Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0001912

Physical Location & Seq

Genomic Coordinates Reverse (-)

13558277 .. 13566196

Gene Structure 7920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g12970.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3300 bp

ATGGCCGCTTCTTCTTCTTCGTCGTCGTCGTCCGTACGATCATCGTCGTCGTCGACGGCAGCAGGGAATACTAATGGCAGTAATAGTACCGGTGGAAGGTCCGAGAGGCAAACGACGTCGTCGGCCCAAGTCCCTCCTACTCACTCCACTAGACAAACGACGTCGTCTTTGCAAGCCAACAGCCACCGCACACGGCCCTCTTCTTCCAGTTCACGGCGCTCCGTCATACCCAGTTCGAGAACTCCTCACTCTAACCCCGAATATCAACAAGAGGCCGGAAGAGTGAGGGTTGCTGTCAGACTTCGACCGAGAAATCTGGAGGATCGCATTTCGGATTCTGATTTCGCAGACATTGTCGAGTTGCAGCCCGAGCTGAAGCGGCTAAAGTTGAGAAAGAACAATTGGAGCTCAGAGTCTTACAGATTTGATGAAGTTTTCACTGAAACCGCCTCGCAAAATCGGGTTTATCAAGTGGTGGCAAAACCTGTAGTTGAGAGTGTGTTGAGTGGATATAATGGAACAGTTATGGCCTATGGCCAAACCGGTACTGGGAAAACTTACACAGTTGGCAGTCTGGGTAATGATGATGCATCCGAGCGTGGCATTATGGTTAGAGCTTTGGAGGACATACTTTCGACTACATCTACTGCTTCTGATAGTGTGGAAGTTTCCTATTTGCAGTTGTACATGGAATCTATTCAAGATTTGCTTGCACCAGAAAAGATTAATATTCCTATTCATGAGGACTCGAAGACTGGTGAGGTGTCACTTCCTGGTGCTTCAGTAGTAAGAATTAAAGACCTTGATCACTTTTTACAACTGCTGCAAATTGGTGAGGCAAACCGTCATGCAGCTAACACGAAGCTGAATACAGAATCTTCACGCAGTCATGCGATTCTTATGGTTTTTGTTCGTAGATCTGTGCAAGAAAATGCTACAGATGAGATCACTTCTCAAGAAAAAGCCTTTAGAGCTGATTTATCAGTTAGAAGTGGGGTACCTGTAGTTCGAAAAAGCAAGTTGCTGATTGTTGATCTTGCAGGATCTGAAAGAATAGATAAATCTGGCAGTGAGGGCCACTTGCTTGAGGAGGCAAAATTTATAAATCTTTCACTTACTTCTCTTGGAAAATGTATAAATGCGTTGGCGGAAAACAGTCCACATATCCCTGTCAGAGATTCTAAGCTTACAAGGTTGCTTCGTGATTCATTTGGAGGCTCTGCGAGGACCTCACTCATAGTAATGATTGGGCTGTCAGCACAGAACTATGCAGAGACCACTAGTACAATAATGTTTGGACAACGGGCAATGAGAATAGTAAATATGGTAAAACTTAAGGAAGAATTTGATTATGAAAGTCAATGTCGGAAGCTTGAGAATCAAGTAGACCATCTTACTGCACAATTTGAAAGGCAACAGAAGTTGTTGGACAGTAACAAATTGGAATTGGAAAGACAGCTGAAGGAGTGTCAAGATTCTTTTGCTGAGGCCAAGAACAATCTAAGCACAAGGTCTGAGTTATTGGAGAAGGAAAATGCTCGTTTGGAGTCGGATCTGAAAGATCTTTTAGATGAGCTGAACTGTCATAAAGGCCACAGTGATTTGATGCATGATAAGGTTGCAAAGCTTGAAGCAAGTTTAGAACATGGAGAGTTTCTGGAGAAGGAAAATACCCGTTTGGAGTTGGATCTGAAAGATCTTTCAGAAAAACTGAACCGTGAGAAAGAACACAGTGACCTGATGCATGATAAAGTTGCAGAACTTGAAGCAAGTTTAGAACACGGCAAGCAACACCAGCTTGAAAGTTCTATGTATCAGAAAGTCTTAGCTGATAGCACTCAGACGTATGAAGAGAAAATAGCAAAGTTGATTAAGCAGCTAGATGGTGAGCGTGCTCGTGCTGAAAGCACAGAGGAACAGTTAGATTTAACAATGAAGCTTCTGATTGATGGCCAACAGACTATTCAGCAACATCAGATAGAGAATTCTGCATTTCAATCAGCACTTGCAGACACTACTCAGATGTATGAGAAAAAAATAGCTGAGTTAATGGAGCAATTGGAAAATGAGTATGCCCGTTTTGAAGATCTAGAAGAACAATTGGAAGTGGAGAAGAAGCAACGTAGTCGGCAAAACTCAATGCAGGGGAAGAAAGAGATTGATGAACTTAGAGTGCAGTTAGAAGAAATGAATCAGCTACATGAACAAACTCTAAACAAATATTGGTCCTTGAAATCAGAATGTGATGATCTCTCAGAAGAGAAGGCAATACTCAAGGAAGAACTTCAAGATGTGAAGCAAAGACTTCTAATTGAAGAGAAGCAGAGGAAGTCTGTAGAGAATGAGCTAATCAAATTAAAGAAGGCTGCACAGGAGAAAGAAGATGAGTTTGAGGACAAGAAGTTGTATATGAAGGAAAAAACACATAAAGGATCTTCTGCTTTGGGGAATCCAATGGGGTTACACAATTCGAATCCATCGAGAGATACAATTTCTGGTCAGAGGGCCACAACTGCAAAAATATGTGAAGAAGTTGGGCTTCAAAAGATCGTACAATTGTTGACATCTGAAGATTCAGATGTCCAAACCCATGCTGTGAAGGTGGTGGCCAATCTTGCAGCTGAAGATACTAATCAGGCAAAGATTGTTGAGGAAGGCGGTTTAGACGCTTTGCTTCTTCTGTTGCAATCCTCACAAAATACAACTATCCTTAGAGTTGCTTCTGGGGCCATTGCCAATTTGGCAATGAATGAGGTAAATCAAGGCGTAATTATGAGCAGAGGCGGAGCTCAACTACTCGCAGAGACAGCAAGCAAGACAAATGATCCACAAACTCTTAGAATGGTTGCTGGTGCACTTGCTAATTTATGTGGAAATGAAAGATTACATACAATGCTCAAAGAAGATGGAGGAATTAAGGCACTCCTGGGGATGGCGAGGTCGGGGAGTAGTGACGTGATCGCACAGGTTGCCAGAGGACTGGCTAACTTTGCAAAATGTGAATCGCGCGGAACTATTCAAGGACATAGAAAAGGTCCTTCACTTTTGATGGACGATGGTGTCCTTACCTGGTTGATTATCAACACCAACACTGCCTCAACTTCAACCCGACGCCATATAGAGCTTGCTCTCTGCCATTTAGCGCAAAACGAGGACAATGCAAGGGATTTCATATCCGGTGGAGGGCTGCAAGAGATCATTCGAATATCGACTGAATCCATTCGGGACGATATCCGAAACTTAGCAAAGAAGGCGTTGAGAGTGAATCCGAAACTTTACAATCAGAGGCGCGGTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

1100

Amino Acids

122.45

Weight (kDa)

5.79

Isoelectric Point (pI)

45.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001912)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54870 AT3G54870 AT3G54870
fragaria_vesca	FvH4_2g41290 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790
malus_domestica	MD01G1103200.v1.1 MD07G1169900.v1.1
prunus_persica	Prupe.2G208800_v2.0.a1 Prupe.2G208800_v2.0.a1 Prupe.2G208800_v2.0.a1
pyrus_communis	pycom01g12970 pycom07g16380
rosa_chinensis	RchiOBHm_Chr1g0362591 RchiOBHm_Chr3g0488101
rosa_laevigata	RLG00000027636
rosa_multiflora	Rmu_co8281713.1_g000001 Rmu_sc0001716.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043680 Rroxscaffold_2G00076710 Rroxscaffold_3G00218650 Rroxscaffold_4G00293920 Rroxscaffold_4G00293930
rosa_rugosa	Rorug01G0299900.1
