Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001912

Physical Location & Seq

Genomic Coordinates Reverse (-)

24460384 .. 24468215

Gene Structure 7832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1169900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3348 bp

ATGGCCGCTGCTTCTTCTTCTTCCTCTTCCGTACGATCATCGTCGTCGTCGACGGCATCTGCGGCAGCAGGGCATACTAATGGCAGTAACAGTACTAGTGGAAGGTCCGAGAGGCAAACGACGTCGTCGGCACAAGTCCCTCCTGCTCACTCCACTAGACAGACGACGTCGTCGGCACAAGTCCCTCCTGCTCACTCCACTAGACAGACGACGTCGTCGTCGCAAGCCAACAGCCACCGCTCGCGGCCTTCTTCTTCCAGTTCACGGCGCTCCGTCACTCCCAATTCGAGAACTCCTCACTCTAACCCCGAATATCAACAAGAGGCCGGAAGAGTGAGGGTCGCTGTCAGGCTTCGACCGAGAAATCTGGAGGATCGCATTTCGGATTCTGATTTCGCAGACAGTGTTGAGCTGCAGCCTGAGCTGAAGCGGCTGAAGTTGAGAAAGAACAATTGGAGTTCAGAGTCTTACAGATTTGATGAAGTTTTTACGGAATCCGCCTCACAAAATCGGGTTTATCAAGTGGTGGCAAAACCTGTAGTTGAGAGTGTGTTGAGTGGATATAATGGGACAGTTATGGCCTATGGCCAAACCGGTACTGGGAAAACTTACACAGTTGGCAGTCTGGGTAGAGATGATGCATCCGAGCGTGGCATTATGGTTAGAGCCTTGGAGGACATACTCTCGACTACGTCTGCCGCTTCTGATAGTGTGGAAGTTTCCTACTTGCAGTTGTACATGGAATCTATTCAAGATTTGCTTGCACCAGAAAAGATTAATATTCCTATTCACGAGGACCCCAAGACTGGTGAGGTGTCACTTCCTGGTGCTTCAGTAGTAAGAATTAAAGACCTTGATCACTTTTTACAACTGCTACAAATTGGTGAGGCAAATCGTCATGCAGCTAACACGAAGCTGAATACAGAATCTTCACGCAGTCATGCGATTCTTATGGTTTTTGTTCGTAGATCTGTGCAAGAAAATGGTGCAGATGAGATCGCTTCTCAAGAAAAAGCCTCTAGAGCTGATTTATCTGTTAGGCATGGTGCACCTATAGTTCGAAAAAGCAAGTTGCTGATTGTCGATCTTGCAGGATCTGAAAGAATAGATAAATCTGGCAGTGAGGGTCACTTGCTCGAGGAGGCAAAATTTATAAATCTTTCACTTACTTCCCTTGGAAAATGTATAAATGCATTGGCGGAAAACAGTCCACATATCCCTATCAGAGATTCTAAGCTTACAAGGTTGCTTCGTGATTCATTTGGAGGCTCTGCGAGGACCTCACTGATAGTAACGATTGGGCCGTCAGCACGACACTATGCAGAGACAACTAGCACGATAATGTTTGGACAAAGGGCAATGAGAATAGTAAACATGGTAAAACTTAAAGAAGAATTTGATTATGAGAGTCTATGTCGGAAGCTTGAGAATCAAGTAGACCATCTTACTGCACAATTAGAAAGGCAACAAAAGTTGTTGGACAGTAACAAATTGGAATTGGAAAGACAGCTGAAAGAGTGTCAAGATTCTTTTGCTGAGGCCAAGAACAATCTAAGCACAAAGTCTCAGTTATTGGAGAAAGAAAATGCTCGTTTGGAGCTGGATCTGAAAGATCTTTTAGATGAGCTGAACTGTCAAAAAGAACACAGTGATCTGATGCATGATAAGGTTGCACAGCTCGAAGCGAGTTTAGAACGTGGAGAGTTTCTGGAAAAGGAAAATACTCGTTTGGAGTTGGATCTGAAAGATCTTTCAGATAAACTGAACCATGAGAAAGAACACAGTAACCTGATGCATGATAAAGTTGCAAAACTTGAAGCAAGTTTAGAACATGGCAAGCAACACCAGCTTGAAAGTTCTATGTATCAGAAAATATTAGCTGATACCACTCAGATGTATGAAGAGAAAATAGCAAAGTTGATTAAGGAGCTTGATGATGAGCGTGCTCGTGCTGAAAGCACAGAGAAACAGTTAGATGAAACAACGAAGCTTCTGACTGATGGCCAAAAGGCTATTCAGCAACATCAGATGGAAAATTCTGCATATCAATCAGCACTGGCAGACACTACTCAGATGTATGAGAAAAAAATAGCTGAGTTAATGGACCAATTGGAAAATGAGCATGCCCGTTTTGAAGATCTAGAAGAGCAGTTGGATGTGGAGAAGAAACGACGTAACCGTCAAAACTCAATGCAGGGGAAGAAAGAGATTGATGAACTTAGAGTGCAGTTAGAAGAAATGAATCAGCTACATGAACAAACTCTAAACAAATATTGGTCCTTGAAATCAGAATGCACTGATCTCTCAGAAGAGAAGGCAAGACTCAAGGAAGAACTTCGAGATGCGAAGCAAAGACTTTTAATTGAAGAGAAGCAGAGGAAGTCTGTAGAGAATGAGCTAATCAAATTAAAGAAGGCTGCACTGGAGAAAAAAGATGAGTTTGAGGACAAGAAGTCGTATATGAAGGAAAATATACATAAAGGGTCCTCTGCGTTTGGGAATCCAATGGGATTACACAATTCGAATCCATCAAGGGATTCAATTTCTGGTCAGAGGGCCACCATTGCAAAAATATGCGAAGAAGTTGGGCTTCAAAAGATCTTACAACTGCTGACATCCGAAGATATAGATGTTCAAACCCATGCTGTGAAGGTGGTTGCCAACCTTGCAGCTGAAGATACTAATCAGGCAAAGATTGTTGAGGAAGGCGGTTTAGATGCTTTGCTTGCGCTGTTGCGATCTTCACAAAATACAACTATCCTTAGAGTTGCTTCTGGGGCCATTGCCAATTTAGCAATGAATGAGGTAAATCAAGGCCTAATTATGAGCAGAGGTGGAGCTCAACTACTCGCAGAGACAGCAAGCAACACAAATGATCCACAAACTCTTAGAATGGTTGCTGGCGCACTCGCTAATTTATGTGGAAATGGATTACATACAATGCTGAAGGAAGATGGAGGAATTAAGGCACTCTTGGGAATGGCAAGGTTGGGGAGTAGTGAAGTCATCGCACAGGTTGCTAGAGGACTGGCTAACTTTGCAAAATGTGAATCGCGCGGAACTATTCAAGGACATAGAAAAGGCCGTTCACTTTTGATGGACGATGGCGCCCTTACCTGGTTGATCATCAACTCCAACACCACGTCAACTTCAATCCAACGCCACATCGAGCTTGCTCTCTGCCATTTAGCGCAAAACGAGGACAATGCAAGGGATTTCATATCCAGTGGAGGGCTTCAAGAGATTATTCAAATATCGGCTGAATCCAGTCGGGACGATATCCGAAACTTGGCGAAGAAGGCGTTGAGAGTGAATCCAAAATTTTACAATCAGATGCATGGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

1116

Amino Acids

123.94

Weight (kDa)

6.16

Isoelectric Point (pI)

43.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	109 - 254	8.1e-19	Microtubule binding
Kinesin	PF00225	117 - 456	1.7e-97	Kinesin motor domain
ARM_ARMC5	PF24768	864 - 1005	6.2e-10	ARMC5
Arm	PF00514	897 - 932	4.4e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001912)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54870 AT3G54870 AT3G54870
fragaria_vesca	FvH4_2g41290 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790
malus_domestica	MD01G1103200.v1.1 MD07G1169900.v1.1
prunus_persica	Prupe.2G208800_v2.0.a1 Prupe.2G208800_v2.0.a1 Prupe.2G208800_v2.0.a1
pyrus_communis	pycom01g12970 pycom07g16380
rosa_chinensis	RchiOBHm_Chr1g0362591 RchiOBHm_Chr3g0488101
rosa_laevigata	RLG00000027636
rosa_multiflora	Rmu_co8281713.1_g000001 Rmu_sc0001716.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043680 Rroxscaffold_2G00076710 Rroxscaffold_3G00218650 Rroxscaffold_4G00293920 Rroxscaffold_4G00293930
