCCGGY 1 cut(s) 420
BsrI ACTGG 4 cut(s) 64, 106, 209, 568
BssAI RCCGGY 1 cut(s) 420
BssECI CCNNGG 5 cut(s) 43, 85, 201, 465, 622
BssMI GATC 1 cut(s) 7
BssT1I CCWWGG 2 cut(s) 43, 85
Bst2UI CCWGG 2 cut(s) 203, 317
BstBI TTCGAA 1 cut(s) 135
BstC8I GCNNGC 3 cut(s) 26, 234, 270
BstDEI CTNAG 2 cut(s) 172, 588
BstDSI CCRYGG 1 cut(s) 465
BstEII GGTNACC 2 cut(s) 47, 89
BstF5I GGATG 2 cut(s) 60, 598
BstKTI GATC 1 cut(s) 10
BstMAI GTCTC 7 cut(s) 429, 455, 488, 521, 528, 554, 596
BstMBI GATC 1 cut(s) 7
BstMWI GCNNNNNNNGC 2 cut(s) 37, 238
BstNI CCWGG 2 cut(s) 203, 317
BstPI GGTNACC 2 cut(s) 47, 89
BstSCI CCNGG 4 cut(s) 201, 251, 303, 315
BstV1I GCAGC 1 cut(s) 40
BsuI GTATCC 1 cut(s) 497
BsuRI GGCC 9 cut(s) 251, 383, 407, 447, 480, 513, 546, 579, 621
BtgI CCRYGG 1 cut(s) 465
BtsCI GGATG 2 cut(s) 60, 598
BtsI GCAGTG 1 cut(s) 279
BtsIMutI CAGTG 1 cut(s) 279
Cac8I GCNNGC 3 cut(s) 26, 234, 270
Cfr10I RCCGGY 1 cut(s) 420
Cfr13I GGNCC 9 cut(s) 255, 313, 382, 406, 445, 478, 511, 544, 577
DdeI CTNAG 2 cut(s) 172, 588
DpnI GATC 1 cut(s) 9
DpnII GATC 1 cut(s) 7
DriI GACNNNNNGTC 1 cut(s) 567
EaeI YGGCCR 1 cut(s) 249
Eam1105I GACNNNNNGTC 1 cut(s) 567
Eco130I CCWWGG 2 cut(s) 43, 85
Eco24I GRGCYC 1 cut(s) 243
Eco31I GGTCTC 2 cut(s) 429, 455
Eco47I GGWCC 2 cut(s) 255, 313
Eco91I GGTNACC 2 cut(s) 47, 89
EcoO65I GGTNACC 2 cut(s) 47, 89
EcoRII CCWGG 2 cut(s) 201, 315
EcoT14I CCWWGG 2 cut(s) 43, 85
EcoT38I GRGCYC 1 cut(s) 243
ErhI CCWWGG 2 cut(s) 43, 85
Esp3I CGTCTC 1 cut(s) 488
FaiI YATR 2 cut(s) 111, 549
FaqI GGGAC 1 cut(s) 268
FauI CCCGC 1 cut(s) 291
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 1 cut(s) 29
FokI GGATG 2 cut(s) 47, 605
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 1 cut(s) 29
GluI GCNGC 1 cut(s) 29
GsuI CTGGAG 1 cut(s) 585
HaeIII GGCC 9 cut(s) 251, 383, 407, 447, 480, 513, 546, 579, 621
HapII CCGG 3 cut(s) 252, 305, 421
HindIII AAGCTT 1 cut(s) 148
HinfI GANTC 1 cut(s) 586
HpaII CCGG 3 cut(s) 252, 305, 421
Hpy166II GTNNAC 1 cut(s) 158
Hpy188III TCNNGA 3 cut(s) 142, 590, 610
Hpy8I GTNNAC 1 cut(s) 158
Hpy99I CGWCG 1 cut(s) 502
HpyAV CCTTC 3 cut(s) 142, 478, 511
HpyCH4V TGCA 5 cut(s) 236, 457, 490, 523, 556
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 238
HpyF3I CTNAG 2 cut(s) 172, 588
Ksp22I TGATCA 1 cut(s) 7
Kzo9I GATC 1 cut(s) 7
LmnI GCTCC 1 cut(s) 173
Lsp1109I GCAGC 1 cut(s) 40
LweI GCATC 2 cut(s) 69, 543
MaeIII GTNAC 5 cut(s) 47, 89, 274, 343, 376
MalI GATC 1 cut(s) 9
MboI GATC 1 cut(s) 7
MfeI CAATTG 1 cut(s) 192
MhlI GDGCHC 1 cut(s) 243
MluCI AATT 1 cut(s) 192
MlyI GAGTC 1 cut(s) 580
MnlI CCTC 3 cut(s) 181, 560, 617
MroXI GAANNNNTTC 1 cut(s) 149
MspI CCGG 3 cut(s) 252, 305, 421
MspR9I CCNGG 4 cut(s) 203, 253, 305, 317
MunI CAATTG 1 cut(s) 192
MvaI CCWGG 2 cut(s) 203, 317
MwoI GCNNNNNNNGC 2 cut(s) 37, 238
NciI CCSGG 2 cut(s) 253, 305
NdeII GATC 1 cut(s) 7
NlaIV GGNNCC 3 cut(s) 169, 207, 256
NmuCI GTSAC 3 cut(s) 274, 343, 376
NspV TTCGAA 1 cut(s) 135
PcsI WCGNNNNNNNCGW 1 cut(s) 386
PdmI GAANNNNTTC 1 cut(s) 149
PflMI CCANNNNNTGG 2 cut(s) 164, 442
PkrI GCNGC 1 cut(s) 30
PleI GAGTC 1 cut(s) 580
PpsI GAGTC 1 cut(s) 580
Psp6I CCWGG 2 cut(s) 201, 315
PspEI GGTNACC 2 cut(s) 47, 89
PspGI CCWGG 2 cut(s) 201, 315
PspN4I GGNNCC 3 cut(s) 169, 207, 256
PspPI GGNCC 9 cut(s) 255, 313, 382, 406, 445, 478, 511, 544, 577
SatI GCNGC 1 cut(s) 29
Sau3AI GATC 1 cut(s) 7
Sau96I GGNCC 9 cut(s) 255, 313, 382, 406, 445, 478, 511, 544, 577
SchI GAGTC 1 cut(s) 580
ScrFI CCNGG 4 cut(s) 203, 253, 305, 317
SduI GDGCHC 1 cut(s) 243
SetI ASST 9 cut(s) 49, 91, 152, 178, 456, 489, 522, 571, 576
SfaNI GCATC 2 cut(s) 69, 543
SfuI TTCGAA 1 cut(s) 135
SinI GGWCC 2 cut(s) 255, 313
SmlI CTYRAG 1 cut(s) 415
SmoI CTYRAG 1 cut(s) 415
Sse9I AATT 1 cut(s) 192
SsiI CCGC 2 cut(s) 22, 284
StyD4I CCNGG 4 cut(s) 201, 251, 303, 315
StyI CCWWGG 2 cut(s) 43, 85
TaqI TCGA 2 cut(s) 69, 135
TasI AATT 1 cut(s) 192
TscAI CASTG 1 cut(s) 279
TseFI GTSAC 3 cut(s) 274, 343, 376
TseI GCWGC 1 cut(s) 28
Tsp45I GTSAC 3 cut(s) 274, 343, 376
TspGWI ACGGA 1 cut(s) 143
TspRI CASTG 1 cut(s) 279
Van91I CCANNNNNTGG 2 cut(s) 164, 442
VpaK11BI GGWCC 2 cut(s) 255, 313
XcmI CCANNNNNNNNNTGG 2 cut(s) 265, 472
XmnI GAANNNNTTC 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.