rosa_samantha	Rh1AG308500 Rh1BG272200 Rh1CG289400 Rh1DG302600 Rh2AG571000 Rh2BG101900 Rh2CG104300 Rh3AG286300 Rh5AG442000 Rh5BG250100 Rh5BG250200 Rh5BG276500
rosa_wichuraiana	Rw1G008860 Rw1G027400 Rw6G016290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1103
AasI	GACNNNNNNGTC	1 cut(s)	3059
AatII	GACGTC	2 cut(s)	119, 164
Acc65I	GGTACC	1 cut(s)	997
AccB1I	GGYRCC	1 cut(s)	997
AccI	GTMKAC	2 cut(s)	53, 1386
AccII	CGCG	3 cut(s)	3007, 3009, 3291
AciI	CCGC	9 cut(s)	6, 187, 379, 447, 1148, 2658, 2784, 3009, 3291
AclWI	GGATC	6 cut(s)	330, 1051, 1560, 1695, 2440, 2819
AcoI	YGGCCR	4 cut(s)	3, 535, 1951, 2607
AcsI	RAATTY	3 cut(s)	1097, 1343, 1984
AcuI	CTGAAG	5 cut(s)	395, 765, 1481, 2589, 2643
AcyI	GRCGYC	3 cut(s)	116, 161, 3112
AfaI	GTAC	7 cut(s)	36, 88, 547, 686, 999, 1285, 2553
AfiI	CCNNNNNNNGG	5 cut(s)	96, 213, 549, 2932, 3183
AflII	CTTAAG	1 cut(s)	1334
AgeI	ACCGGT	2 cut(s)	89, 542
AhlI	ACTAGT	1 cut(s)	1280
AjiI	CACGTC	1 cut(s)	2956
AjnI	CCWGG	3 cut(s)	772, 2925, 3068
AjuI	GAANNNNNNNTTGG	4 cut(s)	385, 417, 1947, 1979
Alw21I	GWGCWC	4 cut(s)	410, 1897, 2791, 2857
Alw26I	GTCTC	2 cut(s)	1268, 2798
Alw44I	GTGCAC	1 cut(s)	2853
AlwI	GGATC	6 cut(s)	330, 1051, 1560, 1695, 2440, 2819
AlwNI	CAGNNNCTG	1 cut(s)	1046
Ama87I	CYCGRG	1 cut(s)	368
ApaLI	GTGCAC	1 cut(s)	2853
ApeKI	GCWGC	8 cut(s)	59, 364, 823, 851, 1876, 2366, 2618, 3187
ApoI	RAATTY	3 cut(s)	1097, 1343, 1984
ArsI	GACNNNNNNTTYG	2 cut(s)	151, 183
AseI	ATTAAT	1 cut(s)	726
AsiGI	ACCGGT	2 cut(s)	89, 542
Asp700I	GAANNNNTTC	3 cut(s)	696, 2283, 3219
Asp718I	GGTACC	1 cut(s)	997
AspLEI	GCGC	4 cut(s)	219, 3009, 3145, 3291
AspS9I	GGNCC	9 cut(s)	99, 124, 195, 1075, 1227, 2226, 2505, 2727, 3035
AsuHPI	GGTGA	3 cut(s)	770, 845, 1898
AsuII	TTCGAA	3 cut(s)	1009, 2471, 3202
AvaI	CYCGRG	1 cut(s)	368
AvaII	GGWCC	4 cut(s)	99, 1227, 2226, 3035
BaeGI	GKGCMC	1 cut(s)	2857
BalI	TGGCCA	3 cut(s)	537, 1953, 2609
BanI	GGYRCC	1 cut(s)	997
BanII	GRGCYC	2 cut(s)	410, 2791
BauI	CACGAG	1 cut(s)	1896
BbsI	GAAGAC	1 cut(s)	758
Bbv12I	GWGCWC	4 cut(s)	410, 1897, 2791, 2857
BbvCI	CCTCAGC	1 cut(s)	1485
BbvI	GCAGC	8 cut(s)	71, 376, 810, 863, 1888, 2353, 2630, 3174
BccI	CCATC	8 cut(s)	1398, 1877, 1943, 2485, 2900, 2926, 3043, 3050
BceAI	ACGGC	4 cut(s)	72, 209, 230, 1798
BcgI	CGANNNNNNTGC	4 cut(s)	2108, 2142, 3140, 3174