rosa_rugosa	Rorug01G0299900.1
rosa_samantha	Rh1AG308500 Rh1BG272200 Rh1CG289400 Rh1DG302600 Rh2AG571000 Rh2BG101900 Rh2CG104300 Rh3AG286300 Rh5AG442000 Rh5BG250100 Rh5BG250200 Rh5BG276500
rosa_wichuraiana	Rw1G008860 Rw1G027400 Rw6G016290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1154
AasI	GACNNNNNNGTC	4 cut(s)	169, 214, 217, 2178
AatII	GACGTC	3 cut(s)	125, 170, 215
AccB1I	GGYRCC	1 cut(s)	3107
AccBSI	CCGCTC	1 cut(s)	240
AccI	GTMKAC	2 cut(s)	50, 1437
AccII	CGCG	3 cut(s)	244, 3055, 3057
AclWI	GGATC	5 cut(s)	381, 1102, 1611, 1746, 2870
AcoI	YGGCCR	3 cut(s)	3, 586, 2002
AcsI	RAATTY	4 cut(s)	1148, 1394, 2035, 3320
AcuI	CTGAAG	5 cut(s)	446, 455, 816, 2694, 2966
AcyI	GRCGYC	4 cut(s)	122, 167, 212, 3108
AfaI	GTAC	4 cut(s)	33, 94, 598, 737
AfiI	CCNNNNNNNGG	6 cut(s)	264, 600, 806, 3117, 3231, 3289
AgeI	ACCGGT	1 cut(s)	593
AhdI	GACNNNNNGTC	1 cut(s)	2452
AhlI	ACTAGT	1 cut(s)	95
AjiI	CACGTC	1 cut(s)	3144
AjnI	CCWGG	2 cut(s)	823, 3116
AjuI	GAANNNNNNNTTGG	4 cut(s)	436, 468, 1998, 2030
Alw21I	GWGCWC	3 cut(s)	1051, 1948, 2842
Alw26I	GTCTC	3 cut(s)	1319, 1569, 2849
Alw44I	GTGCAC	1 cut(s)	1047
AlwI	GGATC	5 cut(s)	381, 1102, 1611, 1746, 2870
AlwNI	CAGNNNCTG	1 cut(s)	1097
Ama87I	CYCGRG	1 cut(s)	1136
ApaLI	GTGCAC	1 cut(s)	1047
ApeKI	GCWGC	7 cut(s)	8, 65, 412, 415, 902, 2417, 2669
ApoI	RAATTY	4 cut(s)	1148, 1394, 2035, 3320
AseI	ATTAAT	1 cut(s)	777
AsiGI	ACCGGT	1 cut(s)	593
Asp700I	GAANNNNTTC	2 cut(s)	747, 2334
AspLEI	GCGC	6 cut(s)	270, 2731, 2906, 3057, 3110, 3193
AspS9I	GGNCC	9 cut(s)	105, 796, 1278, 1301, 2104, 2277, 2484, 2556, 2778
AsuHPI	GGTGA	2 cut(s)	821, 896
AsuII	TTCGAA	2 cut(s)	1060, 2522
AvaI	CYCGRG	1 cut(s)	1136
AvaII	GGWCC	6 cut(s)	105, 796, 1278, 2104, 2277, 2484
BaeGI	GKGCMC	1 cut(s)	1051
BalI	TGGCCA	2 cut(s)	588, 2004
BanI	GGYRCC	1 cut(s)	3107
BanII	GRGCYC	1 cut(s)	2842
BauI	CACGAG	2 cut(s)	791, 1947
Bbv12I	GWGCWC	3 cut(s)	1051, 1948, 2842
BbvCI	CCTCAGC	1 cut(s)	1536
BbvI	GCAGC	6 cut(s)	77, 399, 427, 914, 2404, 2681
BccI	CCATC	7 cut(s)	1449, 1994, 2023, 2536, 2948, 3091, 3098
BceAI	ACGGC	4 cut(s)	69, 281, 1288, 3069
BcgI	CGANNNNNNTGC	2 cut(s)	3188, 3222
BciT130I	CCWGG	2 cut(s)	825, 3118
BclI	TGATCA	2 cut(s)	856, 3123
BcoDI	GTCTC	3 cut(s)	1319, 1569, 2849
BcuI	ACTAGT	1 cut(s)	95