BciT130I	CCWGG	3 cut(s)	774, 2927, 3070
BclI	TGATCA	1 cut(s)	805
BcoDI	GTCTC	2 cut(s)	1268, 2798
BcuI	ACTAGT	1 cut(s)	1280
BfaI	CTAG	4 cut(s)	150, 1281, 1880, 2090
BfmI	CTRYAG	4 cut(s)	486, 936, 1002, 2334
BfoI	RGCGCY	1 cut(s)	220
BfrI	CTTAAG	1 cut(s)	1334
BglI	GCCNNNNNGGC	1 cut(s)	2741
BglII	AGATCT	4 cut(s)	917, 1561, 1696, 2086
Bme1390I	CCNGG	3 cut(s)	774, 2927, 3070
Bme18I	GGWCC	4 cut(s)	99, 1227, 2226, 3035
BmeT110I	CYCGRG	1 cut(s)	368
BmgBI	CACGTC	1 cut(s)	2956
BmgT120I	GGNCC	9 cut(s)	99, 124, 195, 1075, 1227, 2226, 2505, 2727, 3035
BmiI	GGNNCC	2 cut(s)	999, 2728
BmrFI	CCNGG	3 cut(s)	774, 2927, 3070
BmrI	ACTGGG	2 cut(s)	225, 558
BmsI	GCATC	4 cut(s)	577, 599, 1596, 1731
BmuI	ACTGGG	2 cut(s)	225, 558
BpiI	GAAGAC	1 cut(s)	758
BplI	GAGNNNNNCTC	2 cut(s)	229, 261
BpmI	CTGGAG	2 cut(s)	338, 1679
Bpu10I	CCTNAGC	1 cut(s)	1485
Bpu14I	TTCGAA	3 cut(s)	1009, 2471, 3202
BpuEI	CTTGAG	4 cut(s)	939, 1106, 1394, 2258
BsaBI	GATNNNNATC	1 cut(s)	2631
BsaHI	GRCGYC	3 cut(s)	116, 161, 3112
BsaI	GGTCTC	1 cut(s)	1268
BsaJI	CCNNGG	1 cut(s)	2926
BsaWI	WCCGGW	3 cut(s)	89, 542, 3176
Bsc4I	CCNNNNNNNGG	5 cut(s)	96, 213, 549, 2932, 3183
Bse118I	RCCGGY	2 cut(s)	89, 542
Bse1I	ACTGG	5 cut(s)	207, 231, 553, 760, 2985
Bse3DI	GCAATG	3 cut(s)	1314, 2730, 2751
Bse8I	GATNNNNATC	1 cut(s)	2631
BseBI	CCWGG	3 cut(s)	774, 2927, 3070
BseDI	CCNNGG	1 cut(s)	2926
BseGI	GGATG	2 cut(s)	590, 2937
BseJI	GATNNNNATC	1 cut(s)	2631
BseLI	CCNNNNNNNGG	5 cut(s)	96, 213, 549, 2932, 3183
BseMI	GCAATG	3 cut(s)	1314, 2730, 2751
BseMII	CTCAG	7 cut(s)	423, 1476, 1506, 1853, 2033, 2034, 2268
BseNI	ACTGG	5 cut(s)	207, 231, 553, 760, 2985
BseRI	GAGGAG	2 cut(s)	234, 1103
BseSI	GKGCMC	1 cut(s)	2857
BseXI	GCAGC	8 cut(s)	71, 376, 810, 863, 1888, 2353, 2630, 3174
BsgI	GTGCAG	3 cut(s)	1383, 2195, 2352
Bsh1236I	CGCG	3 cut(s)	3007, 3009, 3291
Bsh1285I	CGRYCG	1 cut(s)	308
BshNI	GGYRCC	1 cut(s)	997
BshTI	ACCGGT	2 cut(s)	89, 542
BsiEI	CGRYCG	1 cut(s)	308
BsiHKAI	GWGCWC	4 cut(s)	410, 1897, 2791, 2857
BsiHKCI	CYCGRG	1 cut(s)	368
BsiSI	CCGG	4 cut(s)	90, 276, 543, 3177
BsiWI	CGTACG	1 cut(s)	34
BslFI	GGGAC	2 cut(s)	116, 3239
BslI	CCNNNNNNNGG	5 cut(s)	96, 213, 549, 2932, 3183
BsmAI	GTCTC	2 cut(s)	1268, 2798
BsmFI	GGGAC	2 cut(s)	116, 3239
Bso31I	GGTCTC	1 cut(s)	1268
BsoBI	CYCGRG	1 cut(s)	368
Bsp119I	TTCGAA	3 cut(s)	1009, 2471, 3202
Bsp1286I	GDGCHC	4 cut(s)	410, 1897, 2791, 2857
Bsp1407I	TGTACA	1 cut(s)	684
BspACI	CCGC	9 cut(s)	6, 187, 379, 447, 1148, 2658, 2784, 3009, 3291
BspCNI	CTCAG	7 cut(s)	422, 1477, 1507, 1852, 2032, 2035, 2267
BspFNI	CGCG	3 cut(s)	3007, 3009, 3291
BspHI	TCATGA	1 cut(s)	739
BspLI	GGNNCC	2 cut(s)	999, 2728
BspPI	GGATC	6 cut(s)	330, 1051, 1560, 1695, 2440, 2819
BspT104I	TTCGAA	3 cut(s)	1009, 2471, 3202
BspT107I	GGYRCC	1 cut(s)	997
BspTI	CTTAAG	1 cut(s)	1334
BspTNI	GGTCTC	1 cut(s)	1268
BsrDI	GCAATG	3 cut(s)	1314, 2730, 2751
BsrFI	RCCGGY	2 cut(s)	89, 542
BsrGI	TGTACA	1 cut(s)	684
BsrI	ACTGG	5 cut(s)	207, 231, 553, 760, 2985
BssAI	RCCGGY	2 cut(s)	89, 542
BssECI	CCNNGG	1 cut(s)	2926
BssNI	GRCGYC	3 cut(s)	116, 161, 3112
BssSI	CACGAG	1 cut(s)	1896
Bst2BI	CACGAG	1 cut(s)	1896
Bst2UI	CCWGG	3 cut(s)	774, 2927, 3070
Bst6I	CTCTTC	5 cut(s)	205, 274, 1845, 2253, 2310
BstACI	GRCGYC	3 cut(s)	116, 161, 3112
BstAFI	CTTAAG	1 cut(s)	1334
BstAPI	GCANNNNNTGC	1 cut(s)	2969
BstAUI	TGTACA	1 cut(s)	684
BstBI	TTCGAA	3 cut(s)	1009, 2471, 3202
BstC8I	GCNNGC	6 cut(s)	174, 711, 1787, 1893, 2812, 3126
BstF5I	GGATG	2 cut(s)	590, 2937
BstFNI	CGCG	3 cut(s)	3007, 3009, 3291
BstH2I	RGCGCY	1 cut(s)	220
BstHHI	GCGC	4 cut(s)	219, 3009, 3145, 3291
BstMAI	GTCTC	2 cut(s)	1268, 2798
BstMCI	CGRYCG	1 cut(s)	308
BstNI	CCWGG	3 cut(s)	774, 2927, 3070
BstSCI	CCNGG	3 cut(s)	772, 2925, 3068
BstSFI	CTRYAG	4 cut(s)	486, 936, 1002, 2334
BstSLI	GKGCMC	1 cut(s)	2857
BstUI	CGCG	3 cut(s)	3007, 3009, 3291
BstV1I	GCAGC	8 cut(s)	71, 376, 810, 863, 1888, 2353, 2630, 3174
BstV2I	GAAGAC	1 cut(s)	758
BstX2I	RGATCY	8 cut(s)	917, 1043, 1552, 1561, 1687, 1696, 2086, 2432
BstXI	CCANNNNNNTGG	1 cut(s)	2980
BstYI	RGATCY	8 cut(s)	917, 1043, 1552, 1561, 1687, 1696, 2086, 2432
BtrI	CACGTC	1 cut(s)	2956
BtsCI	GGATG	2 cut(s)	590, 2937
BtsI	GCAGTG	2 cut(s)	1075, 3090
BtsIMutI	CAGTG	5 cut(s)	438, 1075, 1603, 1738, 3090
Cac8I	GCNNGC	6 cut(s)	174, 711, 1787, 1893, 2812, 3126
CaiI	CAGNNNCTG	1 cut(s)	1046
CciI	TCATGA	1 cut(s)	739
CfoI	GCGC	4 cut(s)	219, 3009, 3145, 3291
Cfr10I	RCCGGY	2 cut(s)	89, 542
Cfr13I	GGNCC	9 cut(s)	99, 124, 195, 1075, 1227, 2226, 2505, 2727, 3035
CseI	GACGC	2 cut(s)	2675, 3120