BfaI	CTAG	7 cut(s)	96, 156, 201, 1020, 1332, 2141, 3021
BfmI	CTRYAG	4 cut(s)	413, 537, 1053, 2385
BfoI	RGCGCY	2 cut(s)	271, 3111
BglII	AGATCT	5 cut(s)	968, 1612, 1747, 2137, 2598
BmcAI	AGTACT	1 cut(s)	94
Bme1390I	CCNGG	2 cut(s)	825, 3118
Bme18I	GGWCC	6 cut(s)	105, 796, 1278, 2104, 2277, 2484
BmeRI	GACNNNNNGTC	1 cut(s)	2452
BmeT110I	CYCGRG	1 cut(s)	1136
BmgBI	CACGTC	1 cut(s)	3144
BmgT120I	GGNCC	9 cut(s)	105, 796, 1278, 1301, 2104, 2277, 2484, 2556, 2778
BmiI	GGNNCC	4 cut(s)	798, 2485, 2779, 3109
BmrFI	CCNGG	2 cut(s)	825, 3118
BmrI	ACTGGG	1 cut(s)	609
BmsI	GCATC	8 cut(s)	65, 628, 650, 1647, 1782, 2332, 2707, 3324
BmuI	ACTGGG	1 cut(s)	609
BplI	GAGNNNNNCTC	2 cut(s)	280, 312
BpmI	CTGGAG	2 cut(s)	389, 2444
Bpu10I	CCTNAGC	2 cut(s)	420, 1536
Bpu14I	TTCGAA	2 cut(s)	1060, 2522
BpuEI	CTTGAG	3 cut(s)	990, 1445, 2309
BsaBI	GATNNNNATC	1 cut(s)	2682
BsaHI	GRCGYC	4 cut(s)	122, 167, 212, 3108
BsaJI	CCNNGG	2 cut(s)	669, 1174
BsaWI	WCCGGW	1 cut(s)	593
Bsc4I	CCNNNNNNNGG	6 cut(s)	264, 600, 806, 3117, 3231, 3289
Bse118I	RCCGGY	1 cut(s)	593
Bse1I	ACTGG	8 cut(s)	258, 604, 811, 2061, 2427, 3033, 3225, 3267
Bse3DI	GCAATG	4 cut(s)	1365, 2562, 2781, 2802
Bse8I	GATNNNNATC	1 cut(s)	2682
BseBI	CCWGG	2 cut(s)	825, 3118
BseDI	CCNNGG	2 cut(s)	669, 1174
BseGI	GGATG	3 cut(s)	641, 2161, 2615
BseJI	GATNNNNATC	1 cut(s)	2682
BseLI	CCNNNNNNNGG	6 cut(s)	264, 600, 806, 3117, 3231, 3289
BseMI	GCAATG	4 cut(s)	1365, 2562, 2781, 2802
BseMII	CTCAG	7 cut(s)	411, 1527, 1580, 1904, 2084, 2085, 2319
BseNI	ACTGG	8 cut(s)	258, 604, 811, 2061, 2427, 3033, 3225, 3267
BseRI	GAGGAG	2 cut(s)	285, 1154
BseSI	GKGCMC	1 cut(s)	1051
BseXI	GCAGC	6 cut(s)	77, 399, 427, 914, 2404, 2681
BsgI	GTGCAG	4 cut(s)	1008, 1434, 2246, 2403
Bsh1236I	CGCG	3 cut(s)	244, 3055, 3057
Bsh1285I	CGRYCG	1 cut(s)	359
BshNI	GGYRCC	1 cut(s)	3107
BshTI	ACCGGT	1 cut(s)	593
BsiEI	CGRYCG	1 cut(s)	359
BsiHKAI	GWGCWC	3 cut(s)	1051, 1948, 2842
BsiHKCI	CYCGRG	1 cut(s)	1136
BsiSI	CCGG	2 cut(s)	327, 594
BsiWI	CGTACG	1 cut(s)	31
BslFI	GGGAC	4 cut(s)	122, 167, 583, 3287
BslI	CCNNNNNNNGG	6 cut(s)	264, 600, 806, 3117, 3231, 3289
BsmAI	GTCTC	3 cut(s)	1319, 1569, 2849
BsmFI	GGGAC	4 cut(s)	122, 167, 583, 3287
BsmI	GAATGC	1 cut(s)	2297
BsoBI	CYCGRG	1 cut(s)	1136
Bsp119I	TTCGAA	2 cut(s)	1060, 2522
Bsp1286I	GDGCHC	3 cut(s)	1051, 1948, 2842
Bsp1407I	TGTACA	1 cut(s)	735
BspCNI	CTCAG	7 cut(s)	412, 1528, 1579, 1903, 2083, 2086, 2318
BspFNI	CGCG	3 cut(s)	244, 3055, 3057
BspLI	GGNNCC	4 cut(s)	798, 2485, 2779, 3109
BspMAI	CTGCAG	1 cut(s)	417
BspPI	GGATC	5 cut(s)	381, 1102, 1611, 1746, 2870
BspQI	GCTCTTC	1 cut(s)	2139
BspT104I	TTCGAA	2 cut(s)	1060, 2522
BspT107I	GGYRCC	1 cut(s)	3107
BsrBI	CCGCTC	1 cut(s)	240
BsrDI	GCAATG	4 cut(s)	1365, 2562, 2781, 2802
BsrFI	RCCGGY	1 cut(s)	593
BsrGI	TGTACA	1 cut(s)	735
BsrI	ACTGG	8 cut(s)	258, 604, 811, 2061, 2427, 3033, 3225, 3267
BssAI	RCCGGY	1 cut(s)	593
BssECI	CCNNGG	2 cut(s)	669, 1174
BssNI	GRCGYC	4 cut(s)	122, 167, 212, 3108
BssSI	CACGAG	2 cut(s)	791, 1947
BssT1I	CCWWGG	2 cut(s)	669, 1174
Bst2BI	CACGAG	2 cut(s)	791, 1947
Bst2UI	CCWGG	2 cut(s)	825, 3118
Bst6I	CTCTTC	6 cut(s)	31, 325, 1896, 2139, 2304, 2361
BstACI	GRCGYC	4 cut(s)	122, 167, 212, 3108
BstAPI	GCANNNNNTGC	1 cut(s)	3017
BstAUI	TGTACA	1 cut(s)	735
BstBI	TTCGAA	2 cut(s)	1060, 2522
BstF5I	GGATG	3 cut(s)	641, 2161, 2615
BstFNI	CGCG	3 cut(s)	244, 3055, 3057
BstH2I	RGCGCY	2 cut(s)	271, 3111
BstHHI	GCGC	6 cut(s)	270, 2731, 2906, 3057, 3110, 3193
BstMAI	GTCTC	3 cut(s)	1319, 1569, 2849
BstMCI	CGRYCG	1 cut(s)	359
BstNI	CCWGG	2 cut(s)	825, 3118
BstNSI	RCATGY	1 cut(s)	2126
BstSCI	CCNGG	2 cut(s)	823, 3116
BstSFI	CTRYAG	4 cut(s)	413, 537, 1053, 2385
BstSLI	GKGCMC	1 cut(s)	1051
BstUI	CGCG	3 cut(s)	244, 3055, 3057
BstV1I	GCAGC	6 cut(s)	77, 399, 427, 914, 2404, 2681
BstX2I	RGATCY	8 cut(s)	968, 1094, 1603, 1612, 1738, 1747, 2137, 2598
BstYI	RGATCY	8 cut(s)	968, 1094, 1603, 1612, 1738, 1747, 2137, 2598
BtgZI	GCGATG	1 cut(s)	2992
BtrI	CACGTC	1 cut(s)	3144
BtsCI	GGATG	3 cut(s)	641, 2161, 2615
BtsI	GCAGTG	1 cut(s)	1126
BtsIMutI	CAGTG	8 cut(s)	409, 1126, 1283, 1654, 2054, 2295, 2420, 3232
CaiI	CAGNNNCTG	1 cut(s)	1097
CfoI	GCGC	6 cut(s)	270, 2731, 2906, 3057, 3110, 3193
Cfr10I	RCCGGY	1 cut(s)	593
Cfr13I	GGNCC	9 cut(s)	105, 796, 1278, 1301, 2104, 2277, 2484, 2556, 2778
CsiI	ACCWGGT	1 cut(s)	3116
Csp6I	GTAC	4 cut(s)	32, 93, 597, 736
CspAI	ACCGGT	1 cut(s)	593
CviQI	GTAC	4 cut(s)	32, 93, 597, 736
DinI	GGCGCC	1 cut(s)	3109
DrdI	GACNNNNNNGTC	4 cut(s)	169, 214, 217, 2178
DriI	GACNNNNNGTC	1 cut(s)	2452
DseDI	GACNNNNNNGTC	4 cut(s)	169, 214, 217, 2178
EaeI	YGGCCR	3 cut(s)	3, 586, 2002
Eam1104I	CTCTTC	6 cut(s)	31, 325, 1896, 2139, 2304, 2361
Eam1105I	GACNNNNNGTC	1 cut(s)	2452