CsiI	ACCWGGT	1 cut(s)	3068
Csp6I	GTAC	7 cut(s)	35, 87, 546, 685, 998, 1284, 2552
CspAI	ACCGGT	2 cut(s)	89, 542
CviAII	CATG	9 cut(s)	688, 740, 848, 890, 1610, 1646, 1745, 2201, 2591
CviQI	GTAC	7 cut(s)	35, 87, 546, 685, 998, 1284, 2552
DrdI	GACNNNNNNGTC	1 cut(s)	3059
DseDI	GACNNNNNNGTC	1 cut(s)	3059
EaeI	YGGCCR	4 cut(s)	3, 535, 1951, 2607
Eam1104I	CTCTTC	5 cut(s)	205, 274, 1845, 2253, 2310
EarI	CTCTTC	5 cut(s)	205, 274, 1845, 2253, 2310
EciI	GGCGGA	2 cut(s)	1163, 2799
Ecl136II	GAGCTC	2 cut(s)	408, 2789
Eco24I	GRGCYC	2 cut(s)	410, 2791
Eco31I	GGTCTC	1 cut(s)	1268
Eco32I	GATATC	1 cut(s)	3232
Eco47I	GGWCC	4 cut(s)	99, 1227, 2226, 3035
Eco53kI	GAGCTC	2 cut(s)	408, 2789
Eco57I	CTGAAG	5 cut(s)	395, 765, 1481, 2589, 2643
Eco88I	CYCGRG	1 cut(s)	368
EcoICRI	GAGCTC	2 cut(s)	408, 2789
EcoO109I	RGGNCCY	2 cut(s)	1227, 3035
EcoRI	GAATTC	1 cut(s)	1984
EcoRII	CCWGG	3 cut(s)	772, 2925, 3068
EcoRV	GATATC	1 cut(s)	3232
EcoT22I	ATGCAT	3 cut(s)	592, 1611, 1746
EcoT38I	GRGCYC	2 cut(s)	410, 2791
FaeI	CATG	9 cut(s)	691, 743, 851, 893, 1613, 1649, 1748, 2204, 2594
FalI	AAGNNNNNCTT	4 cut(s)	693, 725, 2523, 2555
FaqI	GGGAC	2 cut(s)	116, 3239
FatI	CATG	9 cut(s)	687, 739, 847, 889, 1609, 1645, 1744, 2200, 2590
FbaI	TGATCA	1 cut(s)	805
FblI	GTMKAC	2 cut(s)	53, 1386
FokI	GGATG	2 cut(s)	577, 2944
FriOI	GRGCYC	2 cut(s)	410, 2791
FspBI	CTAG	4 cut(s)	150, 1281, 1880, 2090
GlaI	GCGC	4 cut(s)	218, 3008, 3144, 3290
GsuI	CTGGAG	2 cut(s)	338, 1679
HaeII	RGCGCY	1 cut(s)	220
HapII	CCGG	4 cut(s)	90, 276, 543, 3177
HgaI	GACGC	2 cut(s)	2675, 3120
HhaI	GCGC	4 cut(s)	219, 3009, 3145, 3291
Hin1I	GRCGYC	3 cut(s)	116, 161, 3112
Hin1II	CATG	9 cut(s)	691, 743, 851, 893, 1613, 1649, 1748, 2204, 2594
Hin6I	GCGC	4 cut(s)	217, 3007, 3143, 3289
HinP1I	GCGC	4 cut(s)	217, 3007, 3143, 3289
HincII	GTYRAC	2 cut(s)	54, 2562
HindII	GTYRAC	2 cut(s)	54, 2562
HindIII	AAGCTT	4 cut(s)	1184, 1370, 1625, 1937
HpaII	CCGG	4 cut(s)	90, 276, 543, 3177
HphI	GGTGA	3 cut(s)	770, 845, 1898
Hpy166II	GTNNAC	6 cut(s)	54, 212, 1160, 1387, 2562, 2855
Hpy8I	GTNNAC	6 cut(s)	54, 212, 1160, 1387, 2562, 2855
HpyCH4IV	ACGT	5 cut(s)	116, 161, 1844, 2122, 2955
HpySE526I	ACGT	5 cut(s)	116, 161, 1844, 2122, 2955
Hsp92I	GRCGYC	3 cut(s)	116, 161, 3112