EarI	CTCTTC	6 cut(s)	31, 325, 1896, 2139, 2304, 2361
EciI	GGCGGA	2 cut(s)	487, 1214
Ecl136II	GAGCTC	1 cut(s)	2840
Eco130I	CCWWGG	2 cut(s)	669, 1174
Eco147I	AGGCCT	1 cut(s)	2817
Eco24I	GRGCYC	1 cut(s)	2842
Eco32I	GATATC	1 cut(s)	3280
Eco47I	GGWCC	6 cut(s)	105, 796, 1278, 2104, 2277, 2484
Eco53kI	GAGCTC	1 cut(s)	2840
Eco57I	CTGAAG	5 cut(s)	446, 455, 816, 2694, 2966
Eco88I	CYCGRG	1 cut(s)	1136
EcoICRI	GAGCTC	1 cut(s)	2840
EcoO109I	RGGNCCY	3 cut(s)	796, 1278, 2484
EcoRII	CCWGG	2 cut(s)	823, 3116
EcoRV	GATATC	1 cut(s)	3280
EcoT14I	CCWWGG	2 cut(s)	669, 1174
EcoT22I	ATGCAT	5 cut(s)	643, 1195, 1662, 1797, 3339
EcoT38I	GRGCYC	1 cut(s)	2842
EgeI	GGCGCC	1 cut(s)	3109
EheI	GGCGCC	1 cut(s)	3109
ErhI	CCWWGG	2 cut(s)	669, 1174
FalI	AAGNNNNNCTT	6 cut(s)	744, 776, 2574, 2606, 2957, 2989
FaqI	GGGAC	4 cut(s)	122, 167, 583, 3287
FbaI	TGATCA	2 cut(s)	856, 3123
FblI	GTMKAC	2 cut(s)	50, 1437
FokI	GGATG	3 cut(s)	628, 2168, 2602
FriOI	GRGCYC	1 cut(s)	2842
FspBI	CTAG	7 cut(s)	96, 156, 201, 1020, 1332, 2141, 3021
GlaI	GCGC	6 cut(s)	269, 2730, 2905, 3056, 3109, 3192
GsuI	CTGGAG	2 cut(s)	389, 2444
HaeII	RGCGCY	2 cut(s)	271, 3111
HapII	CCGG	2 cut(s)	327, 594
HhaI	GCGC	6 cut(s)	270, 2731, 2906, 3057, 3110, 3193
Hin1I	GRCGYC	4 cut(s)	122, 167, 212, 3108
Hin6I	GCGC	6 cut(s)	268, 2729, 2904, 3055, 3108, 3191
HinP1I	GCGC	6 cut(s)	268, 2729, 2904, 3055, 3108, 3191
HincII	GTYRAC	2 cut(s)	51, 3147
HindII	GTYRAC	2 cut(s)	51, 3147
HindIII	AAGCTT	3 cut(s)	1235, 1421, 1988
HpaII	CCGG	2 cut(s)	327, 594
HphI	GGTGA	2 cut(s)	821, 896
Hpy166II	GTNNAC	8 cut(s)	51, 263, 1049, 1211, 1372, 1438, 3089, 3147
Hpy8I	GTNNAC	8 cut(s)	51, 263, 1049, 1211, 1372, 1438, 3089, 3147
HpyAV	CCTTC	9 cut(s)	96, 258, 2308, 2407, 2458, 2644, 2699, 2941, 3292
HpyCH4IV	ACGT	7 cut(s)	122, 167, 212, 692, 1696, 2173, 3143
HpySE526I	ACGT	7 cut(s)	122, 167, 212, 692, 1696, 2173, 3143
Hsp92I	GRCGYC	4 cut(s)	122, 167, 212, 3108
HspAI	GCGC	6 cut(s)	268, 2729, 2904, 3055, 3108, 3191
KasI	GGCGCC	1 cut(s)	3107
Ksp22I	TGATCA	2 cut(s)	856, 3123
LguI	GCTCTTC	1 cut(s)	2139
LmnI	GCTCC	4 cut(s)	275, 1597, 1927, 2837
Lsp1109I	GCAGC	6 cut(s)	77, 399, 427, 914, 2404, 2681
LweI	GCATC	8 cut(s)	65, 628, 650, 1647, 1782, 2332, 2707, 3324
MabI	ACCWGGT	1 cut(s)	3116
MaeI	CTAG	7 cut(s)	96, 156, 201, 1020, 1332, 2141, 3021
MaeII	ACGT	7 cut(s)	122, 167, 212, 692, 1696, 2173, 3143