Hsp92II	CATG	9 cut(s)	691, 743, 851, 893, 1613, 1649, 1748, 2204, 2594
HspAI	GCGC	4 cut(s)	217, 3007, 3143, 3289
KpnI	GGTACC	1 cut(s)	1001
Ksp22I	TGATCA	1 cut(s)	805
LmnI	GCTCC	4 cut(s)	224, 405, 2053, 2786
Lsp1109I	GCAGC	8 cut(s)	71, 376, 810, 863, 1888, 2353, 2630, 3174
LweI	GCATC	4 cut(s)	577, 599, 1596, 1731
MabI	ACCWGGT	1 cut(s)	3068
MaeI	CTAG	4 cut(s)	150, 1281, 1880, 2090
MaeII	ACGT	5 cut(s)	116, 161, 1844, 2122, 2955
MaeIII	GTNAC	5 cut(s)	765, 1433, 1733, 2460, 2951
MfeI	CAATTG	4 cut(s)	400, 2057, 2099, 2555
MflI	RGATCY	8 cut(s)	917, 1043, 1552, 1561, 1687, 1696, 2086, 2432
MhlI	GDGCHC	4 cut(s)	410, 1897, 2791, 2857
MlsI	TGGCCA	3 cut(s)	537, 1953, 2609
MluNI	TGGCCA	3 cut(s)	537, 1953, 2609
MlyI	GAGTC	3 cut(s)	422, 740, 1556
MmeI	TCCRAC	4 cut(s)	1346, 1407, 1530, 1665
Mox20I	TGGCCA	3 cut(s)	537, 1953, 2609
Mph1103I	ATGCAT	3 cut(s)	592, 1611, 1746
MroXI	GAANNNNTTC	3 cut(s)	696, 2283, 3219
MscI	TGGCCA	3 cut(s)	537, 1953, 2609
MseI	TTAA	8 cut(s)	726, 795, 1335, 1872, 1928, 2048, 2357, 2916
MslI	CAYNNNNRTG	1 cut(s)	1241
Msp20I	TGGCCA	3 cut(s)	537, 1953, 2609
MspA1I	CMGCKG	2 cut(s)	1459, 2621
MspCI	CTTAAG	1 cut(s)	1334
MspI	CCGG	4 cut(s)	90, 276, 543, 3177
MspR9I	CCNGG	3 cut(s)	774, 2927, 3070
MunI	CAATTG	4 cut(s)	400, 2057, 2099, 2555
MvaI	CCWGG	3 cut(s)	774, 2927, 3070
MvnI	CGCG	3 cut(s)	3007, 3009, 3291
NlaIII	CATG	9 cut(s)	691, 743, 851, 893, 1613, 1649, 1748, 2204, 2594
NlaIV	GGNNCC	2 cut(s)	999, 2728
NmuCI	GTSAC	3 cut(s)	765, 1733, 2951
NsiI	ATGCAT	3 cut(s)	592, 1611, 1746
NspV	TTCGAA	3 cut(s)	1009, 2471, 3202
PagI	TCATGA	1 cut(s)	739
PcsI	WCGNNNNNNNCGW	3 cut(s)	26, 50, 2477
PdmI	GAANNNNTTC	3 cut(s)	696, 2283, 3219
Pfl23II	CGTACG	1 cut(s)	34
PflFI	GACNNNGTC	3 cut(s)	118, 163, 353
PinAI	ACCGGT	2 cut(s)	89, 542
PleI	GAGTC	3 cut(s)	421, 740, 1555
PpsI	GAGTC	3 cut(s)	421, 740, 1555
PpuMI	RGGWCCY	2 cut(s)	1227, 3035
PshBI	ATTAAT	1 cut(s)	726
PsiI	TTATAA	1 cut(s)	1103
Psp124BI	GAGCTC	2 cut(s)	410, 2791
Psp5II	RGGWCCY	2 cut(s)	1227, 3035
Psp6I	CCWGG	3 cut(s)	772, 2925, 3068
PspGI	CCWGG	3 cut(s)	772, 2925, 3068
PspLI	CGTACG	1 cut(s)	34
PspN4I	GGNNCC	2 cut(s)	999, 2728
PspPI	GGNCC	9 cut(s)	99, 124, 195, 1075, 1227, 2226, 2505, 2727, 3035
PspPPI	RGGWCCY	2 cut(s)	1227, 3035
PsrI	GAACNNNNNNTAC	2 cut(s)	990, 1022