MaeIII	GTNAC	8 cut(s)	86, 274, 816, 1127, 1291, 1484, 1784, 2174
MbiI	CCGCTC	1 cut(s)	240
MfeI	CAATTG	2 cut(s)	451, 2108
MflI	RGATCY	8 cut(s)	968, 1094, 1603, 1612, 1738, 1747, 2137, 2598
MhlI	GDGCHC	3 cut(s)	1051, 1948, 2842
MlsI	TGGCCA	2 cut(s)	588, 2004
MluNI	TGGCCA	2 cut(s)	588, 2004
Mly113I	GGCGCC	1 cut(s)	3108
MlyI	GAGTC	3 cut(s)	473, 1417, 2316
MmeI	TCCRAC	6 cut(s)	1397, 1458, 1716, 2133, 3159, 3181
Mox20I	TGGCCA	2 cut(s)	588, 2004
Mph1103I	ATGCAT	5 cut(s)	643, 1195, 1662, 1797, 3339
MroXI	GAANNNNTTC	2 cut(s)	747, 2334
MscI	TGGCCA	2 cut(s)	588, 2004
MseI	TTAA	8 cut(s)	777, 846, 1386, 1923, 2099, 2360, 2408, 2964
MslI	CAYNNNNRTG	3 cut(s)	78, 1340, 1892
Msp20I	TGGCCA	2 cut(s)	588, 2004
MspA1I	CMGCKG	3 cut(s)	8, 1510, 2672
MspI	CCGG	2 cut(s)	327, 594
MspR9I	CCNGG	2 cut(s)	825, 3118
MunI	CAATTG	2 cut(s)	451, 2108
Mva1269I	GAATGC	1 cut(s)	2297
MvaI	CCWGG	2 cut(s)	825, 3118
MvnI	CGCG	3 cut(s)	244, 3055, 3057
NarI	GGCGCC	1 cut(s)	3108
NlaIV	GGNNCC	4 cut(s)	798, 2485, 2779, 3109
NmuCI	GTSAC	3 cut(s)	274, 816, 1127
NsiI	ATGCAT	5 cut(s)	643, 1195, 1662, 1797, 3339
NspI	RCATGY	1 cut(s)	2126
NspV	TTCGAA	2 cut(s)	1060, 2522
PaeI	GCATGC	1 cut(s)	2126
PaeR7I	CTCGAG	1 cut(s)	1136
PceI	AGGCCT	1 cut(s)	2817
PciSI	GCTCTTC	1 cut(s)	2139
PcsI	WCGNNNNNNNCGW	4 cut(s)	47, 215, 1301, 2176
PctI	GAATGC	1 cut(s)	2297
PdmI	GAANNNNTTC	2 cut(s)	747, 2334
Pfl23II	CGTACG	1 cut(s)	31
PflFI	GACNNNGTC	6 cut(s)	124, 166, 169, 211, 214, 691
PinAI	ACCGGT	1 cut(s)	593
PleI	GAGTC	3 cut(s)	472, 1416, 2316
PluTI	GGCGCC	1 cut(s)	3111
PpsI	GAGTC	3 cut(s)	472, 1416, 2316
PpuMI	RGGWCCY	3 cut(s)	796, 1278, 2484
PshBI	ATTAAT	1 cut(s)	777
PsiI	TTATAA	1 cut(s)	1154
Psp124BI	GAGCTC	1 cut(s)	2842
Psp5II	RGGWCCY	3 cut(s)	796, 1278, 2484
Psp6I	CCWGG	2 cut(s)	823, 3116
PspGI	CCWGG	2 cut(s)	823, 3116
PspLI	CGTACG	1 cut(s)	31
PspN4I	GGNNCC	4 cut(s)	798, 2485, 2779, 3109
PspPI	GGNCC	9 cut(s)	105, 796, 1278, 1301, 2104, 2277, 2484, 2556, 2778
PspPPI	RGGWCCY	3 cut(s)	796, 1278, 2484
PspXI	VCTCGAGB	1 cut(s)	1136
PstI	CTGCAG	1 cut(s)	417
PstNI	CAGNNNCTG	1 cut(s)	1097
PsuI	RGATCY	8 cut(s)	968, 1094, 1603, 1612, 1738, 1747, 2137, 2598
PsyI	GACNNNGTC	6 cut(s)	124, 166, 169, 211, 214, 691
PvuII	CAGCTG	2 cut(s)	1510, 2672
RsaI	GTAC	4 cut(s)	33, 94, 598, 737
RsaNI	GTAC	4 cut(s)	32, 93, 597, 736
RseI	CAYNNNNRTG	3 cut(s)	78, 1340, 1892
SacI	GAGCTC	1 cut(s)	2842
SalI	GTCGAC	1 cut(s)	49
SapI	GCTCTTC	1 cut(s)	2139
SaqAI	TTAA	8 cut(s)	777, 846, 1386, 1923, 2099, 2360, 2408, 2964
Sau96I	GGNCC	9 cut(s)	105, 796, 1278, 1301, 2104, 2277, 2484, 2556, 2778
ScaI	AGTACT	1 cut(s)	94
SchI	GAGTC	3 cut(s)	473, 1417, 2316
ScrFI	CCNGG	2 cut(s)	825, 3118
SduI	GDGCHC	3 cut(s)	1051, 1948, 2842
SexAI	ACCWGGT	1 cut(s)	3116
SfaNI	GCATC	8 cut(s)	65, 628, 650, 1647, 1782, 2332, 2707, 3324
SfcI	CTRYAG	4 cut(s)	413, 537, 1053, 2385
SfoI	GGCGCC	1 cut(s)	3109
Sfr274I	CTCGAG	1 cut(s)	1136
SfuI	TTCGAA	2 cut(s)	1060, 2522
SgrDI	CGTCGACG	1 cut(s)	49
SinI	GGWCC	6 cut(s)	105, 796, 1278, 2104, 2277, 2484
SlaI	CTCGAG	1 cut(s)	1136
SmiMI	CAYNNNNRTG	3 cut(s)	78, 1340, 1892
SmlI	CTYRAG	4 cut(s)	1005, 1136, 1424, 2324
SmoI	CTYRAG	4 cut(s)	1005, 1136, 1424, 2324
SpeI	ACTAGT	1 cut(s)	95
SphI	GCATGC	1 cut(s)	2126
SseBI	AGGCCT	1 cut(s)	2817
SspDI	GGCGCC	1 cut(s)	3107
SspI	AATATT	3 cut(s)	781, 1875, 2273
SspMI	CTAG	7 cut(s)	96, 156, 201, 1020, 1332, 2141, 3021
SstI	GAGCTC	1 cut(s)	2842
StuI	AGGCCT	1 cut(s)	2817
StyD4I	CCNGG	2 cut(s)	823, 3116
StyI	CCWWGG	2 cut(s)	669, 1174
TaiI	ACGT	7 cut(s)	125, 170, 215, 695, 1699, 2176, 3146
TaqII	GACCGA	1 cut(s)	373
TatI	WGTACW	2 cut(s)	92, 735
TauI	GCSGC	5 cut(s)	8, 65, 247, 433, 701
Tru1I	TTAA	8 cut(s)	777, 846, 1386, 1923, 2099, 2360, 2408, 2964
Tru9I	TTAA	8 cut(s)	777, 846, 1386, 1923, 2099, 2360, 2408, 2964
TscAI	CASTG	8 cut(s)	409, 1126, 1290, 1654, 2061, 2302, 2427, 3232
TseFI	GTSAC	3 cut(s)	274, 816, 1127
TseI	GCWGC	7 cut(s)	8, 65, 412, 415, 902, 2417, 2669
Tsp45I	GTSAC	3 cut(s)	274, 816, 1127
TspGWI	ACGGA	3 cut(s)	19, 262, 506
TspRI	CASTG	8 cut(s)	409, 1126, 1290, 1654, 2061, 2302, 2427, 3232
Tth111I	GACNNNGTC	6 cut(s)	124, 166, 169, 211, 214, 691
VneI	GTGCAC	1 cut(s)	1047
VpaK11BI	GGWCC	6 cut(s)	105, 796, 1278, 2104, 2277, 2484
VspI	ATTAAT	1 cut(s)	777
XapI	RAATTY	4 cut(s)	1148, 1394, 2035, 3320
XbaI	TCTAGA	2 cut(s)	1019, 2140
XceI	RCATGY	1 cut(s)	2126
XcmI	CCANNNNNNNNNTGG	1 cut(s)	596
XhoI	CTCGAG	1 cut(s)	1136
XmiI	GTMKAC	2 cut(s)	50, 1437
XmnI	GAANNNNTTC	2 cut(s)	747, 2334
XspI	CTAG	7 cut(s)	96, 156, 201, 1020, 1332, 2141, 3021
ZraI	GACGTC	3 cut(s)	123, 168, 213
ZrmI	AGTACT	1 cut(s)	94
Zsp2I	ATGCAT	5 cut(s)	643, 1195, 1662, 1797, 3339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.