PstNI	CAGNNNCTG	1 cut(s)	1046
PsuI	RGATCY	8 cut(s)	917, 1043, 1552, 1561, 1687, 1696, 2086, 2432
PsyI	GACNNNGTC	3 cut(s)	118, 163, 353
PvuII	CAGCTG	2 cut(s)	1459, 2621
RsaI	GTAC	7 cut(s)	36, 88, 547, 686, 999, 1285, 2553
RsaNI	GTAC	7 cut(s)	35, 87, 546, 685, 998, 1284, 2552
RseI	CAYNNNNRTG	1 cut(s)	1241
SacI	GAGCTC	2 cut(s)	410, 2791
SalI	GTCGAC	1 cut(s)	52
SaqAI	TTAA	8 cut(s)	726, 795, 1335, 1872, 1928, 2048, 2357, 2916
Sau96I	GGNCC	9 cut(s)	99, 124, 195, 1075, 1227, 2226, 2505, 2727, 3035
SchI	GAGTC	3 cut(s)	422, 740, 1556
ScrFI	CCNGG	3 cut(s)	774, 2927, 3070
SduI	GDGCHC	4 cut(s)	410, 1897, 2791, 2857
SexAI	ACCWGGT	1 cut(s)	3068
SfaNI	GCATC	4 cut(s)	577, 599, 1596, 1731
SfcI	CTRYAG	4 cut(s)	486, 936, 1002, 2334
SfuI	TTCGAA	3 cut(s)	1009, 2471, 3202
SgrDI	CGTCGACG	1 cut(s)	52
SinI	GGWCC	4 cut(s)	99, 1227, 2226, 3035
SmiMI	CAYNNNNRTG	1 cut(s)	1241
SmlI	CTYRAG	5 cut(s)	954, 1085, 1334, 1373, 2273
SmoI	CTYRAG	5 cut(s)	954, 1085, 1334, 1373, 2273
SpeI	ACTAGT	1 cut(s)	1280
SsiI	CCGC	9 cut(s)	6, 187, 379, 447, 1148, 2658, 2784, 3009, 3291
SspI	AATATT	2 cut(s)	730, 2222
SspMI	CTAG	4 cut(s)	150, 1281, 1880, 2090
SstI	GAGCTC	2 cut(s)	410, 2791
StyD4I	CCNGG	3 cut(s)	772, 2925, 3068
TaiI	ACGT	5 cut(s)	119, 164, 1847, 2125, 2958
TaqII	GACCGA	1 cut(s)	322
TatI	WGTACW	2 cut(s)	684, 1283
TauI	GCSGC	2 cut(s)	8, 382
Tru1I	TTAA	8 cut(s)	726, 795, 1335, 1872, 1928, 2048, 2357, 2916
Tru9I	TTAA	8 cut(s)	726, 795, 1335, 1872, 1928, 2048, 2357, 2916
TscAI	CASTG	5 cut(s)	445, 1075, 1603, 1738, 3097
TseFI	GTSAC	3 cut(s)	765, 1733, 2951
TseI	GCWGC	8 cut(s)	59, 364, 823, 851, 1876, 2366, 2618, 3187
Tsp45I	GTSAC	3 cut(s)	765, 1733, 2951
TspGWI	ACGGA	2 cut(s)	22, 211
TspRI	CASTG	5 cut(s)	445, 1075, 1603, 1738, 3097
Tth111I	GACNNNGTC	3 cut(s)	118, 163, 353
Vha464I	CTTAAG	1 cut(s)	1334
VneI	GTGCAC	1 cut(s)	2853
VpaK11BI	GGWCC	4 cut(s)	99, 1227, 2226, 3035
VspI	ATTAAT	1 cut(s)	726
XapI	RAATTY	3 cut(s)	1097, 1343, 1984
XbaI	TCTAGA	1 cut(s)	2089
XcmI	CCANNNNNNNNNTGG	2 cut(s)	545, 2737
XmiI	GTMKAC	2 cut(s)	53, 1386
XmnI	GAANNNNTTC	3 cut(s)	696, 2283, 3219
XspI	CTAG	4 cut(s)	150, 1281, 1880, 2090
ZraI	GACGTC	2 cut(s)	117, 162
Zsp2I	ATGCAT	3 cut(s)	592, 1611, 1746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.